TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665460.2.1
(649 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD373655.1|CD373655 WHE1201_D09_G17ZT CS wheat etiolated... 269 3e-075
gb|CD866396.1|CD866396 AZO2.103F01R010329 AZO2 Triticum aes... 269 2e-074
gb|BE404118.1|BE404118 WHE1201_D09_G17ZS Wheat etiolated se... 269 2e-071
gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole pla... 242 3e-063
gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stresse... 239 2e-062
gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: L... 238 4e-062
gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: L... 237 7e-062
gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aes... 198 7e-050
gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDN... 196 2e-049
gb|CA663590.1|CA663590 wlmk1.pk0035.f2 wlmk1 Triticum aesti... 174 7e-047
gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: L... 103 4e-045
gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Whe... 176 2e-043
gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Whe... 173 1e-042
gb|BJ277768.1|BJ277768 BJ277768 Y. Ogihara unpublished cDNA... 172 3e-042
gb|CK193805.1|CK193805 FGAS002222 Triticum aestivum FGAS: L... 172 4e-042
gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium gra... 144 1e-040
gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDN... 141 1e-040
gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spi... 144 1e-040
gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aesti... 87 2e-034
gb|BM140348.1|BM140348 WHE0474_b06_d12zS Wheat Fusarium gra... 136 2e-031
gb|CA618918.1|CA618918 wl1n.pk0045.f6 wl1n Triticum aestivu... 81 1e-030
gb|CK196381.1|CK196381 FGAS004838 Triticum aestivum FGAS: L... 117 8e-028
gb|BU672400.1|BU672400 WHE3304_E01_J02ZS Chinese Spring whe... 105 3e-026
gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA... 116 2e-025
gb|BQ839155.1|BQ839155 WHE4163_A03_A05ZS Wheat CS whole pla... 92 2e-024
gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: L... 111 6e-024
gb|AL826574.1|AL826574 AL826574 p:537 Triticum aestivum cDN... 110 2e-023
gb|CA639488.1|CA639488 wre1n.pk0014.c7 wre1n Triticum aesti... 106 2e-022
gb|DR739330.1|DR739330 FGAS084547 Triticum aestivum FGAS: L... 102 5e-021
>gb|CD373655.1|CD373655 WHE1201_D09_G17ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_D09_G17, mRNA
sequence
Length = 711
Score = 269 bits (582), Expect(2) = 3e-075
Identities = 106/130 (81%), Positives = 116/130 (89%)
Frame = +2 / -2
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+LILLNSGISSCIPPEIGKL KL VLDLS I G LPDTIGNMRALEQL+VA+N LA
Sbjct: 605 LNELILLNSGISSCIPPEIGKLDKLTVLDLSSNGIVGKLPDTIGNMRALEQLNVANNMLA 426
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
GEIPES+C LP+LKNFTYS+NFFCGEPHRCLEVP +DDRQNCIAGRPDQRPGE+CI FLH
Sbjct: 425 GEIPESICALPNLKNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLH 246
Query: 362 QPRVRCDAHG 391
+P +C AHG
Sbjct: 245 RPPAQCAAHG 216
Score = 211 bits (456), Expect(2) = 5e-057
Identities = 96/130 (73%), Positives = 103/130 (79%)
Frame = -2 / +1
Query: 390 PWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFLRCG 211
P A+ G RN MH SPGRWSGRPAMQF RSS GTSRHRCGSPQKKL+E*VKFLR G
Sbjct: 217 PCAAHCAGGRWRNSMHCSPGRWSGRPAMQFCRSSMWGTSRHRCGSPQKKLWE*VKFLRFG 396
Query: 210 RPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQEEM 31
Q LSGISPA L AT SCS ARMLP+VSG +P M ++LRSST SL+SLPISGGMQEEM
Sbjct: 397 SAQMLSGISPASMLFATLSCSRARMLPMVSGSLPTMPLELRSSTVSLSSLPISGGMQEEM 576
Query: 30 PLLSRIRSLS 1
PLL RI SLS
Sbjct: 577 PLLRRISSLS 606
Score = 73.5 bits (154), Expect(3) = 8e-024
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = -1 / +3
Query: 211 QAADALRYLAGEAVVRDVELLQRPHVADRVRQGAGDAGEAEVQHGEXXXXXXXXXXXXXX 32
Q ADAL LAGE VVRDVELL+ HVAD VRQ A DA AEV+H E
Sbjct: 396 QRADALGDLAGEHVVRDVELLEGAHVADGVRQLADDAVGAEVEHRELVQLADLRRDAGGD 575
Query: 31 XAVEQDQIVE 2
AVE+DQ+VE
Sbjct: 576 AAVEEDQLVE 605
Score = 47.8 bits (98), Expect(3) = 8e-024
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = -1 / +3
Query: 391 PVGVAAHPRLVQERDALLARALVGAPGDAVLAVVDARH 278
PV R V+E DALLAR LVGA GDAVL VVD H
Sbjct: 216 PVRSTLCRRPVEELDALLARPLVGASGDAVLPVVDVGH 329
Score = 33.6 bits (67), Expect(2) = 3e-075
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2 / -2
Query: 452 VY*SVNRGNSRLLPLPSLWCQNRKGKCIHMVYTVTFISQQKI 577
+Y* V GN+ + C+ + KC H+VYTV FI ++++
Sbjct: 176 MY*YVADGNTAICNCLLPLCREKG*KCTHLVYTVIFIFRKQM 51
Score = 30.4 bits (60), Expect(2) = 5e-057
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 569 AEK*KLQYIPCVCIYPFDFDT 507
+EK*+LQYIP VCI+ T
Sbjct: 59 SEK*RLQYIPNVCIFTLSHGT 121
Score = 27.2 bits (53), Expect(3) = 8e-024
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1 / +3
Query: 583 IINLLLRNKSYSIYHVYAFTLSILTPQARQGKQSRVTTVHGSVY 452
+ +L +NK YSIY + AF + + + + H SV+
Sbjct: 45 LFHLFPKNKDYSIYQMCAFLPFLTAQRQQTVTNCSIAVCHVSVH 176
>gb|CD866396.1|CD866396 AZO2.103F01R010329 AZO2 Triticum aestivum cDNA clone AZO2103F01,
mRNA sequence
Length = 749
Score = 269 bits (582), Expect(2) = 2e-074
Identities = 106/130 (81%), Positives = 116/130 (89%)
Frame = +2 / -1
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+LILLNSGISSCIPPEIGKL KL VLDLS I G LPDTIGNMRALEQL+VA+N LA
Sbjct: 575 LNELILLNSGISSCIPPEIGKLDKLTVLDLSSNGIVGKLPDTIGNMRALEQLNVANNMLA 396
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
GEIPES+C LP+LKNFTYS+NFFCGEPHRCLEVP +DDRQNCIAGRPDQRPGE+CI FLH
Sbjct: 395 GEIPESICALPNLKNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLH 216
Query: 362 QPRVRCDAHG 391
+P +C AHG
Sbjct: 215 RPPAQCAAHG 186
Score = 211 bits (456), Expect(2) = 4e-056
Identities = 96/130 (73%), Positives = 103/130 (79%)
Frame = -2 / +1
Query: 390 PWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFLRCG 211
P A+ G RN MH SPGRWSGRPAMQF RSS GTSRHRCGSPQKKL+E*VKFLR G
Sbjct: 187 PCAAHCAGGRWRNSMHCSPGRWSGRPAMQFCRSSMWGTSRHRCGSPQKKLWE*VKFLRFG 366
Query: 210 RPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQEEM 31
Q LSGISPA L AT SCS ARMLP+VSG +P M ++LRSST SL+SLPISGGMQEEM
Sbjct: 367 SAQMLSGISPASMLFATLSCSRARMLPMVSGSLPTMPLELRSSTVSLSSLPISGGMQEEM 546
Query: 30 PLLSRIRSLS 1
PLL RI SLS
Sbjct: 547 PLLRRISSLS 576
Score = 73.5 bits (154), Expect(3) = 9e-023
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = -1 / +3
Query: 211 QAADALRYLAGEAVVRDVELLQRPHVADRVRQGAGDAGEAEVQHGEXXXXXXXXXXXXXX 32
Q ADAL LAGE VVRDVELL+ HVAD VRQ A DA AEV+H E
Sbjct: 366 QRADALGDLAGEHVVRDVELLEGAHVADGVRQLADDAVGAEVEHRELVQLADLRRDAGGD 545
Query: 31 XAVEQDQIVE 2
AVE+DQ+VE
Sbjct: 546 AAVEEDQLVE 575
Score = 47.8 bits (98), Expect(3) = 9e-023
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = -1 / +3
Query: 391 PVGVAAHPRLVQERDALLARALVGAPGDAVLAVVDARH 278
PV R V+E DALLAR LVGA GDAVL VVD H
Sbjct: 186 PVRSTLCRRPVEELDALLARPLVGASGDAVLPVVDVGH 299
Score = 33.1 bits (66), Expect(2) = 2e-074
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 529 MHTHGIYCNFYFS 567
MHT GIYCN YFS
Sbjct: 68 MHTFGIYCNLYFS 30
Score = 29.5 bits (58), Expect(2) = 4e-056
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 569 AEK*KLQYIPCVCIY 525
+EK*+LQYIP VCI+
Sbjct: 28 SEK*RLQYIPNVCIF 72
Score = 26.3 bits (51), Expect(3) = 9e-023
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 564 EIKVTVYTMCMH 529
+IK+TVYT C+H
Sbjct: 33 KIKITVYTKCVH 68
>gb|BE404118.1|BE404118 WHE1201_D09_G17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_D09_G17, mRNA
sequence
Length = 625
Score = 269 bits (582), Expect = 2e-071
Identities = 106/130 (81%), Positives = 116/130 (89%)
Frame = +2 / +2
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+LILLNSGISSCIPPEIGKL KL VLDLS I G LPDTIGNMRALEQL+VA+N LA
Sbjct: 146 LNELILLNSGISSCIPPEIGKLDKLTVLDLSSNGIVGKLPDTIGNMRALEQLNVANNMLA 325
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
GEIPES+C LP+LKNFTYS+NFFCGEPHRCLEVP +DDRQNCIAGRPDQRPGE+CI FLH
Sbjct: 326 GEIPESICALPNLKNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLH 505
Query: 362 QPRVRCDAHG 391
+P +C AHG
Sbjct: 506 RPPAQCAAHG 535
Score = 211 bits (456), Expect = 5e-054
Identities = 96/130 (73%), Positives = 103/130 (79%)
Frame = -2 / -2
Query: 390 PWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFLRCG 211
P A+ G RN MH SPGRWSGRPAMQF RSS GTSRHRCGSPQKKL+E*VKFLR G
Sbjct: 534 PCAAHCAGGRWRNSMHCSPGRWSGRPAMQFCRSSMWGTSRHRCGSPQKKLWE*VKFLRFG 355
Query: 210 RPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQEEM 31
Q LSGISPA L AT SCS ARMLP+VSG +P M ++LRSST SL+SLPISGGMQEEM
Sbjct: 354 SAQMLSGISPASMLFATLSCSRARMLPMVSGSLPTMPLELRSSTVSLSSLPISGGMQEEM 175
Query: 30 PLLSRIRSLS 1
PLL RI SLS
Sbjct: 174 PLLRRISSLS 145
Score = 73.5 bits (154), Expect(2) = 6e-021
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = -1 / -1
Query: 211 QAADALRYLAGEAVVRDVELLQRPHVADRVRQGAGDAGEAEVQHGEXXXXXXXXXXXXXX 32
Q ADAL LAGE VVRDVELL+ HVAD VRQ A DA AEV+H E
Sbjct: 355 QRADALGDLAGEHVVRDVELLEGAHVADGVRQLADDAVGAEVEHRELVQLADLRRDAGGD 176
Query: 31 XAVEQDQIVE 2
AVE+DQ+VE
Sbjct: 175 AAVEEDQLVE 146
Score = 47.8 bits (98), Expect(2) = 6e-021
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = -1 / -1
Query: 391 PVGVAAHPRLVQERDALLARALVGAPGDAVLAVVDARH 278
PV R V+E DALLAR LVGA GDAVL VVD H
Sbjct: 535 PVRSTLCRRPVEELDALLARPLVGASGDAVLPVVDVGH 422
>gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4166_D03_H06, mRNA sequence
Length = 434
Score = 242 bits (523), Expect = 3e-063
Identities = 90/132 (68%), Positives = 108/132 (81%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ MRALEQLDVAHN LA
Sbjct: 6 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMRALEQLDVAHNELA 185
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
G IPE +C LP L NFTYSYN+FCGEP RC + R DDRQNCIAGRPDQRP ++C++FLH
Sbjct: 186 GHIPEGICALPRLANFTYSYNYFCGEPERCTALRRNDDRQNCIAGRPDQRPADQCLAFLH 365
Query: 362 QPRVRCDAHGCI 397
+P V CD HGC+
Sbjct: 366 RPPVHCDGHGCL 401
Score = 164 bits (352), Expect = 1e-039
Identities = 81/133 (60%), Positives = 88/133 (66%)
Frame = -2 / -2
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A P SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 403 ARQPCPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAVHRSGSPQK*LYE*VKLA 224
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQ 40
G Q SG+ PA LCATSSCSSAR+ + SG VP +KL SST S S PISGGMQ
Sbjct: 223 SRGSAQMPSGMCPASSLCATSSCSSARIPAMDSGSVPWSWLKLTSSTVSSRSHPISGGMQ 44
Query: 39 EEMPLLSRIRSLS 1
+ MP LS SLS
Sbjct: 43 DRMPELSMTSSLS 5
>gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_D09_H18, mRNA sequence
Length = 486
Score = 239 bits (517), Expect = 2e-062
Identities = 88/131 (67%), Positives = 107/131 (81%)
Frame = +2 / +3
Query: 5 NDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLAG 184
N+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ M ALEQLDVAHN LAG
Sbjct: 12 NELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELAG 191
Query: 185 EIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLHQ 364
IPE +C LP L NFTYSYN+FCGEP RC+ + R DDRQNCIAGRPDQRP ++C++FLH+
Sbjct: 192 HIPEGICALPRLANFTYSYNYFCGEPERCMALRRNDDRQNCIAGRPDQRPADQCLAFLHR 371
Query: 365 PRVRCDAHGCI 397
P V CD HGC+
Sbjct: 372 PPVHCDGHGCL 404
Score = 163 bits (351), Expect = 1e-039
Identities = 79/131 (60%), Positives = 86/131 (65%)
Frame = -2 / -3
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A PW SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 406 AKQPWPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAMHRSGSPQK*LYE*VKLA 227
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQ 40
G Q SG+ PA LCATSSCSSA + + SG VP +KL SST S S PISGGMQ
Sbjct: 226 SRGSAQMPSGMCPASSLCATSSCSSACIPAMDSGSVPWSWLKLTSSTVSSRSHPISGGMQ 47
Query: 39 EEMPLLSRIRS 7
+ MP LS S
Sbjct: 46 DRMPELSMTSS 14
>gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1178
Score = 238 bits (515), Expect = 4e-062
Identities = 88/132 (66%), Positives = 107/132 (81%)
Frame = +2 / -3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ M ALEQLDVAHN LA
Sbjct: 600 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELA 421
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
G IPE +C LP L NFTYSYN+FCGEP RC+ + R DDRQNCIA RPDQRP ++C++FLH
Sbjct: 420 GHIPEGICALPRLANFTYSYNYFCGEPERCMALRRNDDRQNCIAARPDQRPADQCLAFLH 241
Query: 362 QPRVRCDAHGCI 397
+P V CD HGC+
Sbjct: 240 RPPVHCDGHGCL 205
Score = 163 bits (351), Expect = 1e-039
Identities = 80/133 (60%), Positives = 87/133 (65%)
Frame = -2 / +2
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A PW SQ T G CRN H S GRWSGR AMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 203 AKQPWPSQCTGGRCRNARHWSAGRWSGRAAMQFCRSSLRRSAMHRSGSPQK*LYE*VKLA 382
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQ 40
G Q SG+ PA LCATSSCSSA + + SG VP +KL SST S S PISGGMQ
Sbjct: 383 SRGSAQMPSGMCPASSLCATSSCSSACIPAMDSGSVPWSWLKLTSSTVSSRSHPISGGMQ 562
Query: 39 EEMPLLSRIRSLS 1
+ MP LS SLS
Sbjct: 563 DRMPELSMTSSLS 601
>gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 237 bits (513), Expect = 7e-062
Identities = 89/132 (67%), Positives = 107/132 (81%)
Frame = +2 / -1
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ MRALEQLDVAHN LA
Sbjct: 665 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMRALEQLDVAHNELA 486
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
G IPE +C LP L NFTYSYN+F GEP RC + R DDRQNCIAGRPDQRP ++C++FLH
Sbjct: 485 GHIPEGICALPRLANFTYSYNYFSGEPERCTALRRNDDRQNCIAGRPDQRPADQCLAFLH 306
Query: 362 QPRVRCDAHGCI 397
+P V CD HGC+
Sbjct: 305 RPPVHCDGHGCL 270
Score = 162 bits (349), Expect = 3e-039
Identities = 80/133 (60%), Positives = 88/133 (66%)
Frame = -2 / +1
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A P SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSP+K LYE*VK
Sbjct: 268 ARQPCPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAVHRSGSPEK*LYE*VKLA 447
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQ 40
G Q SG+ PA LCATSSCSSAR+ + SG VP +KL SST S S PISGGMQ
Sbjct: 448 SRGSAQMPSGMCPASSLCATSSCSSARIPAMDSGSVPWSWLKLTSSTVSSRSHPISGGMQ 627
Query: 39 EEMPLLSRIRSLS 1
+ MP LS SLS
Sbjct: 628 DRMPELSMTSSLS 666
>gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aestivum cDNA clone G118121O12,
mRNA sequence
Length = 541
Score = 198 bits (426), Expect = 7e-050
Identities = 73/113 (64%), Positives = 87/113 (76%)
Frame = +2 / -2
Query: 59 GKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLAGEIPESVCGLPHLKNFTYS 238
G A LD+SF + GTLP+++ MRALEQLDVAHN LAG IPE +C LP L NFTYS
Sbjct: 510 GGCASSPCLDVSFNQLQGTLPESMAGMRALEQLDVAHNELAGHIPEGICALPRLANFTYS 331
Query: 239 YNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDAHGCI 397
YN+FCGEP RC + R DDRQNCIAGRPDQRP ++C++FLH+P V CD HGC+
Sbjct: 330 YNYFCGEPERCTALRRNDDRQNCIAGRPDQRPADQCLAFLHRPPVHCDGHGCL 172
Score = 136 bits (291), Expect = 3e-031
Identities = 67/114 (58%), Positives = 73/114 (64%)
Frame = -2 / +2
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A P SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 170 ARQPCPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAVHRSGSPQK*LYE*VKLA 349
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLP 58
G Q SG+ PA LCATSSCSSAR+ + SGRVP +KL S LA P
Sbjct: 350 SRGSAQMPSGMCPASSLCATSSCSSARIPAMDSGRVPWSWLKLTSRHGELAQPP 511
>gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN004.C06, mRNA sequence
Length = 569
Score = 196 bits (422), Expect = 2e-049
Identities = 70/105 (66%), Positives = 85/105 (80%)
Frame = +2 / -2
Query: 83 LDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLAGEIPESVCGLPHLKNFTYSYNFFCGEP 262
LD+SF + GTLP+++ M ALEQLDVAHN LAG IPE +C LP L NFTYSYN+FCGEP
Sbjct: 568 LDVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEGICALPRLANFTYSYNYFCGEP 389
Query: 263 HRCLEVPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDAHGCI 397
RC+ + R DDRQNCIAGRPDQRP ++C++FLH+P V CD HGC+
Sbjct: 388 ERCMALRRNDDRQNCIAGRPDQRPADQCLAFLHRPPVHCDGHGCL 254
Score = 134 bits (288), Expect = 7e-031
Identities = 64/106 (60%), Positives = 70/106 (66%)
Frame = -2 / +3
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A PW SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 252 AKQPWPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAMHRSGSPQK*LYE*VKLA 431
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSS 82
G Q SG+ PA LCATSSCSSA + + SG VP +KL SS
Sbjct: 432 SRGSAQMPSGMCPASSLCATSSCSSACIPAMDSGSVPWSWLKLTSS 569
>gb|CA663590.1|CA663590 wlmk1.pk0035.f2 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0035.f2
5' end, mRNA sequence
Length = 533
Score = 174 bits (375), Expect(2) = 7e-047
Identities = 62/89 (69%), Positives = 72/89 (80%)
Frame = +2 / -2
Query: 131 GNMRALEQLDVAHNRLAGEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCI 310
G M ALEQLDVAHN LAG IPE +C P L NFTYSYN+FCGEP RC+ + R DDRQNCI
Sbjct: 415 GGMHALEQLDVAHNELAGHIPEGICAXPRLANFTYSYNYFCGEPERCMALRRNDDRQNCI 236
Query: 311 AGRPDQRPGEECISFLHQPRVRCDAHGCI 397
AGRPDQRP ++C++FLH+P V CD HGC+
Sbjct: 235 AGRPDQRPADQCLAFLHRPPVHCDGHGCL 149
Score = 119 bits (254), Expect(2) = 2e-026
Identities = 56/90 (62%), Positives = 60/90 (66%)
Frame = -2 / +3
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A P SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 147 ARQPCPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAMHRSGSPQK*LYE*VKLA 326
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLP 130
G Q SG+ PA LCATSSCSSA + P
Sbjct: 327 SRGXAQMPSGMCPASSLCATSSCSSACIPP 416
Score = 33.6 bits (67), Expect(2) = 7e-047
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 47 PPEIGKLAKLXVLDLSFTSIAGTLPDTI 130
P LA+ VLD+SFT + GTLP+++
Sbjct: 498 PXRXSVLARAHVLDVSFTQLQGTLPESM 415
Score = 21.7 bits (41), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 124 VRQGAGDAGEAEVQH 80
+RQ A + GEA VQH
Sbjct: 421 LRQCALELGEAHVQH 465
>gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 103 bits (220), Expect(3) = 4e-045
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +2 / -1
Query: 140 RALEQLDVAHNRLAGEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVP 283
RALEQL+VA+N LAGEIPES+C LP+LKN TYS+NFFCGEPHRCLE P
Sbjct: 570 RALEQLNVANNMLAGEIPESICALPNLKNLTYSHNFFCGEPHRCLECP 427
Score = 83.5 bits (176), Expect(3) = 4e-045
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +2 / -3
Query: 278 VPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDAHG 391
VP +DDRQNCIAGRPDQRPGE+CI FLH+P +C AHG
Sbjct: 433 VPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCAAHG 320
Score = 81.3 bits (171), Expect(4) = 3e-032
Identities = 36/48 (75%), Positives = 38/48 (79%)
Frame = -2 / +2
Query: 282 GTSRHRCGSPQKKLYE*VKFLRCGRPQTLSGISPARRLCATSSCSSAR 139
G SRHRCGSPQKKL+E*V+FLR G Q LSGISPA L AT SCS AR
Sbjct: 428 GHSRHRCGSPQKKLWE*VRFLRFGSAQMLSGISPASMLFATLSCSRAR 571
Score = 57.9 bits (120), Expect(4) = 3e-032
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = -2 / +3
Query: 390 PWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGT 277
P A+ G RN MH SPGRWSGRPAMQF RSS GT
Sbjct: 321 PCAAHCAGGRWRNSMHCSPGRWSGRPAMQFCRSSMWGT 434
Score = 33.6 bits (67), Expect(3) = 4e-045
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2 / -3
Query: 452 VY*SVNRGNSRLLPLPSLWCQNRKGKCIHMVYTVTFISQQKI 577
+Y* V GN+ + C+ + KC H+VYTV FI ++++
Sbjct: 280 MY*YVADGNTAICNCLLPLCREKG*KCTHLVYTVIFIFRKQM 155
Score = 30.4 bits (60), Expect(4) = 3e-032
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +1
Query: 569 AEK*KLQYIPCVCIYPFDFDT 507
+EK*+LQYIP VCI+ T
Sbjct: 163 SEK*RLQYIPNVCIFTLSHGT 225
Score = 24.9 bits (48), Expect(4) = 3e-032
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 648 FFFFFWGISICLAFRDEK 595
FFFFF+ SI ++F EK
Sbjct: 118 FFFFFFYQSIVISFVSEK 171
>gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD013.D05, mRNA
sequence
Length = 402
Score = 176 bits (379), Expect = 2e-043
Identities = 68/101 (67%), Positives = 81/101 (80%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ M ALEQLDVAHN LA
Sbjct: 99 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELA 278
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQN 304
G IPE +C LP L NFTYSYN+FCGEP RC+ + R DDRQN
Sbjct: 279 GHIPEGICALPRLANFTYSYNYFCGEPERCMALRRNDDRQN 401
Score = 115 bits (245), Expect = 6e-025
Identities = 59/101 (58%), Positives = 66/101 (65%)
Frame = -2 / -3
Query: 303 FWRSSTRGTSRHRCGSPQKKLYE*VKFLRCGRPQTLSGISPARRLCATSSCSSARMLPIV 124
F RSS R ++ HR GSPQK LYE*VK G Q SG+ PA LCATSSCSSA + +
Sbjct: 400 FCRSSLRRSAMHRSGSPQK*LYE*VKLASRGSAQMPSGMCPASSLCATSSCSSACIPAMD 221
Query: 123 SGRVPAMLVKLRSSTXSLASLPISGGMQEEMPLLSRIRSLS 1
SG VP +KL SST S S PISGGMQ+ MP LS SLS
Sbjct: 220 SGSVPWSWLKLTSSTVSSRSHPISGGMQDRMPELSMTSSLS 98
>gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD010.D12, mRNA
sequence
Length = 400
Score = 173 bits (373), Expect = 1e-042
Identities = 67/100 (67%), Positives = 80/100 (80%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ M ALEQLDVAHN LA
Sbjct: 99 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELA 278
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQ 301
G IPE +C LP L NFTYSYN+FCGEP RC+ + R DDRQ
Sbjct: 279 GHIPEGICALPRLANFTYSYNYFCGEPERCMALRRNDDRQ 398
Score = 115 bits (245), Expect = 6e-025
Identities = 59/101 (58%), Positives = 66/101 (65%)
Frame = -2 / -1
Query: 303 FWRSSTRGTSRHRCGSPQKKLYE*VKFLRCGRPQTLSGISPARRLCATSSCSSARMLPIV 124
F RSS R ++ HR GSPQK LYE*VK G Q SG+ PA LCATSSCSSA + +
Sbjct: 400 FCRSSLRRSAMHRSGSPQK*LYE*VKLASRGSAQMPSGMCPASSLCATSSCSSACIPAMD 221
Query: 123 SGRVPAMLVKLRSSTXSLASLPISGGMQEEMPLLSRIRSLS 1
SG VP +KL SST S S PISGGMQ+ MP LS SLS
Sbjct: 220 SGSVPWSWLKLTSSTVSSRSHPISGGMQDRMPELSMTSSLS 98
>gb|BJ277768.1|BJ277768 BJ277768 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13a05 5', mRNA sequence
Length = 524
Score = 172 bits (371), Expect = 3e-042
Identities = 71/121 (58%), Positives = 89/121 (73%)
Frame = +2 / +1
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
L +LILLN+ ISSCIPPEIGKL KL VLDLS AG LP++IG+M +LE ++V +N L+
Sbjct: 160 LVELILLNTSISSCIPPEIGKLKKLKVLDLSHNEFAGELPESIGDMESLEVINVGYNMLS 339
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
G +PE++C LP+LKN T N+FC EP CL VPR DDR NCI P QR E+CI+F H
Sbjct: 340 GAVPETICLLPNLKNLTVVGNYFCEEPVSCLHVPRRDDRMNCIPDWPHQRSHEQCIAFEH 519
Query: 362 Q 364
+
Sbjct: 520 R 522
Score = 117 bits (250), Expect = 1e-025
Identities = 62/122 (50%), Positives = 71/122 (58%)
Frame = -2 / -1
Query: 366 GWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFLRCGRPQTLSGI 187
G C MH S RW G+ MQF RSS RGT R GS QK L V+F R G Q +SG
Sbjct: 524 GRCSKAMHCSCDRWCGQSGMQFIRSSRRGTWRQDTGSSQK*LPTTVRFFRFGSKQMVSGT 345
Query: 186 SPARRLCATSSCSSARMLPIVSGRVPAMLVKLRSSTXSLASLPISGGMQEEMPLLSRIRS 7
+P L T S M P++SG PA + LRSST S SLPISGGMQE M +LSR+ S
Sbjct: 344 APDSMLYPTLITSRLSMSPMLSGSSPANSLWLRSSTLSFFSLPISGGMQELMLVLSRMSS 165
Query: 6 LS 1
S
Sbjct: 164 TS 159
>gb|CK193805.1|CK193805 FGAS002222 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 897
Score = 172 bits (370), Expect = 4e-042
Identities = 62/89 (69%), Positives = 71/89 (79%)
Frame = +2 / -3
Query: 131 GNMRALEQLDVAHNRLAGEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCI 310
G RALE LDVAHN LAG IPE +C LP L NFTYSYN+FCGEP RC + R DDRQNCI
Sbjct: 538 GGERALEHLDVAHNELAGHIPEGICALPQLANFTYSYNYFCGEPERCTALRRNDDRQNCI 359
Query: 311 AGRPDQRPGEECISFLHQPRVRCDAHGCI 397
AGRPDQRP ++C++FLH+P V CD HGC+
Sbjct: 358 AGRPDQRPADQCLAFLHRPPVHCDGHGCL 272
Score = 124 bits (265), Expect = 1e-027
Identities = 57/90 (63%), Positives = 60/90 (66%)
Frame = -2 / +3
Query: 399 AMHPWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFL 220
A P SQ T G CRN H S GRWSGRPAMQF RSS R ++ HR GSPQK LYE*VK
Sbjct: 270 ARQPCPSQCTGGRCRNARHWSAGRWSGRPAMQFCRSSLRRSAVHRSGSPQK*LYE*VKLA 449
Query: 219 RCGRPQTLSGISPARRLCATSSCSSARMLP 130
CG Q SG+ PA LCATS CSSAR P
Sbjct: 450 SCGSAQMPSGMCPASSLCATSRCSSARSPP 539
>gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3892_G05_M10,
mRNA sequence
Length = 653
Score = 144 bits (309), Expect(2) = 1e-040
Identities = 52/97 (53%), Positives = 74/97 (76%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+++L+N+G++SC+PPE+G L ++ V D+SF ++AG LP + M+ +EQLD+AHN L+
Sbjct: 234 LNEILLINNGLTSCLPPEVGMLREVTVFDVSFNALAGPLPPEVARMQKVEQLDIAHNLLS 413
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVD 292
G +PE+VC LP LKNFT+SYNFF GEP C V D
Sbjct: 414 GTVPEAVCDLPRLKNFTFSYNFFTGEPPSCARVLPAD 524
Score = 43.2 bits (88), Expect(2) = 1e-040
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 278 VPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDAHGC 394
+P DR+NC+ RP QR ++C +F +P V C A C
Sbjct: 513 LPADGDRRNCLPNRPAQRMPQQCAAFYARPPVDCAAFQC 629
>gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDNA clone B04_h116_plate_11, mRNA
sequence
Length = 581
Score = 141 bits (302), Expect(2) = 1e-040
Identities = 53/93 (56%), Positives = 71/93 (76%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+++L+N+G+ SC+PPEIG+L +L VLD+S +AG L + +R LEQL+VAHN L+
Sbjct: 195 LNEILLINNGLESCLPPEIGRLRELTVLDVSHNQLAGPLTQEVAGLRKLEQLNVAHNLLS 374
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEV 280
G IP++VC LP LKNFT+SYNFF GEP C V
Sbjct: 375 GPIPQAVCALPRLKNFTFSYNFFTGEPPACARV 473
Score = 46.4 bits (95), Expect(2) = 1e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2 / +3
Query: 278 VPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDA 385
VPR DR NC+ RP QR ++C +F P V C A
Sbjct: 474 VPRGSDRDNCLPNRPSQRTRQQCAAFYAHPPVNCAA 581
>gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0904_G11_N22, mRNA sequence
Length = 537
Score = 144 bits (309), Expect(2) = 1e-040
Identities = 52/97 (53%), Positives = 74/97 (76%)
Frame = +2 / +2
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+++L+N+G++SC+PPE+G L ++ V D+SF ++AG LP + M+ +EQLD+AHN L+
Sbjct: 125 LNEILLINNGLTSCLPPEVGMLREVTVFDVSFNALAGPLPPEVARMQKVEQLDIAHNLLS 304
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVD 292
G +PE+VC LP LKNFT+SYNFF GEP C V D
Sbjct: 305 GTVPEAVCDLPRLKNFTFSYNFFTGEPPSCARVLPAD 415
Score = 43.2 bits (88), Expect(2) = 1e-040
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 278 VPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDAHGC 394
+P DR+NC+ RP QR ++C +F +P V C A C
Sbjct: 404 LPADGDRRNCLPNRPAQRMPQQCAAFYARPPVDCAAFQC 520
>gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aestivum cDNA clone wdk3c.pk006.d13
5' end, mRNA sequence
Length = 554
Score = 86.8 bits (183), Expect(3) = 2e-034
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2 / -1
Query: 98 TSIAGTLPDTIGNMRALEQLDVAHNRLAGEIPESVCGLPHLKNFTYSYNFFCGEPHRCLE 277
TS + +R LEQL+VAHN L+G IP++VC LP LKNFT+SYNFF GEP C
Sbjct: 362 TSSPARFTQEVAGLRKLEQLNVAHNLLSGPIPQAVCALPRLKNFTFSYNFFTGEPPACAR 183
Query: 278 V 280
V
Sbjct: 182 V 180
Score = 51.9 bits (107), Expect(3) = 2e-034
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +2 / -3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTL 118
L +++ +N+G+ SC+PPE+G+ +L VLD+S +AG L
Sbjct: 459 LKEILFINNGLESCLPPELGRXRELTVLDVSHNQLAGPL 343
Score = 46.0 bits (94), Expect(3) = 2e-034
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2 / -1
Query: 278 VPRVDDRQNCIAGRPDQRPGEECISFLHQPRVRCDAHGC 394
VPR DR NC+ RP QR ++C + P V C A C
Sbjct: 179 VPRGSDRDNCLPNRPSQRTRQQCAAXYAHPPVNCAAFQC 63
>gb|BM140348.1|BM140348 WHE0474_b06_d12zS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0474_b06_d12,
mRNA sequence
Length = 425
Score = 136 bits (292), Expect = 2e-031
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = +2 / +2
Query: 191 PESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLHQPR 370
P +C LP L NFTYSYN+FCGEP RC+ + R DDRQNCIAGRPDQRP ++C++FLH+P
Sbjct: 17 PGGLCALPRLANFTYSYNYFCGEPERCMALRRNDDRQNCIAGRPDQRPADQCLAFLHRPP 196
Query: 371 VRCDAHGCI 397
V CD HGC+
Sbjct: 197 VHCDGHGCL 223
>gb|CA618918.1|CA618918 wl1n.pk0045.f6 wl1n Triticum aestivum cDNA clone wl1n.pk0045.f6 5'
end, mRNA sequence
Length = 434
Score = 81.3 bits (171), Expect(4) = 1e-030
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2 / +1
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLP 121
LN+LILLNSGISSCIPPEIGKL KL VLDLSF SIAG LP
Sbjct: 166 LNELILLNSGISSCIPPEIGKLDKLTVLDLSFNSIAGALP 285
Score = 72.5 bits (152), Expect(4) = 2e-024
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -2 / -1
Query: 120 GRVPAMLVKLRSSTXSLASLPISGGMQEEMPLLSRIRSLS 1
G PAML+KLRSST SL+SLPISGGMQEEMPLL R+ SLS
Sbjct: 284 GSAPAMLLKLRSSTVSLSSLPISGGMQEEMPLLRRMSSLS 165
Score = 51.0 bits (105), Expect(4) = 1e-030
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 149 EQLDVAHNRLAGEIPESVCGLPHLKN 226
EQLDVAHNRL GEIPE LPHLKN
Sbjct: 315 EQLDVAHNRLNGEIPEEHLXLPHLKN 392
Score = 47.3 bits (97), Expect(4) = 2e-024
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -2 / -2
Query: 228 KFLRCGRPQTLSGISPARRLCATSSCS 148
+FLRCG + SGISP RLCATSSCS
Sbjct: 394 EFLRCGSXRCSSGISPLSRLCATSSCS 314
Score = 31.3 bits (62), Expect(4) = 1e-030
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 221 KNFTYSYNFFCGE 259
+ TYSYNFFCGE
Sbjct: 386 QELTYSYNFFCGE 424
Score = 25.4 bits (49), Expect(4) = 1e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 123 TRSATCGRW 149
TRSA CGRW
Sbjct: 288 TRSAACGRW 314
Score = 24.4 bits (47), Expect(4) = 2e-024
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / -3
Query: 258 SPQKKLYE*V 229
SPQKKLYE*V
Sbjct: 423 SPQKKLYE*V 394
Score = 23.1 bits (44), Expect(4) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 148 QRPHVADRV 122
QRPH ADRV
Sbjct: 313 QRPHAADRV 287
>gb|CK196381.1|CK196381 FGAS004838 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 117 bits (250), Expect(2) = 8e-028
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = +2 / -1
Query: 191 PESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLHQPR 370
P + LP+LK FT+ FFCGEP RCLEVP+++DRQ CIAG P+QRPG++CI FLH+P
Sbjct: 546 PREI*ALPNLKKFTHIPQFFCGEPQRCLEVPQIEDRQKCIAGCPEQRPGKQCIEFLHRPP 367
Query: 371 VRCDAHG 391
+C AHG
Sbjct: 366 AQCSAHG 346
Score = 79.4 bits (167), Expect(5) = 4e-025
Identities = 38/67 (56%), Positives = 39/67 (58%)
Frame = -2 / +2
Query: 390 PWASQRTLGWCRNEMHSSPGRWSGRPAMQFWRSSTRGTSRHRCGSPQKKLYE*VKFLRCG 211
P A G RN MH PGR SG+PAM F RSS GTSRHRCGSPQK V FLR G
Sbjct: 347 PCAEHWAGGRWRNSMHCLPGRCSGQPAMHFCRSSIWGTSRHRCGSPQKNCGICVNFLRFG 526
Query: 210 RPQTLSG 190
Q G
Sbjct: 527 NAQISRG 547
Score = 34.1 bits (68), Expect(5) = 4e-025
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 192 GISPARRLCATSSCSSARMLPIVSGRVP 109
G PA AT SCS A +LPIVSG P
Sbjct: 543 GDLPASLFLATLSCSRACILPIVSGNFP 626
Score = 29.0 bits (57), Expect(2) = 8e-028
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / -1
Query: 5 NDLILLNSGISSCIPPE 55
N++I L SGISS IPPE
Sbjct: 732 NEMISLKSGISS*IPPE 682
Score = 26.7 bits (52), Expect(5) = 4e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 54 SGGMQEEMPLLSRIRS 7
SGG+QEE+PLL I S
Sbjct: 683 SGGIQEEIPLLREIIS 730
Score = 24.9 bits (48), Expect(5) = 4e-025
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 564 EIKVTVYTMCMH 529
+IK+TV+T C+H
Sbjct: 215 KIKITVFTKCLH 250
Score = 24.4 bits (47), Expect(5) = 4e-025
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2 / +3
Query: 648 FFFFFWGISICLAFRDEKSMNPLLIF 571
FFFFF+ F K NPL F
Sbjct: 129 FFFFFFFFFFFFFFF*RKFFNPLFFF 206
>gb|BU672400.1|BU672400 WHE3304_E01_J02ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3304_E01_J02,
mRNA sequence
Length = 421
Score = 105 bits (225), Expect(2) = 3e-026
Identities = 39/85 (45%), Positives = 59/85 (69%)
Frame = +2 / +1
Query: 8 DLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLAGE 187
+++L++ ++ CIPP++G L K+ V D+S + G LP T+ + A+++L+VA N L G
Sbjct: 13 EIVLIDDDLTGCIPPQVGMLRKVTVFDVSGNGLQGPLPATVTGLVAVQELNVAGNLLEGA 192
Query: 188 IPESVCGLPHLKNFTYSYNFFCGEP 262
+P SVCGLP L+NFTY NFF G P
Sbjct: 193 VPASVCGLPSLRNFTYEDNFFSGRP 267
Score = 33.1 bits (66), Expect(2) = 3e-026
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2 / +1
Query: 278 VPRVDDRQNCIAGRPDQRPGEECISFLHQP 367
V D R NCI G P QRP +C + +P
Sbjct: 277 VATADGRWNCILGAPAQRPPAQCAAAAARP 366
>gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21g20 5', mRNA sequence
Length = 600
Score = 116 bits (248), Expect = 2e-025
Identities = 46/70 (65%), Positives = 56/70 (80%)
Frame = +2 / +1
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ M ALEQLDVAHN LA
Sbjct: 391 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELA 570
Query: 182 GEIPESVCGL 211
G IPE +C L
Sbjct: 571 GHIPEGICAL 600
>gb|BQ839155.1|BQ839155 WHE4163_A03_A05ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4163_A03_A05, mRNA sequence
Length = 398
Score = 92.3 bits (195), Expect(2) = 2e-024
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 53 EIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLAGEIPESVCGL 211
EIGKL KL VLDLS I G LPDTIGNM ALEQL+VA+N LAGEIPES+C L
Sbjct: 238 EIGKLDKLTVLDLSSNGIVGKLPDTIGNMHALEQLNVANNMLAGEIPESICAL 396
Score = 40.9 bits (83), Expect(2) = 2e-024
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPP 52
LN+LILLNSGISSCIPP
Sbjct: 186 LNELILLNSGISSCIPP 236
>gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1120
Score = 111 bits (238), Expect = 6e-024
Identities = 45/70 (64%), Positives = 54/70 (77%)
Frame = +2 / +2
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+ + M ALEQLDVAHN LA
Sbjct: 731 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPEVMAGMHALEQLDVAHNELA 910
Query: 182 GEIPESVCGL 211
G I E +C L
Sbjct: 911 GHIREGICAL 940
>gb|AL826574.1|AL826574 AL826574 p:537 Triticum aestivum cDNA clone H04_p537_plate_4, mRNA
sequence
Length = 461
Score = 110 bits (234), Expect = 2e-023
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +2 / +2
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
L +LILLN+ ISSCIPPEIG+L KL VLDLS AG LP++IG+M +LE ++V +N L+
Sbjct: 233 LVELILLNTSISSCIPPEIGQLKKLKVLDLSHNEFAGELPESIGDMESLEVINVRYNMLS 412
Query: 182 GEIPESVCGLPHLKN 226
G +PE++C LP+LKN
Sbjct: 413 GAVPETICLLPNLKN 457
>gb|CA639488.1|CA639488 wre1n.pk0014.c7 wre1n Triticum aestivum cDNA clone wre1n.pk0014.c7
5' end, mRNA sequence
Length = 570
Score = 106 bits (227), Expect = 2e-022
Identities = 41/72 (56%), Positives = 49/72 (68%)
Frame = +2 / +2
Query: 182 GEIPESVCGLPHLKNFTYSYNFFCGEPHRCLEVPRVDDRQNCIAGRPDQRPGEECISFLH 361
G +PE++C LP+LKN T N+FC EP CL VPR DDR NCI P QR E+CI+F H
Sbjct: 2 GAVPETICLLPNLKNLTVVGNYFCEEPVSCLHVPRRDDRMNCIPDWPHQRSHEQCIAFEH 181
Query: 362 QPRVRCDAHGCI 397
+P V C A GCI
Sbjct: 182 RPPVHCGADGCI 217
>gb|DR739330.1|DR739330 FGAS084547 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1116
Score = 102 bits (217), Expect = 5e-021
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = +2 / +3
Query: 2 LNDLILLNSGISSCIPPEIGKLAKLXVLDLSFTSIAGTLPDTIGNMRALEQLDVAHNRLA 181
LN+L++LNSGI SCIPPEIG L +L VLD+SF + GTLP+++ M ALE LDVAHN L
Sbjct: 783 LNELVMLNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMPALEPLDVAHNELP 962
Query: 182 GEIPESVCGLP 214
G+ P+ LP
Sbjct: 963 GKFPKGFGPLP 995
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 470,180,506
Number of Sequences: 636343
Number of extensions: 6960844
Number of successful extensions: 252728
Number of sequences better than 1.0e-020: 42
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14367331908
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)