TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8635788.2.1
(753 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR736849.1|DR736849 FGAS082219 Triticum aestivum FGAS: L... 151 4e-062
gb|DR739237.1|DR739237 FGAS084454 Triticum aestivum FGAS: L... 147 7e-060
gb|CK216481.1|CK216481 FGAS028475 Triticum aestivum FGAS: L... 147 4e-050
gb|CK214212.1|CK214212 FGAS026135 Triticum aestivum FGAS: L... 135 4e-050
gb|CA727856.1|CA727856 wdi1c.pk003.l16 wdi1c Triticum aesti... 142 6e-049
gb|CK208285.1|CK208285 FGAS019986 Triticum aestivum FGAS: L... 139 4e-043
gb|AJ611598.1|AJ611598 AJ611598 Triticum turgidum subsp. du... 123 6e-042
gb|CV760222.1|CV760222 FGAS054606 Triticum aestivum FGAS: L... 122 1e-041
gb|CV776332.1|CV776332 FGAS070736 Triticum aestivum FGAS: L... 121 1e-038
gb|CV762263.1|CV762263 FGAS056652 Triticum aestivum FGAS: L... 122 4e-038
gb|CV763836.1|CV763836 FGAS058219 Triticum aestivum FGAS: L... 116 2e-036
gb|BE518128.1|BE518128 WHE0811_D06_H11ZS Wheat vernalized c... 123 3e-035
gb|DR740618.1|DR740618 FGAS000560 Triticum aestivum FGAS: L... 107 1e-026
gb|AL828487.1|AL828487 AL828487 p:739 Triticum aestivum cDN... 107 2e-022
gb|CA499262.1|CA499262 WHE4005_C10_E19ZT Wheat meiotic anth... 107 2e-022
gb|BT009205.1| Triticum aestivum clone wle1n.pk0037.e9:fis,... 107 2e-022
gb|DR740065.1|DR740065 FGAS084993 Triticum aestivum FGAS: L... 80 5e-021
gb|CV775044.1|CV775044 FGAS069445 Triticum aestivum FGAS: L... 80 5e-021
gb|BU100186.1|BU100186 WHE3316_C04_F08ZS Chinese Spring whe... 80 5e-021
>gb|DR736849.1|DR736849 FGAS082219 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1123
Score = 151 bits (325), Expect(3) = 4e-062
Identities = 63/75 (84%), Positives = 69/75 (92%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
S GGLTVFAPPD+AF+AL +GTLNSLSDQQKTSLVQFHVVS LP AQ +TVSNPLRTQA
Sbjct: 254 SGGGLTVFAPPDNAFTALKSGTLNSLSDQQKTSLVQFHVVSQLLPMAQFDTVSNPLRTQA 433
Query: 463 GDTGRGKYPLNLTAD 507
GDTGRGKYPLN+T+D
Sbjct: 434 GDTGRGKYPLNVTSD 478
Score = 143 bits (307), Expect(3) = 7e-041
Identities = 60/75 (80%), Positives = 63/75 (84%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
S V LSGY PLPVSPACVRSGLLTVS+CA GS+ +TTWNCTSDVFCWSEREL VP SA
Sbjct: 477 SDVTLSGYFPLPVSPACVRSGLLTVSNCAMGSSWETTWNCTSDVFCWSERELRVPDLSAV 298
Query: 326 KALSGGANTVSPPLD 282
KALSGGA TV PP D
Sbjct: 297 KALSGGAKTVRPPPD 253
Score = 74.8 bits (157), Expect(2) = 4e-024
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2 / -2
Query: 314 GGANTVSPPLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVMV 174
G PP + LPLSW+ ICS+S VDCSSWRNLVNCPAL+ A++V
Sbjct: 282 GAKTVRPPPDEALPLSWVSICSSSWVDCSSWRNLVNCPALVSTALIV 142
Score = 74.8 bits (157), Expect(3) = 4e-062
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 172 KTITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNGG 294
KTI A+L+KAGQFTKFLQLLQST+E EQI QLKGK S+GG
Sbjct: 140 KTIKAVLTKAGQFTKFLQLLQSTQEEEQIDTQLKGKASSGG 262
Score = 57.4 bits (119), Expect(2) = 4e-024
Identities = 30/48 (62%), Positives = 31/48 (64%)
Frame = -1 / -1
Query: 510 AVRGEVERVLAPAGVASLRPQRVADXXXXXXXXXXGHDVELHQRRLLL 367
AVR +VERVL PAGVA LR QRVA G VELHQRRLLL
Sbjct: 481 AVRRDVERVLPPAGVAGLRAQRVAHRVELRHGEQLGDHVELHQRRLLL 338
Score = 51.5 bits (106), Expect(3) = 4e-062
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLPWALY 630
LY GDRLVVYQV KVLLPWALY
Sbjct: 536 LYTGDRLVVYQVDKVLLPWALY 601
Score = 40.0 bits (81), Expect(3) = 7e-041
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 630 VERPRQQHLADLVDDEPVPGVKR 562
VERPRQQHL LV +PV GV+R
Sbjct: 601 VERPRQQHLVHLVHHQPVAGVER 533
Score = 23.1 bits (44), Expect(3) = 7e-041
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -1
Query: 561 RGVERGVDDPRGDV 520
R V+ GVDD GDV
Sbjct: 535 RAVDGGVDDAGGDV 494
>gb|DR739237.1|DR739237 FGAS084454 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1164
Score = 147 bits (316), Expect(3) = 7e-060
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
+ GLTVFAPPD+AF+AL +GTLNSLSDQQKTSLVQFHVVS LP AQ +TVSNPLRTQA
Sbjct: 363 TGAGLTVFAPPDNAFTALKSGTLNSLSDQQKTSLVQFHVVSQLLPMAQFDTVSNPLRTQA 542
Query: 463 GDTGRGKYPLNLTAD 507
GDTGRGKYPLN+T+D
Sbjct: 543 GDTGRGKYPLNVTSD 587
Score = 133 bits (286), Expect(4) = 5e-054
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2 / -3
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
S V LSGYLPLPVSPACVRSGLLTVS+CA GS+ +TTWNCTSDVFC SEREL VP SA
Sbjct: 586 SDVTLSGYLPLPVSPACVRSGLLTVSNCAMGSSWETTWNCTSDVFC*SERELRVPDLSAV 407
Query: 326 KALSGGANTVSP 291
KALSGGA TV P
Sbjct: 406 KALSGGAKTVRP 371
Score = 73.5 bits (154), Expect(4) = 5e-054
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -2 / -3
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVMV 174
P++ LPLSW+ ICS+S VDCSSWRNLVNCPAL+ A++V
Sbjct: 367 PVEALPLSWVSICSSSCVDCSSWRNLVNCPALVSTALIV 251
Score = 71.6 bits (150), Expect(3) = 7e-060
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1 / +3
Query: 172 KTITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
KTI A+L+KAGQFTKFLQLLQST+E EQI QLKGK S G
Sbjct: 249 KTIKAVLTKAGQFTKFLQLLQSTQEEEQIDTQLKGKASTG 368
Score = 51.5 bits (106), Expect(3) = 7e-060
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 565 LYAGDRLVVYQVSKVLLPWALY 630
LY GDRLVVYQV KVLLPWALY
Sbjct: 645 LYTGDRLVVYQVDKVLLPWALY 710
Score = 37.3 bits (75), Expect(4) = 5e-054
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 630 VERPRQQHLADLVDDEPVPGVKR 562
VERPRQQHL LV +PV V+R
Sbjct: 710 VERPRQQHLVHLVHHQPVASVER 642
Score = 24.4 bits (47), Expect(4) = 5e-054
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -2
Query: 561 RGVERGVDDPRGDVDAGAVRG 499
R V+ GVDD GDV A G
Sbjct: 644 RAVDGGVDDAGGDVHPPAAIG 582
>gb|CK216481.1|CK216481 FGAS028475 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1063
Score = 147 bits (315), Expect(4) = 4e-050
Identities = 61/72 (84%), Positives = 67/72 (93%)
Frame = +1 / -3
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
GLTVFAPPD+AF+AL +GTLNSLSDQQKTSLVQFHVVS LP AQ +TVSNPLRTQAGDT
Sbjct: 782 GLTVFAPPDNAFTALKSGTLNSLSDQQKTSLVQFHVVSQLLPMAQFDTVSNPLRTQAGDT 603
Query: 472 GRGKYPLNLTAD 507
GRGKYPLN+T+D
Sbjct: 602 GRGKYPLNVTSD 567
Score = 133 bits (286), Expect(5) = 3e-047
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2 / +1
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
S V LSGYLPLPVSPACVRSGLLTVS+CA GS+ +TTWNCTSDVFC SEREL VP SA
Sbjct: 568 SDVTLSGYLPLPVSPACVRSGLLTVSNCAMGSSWETTWNCTSDVFC*SERELRVPDLSAV 747
Query: 326 KALSGGANTVSP 291
KALSGGA TV P
Sbjct: 748 KALSGGAKTVRP 783
Score = 51.5 bits (106), Expect(4) = 4e-050
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -3
Query: 565 LYAGDRLVVYQVSKVLLPWALY 630
LY GDRLVVYQV KVLLPWALY
Sbjct: 509 LYTGDRLVVYQVDKVLLPWALY 444
Score = 40.5 bits (82), Expect(5) = 3e-047
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -2 / +1
Query: 290 PLDGLPLSWLVICSASRVDCSSWR 219
P + LPL+W+ I S+S VDCSSWR
Sbjct: 787 PGEALPLNWVSIWSSSCVDCSSWR 858
Score = 37.3 bits (75), Expect(5) = 3e-047
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 630 VERPRQQHLADLVDDEPVPGVKR 562
VERPRQQHL LV +PV V+R
Sbjct: 444 VERPRQQHLVHLVHHQPVASVER 512
Score = 34.1 bits (68), Expect(4) = 4e-050
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / -3
Query: 220 LQLLQSTREAEQITNQLKGKPSNG 291
LQLLQST+E +Q+ Q +GK S G
Sbjct: 857 LQLLQSTQEEDQMDTQFRGKASPG 786
Score = 27.2 bits (53), Expect(5) = 3e-047
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 218 NLVNCPALLRIA 183
NLVNCPAL+R A
Sbjct: 858 NLVNCPALVRTA 893
Score = 24.4 bits (47), Expect(5) = 3e-047
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / +3
Query: 561 RGVERGVDDPRGDVDAGAVRG 499
R V+ GVDD GDV A G
Sbjct: 510 RAVDGGVDDAGGDVHPPAAIG 572
Score = 23.1 bits (44), Expect(4) = 4e-050
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3 / -3
Query: 132 PGSVGAVPSPRAAQDHHGDPEQGRAVHQ 215
PG R + G +QGRAVHQ
Sbjct: 944 PGGGARRVHRRLPRRDSGGSDQGRAVHQ 861
>gb|CK214212.1|CK214212 FGAS026135 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1050
Score = 135 bits (290), Expect(3) = 4e-050
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
+ GLTVFA PD+AF+ L +GTLNSLSDQQKTSLVQFHVVS LP Q +TVSNP+RTQA
Sbjct: 340 TGAGLTVFALPDNAFTGLKSGTLNSLSDQQKTSLVQFHVVSQLLPMVQFDTVSNPVRTQA 519
Query: 463 GDTGRGKYPLNLTAD 507
GDTGRG YPLN+T+D
Sbjct: 520 GDTGRGNYPLNVTSD 564
Score = 120 bits (257), Expect(4) = 5e-043
Identities = 53/72 (73%), Positives = 57/72 (79%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
S V LSG LPLPVSPACVR+GLLTVS+C GS+ +TTWNCTSDVFC SEREL VP S
Sbjct: 563 SDVTLSG*LPLPVSPACVRTGLLTVSNCTMGSSWETTWNCTSDVFC*SERELRVPDLSPV 384
Query: 326 KALSGGANTVSP 291
KALSG A TV P
Sbjct: 383 KALSGSAKTVRP 348
Score = 58.8 bits (122), Expect(3) = 4e-050
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 172 KTITAILSKAGQFTKFLQLLQSTREAEQITNQLKGK 279
KTI A+L+KAGQFTKFLQLLQST+E EQI +G+
Sbjct: 225 KTIKAVLTKAGQFTKFLQLLQSTQEEEQIDTPAQGQ 332
Score = 56.1 bits (116), Expect(4) = 5e-043
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = -2 / -3
Query: 275 PLSWLVICSASRVDCSSWRNLVNCPALLRIAVMV 174
P + + ICS+S VDCSSWRNLVNCPAL+ A++V
Sbjct: 328 P*AGVSICSSSCVDCSSWRNLVNCPALVSTALIV 227
Score = 43.2 bits (88), Expect(3) = 4e-050
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +1 / +1
Query: 565 LYAGDRLVVYQVSKVLLPWALY 630
LY GDRLVVY V KVLLP ALY
Sbjct: 622 LYTGDRLVVYHVDKVLLPCALY 687
Score = 32.7 bits (65), Expect(4) = 5e-043
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / -1
Query: 630 VERPRQQHLADLVDDEPVPGVKR 562
VER RQQHL +V +PV V+R
Sbjct: 687 VERTRQQHLVHMVHHQPVASVER 619
Score = 22.1 bits (42), Expect(4) = 5e-043
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLV 258
P++ LPLSW V
Sbjct: 344 PVEALPLSWSV 312
>gb|CA727856.1|CA727856 wdi1c.pk003.l16 wdi1c Triticum aestivum cDNA clone wdi1c.pk003.l16
5' end, mRNA sequence
Length = 611
Score = 142 bits (305), Expect(3) = 6e-049
Identities = 59/75 (78%), Positives = 66/75 (88%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
S GLTVFAPPD+AF+AL +G+LNSLSDQQKTSLVQFHVVS LP AQ +TVSNPLRT
Sbjct: 258 SGAGLTVFAPPDNAFTALKSGSLNSLSDQQKTSLVQFHVVSQLLPMAQFDTVSNPLRTXX 437
Query: 463 GDTGRGKYPLNLTAD 507
GDTGRGKYPLN+T+D
Sbjct: 438 GDTGRGKYPLNVTSD 482
Score = 132 bits (282), Expect(3) = 4e-047
Identities = 57/75 (76%), Positives = 60/75 (80%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
S V LSGYLPLPVSP VRSGLLTVS+CA GS+ +TTWNCTSDVFCWSEREL P SA
Sbjct: 481 SDVTLSGYLPLPVSPXXVRSGLLTVSNCAMGSSWETTWNCTSDVFCWSERELREPDLSAV 302
Query: 326 KALSGGANTVSPPLD 282
KALSGGA TV P D
Sbjct: 301 KALSGGAKTVRPAPD 257
Score = 72.1 bits (151), Expect(3) = 6e-049
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1 / +3
Query: 172 KTITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
KTI A+L+KAGQFTKFLQLLQST+E EQI QLKGK S+G
Sbjct: 144 KTIKAVLTKAGQFTKFLQLLQSTQEEEQIDTQLKGKASSG 263
Score = 71.2 bits (149), Expect(3) = 4e-047
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVMV 174
P + LPLSW+ ICS+S VDCSSWRNLVNCPAL+ A++V
Sbjct: 262 PDEALPLSWVSICSSSCVDCSSWRNLVNCPALVSTALIV 146
Score = 24.4 bits (47), Expect(3) = 4e-047
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -1
Query: 561 RGVERGVDDPRGDVDAGAVRG 499
R V+ GVDD GDV A G
Sbjct: 539 RAVDGGVDDAGGDVHPPAAVG 477
Score = 21.7 bits (41), Expect(3) = 6e-049
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / +1
Query: 589 VYQVSKVLLPWAL 627
VY LLPWAL
Sbjct: 565 VYXXDXXLLPWAL 603
>gb|CK208285.1|CK208285 FGAS019986 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1165
Score = 139 bits (299), Expect(3) = 4e-043
Identities = 59/75 (78%), Positives = 65/75 (86%)
Frame = +1 / -3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
S G T APPD+AF+AL +GTLNSLSDQQKTSLVQFHVVS LP AQ +TVSNPLRTQA
Sbjct: 818 SGGVFTFSAPPDNAFTALKSGTLNSLSDQQKTSLVQFHVVSQLLPMAQFDTVSNPLRTQA 639
Query: 463 GDTGRGKYPLNLTAD 507
GDTGRGKYPLN+T+D
Sbjct: 638 GDTGRGKYPLNVTSD 594
Score = 137 bits (294), Expect(3) = 4e-039
Identities = 58/75 (77%), Positives = 61/75 (81%)
Frame = -2 / +1
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
S V LSGY PLPVSPACVRSGLLTVS+CA GS+ +TTWNCTSDVFCWSEREL VP SA
Sbjct: 595 SDVTLSGYFPLPVSPACVRSGLLTVSNCAMGSSWETTWNCTSDVFCWSERELRVPDLSAV 774
Query: 326 KALSGGANTVSPPLD 282
KALSGGA V P D
Sbjct: 775 KALSGGAEKVKTPPD 819
Score = 51.5 bits (106), Expect(3) = 4e-043
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -3
Query: 565 LYAGDRLVVYQVSKVLLPWALY 630
LY GDRLVVYQV KVLLPWALY
Sbjct: 536 LYTGDRLVVYQVDKVLLPWALY 471
Score = 40.0 bits (81), Expect(3) = 4e-039
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -1 / +3
Query: 630 VERPRQQHLADLVDDEPVPGVKR 562
VERPRQQHL LV +PV GV+R
Sbjct: 471 VERPRQQHLVHLVHHQPVAGVER 539
Score = 23.1 bits (44), Expect(3) = 4e-039
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 561 RGVERGVDDPRGDV 520
R V+ GVDD GDV
Sbjct: 537 RAVDGGVDDAGGDV 578
Score = 23.1 bits (44), Expect(3) = 4e-043
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3 / -1
Query: 144 GAVPSPRAAQDHHGDPEQGRAVH 212
GA SP+ Q H PE+G H
Sbjct: 910 GAASSPKFLQLLHPTPEEGPDQH 842
>gb|AJ611598.1|AJ611598 AJ611598 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 05030R, mRNA
sequence
Length = 656
Score = 123 bits (264), Expect(3) = 6e-042
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = +1 / +3
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD QK +L+Q+HV+S A+P +Q +TVSNPLRTQAG +
Sbjct: 321 GMTVFAPTDNAFTSLASGTLNSLSDSQKNALIQYHVLSTAIPMSQFDTVSNPLRTQAGSS 500
Query: 472 GRGKYPLNLTADXXXXXXXXXXXXATLDAT 561
G+YPLN+TA+ AT+D T
Sbjct: 501 SPGQYPLNVTAEGQQXNITTGVVNATVDNT 590
Score = 93.2 bits (197), Expect(3) = 5e-030
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
SAV LSGY P + PACVRSGLLTVS+C G A + TW S F S+ ELSVP S
Sbjct: 535 SAVTLSGYXPGELLPACVRSGLLTVSNCDMGMAVERTWYWMSAFFWLSDSELSVPEASEV 356
Query: 326 KALSGGANTVSP 291
KALS GANTV P
Sbjct: 355 KALSVGANTVMP 320
Score = 47.3 bits (97), Expect(3) = 5e-030
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVM 177
PL L LSWL IC+A+ VD SS ++NCPAL VM
Sbjct: 322 PLPKLLLSWLSICAATPVDLSSRMKVLNCPALASTPVM 209
Score = 46.0 bits (94), Expect(3) = 6e-042
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
IT +L+KAGQF F++LL+ST A QI NQL +G
Sbjct: 210 ITGVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG 323
Score = 40.5 bits (82), Expect(3) = 6e-042
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 565 LYAGDRLVVYQVSKVLLPW 621
LY GD+LVVY V+KVLLPW
Sbjct: 591 LYTGDQLVVYXVNKVLLPW 647
Score = 29.5 bits (58), Expect(3) = 5e-030
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 621 PRQQHLADLVDDEPVPGVKR 562
P Q+HL VDDE V GV+R
Sbjct: 647 PWQEHLVHXVDDELVAGVER 588
>gb|CV760222.1|CV760222 FGAS054606 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 122 bits (262), Expect(3) = 1e-041
Identities = 50/90 (55%), Positives = 66/90 (73%)
Frame = +1 / +2
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD QK +L+Q+HV+S A+P +Q +TVSNPLRTQAG T
Sbjct: 377 GMTVFAPTDNAFTSLASGTLNSLSDSQKNALIQYHVLSTAIPMSQFDTVSNPLRTQAGST 556
Query: 472 GRGKYPLNLTADXXXXXXXXXXXXATLDAT 561
+YPLN+TA+ AT+D T
Sbjct: 557 SPAQYPLNVTAEGQQVNITTGVVNATVDNT 646
Score = 90.4 bits (191), Expect(3) = 3e-030
Identities = 44/72 (61%), Positives = 47/72 (65%)
Frame = -2 / -1
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
SAV LSGY V PACVRSGLLTVS+C G A + TW S F S+ ELSVP S
Sbjct: 591 SAVTLSGYWAGEVLPACVRSGLLTVSNCDMGMAVERTWYWMSAFFWLSDSELSVPEASEV 412
Query: 326 KALSGGANTVSP 291
KALS GANTV P
Sbjct: 411 KALSVGANTVMP 376
Score = 47.3 bits (97), Expect(3) = 3e-030
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVM 177
PL L LSWL IC+A+ VD SS ++NCPAL VM
Sbjct: 378 PLPKLLLSWLSICAATPVDLSSRMKVLNCPALASTPVM 265
Score = 46.0 bits (94), Expect(3) = 1e-041
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
IT +L+KAGQF F++LL+ST A QI NQL +G
Sbjct: 266 ITGVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG 379
Score = 40.5 bits (82), Expect(3) = 1e-041
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLPWAL 627
LY GD+LVVYQV+KVLLP A+
Sbjct: 647 LYTGDQLVVYQVNKVLLPMAI 709
Score = 33.1 bits (66), Expect(3) = 3e-030
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 615 QQHLADLVDDEPVPGVKR 562
Q+HL DLVDDE V GV+R
Sbjct: 697 QEHLVDLVDDELVAGVER 644
>gb|CV776332.1|CV776332 FGAS070736 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 121 bits (258), Expect(3) = 1e-038
Identities = 49/90 (54%), Positives = 66/90 (73%)
Frame = +1 / +3
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD QK +L+Q+HV+S A+P +Q +TVSNPLRTQAG T
Sbjct: 396 GMTVFAPTDNAFTSLASGTLNSLSDSQKNALIQYHVLSTAIPMSQFDTVSNPLRTQAGST 575
Query: 472 GRGKYPLNLTADXXXXXXXXXXXXATLDAT 561
+YPLN+TA+ AT++ T
Sbjct: 576 SPAQYPLNVTAEGQQVNITTGVVNATVEHT 665
Score = 90.4 bits (191), Expect(2) = 9e-026
Identities = 44/72 (61%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
SAV LSGY V PACVRSGLLTVS+C G A + TW S F S+ ELSVP S
Sbjct: 610 SAVTLSGYWAGEVLPACVRSGLLTVSNCDMGMAVERTWYWMSAFFWLSDSELSVPEASEV 431
Query: 326 KALSGGANTVSP 291
KALS GANTV P
Sbjct: 430 KALSVGANTVMP 395
Score = 47.3 bits (97), Expect(2) = 9e-026
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVM 177
PL L LSWL IC+A+ VD SS ++NCPAL VM
Sbjct: 397 PLPKLLLSWLSICAATPVDLSSRMKVLNCPALASTPVM 284
Score = 46.0 bits (94), Expect(3) = 1e-038
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
IT +L+KAGQF F++LL+ST A QI NQL +G
Sbjct: 285 ITGVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG 398
Score = 31.8 bits (63), Expect(3) = 1e-038
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 565 LYAGDRLVVYQVSKVLLPWA 624
LY GD+LVVY+ ++ PWA
Sbjct: 666 LYTGDQLVVYRSTRCSCPWA 725
>gb|CV762263.1|CV762263 FGAS056652 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 895
Score = 122 bits (262), Expect(3) = 4e-038
Identities = 50/90 (55%), Positives = 66/90 (73%)
Frame = +1 / +2
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD QK +L+Q+HV+S A+P +Q +TVSNPLRTQAG T
Sbjct: 206 GMTVFAPTDNAFTSLASGTLNSLSDSQKNALIQYHVLSTAIPMSQFDTVSNPLRTQAGST 385
Query: 472 GRGKYPLNLTADXXXXXXXXXXXXATLDAT 561
+YPLN+TA+ AT+D T
Sbjct: 386 SPAQYPLNVTAEGQQVNITTGVVNATVDNT 475
Score = 90.4 bits (191), Expect(3) = 2e-029
Identities = 44/72 (61%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
SAV LSGY V PACVRSGLLTVS+C G A + TW S F S+ ELSVP S
Sbjct: 420 SAVTLSGYWAGEVLPACVRSGLLTVSNCDMGMAVERTWYWMSAFFWLSDSELSVPEASEV 241
Query: 326 KALSGGANTVSP 291
KALS GANTV P
Sbjct: 240 KALSVGANTVMP 205
Score = 44.1 bits (90), Expect(3) = 2e-029
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLR 189
PL L LSWL IC+A+ VD SS ++ CPAL R
Sbjct: 207 PLPKLLLSWLSICAATPVDLSSRMKVLRCPALAR 106
Score = 40.5 bits (82), Expect(3) = 4e-038
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLPWAL 627
LY GD+LVVYQV+KVLLP A+
Sbjct: 476 LYTGDQLVVYQVNKVLLPMAI 538
Score = 34.1 bits (68), Expect(3) = 4e-038
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 187 ILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
+ +KAG F++LL+ST A QI NQL +G
Sbjct: 104 VRAKAGHLNTFIRLLKSTGVAAQIDNQLNNSFGSG 208
Score = 33.1 bits (66), Expect(3) = 2e-029
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 615 QQHLADLVDDEPVPGVKR 562
Q+HL DLVDDE V GV+R
Sbjct: 526 QEHLVDLVDDELVAGVER 473
>gb|CV763836.1|CV763836 FGAS058219 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 116 bits (247), Expect(3) = 2e-036
Identities = 45/72 (62%), Positives = 61/72 (84%)
Frame = +1 / +2
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD QK +L+Q+HV+S A+P +Q +TVSNPLRTQAG +
Sbjct: 410 GMTVFAPTDNAFTSLASGTLNSLSDSQKNALIQYHVLSTAIPMSQFDTVSNPLRTQAGSS 589
Query: 472 GRGKYPLNLTAD 507
+YPLN+TA+
Sbjct: 590 SPRQYPLNVTAE 625
Score = 88.6 bits (187), Expect(2) = 3e-025
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
SAV LSGY + PACVRSGLLTVS+C G A + TW S F S+ ELSVP S
Sbjct: 624 SAVTLSGYWRGELLPACVRSGLLTVSNCDMGMAVERTWYWMSAFFWLSDSELSVPEASEV 445
Query: 326 KALSGGANTVSP 291
KALS GANTV P
Sbjct: 444 KALSVGANTVMP 409
Score = 47.3 bits (97), Expect(2) = 3e-025
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVM 177
PL L LSWL IC+A+ VD SS ++NCPAL VM
Sbjct: 411 PLPKLLLSWLSICAATPVDLSSRMKVLNCPALASTPVM 298
Score = 46.0 bits (94), Expect(3) = 2e-036
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
IT +L+KAGQF F++LL+ST A QI NQL +G
Sbjct: 299 ITGVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG 412
Score = 29.9 bits (59), Expect(3) = 2e-036
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 565 LYAGDRLVVYQVSKVL 612
LY GD+L+VYQV KV+
Sbjct: 682 LYTGDQLLVYQVKKVV 729
>gb|BE518128.1|BE518128 WHE0811_D06_H11ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0811_D06_H11, mRNA sequence
Length = 598
Score = 123 bits (264), Expect(2) = 3e-035
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = +1 / +2
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD QK +L+Q+HV+S A+P +Q +TVSNPLRTQAG +
Sbjct: 302 GMTVFAPTDNAFTSLASGTLNSLSDSQKNALIQYHVLSTAIPMSQFDTVSNPLRTQAGSS 481
Query: 472 GRGKYPLNLTADXXXXXXXXXXXXATLDAT 561
G+YPLN+TA+ AT+D T
Sbjct: 482 SPGQYPLNVTAEGQQVNITTGVVNATVDNT 571
Score = 92.7 bits (196), Expect(2) = 2e-026
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = -2 / -2
Query: 506 SAVRLSGYLPLPVSPACVRSGLLTVSSCAAGSAADTTWNCTSDVFCWSERELSVPAGSAE 327
SAV LSGY P + PACVRSGLLTVS+C G A + TW S F S+ ELSVP S
Sbjct: 516 SAVTLSGYWPGELLPACVRSGLLTVSNCDMGMAVERTWYWMSAFFWLSDSELSVPEASEV 337
Query: 326 KALSGGANTVSP 291
KALS GANTV P
Sbjct: 336 KALSVGANTVMP 301
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 290 PLDGLPLSWLVICSASRVDCSSWRNLVNCPALLRIAVM 177
PL L LSWL IC+A+ VD SS ++NCPAL VM
Sbjct: 303 PLPKLLLSWLSICAATPVDLSSRMKVLNCPALASTPVM 190
Score = 46.0 bits (94), Expect(2) = 3e-035
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNG 291
IT +L+KAGQF F++LL+ST A QI NQL +G
Sbjct: 191 ITGVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG 304
>gb|DR740618.1|DR740618 FGAS000560 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1098
Score = 107 bits (228), Expect(2) = 1e-026
Identities = 40/72 (55%), Positives = 57/72 (79%)
Frame = +1 / +3
Query: 292 GLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQAGDT 471
G+TVFAP D+AF++L +GTLNSLSD K +L+Q+HV+S +P +Q +TVS P+RTQAG T
Sbjct: 351 GMTVFAPTDNAFTSLASGTLNSLSDSHKNALIQYHVLSTGIPMSQFDTVSKPIRTQAGRT 530
Query: 472 GRGKYPLNLTAD 507
+YP+N+T +
Sbjct: 531 SPAQYPINVTVE 566
Score = 33.1 bits (66), Expect(2) = 1e-026
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1 / +3
Query: 553 DATPLYAGDRLVVYQVSKVLLPWAL 627
D LY +LVVYQV+KVL+P A+
Sbjct: 609 DNNTLYTDVQLVVYQVNKVLVPMAI 683
>gb|AL828487.1|AL828487 AL828487 p:739 Triticum aestivum cDNA clone E08_p739_plate_1, mRNA
sequence
Length = 517
Score = 107 bits (228), Expect = 2e-022
Identities = 45/95 (47%), Positives = 64/95 (67%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNGGLTVFAPPDSAFSALPAGTLNS 357
+TAIL K GQ+T F++L++ T++ Q+ +QL + G TVFAP D+AF+ L GTLNS
Sbjct: 176 VTAILVKGGQYTTFMRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNS 355
Query: 358 LSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
L+ QQ+ SLVQ H++ +T SNP+RTQA
Sbjct: 356 LTQQQQVSLVQAHILPQYYTMESFQTASNPVRTQA 460
>gb|CA499262.1|CA499262 WHE4005_C10_E19ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4005_C10_E19, mRNA sequence
Length = 596
Score = 107 bits (228), Expect = 2e-022
Identities = 45/95 (47%), Positives = 64/95 (67%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNGGLTVFAPPDSAFSALPAGTLNS 357
+TAIL K GQ+T F++L++ T++ Q+ +QL + G TVFAP D+AF+ L GTLNS
Sbjct: 179 VTAILVKGGQYTTFMRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNS 358
Query: 358 LSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
L+ QQ+ SLVQ H++ +T SNP+RTQA
Sbjct: 359 LTQQQQVSLVQAHILPQYYTMESFQTASNPVRTQA 463
>gb|BT009205.1| Triticum aestivum clone wle1n.pk0037.e9:fis, full insert mRNA
sequence
Length = 1013
Score = 107 bits (228), Expect = 2e-022
Identities = 45/95 (47%), Positives = 64/95 (67%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQLKGKPSNGGLTVFAPPDSAFSALPAGTLNS 357
+TAIL K GQ+T F++L++ T++ Q+ +QL + G TVFAP D+AF+ L GTLNS
Sbjct: 184 VTAILVKGGQYTTFMRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNS 363
Query: 358 LSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
L+ QQ+ SLVQ H++ +T SNP+RTQA
Sbjct: 364 LTQQQQVSLVQAHILPQYYTMESFQTASNPVRTQA 468
>gb|DR740065.1|DR740065 FGAS084993 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1105
Score = 79.9 bits (168), Expect(2) = 5e-021
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
S+ G TVFAP DSAF++L GTLNSLS Q + +LVQ H+V ET SNP+RTQA
Sbjct: 326 SDTGFTVFAPTDSAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQA 505
Query: 463 GDT 471
T
Sbjct: 506 SGT 514
Score = 41.8 bits (85), Expect(2) = 5e-021
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQ 267
+TA+L KAGQ+TKF++L+ ST++ Q+ Q
Sbjct: 227 VTAVLEKAGQYTKFIRLMASTQQDTQLNAQ 316
>gb|CV775044.1|CV775044 FGAS069445 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 823
Score = 79.9 bits (168), Expect(2) = 5e-021
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
S+ G TVFAP DSAF++L GTLNSLS Q + +LVQ H+V ET SNP+RTQA
Sbjct: 410 SDTGFTVFAPTDSAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQA 589
Query: 463 GDT 471
T
Sbjct: 590 SGT 598
Score = 41.8 bits (85), Expect(2) = 5e-021
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQ 267
+TA+L KAGQ+TKF++L+ ST++ Q+ Q
Sbjct: 311 VTAVLEKAGQYTKFIRLMASTQQDTQLNAQ 400
>gb|BU100186.1|BU100186 WHE3316_C04_F08ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3316_C04_F08,
mRNA sequence
Length = 681
Score = 79.9 bits (168), Expect(2) = 5e-021
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
S+ G TVFAP DSAF++L GTLNSLS Q + +LVQ H+V ET SNP+RTQA
Sbjct: 471 SDTGFTVFAPTDSAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQA 650
Query: 463 GDT 471
T
Sbjct: 651 SGT 659
Score = 41.8 bits (85), Expect(2) = 5e-021
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQ 267
+TA+L KAGQ+TKF++L+ ST++ Q+ Q
Sbjct: 372 VTAVLEKAGQYTKFIRLMASTQQDTQLNAQ 461
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 326,147,403
Number of Sequences: 636343
Number of extensions: 3729943
Number of successful extensions: 51811
Number of sequences better than 1.0e-020: 33
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 17471385098
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)