TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3866402.2.1
(406 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spi... 154 6e-037
gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA... 154 6e-037
gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA... 154 6e-037
gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA... 154 6e-037
gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA... 154 6e-037
gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aes... 154 6e-037
gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan s... 154 6e-037
gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivu... 152 2e-036
gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: L... 146 1e-034
gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: L... 146 1e-034
gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: T... 139 1e-032
gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aes... 136 1e-031
gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA... 131 5e-030
gb|CA744760.1|CA744760 wri1s.pk009.m24 wri1s Triticum aesti... 131 5e-030
gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library ... 102 8e-030
gb|CD918312.1|CD918312 G608.108N24F010907 G608 Triticum aes... 129 2e-029
gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum... 128 3e-029
gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA... 126 1e-028
gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aest... 126 1e-028
gb|CL902396.1|CL902396 CSHC1771 1639HC library Triticum aes... 118 3e-026
gb|CD452820.1|CD452820 WHE1132_C10_F20ZT CS wheat etiolated... 118 3e-026
gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-... 117 7e-026
gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan s... 117 2e-025
gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Whe... 116 2e-025
gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA... 111 9e-025
gb|BJ245329.1|BJ245329 BJ245329 Y. Ogihara unpublished cDNA... 110 8e-024
gb|BJ251203.1|BJ251203 BJ251203 Y. Ogihara unpublished cDNA... 110 8e-024
gb|BJ285948.1|BJ285948 BJ285948 Y. Ogihara unpublished cDNA... 110 8e-024
gb|BJ310851.1|BJ310851 BJ310851 Y. Ogihara unpublished cDNA... 110 8e-024
gb|CD937295.1|CD937295 OV.106J01F010202 OV Triticum aestivu... 110 8e-024
gb|CK205653.1|CK205653 FGAS017175 Triticum aestivum FGAS: L... 110 8e-024
gb|DQ086483.1| Triticum aestivum putative 1,3-beta-glucan s... 110 8e-024
gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcu... 106 1e-022
gb|CD937135.1|CD937135 OV.106B21R010430 OV Triticum aestivu... 105 2e-022
gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivu... 105 3e-022
gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestiv... 77 9e-022
gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anth... 81 1e-021
gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum ... 102 2e-021
>gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG003.D02, mRNA sequence
Length = 600
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 59 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 238
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 239 LFNQAFSRGLQISRILGGHKKDR 307
>gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 5', mRNA sequence
Length = 527
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 271 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 450
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 451 LFNQAFSRGLQISRILGGHKKDR 519
>gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 3', mRNA sequence
Length = 686
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 585 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 406
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 405 LFNQAFSRGLQISRILGGHKKDR 337
>gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 5', mRNA sequence
Length = 633
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 166 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 345
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 346 LFNQAFSRGLQISRILGGHKKDR 414
>gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 3', mRNA sequence
Length = 678
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / -2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 593 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 414
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 413 LFNQAFSRGLQISRILGGHKKDR 345
>gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aestivum cDNA clone G356105M05,
mRNA sequence
Length = 525
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 252 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 431
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 432 LFNQAFSRGLQISRILGGHKKDR 500
Score = 101 bits (216), Expect = 3e-021
Identities = 48/81 (59%), Positives = 51/81 (62%)
Frame = +1 / -3
Query: 163 FLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTDPQ 342
FL P +IREI RP LNA LKS L WNS+TNGNHA A G PIR S P RAFTDP
Sbjct: 493 FLCPPRIREICRPLLNAWLKSILVWNSDTNGNHARNAMGVNSRSPIRIS*PRARAFTDPH 314
Query: 343 SPNALMTGLLA*DICRMAHPV 405
SP TGL+A I HPV
Sbjct: 313 SPTISTTGLIAWAIRSRPHPV 251
>gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan synthase 3 (GSL3) mRNA,
partial cds
Length = 481
Score = 154 bits (330), Expect = 6e-037
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 225 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 404
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 405 LFNQAFSRGLQISRILGGHKKDR 473
>gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 730
Score = 152 bits (327), Expect = 2e-036
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+
Sbjct: 650 TGWGLLLIAQAIKPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRM 471
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFS+GLQISRIL G KK R
Sbjct: 470 LFNQAFSKGLQISRILGGHKKDR 402
>gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 146 bits (313), Expect = 1e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+QA +P+ + GLWGSV+AL+R YE +MG+++F P+ VL+WFPFVSEFQ R+
Sbjct: 586 TGWGILLIAQACRPLFRVTGLWGSVRALARAYEVIMGMLLFTPITVLSWFPFVSEFQTRM 765
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 766 LFNQAFSRGLQISRILGGQKKER 834
>gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 146 bits (313), Expect = 1e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+QA +P+ + GLWGSV+AL+R YE +MG+++F P+ VL+WFPFVSEFQ R+
Sbjct: 187 TGWGILLIAQACRPLFRVTGLWGSVRALARAYEVIMGMLLFTPITVLSWFPFVSEFQTRM 366
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 367 LFNQAFSRGLQISRILGGQKKER 435
>gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 869
Score = 139 bits (299), Expect = 1e-032
Identities = 54/83 (65%), Positives = 68/83 (81%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+QA +P+ + LWGSV+ L+R YE +MG+++F P+ VL+WFPFVSEFQ R+
Sbjct: 236 TGWGILLIAQACRPLFRVRVLWGSVRXLARAYEVIMGMLLFTPITVLSWFPFVSEFQTRM 415
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 416 LFNQAFSRGLQISRILGGQKKER 484
>gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aestivum cDNA clone GR45101M21,
mRNA sequence
Length = 567
Score = 136 bits (291), Expect = 1e-031
Identities = 54/72 (75%), Positives = 62/72 (86%)
Frame = -3 / -3
Query: 371 SKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQ 192
S PV++ GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAFSRGLQ
Sbjct: 556 SSPVVEMVGLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQ 377
Query: 191 ISRILAGGKKQR 156
ISRIL G KK R
Sbjct: 376 ISRILGGHKKDR 341
>gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh10a17 5', mRNA sequence
Length = 451
Score = 131 bits (280), Expect = 5e-030
Identities = 48/71 (67%), Positives = 61/71 (85%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L ++QA KP I + GLWGS++AL+RGYE +MG+++F P+A LAWFPFVSEFQ R+
Sbjct: 237 TGWGLLLVAQALKPAIMSVGLWGSIRALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRM 416
Query: 224 LFNQAFSRGLQ 192
LFNQAFSRGLQ
Sbjct: 417 LFNQAFSRGLQ 449
>gb|CA744760.1|CA744760 wri1s.pk009.m24 wri1s Triticum aestivum cDNA clone wri1s.pk009.m24
5' end, mRNA sequence
Length = 517
Score = 131 bits (280), Expect = 5e-030
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I QA P+IK LW S+ L R Y+ +MG+V+F+P+ L+WFPFVSEFQ RL
Sbjct: 452 TGWCILLIGQACAPLIKKTTLWDSIMELGRAYDNIMGLVLFLPIGFLSWFPFVSEFQTRL 273
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGLQISRILAG K
Sbjct: 272 LFNQAFSRGLQISRILAGQK 213
>gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library Triticum monococcum cDNA, mRNA
sequence
Length = 649
Score = 102 bits (218), Expect(2) = 8e-030
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQ 234
TGW +L ++QA KP I + GLWGS++AL+RGYE +MG+++F P+A LAWFPFVSEFQ
Sbjct: 318 TGWGLLLVAQALKPAIMSVGLWGSIRALARGYEIIMGLLLFTPIAFLAWFPFVSEFQ 488
Score = 47.3 bits (97), Expect(2) = 8e-030
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / +2
Query: 230 RLLFNQAFSRGLQISRILAGGKK 162
R+LFNQAFSRGLQISRIL G KK
Sbjct: 491 RMLFNQAFSRGLQISRILGGHKK 559
>gb|CD918312.1|CD918312 G608.108N24F010907 G608 Triticum aestivum cDNA clone G608108N24,
mRNA sequence
Length = 586
Score = 129 bits (276), Expect = 2e-029
Identities = 52/92 (56%), Positives = 69/92 (75%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KP++K FGLW V++L+R Y+ MG++IFVP+A+ +WFPF+S FQ RL
Sbjct: 58 TGWGILSIAVAWKPIVKRFGLWKIVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRL 237
Query: 224 LFNQAFSRGLQISRILAGGKKQR*C*FRKHSY 129
LFNQAFSRGL+IS ILAG + *+ H +
Sbjct: 238 LFNQAFSRGLEISLILAGNNQNAGI*WWHHPF 333
>gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum cDNA clone TaE05029A09F, mRNA
sequence
Length = 587
Score = 128 bits (274), Expect = 3e-029
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = -3 / -3
Query: 347 GLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQISRILAGG 168
GLWGSVKAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAFSRGLQISRIL G
Sbjct: 582 GLWGSVKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGH 403
Query: 167 KKQR 156
KK R
Sbjct: 402 KKDR 391
>gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 3', mRNA sequence
Length = 468
Score = 126 bits (270), Expect = 1e-028
Identities = 51/92 (55%), Positives = 68/92 (73%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KP++K GLW V++L+R Y+ MG++IFVP+A+ +WFPF+S FQ RL
Sbjct: 357 TGWGILSIAVAWKPIVKRLGLWKIVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRL 178
Query: 224 LFNQAFSRGLQISRILAGGKKQR*C*FRKHSY 129
LFNQAFSRGL+IS ILAG + *+ H +
Sbjct: 177 LFNQAFSRGLEISLILAGNNQNAGI*WWHHPF 82
>gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aestivum cDNA clone
wre1n.pk0150.g10 5' end, mRNA sequence
Length = 435
Score = 126 bits (270), Expect = 1e-028
Identities = 51/92 (55%), Positives = 68/92 (73%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KP++K GLW V++L+R Y+ MG++IFVP+A+ +WFPF+S FQ RL
Sbjct: 74 TGWGILSIAVAWKPIVKRLGLWKIVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRL 253
Query: 224 LFNQAFSRGLQISRILAGGKKQR*C*FRKHSY 129
LFNQAFSRGL+IS ILAG + *+ H +
Sbjct: 254 LFNQAFSRGLEISLILAGNNQNAGI*WWHHPF 349
>gb|CL902396.1|CL902396 CSHC1771 1639HC library Triticum aestivum genomic clone
1639HC09C14, DNA sequence
Length = 437
Score = 118 bits (253), Expect = 3e-026
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = -3 / +3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
++ Q S V++ G W S++ ++R YEY MGI+IF+P+AVL+WFPF+SEFQ RLLFNQAF
Sbjct: 102 KLRQRSGAVLRKIGPWDSIQEMARMYEYTMGILIFLPIAVLSWFPFMSEFQTRLLFNQAF 281
Query: 206 SRGLQISRILAG 171
SRGLQISRILAG
Sbjct: 282 SRGLQISRILAG 317
>gb|CD452820.1|CD452820 WHE1132_C10_F20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1132_C10_F20,
mRNA sequence
Length = 715
Score = 118 bits (253), Expect = 3e-026
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
++ Q S V++ G W S++ ++R YEY MGI+IF+P+AVL+WFPF+SEFQ RLLFNQAF
Sbjct: 439 KLRQRSGAVLRKIGPWDSIQEMARMYEYTMGILIFLPIAVLSWFPFMSEFQTRLLFNQAF 260
Query: 206 SRGLQISRILAG 171
SRGLQISRILAG
Sbjct: 259 SRGLQISRILAG 224
>gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_B23_B23, mRNA
sequence
Length = 762
Score = 117 bits (250), Expect = 7e-026
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL ++ K V+K GLW SV+ +SR Y+ MG VIF P+ +WFPFVS FQ+R+
Sbjct: 493 TGWCILCLAITWKRVVKTLGLWDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQSRI 314
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGL+IS ILAG K
Sbjct: 313 LFNQAFSRGLEISLILAGNK 254
>gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan synthase 12 (GSL12)
mRNA, partial cds
Length = 527
Score = 117 bits (250), Expect(2) = 2e-025
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL ++ K V+K GLW SV+ +SR Y+ MG VIF P+ +WFPFVS FQ+R+
Sbjct: 71 TGWCILCLAITWKRVVKTLGLWDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQSRI 250
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGL+IS ILAG K
Sbjct: 251 LFNQAFSRGLEISLILAGNK 310
Score = 17.6 bits (32), Expect(2) = 2e-025
Identities = 4/7 (57%), Positives = 4/7 (57%)
Frame = -2 / +2
Query: 84 WVMGVCW 64
W M CW
Sbjct: 452 WTMS*CW 472
>gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD003.C04, mRNA
sequence
Length = 399
Score = 116 bits (247), Expect = 2e-025
Identities = 47/80 (58%), Positives = 59/80 (73%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL ++ + V+K GLW SV+ +SR Y+ MG VIF P+ +WFPFVS FQ+R+
Sbjct: 53 TGWCILCLAITWRRVVKTLGLWDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQSRI 232
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGL+IS ILAG K
Sbjct: 233 LFNQAFSRGLEISLILAGNK 292
>gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 3', mRNA sequence
Length = 757
Score = 111 bits (237), Expect(2) = 9e-025
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL ++ K V+K GL SV+ +SR Y+ MG VIF P+ +WFPFVS FQ+R+
Sbjct: 485 TGWCILCLAITWKRVVKTLGLGDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQSRI 306
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGL+IS ILAG K
Sbjct: 305 LFNQAFSRGLEISLILAGNK 246
Score = 22.6 bits (43), Expect(2) = 9e-025
Identities = 4/8 (50%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 90 CTWVMGVC 67
C W++G+C
Sbjct: 30 CNWILGIC 7
>gb|BJ245329.1|BJ245329 BJ245329 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19a10 5', mRNA sequence
Length = 643
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 62 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 241
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 242 LFNEGFSRGLQISRILAGKK 301
>gb|BJ251203.1|BJ251203 BJ251203 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19a10 3', mRNA sequence
Length = 662
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / -2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 601 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 422
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 421 LFNEGFSRGLQISRILAGKK 362
>gb|BJ285948.1|BJ285948 BJ285948 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13j08 3', mRNA sequence
Length = 700
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / -2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 579 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 400
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 399 LFNEGFSRGLQISRILAGKK 340
>gb|BJ310851.1|BJ310851 BJ310851 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd9c16 3', mRNA sequence
Length = 701
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 534 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 355
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 354 LFNEGFSRGLQISRILAGKK 295
>gb|CD937295.1|CD937295 OV.106J01F010202 OV Triticum aestivum cDNA clone OV106J01, mRNA
sequence
Length = 694
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 352 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 531
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 532 LFNEGFSRGLQISRILAGKK 591
>gb|CK205653.1|CK205653 FGAS017175 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1132
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / -2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 606 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 427
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 426 LFNEGFSRGLQISRILAGKK 367
>gb|DQ086483.1| Triticum aestivum putative 1,3-beta-glucan synthase 2 (GSL2) mRNA,
partial cds
Length = 503
Score = 110 bits (235), Expect = 8e-024
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 223 TGWGLISIAQVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 402
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 403 LFNEGFSRGLQISRILAGKK 462
>gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0552_B02_B02, mRNA
sequence
Length = 524
Score = 106 bits (226), Expect = 1e-022
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = -3 / +1
Query: 368 KPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQI 189
K V+K GLW SV+ +SR Y+ MG VIF P+ +WFPFVS FQ+R+LFNQAFSRGL+I
Sbjct: 16 KRVVKTLGLWDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQSRMLFNQAFSRGLEI 195
Query: 188 SRILAGGK 165
S ILAG K
Sbjct: 196 SLILAGNK 219
>gb|CD937135.1|CD937135 OV.106B21R010430 OV Triticum aestivum cDNA clone OV106B21, mRNA
sequence
Length = 617
Score = 105 bits (225), Expect = 2e-022
Identities = 40/80 (50%), Positives = 59/80 (73%)
Frame = -3 / -2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ + + +P I++ +WGSV +++R YE L+G+++ PVA+L+W P E Q R+
Sbjct: 592 TGWGLISMLRVIRPFIESTVVWGSVISVARLYEILLGVIVMAPVALLSWLPGFQEMQTRV 413
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+ FSRGLQISRILAG K
Sbjct: 412 LFNEGFSRGLQISRILAGKK 353
>gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivum cDNA clone OV111N14, mRNA
sequence
Length = 508
Score = 105 bits (223), Expect = 3e-022
Identities = 42/66 (63%), Positives = 51/66 (77%)
Frame = -3 / +1
Query: 362 VIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQISR 183
V+K GLW SV+ +SR Y+ MG VIF P+ +WFPFVS FQ+R+LFNQAFSRGL+IS
Sbjct: 4 VVKTLGLWDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQSRILFNQAFSRGLEISL 183
Query: 182 ILAGGK 165
ILAG K
Sbjct: 184 ILAGNK 201
>gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestivum cDNA clone wlsu1.pk017.p1 5'
end, mRNA sequence
Length = 461
Score = 76.7 bits (161), Expect(2) = 9e-022
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQ 234
TGW IL ++ K V+K GLW SV+ +SR Y+ MG VIF P+ +WFPFVS FQ
Sbjct: 134 TGWCILCLAITWKRVVKTLGLWDSVREISRMYDAGMGAVIFAPIVFFSWFPFVSTFQ 304
Score = 45.5 bits (93), Expect(2) = 9e-022
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -3 / +3
Query: 254 PFVSEFQARLLFNQAFSRGLQISRILAGGK 165
P ++R+LFNQAFSRGL+IS ILAG K
Sbjct: 285 PLCPRSKSRILFNQAFSRGLEISLILAGNK 374
>gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4009_G12_M23, mRNA sequence
Length = 554
Score = 81.3 bits (171), Expect(2) = 1e-021
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -3 / +1
Query: 299 MGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQISRILAGGK 165
MG VIF P+ +WFPFVS FQ+R+LFNQAFSRGL+IS ILAG K
Sbjct: 352 MGAVIFAPIVFFSWFPFVSTFQSRILFNQAFSRGLEISLILAGNK 486
Score = 40.9 bits (83), Expect(2) = 1e-021
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGY 309
TGW IL ++ K V+K GLW SV+ +SR Y
Sbjct: 248 TGWCILCLAITWKRVVKTLGLWDSVREISRMY 343
>gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum cDNA clone wr1.pk0149.f7 5'
end, mRNA sequence
Length = 495
Score = 102 bits (217), Expect = 2e-021
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -3 / +1
Query: 320 SRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQISRILAGGKKQR 156
+R YE +MG+++F P+ VL+WFPFVSEFQ R+LFNQAFSRGLQISRIL G KK+R
Sbjct: 1 ARAYEVIMGMLLFTPITVLSWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKER 165
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 463,618,281
Number of Sequences: 636343
Number of extensions: 7527290
Number of successful extensions: 257742
Number of sequences better than 1.0e-020: 53
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 7466673360
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)