TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021175.2.1
(1225 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed r... 257 1e-072
gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stresse... 257 2e-067
gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: L... 251 1e-065
gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDN... 237 1e-061
gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aes... 237 3e-061
gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated se... 232 5e-060
gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring whe... 201 1e-050
gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated... 132 5e-050
gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated se... 87 1e-047
gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized c... 138 1e-044
gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated... 113 3e-035
gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated se... 113 3e-035
gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed r... 68 2e-032
gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: L... 91 2e-032
gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed r... 91 2e-032
gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: L... 91 1e-031
gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stresse... 91 1e-031
gb|CA653991.1|CA653991 wre1n.pk189.f9 wre1n Triticum aestiv... 76 4e-030
gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aest... 61 6e-027
gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aesti... 78 1e-026
gb|CA604179.1|CA604179 wr1.pk0044.c3 wr1 Triticum aestivum ... 118 1e-025
gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aes... 85 2e-023
gb|CK204531.1|CK204531 FGAS013067 Triticum aestivum FGAS: L... 91 4e-023
gb|CA603765.1|CA603765 wr1.pk0032.h2 wr1 Triticum aestivum ... 80 3e-021
>gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2867_E05_I09, mRNA sequence
Length = 597
Score = 257 bits (555), Expect(2) = 1e-072
Identities = 91/124 (73%), Positives = 105/124 (84%)
Frame = +1 / +3
Query: 181 RSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADG 360
R L C N K + C ATC++RCP++C++ CP CKT+CLCDFYPGVSCGDPRFTGADG
Sbjct: 36 RKQVLSCDNPKDGYSPCVATCDSRCPNECIVMCPGCKTYCLCDFYPGVSCGDPRFTGADG 215
Query: 361 NNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQR 540
NNFYFHGKKD+DFC++SDA LHINAHFIGKRNP MSRDFTWIQALGIRFA H LY+ AQ+
Sbjct: 216 NNFYFHGKKDQDFCVLSDADLHINAHFIGKRNPTMSRDFTWIQALGIRFADHRLYMGAQK 395
Query: 541 TPRW 552
T +W
Sbjct: 396 TTKW 407
Score = 177 bits (380), Expect = 3e-043
Identities = 77/96 (80%), Positives = 78/96 (81%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HL V WA *R W AKRMP AWI VKSRLM GLRLPMK ALMWR+ASE QKS SFLPWK
Sbjct: 406 HLVVFWAPM*RRWSAKRMPRAWIHVKSRLMVGLRLPMK*ALMWRSASERTQKSWSFLPWK 227
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQ GH H
Sbjct: 226 *KLLPSAPVKRGSPQDTPG*KSHKQ*VLQPGHMTMH 119
Score = 38.6 bits (78), Expect(2) = 1e-072
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +3
Query: 628 VGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPIT 753
+GA+W P L+ +L+G F I+A VVPIT
Sbjct: 471 IGAKWQSTNVPGLTVMRTTVTNGVRVQLKGVFDIMAKVVPIT 596
>gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_E06_I12, mRNA sequence
Length = 695
Score = 257 bits (555), Expect = 2e-067
Identities = 91/124 (73%), Positives = 105/124 (84%)
Frame = +1 / +3
Query: 181 RSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADG 360
R L C N K + C ATC++RCP++C++ CP CKT+CLCDFYPGVSCGDPRFTGADG
Sbjct: 213 RKQVLSCDNPKDGYSPCVATCDSRCPNECIVMCPGCKTYCLCDFYPGVSCGDPRFTGADG 392
Query: 361 NNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQR 540
NNFYFHGKKD+DFC++SDA LHINAHFIGKRNP MSRDFTWIQALGIRFA H LY+ AQ+
Sbjct: 393 NNFYFHGKKDQDFCVLSDADLHINAHFIGKRNPTMSRDFTWIQALGIRFADHRLYMGAQK 572
Query: 541 TPRW 552
T +W
Sbjct: 573 TTKW 584
Score = 177 bits (380), Expect = 3e-043
Identities = 77/96 (80%), Positives = 78/96 (81%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HL V WA *R W AKRMP AWI VKSRLM GLRLPMK ALMWR+ASE QKS SFLPWK
Sbjct: 583 HLVVFWAPM*RRWSAKRMPRAWIHVKSRLMVGLRLPMK*ALMWRSASERTQKSWSFLPWK 404
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQ GH H
Sbjct: 403 *KLLPSAPVKRGSPQDTPG*KSHKQ*VLQPGHMTMH 296
>gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 251 bits (542), Expect = 1e-065
Identities = 89/124 (71%), Positives = 103/124 (83%)
Frame = +1 / +2
Query: 181 RSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADG 360
R L C + + C ATC+ RCP++C++ CP CKT+C+CDFYPGVSCGDPRFTGADG
Sbjct: 335 REQVLSCDDTTDGNSPCVATCDRRCPNECVVMCPGCKTYCICDFYPGVSCGDPRFTGADG 514
Query: 361 NNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQR 540
NNFYFHGKKD+ FC+VSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFA H LY+ AQ+
Sbjct: 515 NNFYFHGKKDQSFCVVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFADHRLYMGAQK 694
Query: 541 TPRW 552
T +W
Sbjct: 695 TRQW 706
Score = 173 bits (372), Expect = 4e-042
Identities = 76/96 (79%), Positives = 77/96 (80%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H V WA *R W AKRMP AWIQVKSRLMAGLRLPMK ALMWR+ASET QK SFLPWK
Sbjct: 705 H*RVFWAPM*RRWSAKRMPRAWIQVKSRLMAGLRLPMKWALMWRSASETTQKLWSFLPWK 526
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KS Q VLQ GH H
Sbjct: 525 *KLLPSAPVKRGSPQDTPG*KSQMQYVLQPGHMTTH 418
>gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDNA clone A09_p234_plate_14, mRNA
sequence
Length = 526
Score = 237 bits (513), Expect = 1e-061
Identities = 86/122 (70%), Positives = 98/122 (80%)
Frame = +1 / +2
Query: 169 GSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFT 348
G R L C + K + C A C+ RCP++C++ CP CKT+C+CDFYPGVSCGDPRFT
Sbjct: 137 GFGRRDQVLSCDDTKDGNSPCVAHCDKRCPNECVVMCPGCKTYCMCDFYPGVSCGDPRFT 316
Query: 349 GADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYV 528
GADGNNFYFHGKKD+ FC+VSDA L INAHFIGKRNPAMSRDFTWIQALGIRFA H LY+
Sbjct: 317 GADGNNFYFHGKKDQSFCVVSDADLQINAHFIGKRNPAMSRDFTWIQALGIRFADHRLYM 496
Query: 529 AA 534
A
Sbjct: 497 GA 502
Score = 164 bits (353), Expect = 2e-039
Identities = 72/90 (80%), Positives = 74/90 (82%)
Frame = -3 / -2
Query: 533 AAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPS 354
A *R W AKRMP AWIQVKSRLMAGLR PMK AL+WR+ASET QK SFLPWK*KLLPS
Sbjct: 501 APM*RRWSAKRMPRAWIQVKSRLMAGLRFPMKWALIWRSASETTQKLWSFLPWK*KLLPS 322
Query: 353 APVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
APVKRGSPQDTPG*KSH Q VLQ GH H
Sbjct: 321 APVKRGSPQDTPG*KSHMQ*VLQPGHMTTH 232
>gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aestivum cDNA clone AZO2120H03,
mRNA sequence
Length = 704
Score = 237 bits (511), Expect = 3e-061
Identities = 85/131 (64%), Positives = 100/131 (76%)
Frame = +1 / +3
Query: 160 LKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDP 339
+K G R++ CT+ K + C ATC +RCP CL+ CPSC TFCLCDFY G SCGDP
Sbjct: 219 IKPGVGKRNSKFTCTDTKKKRPGCEATCPSRCPKDCLVLCPSCMTFCLCDFYAGASCGDP 398
Query: 340 RFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHH 519
RFTG DGNNFYFHGKK++DFCI+SD LHINAHFIG NPA SRDFTWIQA+G+ FAHH
Sbjct: 399 RFTGGDGNNFYFHGKKNQDFCILSDDDLHINAHFIGNHNPATSRDFTWIQAVGVMFAHHR 578
Query: 520 LYVAAQRTPRW 552
L++ A R+ RW
Sbjct: 579 LHLGAVRSTRW 611
Score = 139 bits (298), Expect = 6e-032
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = -3 / -2
Query: 521 RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVK 342
R W A P+AWIQVKSRL+AGL LPMK ALMWR++SE MQKS FLPWK*KLLPS PVK
Sbjct: 580 RRWWANMTPTAWIQVKSRLVAGLWLPMKWALMWRSSSERMQKSWFFLPWK*KLLPSPPVK 401
Query: 341 RGSPQDTPG*KSHKQNVLQLGHWMR 267
RGSP D P *KSH+Q V+Q G R
Sbjct: 400 RGSPHDAPA*KSHRQKVMQDGQRTR 326
>gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 646
Score = 232 bits (502), Expect = 5e-060
Identities = 82/101 (81%), Positives = 92/101 (91%)
Frame = +1 / +3
Query: 250 RCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHI 429
RCP++C++ CP CKT+C+CDFYPGVSCGDPRFTGADGNNFYFHGKKD+ FC+VSDA LHI
Sbjct: 288 RCPNECIVMCPGCKTYCMCDFYPGVSCGDPRFTGADGNNFYFHGKKDQSFCVVSDADLHI 467
Query: 430 NAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
NAHFIGKRNP MSRDFTWIQALGIRFA H LY+AAQ+T W
Sbjct: 468 NAHFIGKRNPTMSRDFTWIQALGIRFADHRLYMAAQKTVEW 590
Score = 174 bits (375), Expect = 2e-042
Identities = 76/96 (79%), Positives = 77/96 (80%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H V WAA * W AKRMP AWIQVKSRLM GLRLPMK ALMWR+ASET QK SFLPWK
Sbjct: 589 HSTVFWAAM*XRWSAKRMPRAWIQVKSRLMVGLRLPMKWALMWRSASETTQKLWSFLPWK 410
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSH Q VLQ GH H
Sbjct: 409 *KLLPSAPVKRGSPQDTPG*KSHMQ*VLQPGHMTMH 302
>gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3312_D05_H10,
mRNA sequence
Length = 633
Score = 201 bits (434), Expect = 1e-050
Identities = 71/108 (65%), Positives = 82/108 (75%)
Frame = +1 / +2
Query: 229 CSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIV 408
C +C +RCP+KCL C C FC+CD PG SCGDPRFTG DGN FYFHGKKD+DFCIV
Sbjct: 275 CVVSCPSRCPNKCLAYCKYCMAFCVCDLVPGSSCGDPRFTGGDGNTFYFHGKKDQDFCIV 454
Query: 409 SDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
SD ALHINAHFIG NPA+ R+FTWIQA+G+ F H LYV A++ W
Sbjct: 455 SDEALHINAHFIGNHNPAIRRNFTWIQAIGVSFGQHRLYVGARKADVW 598
Score = 135 bits (289), Expect = 1e-030
Identities = 62/92 (67%), Positives = 67/92 (72%)
Frame = -3 / -1
Query: 539 LWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLL 360
L A T*R K P AWI VK RLMAGL LPMK ALMWRA+SETMQKS SFLPWK*K+L
Sbjct: 585 LRAPT*RRCWPKLTPMAWIHVKLRLMAGLWLPMKWALMWRASSETMQKSWSFLPWK*KVL 406
Query: 359 PSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
PS PVKRGSP + PG +SH QN +Q RH
Sbjct: 405 PSPPVKRGSPHELPGTRSHTQNAMQYLQ*ARH 310
>gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 743
Score = 132 bits (283), Expect(3) = 5e-050
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +1 / -3
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D+LAH D+GFKF+ TDDVHGVLGQTYR DYVN L+VT+NMP+MGGA Y+SSD+FSTDC
Sbjct: 447 DSLAHFDIGFKFHAFTDDVHGVLGQTYRTDYVNKLSVTANMPIMGGAASYVSSDIFSTDC 268
Query: 982 AVARFGGRR 1008
VARFG R
Sbjct: 267 KVARFGRSR 241
Score = 99.6 bits (211), Expect(3) = 9e-032
Identities = 48/71 (67%), Positives = 52/71 (73%)
Frame = -3 / +2
Query: 1007 RRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLK 828
R P AT QSVEK SEE * APPM GML VTL LLT*S R VWPSTP TSSV++ NL
Sbjct: 242 RLRPNLATLQSVEKMSEET*LAAPPMMGMLAVTLSLLT*SVRYVWPSTPWTSSVKAWNLN 421
Query: 827 PRSRCARVSPS 795
P S+CAR+S S
Sbjct: 422 PMSKCARLSSS 454
Score = 65.7 bits (137), Expect(3) = 5e-050
Identities = 27/60 (45%), Positives = 34/60 (56%)
Frame = +1 / -3
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
P V A W P L+ +L+G F I+A+VVPIT +DSRIHNYGV E+D
Sbjct: 624 PTEVDAEWQSTIVPTLTITRTSATNGIRVQLKGVFDILANVVPITEKDSRIHNYGVTEED 445
Score = 47.8 bits (98), Expect(3) = 9e-032
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / +2
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SSS+TP*LW+RES +VMGTTLA M P
Sbjct: 446 SSSVTP*LWMRESFSVMGTTLAKMSNTP 529
Score = 40.0 bits (81), Expect(3) = 5e-050
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / -3
Query: 490 ALGIRFAHHHLYVAAQRTPRW 552
ALGIRFA H LY+AAQ+T W
Sbjct: 741 ALGIRFADHRLYMAAQKTVEW 679
Score = 34.1 bits (68), Expect(3) = 9e-032
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 551 HLGVLWAAT*RWWCAKRMPSA 489
H V WAA *R W AKRMP A
Sbjct: 680 HSTVFWAAM*RRWSAKRMPRA 742
>gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0448_d06_h12, mRNA
sequence
Length = 474
Score = 87.2 bits (184), Expect(3) = 1e-047
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1 / +1
Query: 433 AHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
AHFIGKRNP MSRDFTWIQALGIRFA H LY+AAQ+T W
Sbjct: 1 AHFIGKRNPTMSRDFTWIQALGIRFADHRLYMAAQKTAEW 120
Score = 80.3 bits (169), Expect(3) = 1e-047
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNM 924
D+LAH D+GFKF+ TDDVHGVLGQTYR DYVN L+V++NM
Sbjct: 352 DSLAHFDIGFKFHAFTDDVHGVLGQTYRTDYVNKLSVSANM 474
Score = 73.0 bits (153), Expect(3) = 1e-033
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMK 438
H V WAA *R W AKRMP AWIQVKSRLM GLRLPMK
Sbjct: 119 HSAVFWAAM*RRWSAKRMPRAWIQVKSRLMVGLRLPMK 6
Score = 65.7 bits (137), Expect(3) = 1e-033
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -3 / -2
Query: 923 MLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVSPS 795
ML +TL LLT*S R*VWPSTP TSSV++ NL P S+CAR+S S
Sbjct: 473 MLALTLSLLT*SVR*VWPSTPWTSSVKAWNLNPMSKCARLSSS 345
Score = 62.9 bits (131), Expect(3) = 1e-047
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +1 / +1
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
A W P L+ +L+G F I+A+VVPIT +DSRIHNYGV E+D
Sbjct: 190 AEWQSTIVPTLTVTRTSATNGVRVQLKGVFDILANVVPITEKDSRIHNYGVTEED 354
Score = 47.8 bits (98), Expect(3) = 1e-033
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / -2
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SSS+TP*LW+RES +VMGTTLA M P
Sbjct: 353 SSSVTP*LWMRESFSVMGTTLAKMSNTP 270
>gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0815_H07_P13, mRNA sequence
Length = 519
Score = 138 bits (296), Expect(3) = 1e-044
Identities = 50/78 (64%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DGN F FHG++D DFC++SD LHINAHFIGKRN +RDFTW+QALG
Sbjct: 96 GTECYDPRFVGGDGNKFLFHGRRDADFCLLSDTNLHINAHFIGKRNVKAARDFTWVQALG 275
Query: 499 IRFAHHHLYVAAQRTPRW 552
IRF H LY+ +RT W
Sbjct: 276 IRFGGHRLYLGVKRTVTW 329
Score = 93.6 bits (198), Expect(2) = 1e-021
Identities = 45/75 (60%), Positives = 46/75 (61%)
Frame = -3 / -3
Query: 542 VLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KL 363
VL *R W KRMPSA VKSR LRLPMKCALM R SE+ QKS S PWK L
Sbjct: 319 VLLTPR*RRWPPKRMPSACTHVKSRAAFTLRLPMKCALMCRLVSESRQKSASLRPWKRNL 140
Query: 362 LPSAPVKRGSPQDTP 318
LPS P KRGS P
Sbjct: 139 LPSPPTKRGS*HSVP 95
Score = 43.2 bits (88), Expect(3) = 1e-044
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +1 / +3
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPIT 753
A WSP +APALS L G FRIVA+ VP+T
Sbjct: 399 ASWSPASAPALSVFRIGAANGVVVRLDGQFRIVANAVPVT 518
Score = 38.6 bits (78), Expect(3) = 1e-044
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1 / +3
Query: 241 CNARCPHKCLIQCPSCKTFCLCD 309
C A C C + CPSCK C+C+
Sbjct: 21 CPAGCRDLCYVHCPSCKLVCMCE 89
Score = 31.3 bits (62), Expect(2) = 1e-021
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -3 / -3
Query: 752 VMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRA 633
V GT LATMR P TDSAGA G Q A
Sbjct: 517 VTGTALATMRNWPSRRTTTPLAAPMRKTDSAGAEAGLQLA 398
>gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 706
Score = 113 bits (241), Expect(2) = 3e-035
Identities = 43/65 (66%), Positives = 54/65 (83%)
Frame = +1 / -2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D+L HLDLGFKF+ LT+ V GVLGQTY +Y++ +NVT+ MP+MGGAP YLS+ LFSTDC
Sbjct: 468 DSLVHLDLGFKFHTLTNAVDGVLGQTYHSNYISKVNVTAKMPIMGGAPKYLSASLFSTDC 289
Query: 982 AVARF 996
V+RF
Sbjct: 288 TVSRF 274
Score = 84.9 bits (179), Expect(2) = 2e-023
Identities = 41/64 (64%), Positives = 45/64 (70%)
Frame = -3 / +2
Query: 992 RATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRC 813
R T QSVEKR ER GAPP+ G+L VTL LL * *VWPSTP T+ VR NL PRSRC
Sbjct: 278 RETVQSVEKRLAERYLGAPPIMGILAVTLTLLM*FEW*VWPSTPSTAFVRVWNLNPRSRC 457
Query: 812 ARVS 801
R+S
Sbjct: 458 TRLS 469
Score = 57.0 bits (118), Expect(2) = 3e-035
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = +1 / -2
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
A+W P LS EL G F I A+ VPIT EDSRIHNYG E D
Sbjct: 630 AQWVSRAMPGLSVTRTDTVNTVVVELDGVFSISANAVPITDEDSRIHNYGKTEKD 466
Score = 45.5 bits (93), Expect(2) = 2e-023
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = -3 / +2
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAG 657
S S+ P*LWIRESS+VMGT LA M P T+S G
Sbjct: 467 SFSVFP*LWIRESSSVMGTALADMLNTPSSSTTTVFTVSVRVTESPG 607
>gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 612
Score = 113 bits (241), Expect(2) = 3e-035
Identities = 43/65 (66%), Positives = 54/65 (83%)
Frame = +1 / +1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D+L HLDLGFKF+ LT+ V GVLGQTY +Y++ +NVT+ MP+MGGAP YLS+ LFSTDC
Sbjct: 271 DSLVHLDLGFKFHTLTNAVDGVLGQTYHSNYISKVNVTAKMPIMGGAPKYLSASLFSTDC 450
Query: 982 AVARF 996
V+RF
Sbjct: 451 TVSRF 465
Score = 84.9 bits (179), Expect(2) = 2e-023
Identities = 41/64 (64%), Positives = 45/64 (70%)
Frame = -3 / -2
Query: 992 RATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRC 813
R T QSVEKR ER GAPP+ G+L VTL LL * *VWPSTP T+ VR NL PRSRC
Sbjct: 461 RETVQSVEKRLAERYLGAPPIMGILAVTLTLLM*FEW*VWPSTPSTAFVRVWNLNPRSRC 282
Query: 812 ARVS 801
R+S
Sbjct: 281 TRLS 270
Score = 57.0 bits (118), Expect(2) = 3e-035
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = +1 / +1
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
A+W P LS EL G F I A+ VPIT EDSRIHNYG E D
Sbjct: 109 AQWVSRAMPGLSVTRTDTVNTVVVELDGVFSISANAVPITDEDSRIHNYGKTEKD 273
Score = 45.5 bits (93), Expect(2) = 2e-023
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = -3 / -2
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAG 657
S S+ P*LWIRESS+VMGT LA M P T+S G
Sbjct: 272 SFSVFP*LWIRESSSVMGTALADMLNTPSSSTTTVFTVSVRVTESPG 132
>gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H12_O24, mRNA sequence
Length = 775
Score = 68.4 bits (143), Expect(3) = 2e-032
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +1 / +3
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
A WSP +APALS L G FRIVA+ VP+T EDSR+H+YG+ DD
Sbjct: 24 ASWSPASAPALSVFRIGAANGVVVRLDGRFRIVANAVPVTEEDSRVHDYGLTADD 188
Score = 62.9 bits (131), Expect(3) = 2e-032
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1 / +3
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNS 903
D+LAHL++ FKF ++ DVHGVLGQTYRPDYV++
Sbjct: 186 DSLAHLNVAFKFNSISADVHGVLGQTYRPDYVSA 287
Score = 54.7 bits (113), Expect(3) = 4e-021
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / -1
Query: 899 LT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVS 801
LT*SGR*VWPSTPCTS++ NL RCAR+S
Sbjct: 283 LT*SGR*VWPSTPCTSALMELNLNATLRCARLS 185
Score = 49.2 bits (101), Expect(3) = 4e-021
Identities = 26/55 (47%), Positives = 29/55 (52%)
Frame = -3 / -1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRA 633
SS++ P* W ESS+V GT LATMR P TDSAGA G Q A
Sbjct: 187 SSAVRP*SWTLESSSVTGTALATMRNRPSRRTTTPLAAPMRKTDSAGAEAGLQLA 23
Score = 47.8 bits (98), Expect(3) = 2e-032
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 904 LNVTSNMPVMGGAPDYLSSDLFSTDCAVARFGG 1002
+++ + +PVMGGA Y SD+F TDC VARF G
Sbjct: 291 VDMGAKIPVMGGAAKYQVSDIFGTDCEVARFAG 389
Score = 36.3 bits (73), Expect(3) = 4e-021
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3 / -1
Query: 1001 PPKRATAQSVEKRSEER*SGAPPMTGML 918
P KRAT+QSV K S+ APP+TG+L
Sbjct: 388 PAKRATSQSVPKMSDTWYFAAPPITGIL 305
>gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 91.3 bits (193), Expect(3) = 2e-032
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +1
Query: 325 SCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGK 450
+CGDPRF G DGN FYFHG++D DFC+VSD LHINAHFIGK
Sbjct: 448 ACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGK 573
Score = 48.7 bits (100), Expect(3) = 2e-032
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 463 MSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
MSRDFTWIQA+ + F H LY+ A++T W
Sbjct: 589 MSRDFTWIQAIAVLFDGHRLYLGARKTGTW 678
Score = 38.6 bits (78), Expect(3) = 2e-032
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 241 CNARCPHKCLIQCPSCKTFCLCD 309
C A CP C C SCK C+C+
Sbjct: 370 CPANCPQSCYADCKSCKPVCVCN 438
>gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H03_O06, mRNA sequence
Length = 684
Score = 91.3 bits (193), Expect(3) = 2e-032
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +2
Query: 325 SCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGK 450
+CGDPRF G DGN FYFHG++D DFC+VSD LHINAHFIGK
Sbjct: 353 ACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGK 478
Score = 48.7 bits (100), Expect(3) = 2e-032
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 463 MSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
MSRDFTWIQA+ + F H LY+ A++T W
Sbjct: 494 MSRDFTWIQAIAVLFDGHRLYLGARKTGTW 583
Score = 38.6 bits (78), Expect(3) = 2e-032
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 241 CNARCPHKCLIQCPSCKTFCLCD 309
C A CP C C SCK C+C+
Sbjct: 275 CPANCPQSCYADCKSCKPVCVCN 343
>gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 808
Score = 91.3 bits (193), Expect(3) = 1e-031
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +2
Query: 325 SCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGK 450
+CGDPRF G DGN FYFHG++D DFC+VSD LHINAHFIGK
Sbjct: 443 ACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGK 568
Score = 48.7 bits (100), Expect(3) = 1e-031
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 463 MSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
MSRDFTWIQA+ + F H LY+ A++T W
Sbjct: 584 MSRDFTWIQAIAVLFDGHRLYLGARKTGTW 673
Score = 35.9 bits (72), Expect(3) = 1e-031
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 241 CNARCPHKCLIQCPSCKTFCLCD 309
C A CP C C +CK C+C+
Sbjct: 365 CPANCPQSCYPDCNTCKPVCVCN 433
>gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4101_A11_A21, mRNA sequence
Length = 587
Score = 91.3 bits (193), Expect(3) = 1e-031
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +2
Query: 325 SCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGK 450
+CGDPRF G DGN FYFHG++D DFC+VSD LHINAHFIGK
Sbjct: 320 ACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGK 445
Score = 48.7 bits (100), Expect(3) = 1e-031
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 463 MSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
MSRDFTWIQA+ + F H LY+ A++T W
Sbjct: 461 MSRDFTWIQAIAVLFDGHRLYLGARKTGTW 550
Score = 35.9 bits (72), Expect(3) = 1e-031
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 241 CNARCPHKCLIQCPSCKTFCLCD 309
C A CP C C +CK C+C+
Sbjct: 242 CPANCPQSCYPDCNTCKPVCVCN 310
>gb|CA653991.1|CA653991 wre1n.pk189.f9 wre1n Triticum aestivum cDNA clone wre1n.pk189.f9 5'
end, mRNA sequence
Length = 482
Score = 76.2 bits (160), Expect(3) = 4e-030
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +1 / +3
Query: 868 LGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVARF 996
L +TYR DYVN +NVT+ MP+MGGAP YLSS FS DCAV++F
Sbjct: 288 LAKTYRLDYVNKMNVTAKMPIMGGAPKYLSSGXFSKDCAVSKF 416
Score = 50.6 bits (104), Expect(3) = 4e-030
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +1 / +2
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYG 783
ARW T LS +L G F I AS VPIT EDS+IH+YG
Sbjct: 59 ARWVSRTLAGLSVKRTDAVNSVKVDLAGVFSISASAVPITDEDSKIHSYG 208
Score = 44.1 bits (90), Expect(3) = 4e-030
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQ 876
D+L HLDL FKF+ LTD V GVLGQ
Sbjct: 221 DSLVHLDLRFKFHSLTDVVDGVLGQ 295
>gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aestivum cDNA clone
wre1n.pk0080.h10 5' end, mRNA sequence
Length = 488
Score = 61.1 bits (127), Expect(3) = 6e-027
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +1 / +2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNS 903
D+LAHL++ FKF+ ++ DVHGVLGQTYR DYV++
Sbjct: 131 DSLAHLNVAFKFHSISADVHGVLGQTYRSDYVSA 232
Score = 51.5 bits (106), Expect(3) = 6e-027
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 709 LRGAFRIVASVVPITAEDSRIHNYGVREDD 798
L G FRIVA+ VP+T EDSRIH+YG+ DD
Sbjct: 44 LDGQFRIVANAVPVTEEDSRIHDYGLTADD 133
Score = 47.8 bits (98), Expect(3) = 6e-027
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1 / +2
Query: 904 LNVTSNMPVMGGAPDYLSSDLFSTDCAVARFGG 1002
+++ + +PVMGGA Y SD+F TDC VARF G
Sbjct: 236 VDMGAKIPVMGGAAKYQVSDIFGTDCEVARFAG 334
>gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aestivum cDNA clone wre1n.pk0152.e6
5' end, mRNA sequence
Length = 500
Score = 78.0 bits (164), Expect(3) = 1e-026
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1 / +2
Query: 340 RFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGK 450
RF G DGN FYFHG++D DFC+VSD LHINAHFIGK
Sbjct: 2 RFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGK 112
Score = 48.7 bits (100), Expect(3) = 1e-026
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 463 MSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
MSRDFTWIQA+ + F H LY+ A++T W
Sbjct: 128 MSRDFTWIQAIAVLFDGHRLYLGARKTGTW 217
Score = 36.3 bits (73), Expect(3) = 1e-026
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1 / +3
Query: 733 ASVVPITAEDSRIHNYGVREDDGDTL 810
A+ VPI DSR+H YGV DD L
Sbjct: 393 ANAVPINEXDSRVHRYGVTADDARAL 470
>gb|CA604179.1|CA604179 wr1.pk0044.c3 wr1 Triticum aestivum cDNA clone wr1.pk0044.c3 5' end,
mRNA sequence
Length = 571
Score = 118 bits (252), Expect = 1e-025
Identities = 44/67 (65%), Positives = 58/67 (86%)
Frame = +1 / +3
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D+L HLDLGFKF+ LT +V GVLGQTY+P+YV+ +++++ MP+MGGAP YLSS LFSTDC
Sbjct: 33 DSLVHLDLGFKFHSLTKNVDGVLGQTYQPEYVSKVDISAKMPIMGGAPKYLSSSLFSTDC 212
Query: 982 AVARFGG 1002
AV++F G
Sbjct: 213 AVSKFRG 233
>gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aestivum cDNA clone AZO4100L12,
mRNA sequence
Length = 507
Score = 85.4 bits (180), Expect(2) = 2e-023
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 331 GDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGK 450
GDPRF G DGN FYFHG+ D DFC+VSD LHINAHFIGK
Sbjct: 37 GDPRFIGGDGNAFYFHGRTDADFCVVSDRDLHINAHFIGK 156
Score = 45.5 bits (93), Expect(2) = 2e-023
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 463 MSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
MSRDFTWIQA+ F H LY+ A++T W
Sbjct: 172 MSRDFTWIQAIAGLFDGHRLYLGARKTGTW 261
>gb|CK204531.1|CK204531 FGAS013067 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 90.9 bits (192), Expect(2) = 4e-023
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +1 / +3
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKR 453
G C DPRF G DGN F FHG++D DFC++SDA LHINAHFIGKR
Sbjct: 474 GTECYDPRFVGGDGNKFLFHGRRDADFCLLSDAXLHINAHFIGKR 608
Score = 38.6 bits (78), Expect(2) = 4e-023
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1 / +3
Query: 241 CNARCPHKCLIQCPSCKTFCLCD 309
C A C C + CPSCK C+C+
Sbjct: 399 CPAGCRDLCYVHCPSCKLVCMCE 467
>gb|CA603765.1|CA603765 wr1.pk0032.h2 wr1 Triticum aestivum cDNA clone wr1.pk0032.h2 5'
end, mRNA sequence
Length = 224
Score = 80.3 bits (169), Expect(2) = 3e-021
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +1
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNP 459
DPRFTG DGN FYF GKKD+DFCIV D HIN HF G P
Sbjct: 70 DPRFTGGDGNTFYFXGKKDQDFCIVXDKXXHINXHFXGXHXP 195
Score = 43.2 bits (88), Expect(2) = 3e-021
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +3
Query: 268 LIQCPSCKTFCLCDFYPGVSCGDP 339
L C C TFC+CD PG SCG P
Sbjct: 3 LAYCSYCMTFCMCDLXPGQSCGGP 74
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 714,243,926
Number of Sequences: 636343
Number of extensions: 8617137
Number of successful extensions: 71062
Number of sequences better than 1.0e-020: 34
length of database: 122,413,413
effective HSP length: 55
effective length of database: 87,414,548
effective search space used: 30769920896
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)