TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696657.2.1
(1531 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 233 5e-066
gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA... 207 7e-059
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 130 4e-053
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 131 1e-052
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 114 2e-047
gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated se... 137 9e-047
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 104 2e-044
gb|BJ247735.1|BJ247735 BJ247735 Y. Ogihara unpublished cDNA... 148 5e-044
gb|BF484918.1|BF484918 WHE2333_B04_C07ZS Wheat pre-anthesis... 149 9e-043
gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aes... 148 5e-041
gb|BE498455.1|BE498455 WHE0967_F01_K01ZS Wheat pre-anthesis... 149 4e-040
gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis... 142 2e-039
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 92 6e-038
gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA... 91 1e-036
gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivu... 90 9e-036
gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivu... 90 9e-036
gb|BI479704.1|BI479704 WHE3451_B04_C07ZS Wheat pre-anthesis... 150 3e-035
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 119 3e-035
gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: L... 99 1e-034
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 116 2e-033
gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA... 104 1e-031
gb|CK207586.1|CK207586 FGAS019223 Triticum aestivum FGAS: L... 92 2e-031
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 122 2e-031
gb|DR736658.1|DR736658 FGAS082028 Triticum aestivum FGAS: L... 92 3e-031
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 100 4e-031
gb|CA596773.1|CA596773 wpa1c.pk014.e16 wpa1c Triticum aesti... 82 6e-031
gb|DR739311.1|DR739311 FGAS084528 Triticum aestivum FGAS: L... 112 9e-031
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 100 6e-030
gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spi... 131 3e-029
gb|BQ606326.1|BQ606326 BRY_2178 wheat EST endosperm library... 88 3e-028
gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA... 127 3e-028
gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aes... 60 5e-028
gb|CD936113.1|CD936113 OV.103K18F010205 OV Triticum aestivu... 126 6e-028
gb|CK163230.1|CK163230 FGAS015851 Triticum aestivum FGAS: L... 100 6e-027
gb|BE413623.1|BE413623 SCU001.C10.R990714 ITEC SCU Wheat En... 88 7e-027
gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis... 111 1e-026
gb|BF482230.1|BF482230 WHE1798_C12_F24ZS Wheat pre-anthesis... 82 2e-026
gb|BH759167.1|BH759167 3 C16 Sp6 Mlu1 Targeted Wheat BAC Li... 118 1e-025
gb|AL818374.1|AL818374 AL818374 l:125 Triticum aestivum cDN... 117 3e-025
gb|CK207192.1|CK207192 FGAS018810 Triticum aestivum FGAS: L... 90 3e-024
gb|BF202533.1|BF202533 WHE1776_G11_M22ZS Wheat pre-anthesis... 78 9e-024
gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA... 69 1e-023
gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA... 92 1e-022
gb|CD888683.1|CD888683 G118.108O04R010925 G118 Triticum aes... 59 9e-022
gb|CA592895.1|CA592895 wpa1c.pk001.a14 wpa1c Triticum aesti... 105 1e-021
gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA... 89 5e-021
gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aes... 62 6e-021
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 233 bits (503), Expect(2) = 5e-066
Identities = 93/172 (54%), Positives = 125/172 (72%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
SK + K +PN+LVL +V NAT+ GI L N+KFFH+N+ N +S+ V++V +TAP + NT
Sbjct: 126 SKHYDCKILPNSLVLDYVNNATIRGITLKNAKFFHLNLFNCKSVLVENVEITAPGNSPNT 305
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S ++I + IG GDDC+SIGPG V + CGPG GISVG LGRYKDEKD
Sbjct: 306 DGIHMGDSEDVTIKATNIGVGDDCISIGPGTKHVKIHGSRCGPGHGISVGSLGRYKDEKD 485
Query: 687 VSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVID 532
V DI V NC +K TNG+RIKSY D++S L A+ ++++RM+ V+ PIVID
Sbjct: 486 VEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVID 641
Score = 155 bits (333), Expect(2) = 6e-039
Identities = 82/163 (50%), Positives = 95/163 (58%)
Frame = +2 / -3
Query: 533 SMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RP 712
SMTMG T SIL S + A S D S+YDL+R+PLV L Q T MS TSFSSL RP
Sbjct: 640 SMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWMSSTSFSSLYRP 461
Query: 713 RQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGA 892
R PTL+P PGP T L PGP+E QSSP PM+ M+ E P W PSV GA
Sbjct: 460 RLPTLIPWPGPHREPWILTCLVPGPMEMQSSPTPMLVALMVTSSESPMWMPSVLGLFPGA 281
Query: 893 VTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
V T T +L L WKN S++P VAL T*+ST +LG
Sbjct: 280 VISTFSTSTDLQLKRLRWKNFAFLSVMPRIVALFT*SSTRLLG 152
Score = 40.5 bits (82), Expect(2) = 5e-066
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2 / +3
Query: 1134 SWIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
+WIE+ V+N I G G +DGQG V+ K++
Sbjct: 30 NWIEVMRVDNFAINGHGIIDGQGPLVWEKNQ 122
Score = 27.6 bits (54), Expect(2) = 6e-039
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQ 1132
T PWPS +P P++ L T SIQ
Sbjct: 106 TRGPWPSMMPWPLMAKLSTRITSIQ 32
>gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf2g18 5', mRNA sequence
Length = 600
Score = 207 bits (446), Expect(2) = 7e-059
Identities = 83/148 (56%), Positives = 108/148 (72%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
SK + K +PN+LVL +V NAT+ GI L N+KFFH+N+ N +S+ V++V +TAP + NT
Sbjct: 153 SKHYDCKILPNSLVLDYVNNATIRGITLKNAKFFHLNLFNCKSVLVENVEITAPGNSPNT 332
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S ++I + IG GDDC+SIGPG V + CGPG GISVG LGRYKDEKD
Sbjct: 333 DGIHMGDSEDVTIKATNIGVGDDCISIGPGTKHVKIHGSRCGPGHGISVGSLGRYKDEKD 512
Query: 687 VSDITVRNCVLKNTTNGVRIKSYVDAES 604
V DI V NC +K TNG+RIKSY D++S
Sbjct: 513 VEDIQVTNCTIKGATNGLRIKSYEDSKS 596
Score = 138 bits (297), Expect(2) = 3e-036
Identities = 70/139 (50%), Positives = 82/139 (58%)
Frame = +2 / -3
Query: 605 DSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPG 784
D S+YDL+R+PLV L Q T MS TSFSSL RPR PTL+P PGP T L PG
Sbjct: 595 DLESSYDLIRSPLVAPLMVQLVTWMSSTSFSSLYRPRLPTLIPWPGPHREPWILTCLVPG 416
Query: 785 PIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELS 964
P+E QSSP PM+ M+ E P W PSV GAV T T +L L WKN
Sbjct: 415 PMEMQSSPTPMLVALMVTSSESPMWMPSVLGLFPGAVISTFSTSTDLQLKRLRWKNFAFL 236
Query: 965 SLIPATVALIT*NSTSVLG 1021
S++P VAL T*+ST +LG
Sbjct: 235 SVMPRIVALFT*SSTRLLG 179
Score = 42.8 bits (87), Expect(2) = 7e-059
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 1143 YTASWIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
Y +WIE+ V+N I G G +DGQG V+ K++
Sbjct: 48 YKKNWIEVMRVDNFAINGHGIIDGQGPLVWEKNQ 149
Score = 35.0 bits (70), Expect(2) = 3e-036
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLP 1177
T PWPS +P P++ L T SIQ + RS P RLP
Sbjct: 133 TRGPWPSMMPWPLMAKLSTRITSIQFFL*AVRSPVPRRLP 14
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 130 bits (279), Expect(2) = 4e-053
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = -2 / +3
Query: 747 CGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENI 568
CGPG GISVG LGRYKDEKDV DI V NC +K TNG+RIKSY D++S L A+ ++++
Sbjct: 12 CGPGHGISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDV 191
Query: 567 RMEEVANPIVIDQYFCPQKVC 505
+M+ V+ PIVIDQ +CP +C
Sbjct: 192 KMDNVSYPIVIDQKYCPNNIC 254
Score = 100 bits (212), Expect(2) = 4e-053
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -2 / +3
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 319
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 258 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 437
Query: 318 CSNAKGTAKGSIEALA 271
C NA GT+ ++ LA
Sbjct: 438 CKNAVGTSVNVVKELA 485
Score = 94.5 bits (200), Expect(2) = 3e-030
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSMTMG T SI S + A+S D S+YDL+R+PLV L Q T MS TSFS
Sbjct: 241 GQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYDLIRSPLVAPLMVQLVTWMSSTSFS 62
Query: 698 SL*RPRQPTLMPCPGP 745
SL RPR PTLMP PGP
Sbjct: 61 SLYRPRLPTLMPWPGP 14
Score = 88.6 bits (187), Expect(2) = 5e-024
Identities = 39/79 (49%), Positives = 48/79 (60%)
Frame = -1 / +2
Query: 748 LRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHLREH 569
+RPR HQR P +QGREGR H G +L Q HQR QVVRG +V A G P +R
Sbjct: 11 VRPRPRHQRGQPGAVQGREGRGGHPGDQLHHQGRHQRAPDQVVRGLQVGAQGHPLRVRRR 190
Query: 568 QDGGGGQPHRHRPVLLPAE 512
++G PHRHRP +LP +
Sbjct: 191 ENGQRLLPHRHRPEVLPQQ 247
Score = 59.7 bits (124), Expect(2) = 3e-030
Identities = 30/62 (48%), Positives = 34/62 (54%)
Frame = +2 / -1
Query: 299 VPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTET 478
VP A LQTAMVLLF+P Y LT P G + Q + ASGV +VP M S T T
Sbjct: 457 VPTAFLQTAMVLLFVPVYLRLTLTSCRPWQGTLLTQLSVTASGVAEVPTMFLKTMSATTT 278
Query: 479 CE 484
E
Sbjct: 277 LE 272
Score = 47.3 bits (97), Expect(2) = 5e-024
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -3 / +1
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
STPARTT+PWPSA TP A P +SR
Sbjct: 403 STPARTTRPWPSARTPSARPSTSSR 477
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 131 bits (281), Expect(2) = 1e-052
Identities = 50/92 (54%), Positives = 64/92 (69%)
Frame = -2 / -2
Query: 780 GCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESV 601
G V + CGPG GISVG LGRYKDEK V DI V NC +K TNG+RIKSY D++S
Sbjct: 630 GTKXVKIXGXRCGPGHGISVGSLGRYKDEKXVEDIQVTNCTIKGATNGLRIKSYEDSKSA 451
Query: 600 LTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
L A+ ++++RM+ V+ PIVIDQ +CP +C
Sbjct: 450 LRATRFVYDDVRMDNVSYPIVIDQKYCPNNIC 355
Score = 97.3 bits (206), Expect(2) = 1e-052
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = -2 / -2
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 319
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 351 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 172
Query: 318 CSNAKGTAKGSIEALA 271
C NA G + ++ LA
Sbjct: 171 CKNAVGKSVNVVKELA 124
Score = 90.9 bits (192), Expect(2) = 1e-028
Identities = 44/76 (57%), Positives = 50/76 (65%)
Frame = +2 / +2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSMTMG T SIL S + A S D S+YDL+R+PLV L Q T MS T FS
Sbjct: 368 GQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWMSSTXFS 547
Query: 698 SL*RPRQPTLMPCPGP 745
SL RPR PTL+P PGP
Sbjct: 548 SLYRPRLPTLIPWPGP 595
Score = 83.1 bits (175), Expect(2) = 2e-021
Identities = 38/79 (48%), Positives = 46/79 (58%)
Frame = -1 / -1
Query: 748 LRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHLREH 569
+RPR QR P +QGRE R H G +L Q HQR QVVRG +V A G P +R
Sbjct: 598 VRPRPRDQRGQPGAVQGREXRGGHPGDQLHHQGRHQRAPDQVVRGLQVGAPGHPLRVRRR 419
Query: 568 QDGGGGQPHRHRPVLLPAE 512
+DG PHRHRP +LP +
Sbjct: 418 EDGQRLLPHRHRPEVLPQQ 362
Score = 57.9 bits (120), Expect(2) = 1e-028
Identities = 29/62 (46%), Positives = 33/62 (53%)
Frame = +2 / +2
Query: 299 VPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTET 478
+P A LQTAMVLL +P Y LT P G + Q + ASGV DVP M S T T
Sbjct: 152 LPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASGVADVPTMFLKTMSATTT 331
Query: 479 CE 484
E
Sbjct: 332 LE 337
Score = 44.6 bits (91), Expect(2) = 2e-021
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
STPA TT+PWPSA TP A P +SR
Sbjct: 206 STPAPTTRPWPSARTPSASPSTSSR 132
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 114 bits (244), Expect(2) = 2e-047
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = -2 / +1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVAN 547
SVG LGRYKDEKDV DI V NC +K TNG+RIKSY D++S L A+ ++++RM+ V+
Sbjct: 1 SVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSY 180
Query: 546 PIVIDQYFCPQKVC 505
PIVIDQ +CP +C
Sbjct: 181 PIVIDQKYCPNNIC 222
Score = 97.3 bits (206), Expect(2) = 2e-047
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = -2 / +1
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 319
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 226 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 405
Query: 318 CSNAKGTAKGSIEALA 271
C NA G + ++ LA
Sbjct: 406 CKNAVGKSVNVVKELA 453
Score = 79.0 bits (166), Expect(2) = 4e-025
Identities = 40/69 (57%), Positives = 45/69 (65%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSMTMG T SIL S + A S D S+YDL+R+PLV L Q T MS TSFS
Sbjct: 209 GQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWMSSTSFS 30
Query: 698 SL*RPRQPT 724
SL RPR PT
Sbjct: 29 SLYRPRLPT 3
Score = 57.9 bits (120), Expect(2) = 4e-025
Identities = 29/62 (46%), Positives = 33/62 (53%)
Frame = +2 / -1
Query: 299 VPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTET 478
+P A LQTAMVLL +P Y LT P G + Q + ASGV DVP M S T T
Sbjct: 425 LPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASGVADVPTMFLKTMSATTT 246
Query: 479 CE 484
E
Sbjct: 245 LE 240
>gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0442_H04_O08, mRNA
sequence
Length = 632
Score = 137 bits (293), Expect(3) = 9e-047
Identities = 57/134 (42%), Positives = 80/134 (59%)
Frame = -2 / +3
Query: 984 TVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
+V G+ L N FH++ + + V APAD NTDG+H+ SS+I I ++ I TG
Sbjct: 12 SVQGVTLQNGPQFHLSFTRCVDVKANFLRVVAPADSPNTDGIHLNDSSRIQITDNLISTG 191
Query: 804 DDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIK 625
DDCVS+ C+ V V I+CGPG GIS+G LG+ + V + V C+L NTTNGVRIK
Sbjct: 192 DDCVSMVGNCSDVRVRDISCGPGHGISIGSLGKNRTTDRVESVRVDTCLLTNTTNGVRIK 371
Query: 624 SYVDAESVLTASHL 583
S+ + + S +
Sbjct: 372 SWQGGDGLCPRSEV 413
Score = 60.2 bits (125), Expect(4) = 9e-024
Identities = 30/63 (47%), Positives = 35/63 (55%)
Frame = +2 / -2
Query: 710 PRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAG 889
PR P L+P PGP M T+T I+TQSSPV M + + EE W PSV SAG
Sbjct: 286 PRLPMLIPWPGPHEMSLTRTSEQLPTIDTQSSPVEMRLSVIWMREESLRWMPSVLGLSAG 107
Query: 890 AVT 898
A T
Sbjct: 106 ATT 98
Score = 49.6 bits (102), Expect(4) = 9e-024
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -3
Query: 514 LRAEVLVDDDGVGHLLHPDVLEGEMGGRQH 603
L A VLVDDDGVGH+LH D LE ++ GR H
Sbjct: 477 LVAVVLVDDDGVGHVLHHDALEPQIAGRAH 388
Score = 47.3 bits (97), Expect(3) = 9e-047
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = -2 / +1
Query: 477 VSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNV 355
V V+ V F ++ GTS+T +AI + CS+T PC+ + L +VN+
Sbjct: 508 VEVRKVEFVDVRGTSATAQAIKIACSDTAPCTELELRNVNL 630
Score = 43.2 bits (88), Expect(3) = 9e-047
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -2 / +1
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQ 514
+A L FE+I M+ V+NPI+IDQY+C Q
Sbjct: 394 SARDLRFESIVMKNVSNPIIIDQYYCDQ 477
Score = 32.7 bits (65), Expect(4) = 9e-024
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2 / -1
Query: 359 LTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTET 478
LT + + +HG VS + L+A V DVP+ N T T T
Sbjct: 626 LTFLSSSSVHGAVSLHAILIACAVADVPLTSTNSTLRTST 507
Score = 24.4 bits (47), Expect(4) = 9e-024
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 626 LMRTPLVVFLSTQFRTV 676
L+RTPLVV +S Q T+
Sbjct: 370 LIRTPLVVLVSRQVSTL 320
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 104 bits (221), Expect(2) = 2e-044
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -2 / -2
Query: 708 RYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQ 529
RYKDEKDV DI V NC +K TNG+RIKSY D++S L A+ ++++RM+ V+ PIVIDQ
Sbjct: 611 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 432
Query: 528 YFCPQKVC 505
+CP +C
Sbjct: 431 KYCPNNIC 408
Score = 97.3 bits (206), Expect(2) = 2e-044
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = -2 / -2
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 319
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 404 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 225
Query: 318 CSNAKGTAKGSIEALA 271
C NA G + ++ LA
Sbjct: 224 CKNAVGKSVNVVKELA 177
Score = 68.9 bits (144), Expect(2) = 4e-022
Identities = 36/64 (56%), Positives = 41/64 (64%)
Frame = +2 / +1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSMTMG T SIL S + A S D S+YDL+R+PLV L Q T MS TSFS
Sbjct: 421 GQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWMSSTSFS 600
Query: 698 SL*R 709
SL R
Sbjct: 601 SLYR 612
Score = 57.9 bits (120), Expect(2) = 4e-022
Identities = 29/62 (46%), Positives = 33/62 (53%)
Frame = +2 / +1
Query: 299 VPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTET 478
+P A LQTAMVLL +P Y LT P G + Q + ASGV DVP M S T T
Sbjct: 205 LPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASGVADVPTMFLKTMSATTT 384
Query: 479 CE 484
E
Sbjct: 385 LE 390
>gb|BJ247735.1|BJ247735 BJ247735 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf3i08 5', mRNA sequence
Length = 605
Score = 148 bits (317), Expect(3) = 5e-044
Identities = 54/108 (50%), Positives = 75/108 (69%)
Frame = -2 / +3
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIA 1189
+DI+KLGA DG TDCT+AV++AW SAC +TG+ T++IPKGD+L G LNFTGPCKG +
Sbjct: 159 YDITKLGAKPDGTTDCTEAVEEAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLT 338
Query: 1188 IQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
I+ K+ ++WIE+ V + ITG G +DGQ AV++K+
Sbjct: 339 IKLEGNLLASNDLAKFKSNWIEIMRVKKLSITGKGNIDGQNKAVWTKN 482
Score = 115 bits (246), Expect(2) = 1e-027
Identities = 57/103 (55%), Positives = 68/103 (66%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPT 1237
TA+ PS +P PV+ T SIQL + L+RS + SRLPSS M PLHGPVK + P
Sbjct: 469 TALF*PSMLPLPVMESFFTRMISIQLDLNLARSLEASRLPSSLMVSPSPLHGPVKFKAPV 290
Query: 1238 R*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
R SPLG+ V PV HA+ HAS TA VQSV+PS +APSL MS
Sbjct: 289 RKSPLGMMMVGFPVLPHAEAHASSTASVQSVVPSGLAPSLVMS 161
Score = 47.8 bits (98), Expect(3) = 5e-044
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = -2 / +3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINI 934
S K N K +PN+LVL +A + GI ++NSKFFH+NI
Sbjct: 483 SCQKNYNCKILPNSLVLDFCDDALIEGISIINSKFFHMNI 602
Score = 29.5 bits (58), Expect(2) = 1e-027
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 935 MLMWKNLELSSLIPATVALIT*NSTSVLG 1021
M MWKNLEL +P+ A +STS G
Sbjct: 601 MFMWKNLELMIEMPSMSASSQKSSTSEFG 515
Score = 22.6 bits (43), Expect(3) = 5e-044
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2 / +3
Query: 1509 MASAHNALRVFFILAVVCAVCTAKRTGANKE 1417
MA + A+R +LAVV AK KE
Sbjct: 12 MALRNVAMRALLLLAVVSVAYAAKGKEKKKE 104
>gb|BF484918.1|BF484918 WHE2333_B04_C07ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2333_B04_C07, mRNA sequence
Length = 576
Score = 149 bits (321), Expect(2) = 9e-043
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = -2 / +3
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIA 1189
+DI+KLGA DG TDCT+AV++AW SAC +TG+ T++IPKGD+L G LNFTGPCKG +
Sbjct: 135 YDITKLGAKPDGTTDCTEAVEEAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLN 314
Query: 1188 IQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
I+ K+ ++WIE+ V + ITG G +DGQG AV++K+
Sbjct: 315 IKLEGNLLASNDLAKFKSNWIEIMRVKKLSITGKGNIDGQGKAVWTKN 458
Score = 121 bits (259), Expect(2) = 3e-028
Identities = 59/103 (57%), Positives = 69/103 (66%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPT 1237
TA+P PS +P PV+ T SIQL + L+RS + SRLPSS M PLHGPVK R P
Sbjct: 445 TALP*PSMLPLPVMESFFTRMISIQLDLNLARSLEASRLPSSLMLSPSPLHGPVKFRAPV 266
Query: 1238 R*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
R SPLG+ V PV HA+ HAS TA VQSV+PS +APSL MS
Sbjct: 265 RKSPLGMMMVGFPVLPHAEAHASSTASVQSVVPSGLAPSLVMS 137
Score = 46.0 bits (94), Expect(2) = 9e-043
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2 / +3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHIN 937
S K N K +PN+LVL +A + GI ++NSKFFH+N
Sbjct: 459 SCQKNYNCKILPNSLVLDFCDDALIEGISIINSKFFHMN 575
Score = 25.8 bits (50), Expect(2) = 3e-028
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / -3
Query: 941 MWKNLELSSLIPATVALIT*NSTSVLG 1021
MWKNLEL +P+ A +ST+ G
Sbjct: 571 MWKNLELMIEMPSMSASSQKSSTNEFG 491
>gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aestivum cDNA clone G174102G03, mRNA
sequence
Length = 690
Score = 148 bits (318), Expect(3) = 5e-041
Identities = 61/143 (42%), Positives = 88/143 (61%)
Frame = -2 / +2
Query: 1026 AMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGG 847
A P +L ++ N + G+ +NS H+ + S + + D V+AP D NTDG+HV
Sbjct: 62 APPQSLTIYRSRNVVIQGLTSVNSAGIHVTVQASTGVAIVDTVVSAPGDSPNTDGIHVKQ 241
Query: 846 SSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVR 667
SS ++I N+ IGTGDDC+S+ G + V + +TCGPG GIS+G LG ++ V +ITV+
Sbjct: 242 SSDVTIRNAVIGTGDDCISMVEGSSDVWIQGVTCGPGHGISIGSLGDTPEQVAVRNITVK 421
Query: 666 NCVLKNTTNGVRIKSYVDAESVL 598
L TTNG+RIKS+ A S L
Sbjct: 422 AVTLAGTTNGLRIKSWAKANSGL 490
Score = 33.6 bits (67), Expect(3) = 5e-041
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 585 LTFENIRMEEVANPIVIDQYFCP 517
+ F ++ M V NPI++DQ +CP
Sbjct: 500 VAFSDVVMRNVRNPIIVDQNYCP 568
Score = 26.3 bits (51), Expect(3) = 5e-041
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTP 424
S + + +V++ N+ GTS+TP
Sbjct: 599 SGIKITNVSYTNVEGTSATP 658
>gb|BE498455.1|BE498455 WHE0967_F01_K01ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0967_F01_K01, mRNA sequence
Length = 610
Score = 149 bits (321), Expect(2) = 4e-040
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIA 1189
+DI+KLGA DG TDCT+AV++AW SAC +TG+ T++IPKGD+L G LNFTGPCKG +
Sbjct: 157 YDITKLGAKPDGTTDCTEAVEEAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLN 336
Query: 1188 IQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
I+ K+ ++WIE+ V + ITG G +DGQG AV++K+
Sbjct: 337 IKLEGNLLASNDLAKFKSNWIEIMRVKKLSITGKGNIDGQGKAVWTKN 480
Score = 122 bits (262), Expect(2) = 8e-029
Identities = 60/103 (58%), Positives = 69/103 (66%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPT 1237
TA+P PS +P PVI T SIQL + L+RS + SRLPSS M PLHGPVK R P
Sbjct: 467 TALP*PSMLPLPVIESFFTRMISIQLDLNLARSLEASRLPSSLMLSPSPLHGPVKFRAPV 288
Query: 1238 R*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
R SPLG+ V PV HA+ HAS TA VQSV+PS +APSL MS
Sbjct: 287 RKSPLGMMMVGFPVLPHAEAHASSTASVQSVVPSGLAPSLVMS 159
Score = 37.3 bits (75), Expect(2) = 4e-040
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINI 934
+T + +LVL +A + GI ++NSKFFH+NI
Sbjct: 491 RTTTARYCQTSLVLDFCDDALIEGISIINSKFFHMNI 601
Score = 26.3 bits (51), Expect(2) = 8e-029
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 935 MLMWKNLELSSLIPATVALIT*NSTS 1012
M MWKNLEL +P+ A +ST+
Sbjct: 600 MFMWKNLELMIEMPSMSASSQKSSTN 523
>gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_E08_J16, mRNA sequence
Length = 472
Score = 142 bits (304), Expect(2) = 2e-039
Identities = 56/110 (50%), Positives = 78/110 (70%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
SK + K +PN+LVL +V NAT+ GI L N+KFFH+N+ N +++ V++V +TAP + NT
Sbjct: 138 SKHYDCKILPNSLVLDYVNNATIRGITLKNAKFFHLNLFNCKNVLVENVEITAPGNSPNT 317
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVG 718
DG+H+G S ++I + IG GDDC+SIGPG V + CGPG GISVG
Sbjct: 318 DGIHMGDSEDVTIKATNIGVGDDCISIGPGTKHVKIHGSRCGPGHGISVG 467
Score = 98.7 bits (209), Expect(2) = 4e-023
Identities = 48/103 (46%), Positives = 57/103 (55%)
Frame = +2 / -1
Query: 713 RQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGA 892
R PTL+P PGP T L PGP+E QSSP PM+ M+ E P W PSV GA
Sbjct: 472 RLPTLIPWPGPHREPWILTCLVPGPMEMQSSPTPMLVALMVTSSESPMWMPSVLGLFPGA 293
Query: 893 VTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
V T T +L L WKN S++P VAL T*+ST +LG
Sbjct: 292 VISTFSTSTFLQLKRLRWKNFAFLSVMPRIVALFT*SSTRLLG 164
Score = 42.8 bits (87), Expect(2) = 2e-039
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2 / +3
Query: 1143 YTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
Y +WIE+ V+N I G G +DGQG V+ K+
Sbjct: 33 YKKNWIEVMRVDNFAINGHGVIDGQGPLVWEKN 131
Score = 31.3 bits (62), Expect(2) = 4e-023
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2 / -1
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRL 1174
T PWPS P P++ L T SIQ + RS P RL
Sbjct: 118 TRGPWPSMTPWPLMAKLSTRITSIQFFL*AVRSPVPRRL 2
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 91.8 bits (194), Expect(2) = 6e-038
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -2 / -2
Query: 465 DVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS 286
D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAVC NA G +
Sbjct: 405 DIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGKSVNV 226
Query: 285 IEALA 271
++ LA
Sbjct: 225 VKELA 211
Score = 91.3 bits (193), Expect(2) = 6e-038
Identities = 36/73 (49%), Positives = 54/73 (73%)
Frame = -2 / -3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
SK + K +PN+LVL +V NAT+ GI L N+KFFH+N+ N +S+ V++V +TAP + NT
Sbjct: 632 SKHYDCKILPNSLVLDYVNNATIRGITLKNAKFFHLNLFNCKSVLVENVEITAPGNSPNT 453
Query: 867 DGVHVGGSSKISI 829
DG+H+G S ++I
Sbjct: 452 DGIHMGDSEDVTI 414
>gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23c18 3', mRNA sequence
Length = 716
Score = 90.9 bits (192), Expect(3) = 1e-036
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = -2 / -3
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
+G+H+ S + + + I TGDDCVSI G + + V + CGPG GIS+G LG +
Sbjct: 681 NGIHITRSKDVQVKDCVIKTGDDCVSIENGTHNLFVSKVVCGPGHGISIGSLGDDNSRAE 502
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
VS IT+ + L TTNG RIK++
Sbjct: 501 VSGITIDSVQLYGTTNGARIKTW 433
Score = 64.3 bits (134), Expect(3) = 1e-036
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = -2 / -3
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTM 325
P R S V V +V F+NI GT+ + +AI L CS + CS + L ++N++ G T
Sbjct: 327 PCNRGQGSAVEVSNVVFKNIRGTTVSKDAIKLSCSHSISCSDIVLENINLKMEGGKGDTE 148
Query: 324 AVCSNAKGTAKGSI 283
+ C NAK G++
Sbjct: 147 STCQNAKWQESGTV 106
Score = 38.2 bits (77), Expect(3) = 1e-036
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2 / -3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFC 520
A +TF+N+ M+ V NPI+IDQ +C
Sbjct: 414 AKDITFQNMVMDNVQNPIIIDQNYC 340
>gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivum cDNA clone OV102K13, mRNA
sequence
Length = 695
Score = 90.4 bits (191), Expect(4) = 9e-036
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = -2 / +3
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDE 694
NTDG+HV S+ ++I + IGTGDDCVSI V + I C PG GIS+G LGR
Sbjct: 6 NTDGIHVAESTAVTITGARIGTGDDCVSISNASFAVKMKGIVCDPGHGISIGSLGRGGSY 185
Query: 693 KDVSDITVRNCVLKNTTNGVRIKSY 619
V +T+ + + NGVRIK++
Sbjct: 186 AAVEGVTLDDARISRAQNGVRIKTW 260
Score = 52.8 bits (109), Expect(4) = 9e-036
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = -2 / +3
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNV 355
+ +S+V+V +V +RNI+GT++ EAI CS+ PCS + L ++N+
Sbjct: 375 NQTSNVAVSNVAYRNISGTATRDEAIKFACSDAVPCSDIVLSNINL 512
Score = 35.4 bits (71), Expect(4) = 9e-036
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 588 HLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVS 472
++ F N+ +E V +PI+IDQ++C + ++++ VS
Sbjct: 285 NVRFSNVLVEAVDHPIIIDQFYCDARTACANQTSNVAVS 401
Score = 29.5 bits (58), Expect(4) = 9e-036
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3 / +1
Query: 335 TKPWPSAATPRAPPREASRHWRLA 264
T PW A TP APP AS R A
Sbjct: 550 TAPWGWATTPSAPPSTASGTTRAA 621
>gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivum cDNA clone OV102E15, mRNA
sequence
Length = 693
Score = 90.4 bits (191), Expect(4) = 9e-036
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = -2 / +3
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDE 694
NTDG+HV S+ ++I + IGTGDDCVSI V + I C PG GIS+G LGR
Sbjct: 6 NTDGIHVAESTAVTITGARIGTGDDCVSISNASFAVKMKGIVCDPGHGISIGSLGRGGSY 185
Query: 693 KDVSDITVRNCVLKNTTNGVRIKSY 619
V +T+ + + NGVRIK++
Sbjct: 186 AAVEGVTLDDARISRAQNGVRIKTW 260
Score = 52.8 bits (109), Expect(4) = 9e-036
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = -2 / +3
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNV 355
+ +S+V+V +V +RNI+GT++ EAI CS+ PCS + L ++N+
Sbjct: 375 NQTSNVAVSNVAYRNISGTATRDEAIKFACSDAVPCSDIVLSNINL 512
Score = 35.4 bits (71), Expect(4) = 9e-036
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 588 HLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVS 472
++ F N+ +E V +PI+IDQ++C + ++++ VS
Sbjct: 285 NVRFSNVLVEAVDHPIIIDQFYCDARTACANQTSNVAVS 401
Score = 29.5 bits (58), Expect(4) = 9e-036
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3 / +1
Query: 335 TKPWPSAATPRAPPREASRHWRLA 264
T PW A TP APP AS R A
Sbjct: 550 TAPWGWATTPSAPPSTASGTTRAA 621
>gb|BI479704.1|BI479704 WHE3451_B04_C07ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3451_B04_C07, mRNA sequence
Length = 530
Score = 150 bits (323), Expect = 3e-035
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = -2 / +2
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIA 1189
+DI+KLGA DG TDCT+AV++AW SAC +TG+ T++IPKGD+L G LNFTGPCKG +
Sbjct: 131 YDITKLGAKPDGTTDCTEAVEEAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLT 310
Query: 1188 IQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
I+ K+ ++WIE+ V + ITG G +DGQG AV++K+
Sbjct: 311 IKLEGNLLASNDLAKFKSNWIEIMRVKKLSITGKGNIDGQGKAVWTKN 454
Score = 122 bits (260), Expect = 1e-026
Identities = 59/103 (57%), Positives = 69/103 (66%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPT 1237
TA+P PS +P PV+ T SIQL + L+RS + SRLPSS M PLHGPVK R P
Sbjct: 441 TALP*PSMLPLPVMESFFTRMISIQLDLNLARSLEASRLPSSLMVSPSPLHGPVKFRAPV 262
Query: 1238 R*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
R SPLG+ V PV HA+ HAS TA VQSV+PS +APSL MS
Sbjct: 261 RKSPLGMMMVGFPVLPHAEAHASSTASVQSVVPSGLAPSLVMS 133
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 119 bits (254), Expect(2) = 3e-035
Identities = 46/69 (66%), Positives = 59/69 (85%)
Frame = -2 / -2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ ++ V+VKDV+F+NITGTSSTPEA+SLLCSE +PC GV++ DV +EY+GKNNKTMAVC
Sbjct: 483 KGDADRVTVKDVSFKNITGTSSTPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMAVC 304
Query: 315 SNAKGTAKG 289
S+ K TA G
Sbjct: 303 SHVKVTATG 277
Score = 51.5 bits (106), Expect(2) = 3e-035
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -2 / -2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
AS +T+EN++ME+ PI+IDQ +CP K+C K
Sbjct: 579 ASKITYENVKMEDSGYPIIIDQKYCPNKLCTSK 481
>gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 837
Score = 98.7 bits (209), Expect(4) = 1e-034
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = -2 / +2
Query: 1026 AMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGG 847
A TL L V N+TV G++ ++S+ FH++ S +T + + + APA NTDG+HVG
Sbjct: 455 AKTTTLELDGVTNSTVRGLRFVDSRGFHLSFHRSSRVTAEGLRIHAPASSRNTDGIHVGC 634
Query: 846 SSKISILNSTIGTGDDCVSIGPG 778
SS + I +S IGTGD+CVS+GPG
Sbjct: 635 SSHVRIADSVIGTGDECVSVGPG 703
Score = 41.8 bits (85), Expect(4) = 1e-034
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVK 1027
WI S ++N+ +TG+GTLDGQG A + +KT ++
Sbjct: 371 WITFSALSNLLVTGAGTLDGQGGARTNNAKTTTLE 475
Score = 40.5 bits (82), Expect(4) = 1e-034
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -2 / +2
Query: 1275 GSATVVIPKGDYLVGPLNFTGPCKGSNIAI 1186
G+AT++IP+G + VG + F+GPCK +
Sbjct: 221 GNATLLIPEGTFAVGAVEFSGPCKSGGAPV 310
Score = 23.5 bits (45), Expect(4) = 1e-034
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2 / +2
Query: 750 TCGPGQGISVGCLGRYKDEKD 688
+ GP GISVG G K +D
Sbjct: 734 SAGPAHGISVGNPGEEKKGED 796
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 116 bits (248), Expect(2) = 2e-033
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = -2 / -3
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ ++ V+VKDVTF+NITGTS+TPEA+SLLCSE +PC GV++ DV +EY+GKNNKTM VC
Sbjct: 603 KGDADRVTVKDVTFKNITGTSATPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMTVC 424
Query: 315 SNAKGTAKG 289
++ K TA G
Sbjct: 423 THVKVTATG 397
Score = 48.3 bits (99), Expect(2) = 2e-033
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2 / -3
Query: 600 LTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
L AS + +ENI M++ PI+IDQ +CP K+C K
Sbjct: 705 LVASKIHYENIEMDDSGYPIIIDQKYCPNKLCTSK 601
>gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 3', mRNA sequence
Length = 619
Score = 104 bits (221), Expect(2) = 1e-031
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -2 / -2
Query: 708 RYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQ 529
RYKDEKDV DI V NC +K TNG+RIKSY D++S L A+ ++++RM+ V+ PIVIDQ
Sbjct: 618 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 439
Query: 528 YFCPQKVC 505
+CP +C
Sbjct: 438 KYCPNNIC 415
Score = 54.7 bits (113), Expect(2) = 1e-031
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSL 370
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L
Sbjct: 411 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQL 283
>gb|CK207586.1|CK207586 FGAS019223 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 92.3 bits (195), Expect(3) = 2e-031
Identities = 43/126 (34%), Positives = 65/126 (51%)
Frame = -2 / +2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
+ +V G+ L NS+ H+ ++ + VT+P + GV V S+ + I N
Sbjct: 164 DVSVKGLTLQNSQRQHLVFTRCYNVEANYLRVTSPEYSPGSGGVLVVSSTNVHIKNDLFS 343
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVR 631
G D VSI C+ V + +I+CGPG GIS+G LG + + I + NT NGVR
Sbjct: 344 VGGDSVSIVGNCSDVRLRAISCGPGLGISIGGLGENQSSHKIEKIKTDTMFISNTKNGVR 523
Query: 630 IKSYVD 613
+K+Y D
Sbjct: 524 VKTYED 541
Score = 51.5 bits (106), Expect(3) = 2e-031
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -2 / +2
Query: 489 NSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
N S V+V+++ + +ITGTS+T A++ CS+ PC + L VN++ AG
Sbjct: 662 NGSAVAVENINYIDITGTSATERALTFACSDAMPCKRLYLDGVNLKTAG 808
Score = 32.2 bits (64), Expect(3) = 2e-031
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + F I M VANPIVIDQ++
Sbjct: 554 ARKVKFAQIMMRNVANPIVIDQHY 625
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 122 bits (260), Expect(2) = 2e-031
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = -2 / -2
Query: 813 GTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGV 634
GTGDDC+SIG G + + + + CGPG G+SVG LGRY E DV+ I V + + T NGV
Sbjct: 676 GTGDDCISIGQGNHNIYIARVHCGPGHGMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGV 497
Query: 633 RIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
RIK++ ++ + A+ + FEN+ M++V PI+IDQ +CP C
Sbjct: 496 RIKTWENSPTKSFAARMLFENMVMKDVQTPIIIDQKYCPYYNC 368
Score = 35.9 bits (72), Expect(2) = 2e-031
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2 / -2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLC 403
S V+++D+ F+NI GTS+ P A+ L C
Sbjct: 352 SGVTIEDIKFKNIKGTSTLPVAVLLRC 272
>gb|DR736658.1|DR736658 FGAS082028 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1118
Score = 92.3 bits (195), Expect(3) = 3e-031
Identities = 50/158 (31%), Positives = 72/158 (45%)
Frame = -2 / -3
Query: 1086 GTLDGQGTAVYSKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVK 907
G G+G A + + P L L + +V G L S+ H ++
Sbjct: 1032 GQHGGRGPARTKTAPVPPGRVAPMALHLEDCQDVSVKGSTLQTSQRQHFVFTRXYNVEAN 853
Query: 906 DVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGI 727
+ VT+P T GV V S+ + I N G D VSI C+ V + +I+CGPG GI
Sbjct: 852 YLRVTSPEYSPRTAGVLVVSSTNVHIKNDLFSVGGDSVSIVGNCSDVRLRAISCGPGLGI 673
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVD 613
S+G LG + + I + NT NGVR+K+Y D
Sbjct: 672 SIGGLGENQSSHKIEKIKTDTMFISNTKNGVRVKTYED 559
Score = 50.6 bits (104), Expect(3) = 3e-031
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 489 NSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
N S V+V+++ + +ITGTS+T A++ CS+ PC + L VN+ AG
Sbjct: 438 NGSAVAVENINYIDITGTSATERAVTFACSDAMPCRRLYLDGVNLTTAG 292
Score = 32.2 bits (64), Expect(3) = 3e-031
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + F I M VANPIVIDQ++
Sbjct: 546 ARKVKFAQIMMRNVANPIVIDQHY 475
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 100 bits (212), Expect(2) = 4e-031
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -2 / -2
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 319
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 401 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 222
Query: 318 CSNAKGTAKGSIEALA 271
C NA GT+ ++ LA
Sbjct: 221 CKNAVGTSVNVVKELA 174
Score = 57.0 bits (118), Expect(2) = 4e-031
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = -2 / -2
Query: 630 IKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
IKSY D++S L A+ +++++M+ V+ PIVIDQ +CP +C
Sbjct: 530 IKSYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNIC 405
>gb|CA596773.1|CA596773 wpa1c.pk014.e16 wpa1c Triticum aestivum cDNA clone wpa1c.pk014.e16 5'
end, mRNA sequence
Length = 614
Score = 81.7 bits (172), Expect(3) = 6e-031
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -2 / +3
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNI 1192
DI LGA DGKTD T+AV AW +AC ATG+ +VIP G++LVG L +GPC S I
Sbjct: 183 DIVMLGAKGDGKTDATQAVMKAWKNACGATGTQKIVIPPGNFLVGALELSGPCTSSII 356
Score = 46.9 bits (96), Expect(3) = 6e-031
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFH 943
SK + K +PN+LVL +V NAT+ GI L N+KFFH
Sbjct: 507 SKHYDCKILPNSLVLDYVNNATIRGITLKNAKFFH 611
Score = 45.5 bits (93), Expect(3) = 6e-031
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -1 / +2
Query: 1195 HRHPAGWQPAGIKRPGQVHGELDRIVSR*QHRDHRLGHAGRP 1070
H HPAG QP G +RP ++ ELDR +R Q R R H RP
Sbjct: 350 HHHPAGRQPPGHRRPHRLQEELDRGDARGQLRHQRPRHHRRP 475
>gb|DR739311.1|DR739311 FGAS084528 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1159
Score = 112 bits (240), Expect(3) = 9e-031
Identities = 51/139 (36%), Positives = 71/139 (51%)
Frame = -2 / +2
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K++ N + P L +V G+ L N FH++ + + V APAD N
Sbjct: 620 KTQPCNTRXPPRALHFEECRGVSVQGVTLQNGPQFHLSFTRCVDVKANFLRVVAPADSPN 799
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEK 691
TDG H+ SS++ I I TGDDCVS+ C+ V V I+CGPGQGIS+G LG+ +D
Sbjct: 800 TDGGHLNDSSRVQITGQLISTGDDCVSMVGNCSDVRVRDISCGPGQGISIGSLGKDRDHG 979
Query: 690 DVSDITVRNCVLKNTTNGV 634
+ V + V GV
Sbjct: 980 QGQEREVGHLVAHQNQQGV 1036
Score = 37.7 bits (76), Expect(3) = 9e-031
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 1362 ISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIP 1252
+ GA DG + T+A DAWT+AC + A + +P
Sbjct: 278 LDDFGAVGDGIANDTQAFVDAWTAACGSEEQAVLAVP 388
Score = 29.9 bits (59), Expect(3) = 9e-031
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
W+ + V+ + ++G GT+DG G +++S
Sbjct: 521 WLYIYGVDGLSVSGGGTIDGVGQEWWARS 607
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 100 bits (212), Expect(2) = 6e-030
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -2 / +2
Query: 498 KRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 319
K +S V V D+ F+NI GTS+TPEA++L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 125 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 304
Query: 318 CSNAKGTAKGSIEALA 271
C NA GT+ ++ LA
Sbjct: 305 CKNAVGTSVNVVKELA 352
Score = 52.8 bits (109), Expect(2) = 6e-030
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = -2 / +2
Query: 624 SYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
SY D++S L A+ +++++M+ V+ PIVIDQ +CP +C
Sbjct: 2 SYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNIC 121
>gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spike cDNA library Triticum aestivum
cDNA clone WHE0923_F04_L07, mRNA sequence
Length = 545
Score = 131 bits (280), Expect = 3e-029
Identities = 59/140 (42%), Positives = 76/140 (54%)
Frame = -2 / +3
Query: 1038 DNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGV 859
D V P LV+ + + + +S HI + S + + + +TAP D NTDGV
Sbjct: 114 DCVTKAPTALVVMSCADVELRQFRSKDSPQMHIAVSQSSKVHLTQLTITAPGDSPNTDGV 293
Query: 858 HVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSD 679
H+ S + + STIGTGDDCVSI V VD + CGPG GISVG LGR V
Sbjct: 294 HIDRSEDVRVSRSTIGTGDDCVSISSRSRFVTVDGVVCGPGHGISVGSLGRNGATASVEY 473
Query: 678 ITVRNCVLKNTTNGVRIKSY 619
I V+N NTTNG RIK++
Sbjct: 474 IDVKNVHFINTTNGARIKTW 533
>gb|BQ606326.1|BQ606326 BRY_2178 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 626
Score = 88.1 bits (186), Expect(3) = 3e-028
Identities = 39/97 (40%), Positives = 53/97 (54%)
Frame = -2 / +1
Query: 903 VNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGIS 724
+ VT+P T GV V S+ + I N G DCVSI C+ V + +I+CGPG GIS
Sbjct: 1 LRVTSPEYSPGTAGVLVVSSTNVHIKNDLFSVGGDCVSIVGNCSDVRLRAISCGPGLGIS 180
Query: 723 VGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVD 613
+G LG + + I + NT NGVR+K+Y D
Sbjct: 181 IGGLGENQSSHKIEKIKTDTMFISNTKNGVRVKTYED 291
Score = 45.1 bits (92), Expect(3) = 3e-028
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -2 / +1
Query: 489 NSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
N S V+V+++ + +ITGTS+T A++ CS+ P + L VN+ AG
Sbjct: 412 NGSAVAVENINYIDITGTSATERAVTFACSDAMPGRRLYLDGVNLTTAG 558
Score = 31.8 bits (63), Expect(3) = 3e-028
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1 / +3
Query: 580 LREHQDGGGGQPHRHRPVLL 521
+R D GQPHRHRP LL
Sbjct: 318 VRADHDEERGQPHRHRPALL 377
>gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA library, Wh_e Triticum aestivum
cDNA clone whe22h09 5', mRNA sequence
Length = 637
Score = 127 bits (272), Expect = 3e-028
Identities = 54/134 (40%), Positives = 77/134 (57%)
Frame = -2 / +3
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P LV+ + + ++ NS HI++ S + + + TAP D NTDGVH+ S
Sbjct: 141 PTALVVMNCTDVELSQFSSKNSPQMHISVSQSSKVHLTQLTTTAPWDSPNTDGVHIDRSQ 320
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+ + ST+GTG +CVSIGPG V VD I CGPG+ +SVG LGR + V I V+N
Sbjct: 321 DVRVTRSTMGTGGECVSIGPGSRFVTVDGIVCGPGRAVSVGSLGRKGATESVEYIDVKNV 500
Query: 660 VLKNTTNGVRIKSY 619
NT++G IK++
Sbjct: 501 QFINTSSGATIKTW 542
>gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aestivum cDNA clone AZO2109E15,
mRNA sequence
Length = 541
Score = 59.7 bits (124), Expect(4) = 5e-028
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 813 GTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITV 670
G+GDDCVS+ C+ V V I+CGPG GIS+G LG+ + V ++ V
Sbjct: 11 GSGDDCVSMVGNCSDVRVRDISCGPGHGISIGSLGKNRTADRVENVRV 154
Score = 45.5 bits (93), Expect(4) = 5e-028
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -2 / +3
Query: 477 VSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
V V+ V F ++ GTS+T I + CS+T PC+ + L +VN+ G
Sbjct: 336 VEVRKVEFVDVRGTSATARLIKIACSDTAPCTELELRNVNLTAVG 470
Score = 43.2 bits (88), Expect(4) = 5e-028
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -2 / +3
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQ 514
+A L FE+I M+ V+NPI+IDQY+C Q
Sbjct: 222 SARDLRFESIVMKNVSNPIIIDQYYCDQ 305
Score = 33.1 bits (66), Expect(4) = 5e-028
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2 / +3
Query: 666 NCVLKNTTNGVRIKSY 619
+C+L NTTNGVRIKS+
Sbjct: 159 SCLLTNTTNGVRIKSW 206
>gb|CD936113.1|CD936113 OV.103K18F010205 OV Triticum aestivum cDNA clone OV103K18, mRNA
sequence
Length = 599
Score = 126 bits (270), Expect = 6e-028
Identities = 54/139 (38%), Positives = 76/139 (54%)
Frame = -2 / +3
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K++ N + P L +V G+ L N FH++ + + V AP D N
Sbjct: 183 KTQPCNTRPPPRALHFEECRGVSVQGVTLQNGPKFHLSFTRCVDVKANFLRVVAPGDSPN 362
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEK 691
TDGVH+ SS++ I ++ I TGDDCVS+ C+ V V I CGPG GIS+G LG+ +
Sbjct: 363 TDGVHLNDSSRVQITDNLISTGDDCVSMVGNCSDVRVRDIWCGPGHGISIGSLGKNRTTD 542
Query: 690 DVSDITVRNCVLKNTTNGV 634
V ++ V C+ NTTNGV
Sbjct: 543 RVENVRVDTCLFTNTTNGV 599
>gb|CK163230.1|CK163230 FGAS015851 Triticum aestivum FGAS: Library 4 Gate 8 Triticum aestivum
cDNA, mRNA sequence
Length = 1057
Score = 99.6 bits (211), Expect(3) = 6e-027
Identities = 43/115 (37%), Positives = 62/115 (53%)
Frame = -2 / +2
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K++ N + P L +V G+ L N FH++ + + + APA+ N
Sbjct: 572 KTQPCNTRPPPRALHFEECRGVSVQGVTLQNGPQFHLSFTRCVDVKASFLRLVAPAESPN 751
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGR 706
TDG+H SS++ I + I TGDDCVS+ C+ V I+CGPG GIS+G LGR
Sbjct: 752 TDGIHPHDSSRVQITDHLISTGDDCVSMVGNCSDVRGRDISCGPGHGISMGSLGR 916
Score = 37.7 bits (76), Expect(3) = 6e-027
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 1362 ISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIP 1252
+ GA DG + T+A DAWT+AC + A + +P
Sbjct: 230 LDDFGAVGDGIANDTQAFVDAWTAACGSEEQAVLAVP 340
Score = 29.9 bits (59), Expect(3) = 6e-027
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
W+ + V+ + ++G GT+DG G +++S
Sbjct: 473 WLYIYGVDGLSVSGGGTIDGVGQEWWARS 559
>gb|BE413623.1|BE413623 SCU001.C10.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU001.C10, mRNA sequence
Length = 758
Score = 88.1 bits (186), Expect(3) = 7e-027
Identities = 39/97 (40%), Positives = 53/97 (54%)
Frame = -2 / +1
Query: 903 VNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGIS 724
+ VT+P T GV V S+ + I N G DCVSI C+ V + +I+CGPG GIS
Sbjct: 124 LRVTSPEYSPGTAGVLVVSSTNVHIKNDLFSVGGDCVSIVGNCSDVRLRAISCGPGLGIS 303
Query: 723 VGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVD 613
+G LG + + I + NT NGVR+K+Y D
Sbjct: 304 IGGLGENQSSHKIEKIKTDTMFISNTKNGVRVKTYED 414
Score = 40.0 bits (81), Expect(3) = 7e-027
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -2 / +1
Query: 489 NSSHVSVKDVTFRNITGTSSTPEAISLLCSETQP 388
N S V+V+++ + +ITGTS+T A++ CS+ P
Sbjct: 535 NGSAVAVENINYIDITGTSATERAVTFACSDAMP 636
Score = 32.2 bits (64), Expect(3) = 7e-027
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + F I M VANPIVIDQ++
Sbjct: 427 ARKVKFAQIMMRNVANPIVIDQHY 498
>gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2334_A09_A18, mRNA sequence
Length = 488
Score = 111 bits (238), Expect(2) = 1e-026
Identities = 46/121 (38%), Positives = 69/121 (57%)
Frame = -2 / +3
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
V G+ + N++ H+ + S + + + + AP D NTDG+HV S+ ++I + IGTGD
Sbjct: 30 VRGLTVQNAQQMHLTVSRSRGVRLDGMAIQAPGDSPNTDGIHVAESTAVTITGARIGTGD 209
Query: 801 DCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKS 622
DCVSI V + I C PG GIS+G LGR V +T+ + + NGVRIK+
Sbjct: 210 DCVSISNASFAVKMKGIVCDPGHGISIGSLGRGGSYAAVEGVTLDDARISRAQNGVRIKT 389
Query: 621 Y 619
+
Sbjct: 390 W 392
Score = 29.9 bits (59), Expect(2) = 1e-026
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2 / +3
Query: 588 HLTFENIRMEEVANPIVIDQYFC 520
++ F N+ ++ V +PIVID ++C
Sbjct: 417 NVRFSNVLVDAVDHPIVIDHFYC 485
>gb|BF482230.1|BF482230 WHE1798_C12_F24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1798_C12_F24, mRNA sequence
Length = 590
Score = 81.7 bits (172), Expect(3) = 2e-026
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -2 / +3
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNI 1192
DI LGA DGKTD T+AV AW +AC ATG+ +VIP G++LVG L +GPC S I
Sbjct: 183 DIVMLGAKGDGKTDATQAVMKAWKNACGATGTQKIVIPPGNFLVGALELSGPCTSSII 356
Score = 43.7 bits (89), Expect(3) = 2e-026
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2 / +3
Query: 1200 SNIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
S+I I+ Y +WIE+ V+N I G G +DGQG V+ K+
Sbjct: 345 SSIIIRLDGNLLGTGDLTAYKKNWIEVMRVDNFAINGHGVIDGQGPLVWEKN 500
Score = 33.1 bits (66), Expect(3) = 2e-026
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKL 964
SK + K +PN+LVL +V NAT+ GI L
Sbjct: 507 SKHYDCKILPNSLVLDYVNNATIRGITL 590
>gb|BH759167.1|BH759167 3 C16 Sp6 Mlu1 Targeted Wheat BAC Library Triticum aestivum genomic
clone C16, DNA sequence
Length = 410
Score = 118 bits (253), Expect = 1e-025
Identities = 43/94 (45%), Positives = 61/94 (64%)
Frame = -2 / -1
Query: 1326 DCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIAIQXXXXXXXXXXXD 1147
+C + V AW SAC +TG+ T++IPKGD+L G LNFTGPCKG + I+
Sbjct: 323 NCMQXVXXAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLNIKLEGNLLASNDLA 144
Query: 1146 KYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
K+ ++WIE+ V + ITG G +DGQG AV++K+
Sbjct: 143 KFKSNWIEIMRVKKLSITGKGNIDGQGKAVWTKN 42
>gb|AL818374.1|AL818374 AL818374 l:125 Triticum aestivum cDNA clone A01_l125_plate_1, mRNA
sequence
Length = 458
Score = 117 bits (250), Expect = 3e-025
Identities = 49/94 (52%), Positives = 64/94 (68%)
Frame = -2 / +1
Query: 903 VNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGIS 724
+ V APAD NTD VH+ SS++ I ++ I TGDDCVSI C+ V V I+CGPG GIS
Sbjct: 175 LRVVAPADSPNTDCVHLNDSSRVQITDNLISTGDDCVSIVGNCSDVRVRDISCGPGHGIS 354
Query: 723 VGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKS 622
+G LG+ + V ++ V C+L NTT+GVRIKS
Sbjct: 355 IGSLGQNRTTDRVQNVRVDTCLLTNTTHGVRIKS 456
>gb|CK207192.1|CK207192 FGAS018810 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1046
Score = 90.4 bits (191), Expect(3) = 3e-024
Identities = 42/115 (36%), Positives = 59/115 (51%)
Frame = -2 / +1
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K++ N + P L +V G+ L N FH++ + + V APAD
Sbjct: 601 KTQPCNTRPPPRALHFEECRGVSVQGVTLQNGPQFHLSFTRCVDVKANFLRVVAPADXPK 780
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGR 706
DG+H SS+I I ++ I TGDDCVS+ C+ V V I+CG IS+G LGR
Sbjct: 781 HDGIHPHDSSRIQITDNLISTGDDCVSMVGHCSDVRVRDISCGARPRISIGSLGR 945
Score = 37.7 bits (76), Expect(3) = 3e-024
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2 / +1
Query: 1362 ISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIP 1252
+ GA DG + T+A DAWT+AC + A + +P
Sbjct: 259 LDDFGAVGDGIANDTQAFVDAWTAACGSEEQAVLAVP 369
Score = 29.9 bits (59), Expect(3) = 3e-024
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
W+ + V+ + ++G GT+DG G +++S
Sbjct: 502 WLYIYGVDGLSVSGGGTIDGVGQEWWARS 588
>gb|BF202533.1|BF202533 WHE1776_G11_M22ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1776_G11_M22, mRNA sequence
Length = 387
Score = 78.0 bits (164), Expect(3) = 9e-024
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = -2 / +3
Query: 1353 LGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNI 1192
LGA DGKTD T+AV AW +AC ATG+ +VIP G++LVG L +GPC S I
Sbjct: 9 LGAKGDGKTDATQAVMKAWKNACGATGTHKIVIPPGNFLVGALELSGPCTSSII 170
Score = 45.5 bits (93), Expect(3) = 9e-024
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -2 / +3
Query: 1200 SNIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
S+I I+ Y +WIE+ V+N I G GT+DGQG V+ K++
Sbjct: 159 SSIIIRLDGNLLGTGDLTAYKKNWIEVMRVDNFTINGHGTIDGQGPLVWEKNQ 317
Score = 26.3 bits (51), Expect(3) = 9e-024
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINAT 982
SK + K +PN+LVL +V NAT
Sbjct: 321 SKHYDCKILPNSLVLDYVNNAT 386
>gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA clone E01_d15_plate_7, mRNA
sequence
Length = 566
Score = 68.9 bits (144), Expect(3) = 1e-023
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = -2 / +2
Query: 936 IDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVD 757
+ S + + + +TAP D NTDGVH+ S + + STIGTGDDCVSI V VD
Sbjct: 17 VSQSSKVHLTQLTITAPGDSPNTDGVHIDRSEDVRVSRSTIGTGDDCVSISSRSRFVTVD 196
Query: 756 SI 751
+
Sbjct: 197 GV 202
Score = 50.6 bits (104), Expect(3) = 1e-023
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = -2 / +1
Query: 756 SITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S CG G GISVG LGR V I V+N NTTNG RIK++
Sbjct: 199 SRXCGXGHGISVGSLGRNGATASVEYIDVKNVHFINTTNGARIKTW 336
Score = 34.5 bits (69), Expect(3) = 1e-023
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2 / +1
Query: 477 VSVKDVTFRNITGTSSTPEAISLLCSETQPCSGV 376
V++ ++T++N+ GTS A+ CSE C+ +
Sbjct: 460 VALSNITYKNLRGTSKHKTAVDFHCSEIGSCTNI 561
>gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 3', mRNA sequence
Length = 686
Score = 92.3 bits (195), Expect(2) = 1e-022
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = -2 / -3
Query: 750 TCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFEN 571
T GPG G+SVG LGRY E DV+ I V + + T NGVRIK++ ++ + A+ + FEN
Sbjct: 615 TAGPGHGMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGVRIKTWENSPTKSFAARMLFEN 436
Query: 570 IRMEEVANPIVIDQYFCPQKVC 505
+ M++V PI+IDQ +CP C
Sbjct: 435 MVMKDVQTPIIIDQKYCPYYNC 370
Score = 35.9 bits (72), Expect(2) = 1e-022
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2 / -3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLC 403
S V+++D+ F+NI GTS+ P A+ L C
Sbjct: 354 SGVTIEDIKFKNIKGTSTLPVAVLLRC 274
>gb|CD888683.1|CD888683 G118.108O04R010925 G118 Triticum aestivum cDNA clone G118108O04,
mRNA sequence
Length = 731
Score = 59.3 bits (123), Expect(3) = 9e-022
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -2 / -1
Query: 777 CNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVD 613
C+ V + +I+CGPG GIS+G LG + + I + NT NGVR+K+Y D
Sbjct: 677 CSDVRLRAISCGPGLGISIGGLGENQSNHKIEKIKTDTMFISNTKNGVRVKTYED 513
Score = 51.5 bits (106), Expect(3) = 9e-022
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -2 / -1
Query: 489 NSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
N S V+V+++ + +ITGTS+T +A++ CS+ PC + L VN+ AG
Sbjct: 392 NGSAVAVENINYIDITGTSATEQAVTFACSDAMPCRRLYLDGVNLTTAG 246
Score = 32.2 bits (64), Expect(3) = 9e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + F I M VANPIVIDQ++
Sbjct: 500 ARKVKFAQIMMRNVANPIVIDQHY 429
>gb|CA592895.1|CA592895 wpa1c.pk001.a14 wpa1c Triticum aestivum cDNA clone wpa1c.pk001.a14 5'
end, mRNA sequence
Length = 474
Score = 105 bits (224), Expect = 1e-021
Identities = 38/56 (67%), Positives = 47/56 (83%)
Frame = -2 / +3
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+DI+KLGA DG TDCT+AV++AW SAC TG+ T++IPKGD+L G LNFTGPCKG
Sbjct: 171 YDITKLGAKPDGTTDCTEAVEEAWASACGNTGNPTIIIPKGDFLTGALNFTGPCKG 338
>gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA clone B03_d15_plate_17, mRNA
sequence
Length = 430
Score = 88.6 bits (187), Expect(2) = 5e-021
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = -2 / +2
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
+GTGDDC+S+ G + V + +TCGPG GIS+G LG ++ V +ITV+ L TTNG
Sbjct: 59 VGTGDDCISMVEGSSDVWIKGVTCGPGHGISIGSLGDTPEQVAVRNITVKAVTLAGTTNG 238
Query: 636 VRIKSYVDAESVL 598
+RIKS+ A S L
Sbjct: 239 LRIKSWAKANSGL 277
Score = 34.5 bits (69), Expect(2) = 5e-021
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2 / +2
Query: 585 LTFENIRMEEVANPIVIDQYFCPQKV 508
+ F ++ M V NPI++DQ +CP V
Sbjct: 287 VAFSDVVMRNVRNPIIVDQNYCPGNV 364
>gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 591
Score = 62.0 bits (129), Expect(3) = 6e-021
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = -2 / -3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + + +V++ N+ GTS+TP A+ CS ++PC+G+++ +V + Y + + C NA
Sbjct: 352 SGIKITNVSYTNVEGTSATPVAVRFDCSPSRPCTGITMRNVWLGYGERRRAAESFCRNAH 173
Query: 303 GTAKGSI 283
G A G +
Sbjct: 172 GVAYGQV 152
Score = 44.6 bits (91), Expect(3) = 6e-021
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 729 ISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVL 598
IS+G LG ++ V +ITV+ L TTNG+RIKS+ A S L
Sbjct: 591 ISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLRIKSWAKANSGL 460
Score = 33.6 bits (67), Expect(3) = 6e-021
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 585 LTFENIRMEEVANPIVIDQYFCP 517
+ F ++ M V NPI++DQ +CP
Sbjct: 450 VAFSDVVMRNVRNPIIVDQNYCP 382
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,351,996,945
Number of Sequences: 636343
Number of extensions: 22440022
Number of successful extensions: 299857
Number of sequences better than 1.0e-020: 69
length of database: 122,413,413
effective HSP length: 55
effective length of database: 87,414,548
effective search space used: 39686204792
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)