TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191640.2.1
(923 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 214 1e-054
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 129 2e-053
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 131 4e-053
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 113 9e-048
gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated se... 139 2e-047
gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA... 188 6e-047
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 102 1e-044
gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aes... 144 2e-040
gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA... 94 2e-037
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 123 6e-037
gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivu... 99 3e-035
gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivu... 99 3e-035
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 119 8e-035
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 128 4e-034
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 94 3e-033
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 101 1e-032
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 101 2e-031
gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA... 102 3e-031
gb|CK207586.1|CK207586 FGAS019223 Triticum aestivum FGAS: L... 92 1e-030
gb|DR736658.1|DR736658 FGAS082028 Triticum aestivum FGAS: L... 88 2e-029
gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis... 120 3e-029
gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spi... 127 2e-028
gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis... 126 3e-028
gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA... 126 5e-028
gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aes... 57 2e-027
gb|CD936113.1|CD936113 OV.103K18F010205 OV Triticum aestivu... 123 2e-027
gb|BQ606326.1|BQ606326 BRY_2178 wheat EST endosperm library... 89 4e-027
gb|BE413623.1|BE413623 SCU001.C10.R990714 ITEC SCU Wheat En... 89 1e-026
gb|AL818374.1|AL818374 AL818374 l:125 Triticum aestivum cDN... 118 8e-026
gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA... 73 4e-025
gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA... 98 8e-025
gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA... 62 3e-023
gb|DR739311.1|DR739311 FGAS084528 Triticum aestivum FGAS: L... 109 6e-023
gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aes... 66 4e-022
gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA... 90 5e-022
gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: L... 100 1e-021
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 214 bits (462), Expect = 1e-054
Identities = 82/153 (53%), Positives = 112/153 (73%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI GI L N+KFFH+N+ K + V++V ITAP + NTDG+H+G S +V I + IG
Sbjct: 183 NATIRGITLKNAKFFHLNLFNCKSVLVENVEITAPGNSPNTDGIHMGDSEDVTIKATNIG 362
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPG+ V ++ CGPG GISVG LGRYKDEKDV D+ V +C ++ TNG+R
Sbjct: 363 VGDDCISIGPGTKHVKIHGSRCGPGHGISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLR 542
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIID 468
IKSYED++S L A+ ++++RM+ V+ PI+ID
Sbjct: 543 IKSYEDSKSALRATRFVYDDVRMDNVSYPIVID 641
Score = 132 bits (282), Expect = 8e-030
Identities = 67/153 (43%), Positives = 82/153 (53%)
Frame = -1 / -3
Query: 467 SMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRP 288
SM MG T SIL S + A S D SSYDL+R+PLV L Q RP
Sbjct: 640 SMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWMSSTSFSSLYRP 461
Query: 287 RQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGA 108
R PTL+P PGP + +T +PGPME QSSP PM+ +M T + P W PSV GA
Sbjct: 460 RLPTLIPWPGPHREPWILTCLVPGPMEMQSSPTPMLVALMVTSSESPMWMPSVLGLFPGA 281
Query: 107 VMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPL 9
V+ T T L++ L WKN S++P IV L
Sbjct: 280 VISTFSTSTDLQLKRLRWKNFAFLSVMPRIVAL 182
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 129 bits (276), Expect(2) = 2e-053
Identities = 45/81 (55%), Positives = 63/81 (77%)
Frame = +1 / +3
Query: 253 CGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENI 432
CGPG GISVG LGRYKDEKDV D+ V +C ++ TNG+RIKSYED++S L A+ ++++
Sbjct: 12 CGPGHGISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDV 191
Query: 433 RMEEVANPIIIDQYFCPQKVC 495
+M+ V+ PI+IDQ +CP +C
Sbjct: 192 KMDNVSYPIVIDQKYCPNNIC 254
Score = 101 bits (215), Expect(2) = 2e-053
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1 / +3
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 681
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 258 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 437
Query: 682 CSNAKGTAKGSLQALDCL 735
C NA GT+ ++ L CL
Sbjct: 438 CKNAVGTSVNVVKELACL 491
Score = 73.9 bits (155), Expect(2) = 6e-025
Identities = 37/80 (46%), Positives = 42/80 (52%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ +WSM MG T SI S + A+S D SSYDL+R+PLV L Q
Sbjct: 253 QMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYDLIRSPLVAPLMVQLVTWMSS 74
Query: 314 XXXXXXXRPRQPTLMPCPGP 255
RPR PTLMP PGP
Sbjct: 73 TSFSSLYRPRLPTLMPWPGP 14
Score = 61.6 bits (128), Expect(2) = 6e-025
Identities = 31/62 (50%), Positives = 35/62 (56%)
Frame = -1 / -1
Query: 701 VPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMET 522
VP A L TAMVLLF+P Y LT S P G + Q +TASGV +VP M K S T
Sbjct: 457 VPTAFLQTAMVLLFVPVYLRLTLTSCRPWQGTLLTQLSVTASGVAEVPTMFLKTMSATTT 278
Query: 521 CE 516
E
Sbjct: 277 LE 272
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 131 bits (280), Expect(2) = 4e-053
Identities = 47/92 (51%), Positives = 66/92 (71%)
Frame = +1 / -2
Query: 220 GSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESV 399
G+ V + CGPG GISVG LGRYKDEK V D+ V +C ++ TNG+RIKSYED++S
Sbjct: 630 GTKXVKIXGXRCGPGHGISVGSLGRYKDEKXVEDIQVTNCTIKGATNGLRIKSYEDSKSA 451
Query: 400 LTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
L A+ ++++RM+ V+ PI+IDQ +CP +C
Sbjct: 450 LRATRFVYDDVRMDNVSYPIVIDQKYCPNNIC 355
Score = 98.7 bits (209), Expect(2) = 4e-053
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +1 / -2
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 681
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 351 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 172
Query: 682 CSNAKGTAKGSLQALDCL 735
C NA G + ++ L CL
Sbjct: 171 CKNAVGKSVNVVKELACL 118
Score = 78.0 bits (164), Expect(2) = 1e-025
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = -3 / +1
Query: 540 DVLDGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGRREHRLGILVRLDAHA 361
D + D G A GAD++GA +LVDDDGVG ++HP V+ E G E RLG+LVRLD
Sbjct: 310 DDVGDDHLGGAGGLGADVVGAVLLVDDDGVGDVVHPHVVVHEAGGPERRLGVLVRLDPEP 489
Query: 360 VGGVPKHAIPH 328
VGG A+ H
Sbjct: 490 VGGALDGAVGH 522
Score = 59.7 bits (124), Expect(2) = 1e-025
Identities = 30/62 (48%), Positives = 34/62 (54%)
Frame = -1 / +2
Query: 701 VPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMET 522
+P A L TAMVLL +P Y LT S P G + Q +TASGV DVP M K S T
Sbjct: 152 LPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASGVADVPTMFLKTMSATTT 331
Query: 521 CE 516
E
Sbjct: 332 LE 337
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 113 bits (241), Expect(2) = 9e-048
Identities = 40/74 (54%), Positives = 57/74 (77%)
Frame = +1 / +1
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 453
SVG LGRYKDEKDV D+ V +C ++ TNG+RIKSYED++S L A+ ++++RM+ V+
Sbjct: 1 SVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSY 180
Query: 454 PIIIDQYFCPQKVC 495
PI+IDQ +CP +C
Sbjct: 181 PIVIDQKYCPNNIC 222
Score = 98.7 bits (209), Expect(2) = 9e-048
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +1 / +1
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 681
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 226 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 405
Query: 682 CSNAKGTAKGSLQALDCL 735
C NA G + ++ L CL
Sbjct: 406 CKNAVGKSVNVVKELACL 459
>gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0442_H04_O08, mRNA
sequence
Length = 632
Score = 139 bits (298), Expect(3) = 2e-047
Identities = 56/134 (41%), Positives = 82/134 (61%)
Frame = +1 / +3
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
++ G+ L N FH++ D+ + + APAD NTDG+H+ SS ++IT++ I TG
Sbjct: 12 SVQGVTLQNGPQFHLSFTRCVDVKANFLRVVAPADSPNTDGIHLNDSSRIQITDNLISTG 191
Query: 196 DDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIK 375
DDCVS+ V V +I+CGPG GIS+G LG+ + V V V C+L NTTNGVRIK
Sbjct: 192 DDCVSMVGNCSDVRVRDISCGPGHGISIGSLGKNRTTDRVESVRVDTCLLTNTTNGVRIK 371
Query: 376 SYEDAESVLTASHL 417
S++ + + S +
Sbjct: 372 SWQGGDGLCPRSEV 413
Score = 72.5 bits (152), Expect(3) = 3e-023
Identities = 37/89 (41%), Positives = 44/89 (49%)
Frame = -1 / -2
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
L+RTPLVV +S Q PR P L+P PGP M T T ++TQSS
Sbjct: 370 LIRTPLVVLVSRQVSTLTLSTLSVVRFLPRLPMLIPWPGPHEMSLTRTSEQLPTIDTQSS 191
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGA 108
PV M V+ E+ W PSV SAGA
Sbjct: 190 PVEMRLSVIWMREESLRWMPSVLGLSAGA 104
Score = 46.4 bits (95), Expect(3) = 2e-047
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +1 / +1
Query: 523 VSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNV 645
V ++ V F ++ GTS+T +A+ + CS+T PC+ + L +VN+
Sbjct: 508 VEVRKVEFVDVRGTSATAQAIKIACSDTAPCTELELRNVNL 630
Score = 46.0 bits (94), Expect(3) = 3e-023
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 486 LGAEVLVDDDGVGHLLHPDVLEGEMGRREH 397
L A VLVDDDGVGH+LH D LE ++ R H
Sbjct: 477 LVAVVLVDDDGVGHVLHHDALEPQIAGRAH 388
Score = 43.7 bits (89), Expect(3) = 2e-047
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 403 TASHLTFENIRMEEVANPIIIDQYFCPQ 486
+A L FE+I M+ V+NPIIIDQY+C Q
Sbjct: 394 SARDLRFESIVMKNVSNPIIIDQYYCDQ 477
Score = 28.6 bits (56), Expect(3) = 3e-023
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1 / -1
Query: 641 LTSMSETPLHGCVSEQSRLTASGVDDVP 558
LT +S + +HG VS + L A V DVP
Sbjct: 626 LTFLSSSSVHGAVSLHAILIACAVADVP 543
>gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 5', mRNA sequence
Length = 600
Score = 188 bits (406), Expect = 6e-047
Identities = 73/129 (56%), Positives = 95/129 (73%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI GI L N+KFFH+N+ K + V++V ITAP + NTDG+H+G S +V I + IG
Sbjct: 210 NATIRGITLKNAKFFHLNLFNCKSVLVENVEITAPGNSPNTDGIHMGDSEDVTIKATNIG 389
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPG+ V ++ CGPG GISVG LGRYKDEKDV D+ V +C ++ TNG+R
Sbjct: 390 VGDDCISIGPGTKHVKIHGSRCGPGHGISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLR 569
Query: 370 IKSYEDAES 396
IKSYED++S
Sbjct: 570 IKSYEDSKS 596
Score = 118 bits (253), Expect = 8e-026
Identities = 56/129 (43%), Positives = 70/129 (54%)
Frame = -1 / -3
Query: 395 DSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPG 216
D SSYDL+R+PLV L Q RPR PTL+P PGP + +T +PG
Sbjct: 595 DLESSYDLIRSPLVAPLMVQLVTWMSSTSFSSLYRPRLPTLIPWPGPHREPWILTCLVPG 416
Query: 215 PMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELS 36
PME QSSP PM+ +M T + P W PSV GAV+ T T L++ L WKN
Sbjct: 415 PMEMQSSPTPMLVALMVTSSESPMWMPSVLGLFPGAVISTFSTSTDLQLKRLRWKNFAFL 236
Query: 35 SLIPEIVPL 9
S++P IV L
Sbjct: 235 SVMPRIVAL 209
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 102 bits (218), Expect(2) = 1e-044
Identities = 35/68 (51%), Positives = 52/68 (76%)
Frame = +1 / -2
Query: 292 RYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQ 471
RYKDEKDV D+ V +C ++ TNG+RIKSYED++S L A+ ++++RM+ V+ PI+IDQ
Sbjct: 611 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 432
Query: 472 YFCPQKVC 495
+CP +C
Sbjct: 431 KYCPNNIC 408
Score = 98.7 bits (209), Expect(2) = 1e-044
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +1 / -2
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 681
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 404 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 225
Query: 682 CSNAKGTAKGSLQALDCL 735
C NA G + ++ L CL
Sbjct: 224 CKNAVGKSVNVVKELACL 171
>gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 690
Score = 144 bits (308), Expect(3) = 2e-040
Identities = 59/131 (45%), Positives = 82/131 (62%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I G+ +NS H+ + S + + D ++AP D NTDG+HV SS+V I N+ IG
Sbjct: 98 NVVIQGLTSVNSAGIHVTVQASTGVAIVDTVVSAPGDSPNTDGIHVKQSSDVTIRNAVIG 277
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+ GS V + +TCGPG GIS+G LG ++ V ++TV+ L TTNG+R
Sbjct: 278 TGDDCISMVEGSSDVWIQGVTCGPGHGISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLR 457
Query: 370 IKSYEDAESVL 402
IKS+ A S L
Sbjct: 458 IKSWAKANSGL 490
Score = 34.1 bits (68), Expect(3) = 2e-040
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / +2
Query: 415 LTFENIRMEEVANPIIIDQYFCP 483
+ F ++ M V NPII+DQ +CP
Sbjct: 500 VAFSDVVMRNVRNPIIVDQNYCP 568
Score = 27.2 bits (53), Expect(3) = 2e-040
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 517 SHVSIKDVTFRNISGTSSTP 576
S + I +V++ N+ GTS+TP
Sbjct: 599 SGIKITNVSYTNVEGTSATP 658
>gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23c18 3', mRNA sequence
Length = 716
Score = 93.6 bits (198), Expect(3) = 2e-037
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +1 / -3
Query: 133 DGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKD 312
+G+H+ S +V++ + I TGDDCVSI G+ + V+ + CGPG GIS+G LG +
Sbjct: 681 NGIHITRSKDVQVKDCVIKTGDDCVSIENGTHNLFVSKVVCGPGHGISIGSLGDDNSRAE 502
Query: 313 VSDVTVRDCVLRNTTNGVRIKSYE 384
VS +T+ L TTNG RIK+++
Sbjct: 501 VSGITIDSVQLYGTTNGARIKTWQ 430
Score = 63.4 bits (132), Expect(3) = 2e-037
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1 / -3
Query: 496 PGKRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTM 675
P R S V + +V F+NI GT+ + +A+ L CS + CS + L ++N++ G T
Sbjct: 327 PCNRGQGSAVEVSNVVFKNIRGTTVSKDAIKLSCSHSISCSDIVLENINLKMEGGKGDTE 148
Query: 676 AVCSNAKGTAKGSLQALDC 732
+ C NAK G++ C
Sbjct: 147 STCQNAKWQESGTVIPQPC 91
Score = 38.6 bits (78), Expect(3) = 2e-037
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 406 ASHLTFENIRMEEVANPIIIDQYFC 480
A +TF+N+ M+ V NPIIIDQ +C
Sbjct: 414 AKDITFQNMVMDNVQNPIIIDQNYC 340
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 123 bits (264), Expect(2) = 6e-037
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = +1 / -2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ ++ V++KDV+F+NI+GTSSTPEAVSLLCSE +PC GV++ DV +EY+GKNNKTMAVC
Sbjct: 483 KGDADRVTVKDVSFKNITGTSSTPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMAVC 304
Query: 685 SNAKGTAKGSLQALDCLV*SMTLHL 759
S+ K TA G +A C * MT L
Sbjct: 303 SHVKVTATGVDKANTCAA*PMTPRL 229
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 40/63 (63%), Positives = 43/63 (68%)
Frame = -1 / +2
Query: 710 PLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSL 531
P+AV L HTAMVLLFLP YS LTS TP G SEQSRLTASGV++VP M TSL
Sbjct: 278 PVAVTLTWEHTAMVLLFLPEYSILTSDIVTPSQGFFSEQSRLTASGVEEVPVMFLNETSL 457
Query: 530 MET 522
T
Sbjct: 458 TVT 466
Score = 51.9 bits (107), Expect(2) = 6e-037
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +1 / -2
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
AS +T+EN++ME+ PIIIDQ +CP K+C K
Sbjct: 579 ASKITYENVKMEDSGYPIIIDQKYCPNKLCTSK 481
Score = 45.5 bits (93), Expect(2) = 2e-022
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -3 / +1
Query: 507 SLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMG 409
+L GA +GA +LVDD+GV +LH DVL G++G
Sbjct: 478 ALGGAKFVGAVLLVDDNGVARVLHLDVLVGDLG 576
>gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivum cDNA clone OV102E15, mRNA
sequence
Length = 693
Score = 98.7 bits (209), Expect(3) = 3e-035
Identities = 43/86 (50%), Positives = 53/86 (61%)
Frame = +1 / +3
Query: 127 NTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDE 306
NTDG+HV S+ V IT + IGTGDDCVSI S V + I C PG GIS+G LGR
Sbjct: 6 NTDGIHVAESTAVTITGARIGTGDDCVSISNASFAVKMKGIVCDPGHGISIGSLGRGGSY 185
Query: 307 KDVSDVTVRDCVLRNTTNGVRIKSYE 384
V VT+ D + NGVRIK+++
Sbjct: 186 AAVEGVTLDDARISRAQNGVRIKTWQ 263
Score = 53.3 bits (110), Expect(3) = 3e-035
Identities = 18/46 (39%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNV 645
+ +S+V++ +V +RNISGT++ EA+ CS+ PCS + L ++N+
Sbjct: 375 NQTSNVAVSNVAYRNISGTATRDEAIKFACSDAVPCSDIVLSNINL 512
Score = 35.9 bits (72), Expect(3) = 3e-035
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1 / +3
Query: 412 HLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVS 528
++ F N+ +E V +PIIIDQ++C + ++++ VS
Sbjct: 285 NVRFSNVLVEAVDHPIIIDQFYCDARTACANQTSNVAVS 401
>gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivum cDNA clone OV102K13, mRNA
sequence
Length = 695
Score = 98.7 bits (209), Expect(3) = 3e-035
Identities = 43/86 (50%), Positives = 53/86 (61%)
Frame = +1 / +3
Query: 127 NTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDE 306
NTDG+HV S+ V IT + IGTGDDCVSI S V + I C PG GIS+G LGR
Sbjct: 6 NTDGIHVAESTAVTITGARIGTGDDCVSISNASFAVKMKGIVCDPGHGISIGSLGRGGSY 185
Query: 307 KDVSDVTVRDCVLRNTTNGVRIKSYE 384
V VT+ D + NGVRIK+++
Sbjct: 186 AAVEGVTLDDARISRAQNGVRIKTWQ 263
Score = 53.3 bits (110), Expect(3) = 3e-035
Identities = 18/46 (39%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNV 645
+ +S+V++ +V +RNISGT++ EA+ CS+ PCS + L ++N+
Sbjct: 375 NQTSNVAVSNVAYRNISGTATRDEAIKFACSDAVPCSDIVLSNINL 512
Score = 35.9 bits (72), Expect(3) = 3e-035
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1 / +3
Query: 412 HLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVS 528
++ F N+ +E V +PIIIDQ++C + ++++ VS
Sbjct: 285 NVRFSNVLVEAVDHPIIIDQFYCDARTACANQTSNVAVS 401
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 119 bits (255), Expect(2) = 8e-035
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +1 / -3
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ ++ V++KDVTF+NI+GTS+TPEAVSLLCSE +PC GV++ DV +EY+GKNNKTM VC
Sbjct: 603 KGDADRVTVKDVTFKNITGTSATPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMTVC 424
Query: 685 SNAKGTAKGSLQALDCLV*SMTLHLHAFFFRFTFPYS 795
++ K TA G +A C *++ F FP+S
Sbjct: 423 THVKVTATGVDKANTCDA*TIIPPCAT*FLFSVFPFS 313
Score = 48.7 bits (100), Expect(2) = 8e-035
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1 / -3
Query: 400 LTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
L AS + +ENI M++ PIIIDQ +CP K+C K
Sbjct: 705 LVASKIHYENIEMDDSGYPIIIDQKYCPNKLCTSK 601
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 128 bits (275), Expect(2) = 4e-034
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / -2
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
GTGDDC+SIG G+ + + + CGPG G+SVG LGRY E DV+ + V D + T NGV
Sbjct: 676 GTGDDCISIGQGNHNIYIARVHCGPGHGMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGV 497
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++E++ + A+ + FEN+ M++V PIIIDQ +CP C
Sbjct: 496 RIKTWENSPTKSFAARMLFENMVMKDVQTPIIIDQKYCPYYNC 368
Score = 37.3 bits (75), Expect(2) = 4e-034
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLC 597
S V+I+D+ F+NI GTS+ P AV L C
Sbjct: 352 SGVTIEDIKFKNIKGTSTLPVAVLLRC 272
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 93.6 bits (198), Expect(2) = 3e-033
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +1 / -2
Query: 535 DVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS 714
D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAVC NA G +
Sbjct: 405 DIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGKSVNV 226
Query: 715 LQALDCL 735
++ L CL
Sbjct: 225 VKELACL 205
Score = 72.1 bits (151), Expect(2) = 3e-033
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNST 183
N TI GI L N+KFFH+N+ K + V++V ITAP + NTDG+H+G S +V I T
Sbjct: 575 NATIRGITLKNAKFFHLNLFNCKSVLVENVEITAPGNSPNTDGIHMGDSEDVTIKAPT 402
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 101 bits (215), Expect(2) = 1e-032
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1 / -2
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 681
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 401 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 222
Query: 682 CSNAKGTAKGSLQALDCL 735
C NA GT+ ++ L CL
Sbjct: 221 CKNAVGTSVNVVKELACL 168
Score = 59.7 bits (124), Expect(2) = 1e-032
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +1 / -2
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IKSYED++S L A+ +++++M+ V+ PI+IDQ +CP +C
Sbjct: 530 IKSYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNIC 405
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 101 bits (215), Expect(2) = 2e-031
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1 / +2
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAV 681
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L++VN++Y G NNKTMAV
Sbjct: 125 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAV 304
Query: 682 CSNAKGTAKGSLQALDCL 735
C NA GT+ ++ L CL
Sbjct: 305 CKNAVGTSVNVVKELACL 358
Score = 55.6 bits (115), Expect(2) = 2e-031
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = +1 / +2
Query: 376 SYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
SYED++S L A+ +++++M+ V+ PI+IDQ +CP +C
Sbjct: 2 SYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNIC 121
>gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 3', mRNA sequence
Length = 619
Score = 102 bits (218), Expect(2) = 3e-031
Identities = 35/68 (51%), Positives = 52/68 (76%)
Frame = +1 / -2
Query: 292 RYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQ 471
RYKDEKDV D+ V +C ++ TNG+RIKSYED++S L A+ ++++RM+ V+ PI+IDQ
Sbjct: 618 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 439
Query: 472 YFCPQKVC 495
+CP +C
Sbjct: 438 KYCPNNIC 415
Score = 53.8 bits (111), Expect(2) = 3e-031
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / -2
Query: 502 KRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSL 630
K +S V + D+ F+NI GTS+TPEAV+L C PC G+ L
Sbjct: 411 KAPGASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQL 283
>gb|CK207586.1|CK207586 FGAS019223 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 91.8 bits (194), Expect(3) = 1e-030
Identities = 42/124 (33%), Positives = 63/124 (50%)
Frame = +1 / +2
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
++ G+ L NS+ H+ ++ + +T+P + GV V S+NV I N G
Sbjct: 170 SVKGLTLQNSQRQHLVFTRCYNVEANYLRVTSPEYSPGSGGVLVVSSTNVHIKNDLFSVG 349
Query: 196 DDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIK 375
D VSI V + I+CGPG GIS+G LG + + + + NT NGVR+K
Sbjct: 350 GDSVSIVGNCSDVRLRAISCGPGLGISIGGLGENQSSHKIEKIKTDTMFISNTKNGVRVK 529
Query: 376 SYED 387
+YED
Sbjct: 530 TYED 541
Score = 48.7 bits (100), Expect(3) = 1e-030
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +1 / +2
Query: 511 NSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
N S V+++++ + +I+GTS+T A++ CS+ PC + L VN++ AG
Sbjct: 662 NGSAVAVENINYIDITGTSATERALTFACSDAMPCKRLYLDGVNLKTAG 808
Score = 31.8 bits (63), Expect(3) = 1e-030
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 406 ASHLTFENIRMEEVANPIIIDQYF 477
A + F I M VANPI+IDQ++
Sbjct: 554 ARKVKFAQIMMRNVANPIVIDQHY 625
>gb|DR736658.1|DR736658 FGAS082028 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 88.1 bits (186), Expect(3) = 2e-029
Identities = 42/124 (33%), Positives = 60/124 (48%)
Frame = +1 / -3
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
++ G L S+ H ++ + +T+P T GV V S+NV I N G
Sbjct: 930 SVKGSTLQTSQRQHFVFTRXYNVEANYLRVTSPEYSPRTAGVLVVSSTNVHIKNDLFSVG 751
Query: 196 DDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIK 375
D VSI V + I+CGPG GIS+G LG + + + + NT NGVR+K
Sbjct: 750 GDSVSIVGNCSDVRLRAISCGPGLGISIGGLGENQSSHKIEKIKTDTMFISNTKNGVRVK 571
Query: 376 SYED 387
+YED
Sbjct: 570 TYED 559
Score = 48.7 bits (100), Expect(3) = 2e-029
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +1 / -3
Query: 511 NSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
N S V+++++ + +I+GTS+T AV+ CS+ PC + L VN+ AG
Sbjct: 438 NGSAVAVENINYIDITGTSATERAVTFACSDAMPCRRLYLDGVNLTTAG 292
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1 / -3
Query: 406 ASHLTFENIRMEEVANPIIIDQYF 477
A + F I M VANPI+IDQ++
Sbjct: 546 ARKVKFAQIMMRNVANPIVIDQHY 475
>gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2334_A09_A18, mRNA sequence
Length = 488
Score = 120 bits (256), Expect(2) = 3e-029
Identities = 51/122 (41%), Positives = 72/122 (59%)
Frame = +1 / +3
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
+ G+ + N++ H+ + S+ + + + I AP D NTDG+HV S+ V IT + IGTGD
Sbjct: 30 VRGLTVQNAQQMHLTVSRSRGVRLDGMAIQAPGDSPNTDGIHVAESTAVTITGARIGTGD 209
Query: 199 DCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKS 378
DCVSI S V + I C PG GIS+G LGR V VT+ D + NGVRIK+
Sbjct: 210 DCVSISNASFAVKMKGIVCDPGHGISIGSLGRGGSYAAVEGVTLDDARISRAQNGVRIKT 389
Query: 379 YE 384
++
Sbjct: 390 WQ 395
Score = 29.5 bits (58), Expect(2) = 3e-029
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 412 HLTFENIRMEEVANPIIIDQYFC 480
++ F N+ ++ V +PI+ID ++C
Sbjct: 417 NVRFSNVLVDAVDHPIVIDHFYC 485
>gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0923_F04_L07, mRNA sequence
Length = 545
Score = 127 bits (272), Expect = 2e-028
Identities = 55/115 (47%), Positives = 72/115 (62%)
Frame = +1 / +3
Query: 40 NSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGP 219
+S HI + S + + + ITAP D NTDGVH+ S +VR++ STIGTGDDCVSI
Sbjct: 192 DSPQMHIAVSQSSKVHLTQLTITAPGDSPNTDGVHIDRSEDVRVSRSTIGTGDDCVSISS 371
Query: 220 GSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
S V V+ + CGPG GISVG LGR V + V++ NTTNG RIK+++
Sbjct: 372 RSRFVTVDGVVCGPGHGISVGSLGRNGATASVEYIDVKNVHFINTTNGARIKTWQ 536
>gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_E08_J16, mRNA sequence
Length = 472
Score = 126 bits (270), Expect = 3e-028
Identities = 49/91 (53%), Positives = 65/91 (71%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI GI L N+KFFH+N+ K++ V++V ITAP + NTDG+H+G S +V I + IG
Sbjct: 195 NATIRGITLKNAKFFHLNLFNCKNVLVENVEITAPGNSPNTDGIHMGDSEDVTIKATNIG 374
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVG 282
GDDC+SIGPG+ V ++ CGPG GISVG
Sbjct: 375 VGDDCISIGPGTKHVKIHGSRCGPGHGISVG 467
>gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe22h09 5', mRNA sequence
Length = 637
Score = 126 bits (269), Expect = 5e-028
Identities = 54/126 (42%), Positives = 78/126 (61%)
Frame = +1 / +3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
T+ +S NS HI++ S + + + TAP D NTDGVH+ S +VR+T ST+
Sbjct: 168 TDVELSQFSSKNSPQMHISVSQSSKVHLTQLTTTAPWDSPNTDGVHIDRSQDVRVTRSTM 347
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
GTG +CVSIGPGS V V+ I CGPG+ +SVG LGR + V + V++ NT++G
Sbjct: 348 GTGGECVSIGPGSRFVTVDGIVCGPGRAVSVGSLGRKGATESVEYIDVKNVQFINTSSGA 527
Query: 367 RIKSYE 384
IK+++
Sbjct: 528 TIKTWQ 545
>gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aestivum cDNA clone AZO2109E15,
mRNA sequence
Length = 541
Score = 57.0 bits (118), Expect(4) = 2e-027
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +1 / +2
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTV 330
G+GDDCVS+ V V +I+CGPG GIS+G LG+ + V +V V
Sbjct: 11 GSGDDCVSMVGNCSDVRVRDISCGPGHGISIGSLGKNRTADRVENVRV 154
Score = 44.6 bits (91), Expect(4) = 2e-027
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1 / +3
Query: 523 VSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
V ++ V F ++ GTS+T + + CS+T PC+ + L +VN+ G
Sbjct: 336 VEVRKVEFVDVRGTSATARLIKIACSDTAPCTELELRNVNLTAVG 470
Score = 43.7 bits (89), Expect(4) = 2e-027
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 403 TASHLTFENIRMEEVANPIIIDQYFCPQ 486
+A L FE+I M+ V+NPIIIDQY+C Q
Sbjct: 222 SARDLRFESIVMKNVSNPIIIDQYYCDQ 305
Score = 33.6 bits (67), Expect(4) = 2e-027
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 337 CVLRNTTNGVRIKSYE 384
C+L NTTNGVRIKS++
Sbjct: 162 CLLTNTTNGVRIKSWQ 209
>gb|CD936113.1|CD936113 OV.103K18F010205 OV Triticum aestivum cDNA clone OV103K18, mRNA
sequence
Length = 599
Score = 123 bits (264), Expect = 2e-027
Identities = 51/117 (43%), Positives = 70/117 (59%)
Frame = +1 / +3
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
++ G+ L N FH++ D+ + + AP D NTDGVH+ SS V+IT++ I TG
Sbjct: 249 SVQGVTLQNGPKFHLSFTRCVDVKANFLRVVAPGDSPNTDGVHLNDSSRVQITDNLISTG 428
Query: 196 DDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
DDCVS+ V V +I CGPG GIS+G LG+ + V +V V C+ NTTNGV
Sbjct: 429 DDCVSMVGNCSDVRVRDIWCGPGHGISIGSLGKNRTTDRVENVRVDTCLFTNTTNGV 599
>gb|BQ606326.1|BQ606326 BRY_2178 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 626
Score = 88.6 bits (187), Expect(3) = 4e-027
Identities = 39/97 (40%), Positives = 52/97 (53%)
Frame = +1 / +1
Query: 97 VNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGIS 276
+ +T+P T GV V S+NV I N G DCVSI V + I+CGPG GIS
Sbjct: 1 LRVTSPEYSPGTAGVLVVSSTNVHIKNDLFSVGGDCVSIVGNCSDVRLRAISCGPGLGIS 180
Query: 277 VGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYED 387
+G LG + + + + NT NGVR+K+YED
Sbjct: 181 IGGLGENQSSHKIEKIKTDTMFISNTKNGVRVKTYED 291
Score = 43.2 bits (88), Expect(3) = 4e-027
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +1 / +1
Query: 511 NSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
N S V+++++ + +I+GTS+T AV+ CS+ P + L VN+ AG
Sbjct: 412 NGSAVAVENINYIDITGTSATERAVTFACSDAMPGRRLYLDGVNLTTAG 558
Score = 28.6 bits (56), Expect(3) = 4e-027
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYF 477
A + F I M VANPI IDQ++
Sbjct: 304 ARKVKFAQIMMRNVANPIGIDQHY 375
>gb|BE413623.1|BE413623 SCU001.C10.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU001.C10, mRNA sequence
Length = 758
Score = 88.6 bits (187), Expect(3) = 1e-026
Identities = 39/97 (40%), Positives = 52/97 (53%)
Frame = +1 / +1
Query: 97 VNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGIS 276
+ +T+P T GV V S+NV I N G DCVSI V + I+CGPG GIS
Sbjct: 124 LRVTSPEYSPGTAGVLVVSSTNVHIKNDLFSVGGDCVSIVGNCSDVRLRAISCGPGLGIS 303
Query: 277 VGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYED 387
+G LG + + + + NT NGVR+K+YED
Sbjct: 304 IGGLGENQSSHKIEKIKTDTMFISNTKNGVRVKTYED 414
Score = 38.2 bits (77), Expect(3) = 1e-026
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 511 NSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQP 612
N S V+++++ + +I+GTS+T AV+ CS+ P
Sbjct: 535 NGSAVAVENINYIDITGTSATERAVTFACSDAMP 636
Score = 31.8 bits (63), Expect(3) = 1e-026
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYF 477
A + F I M VANPI+IDQ++
Sbjct: 427 ARKVKFAQIMMRNVANPIVIDQHY 498
>gb|AL818374.1|AL818374 AL818374 l:125 Triticum aestivum cDNA clone A01_l125_plate_1, mRNA
sequence
Length = 458
Score = 118 bits (253), Expect = 8e-026
Identities = 51/100 (51%), Positives = 66/100 (66%)
Frame = +1 / +1
Query: 79 DITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCG 258
D+ + + APAD NTD VH+ SS V+IT++ I TGDDCVSI V V +I+CG
Sbjct: 157 DVKANFLRVVAPADSPNTDCVHLNDSSRVQITDNLISTGDDCVSIVGNCSDVRVRDISCG 336
Query: 259 PGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKS 378
PG GIS+G LG+ + V +V V C+L NTT+GVRIKS
Sbjct: 337 PGHGISIGSLGQNRTTDRVQNVRVDTCLLTNTTHGVRIKS 456
>gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA clone E01_d15_plate_7, mRNA
sequence
Length = 566
Score = 73.0 bits (153), Expect(3) = 4e-025
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = +1 / +2
Query: 64 IDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVN 243
+ S + + + ITAP D NTDGVH+ S +VR++ STIGTGDDCVSI S V V+
Sbjct: 17 VSQSSKVHLTQLTITAPGDSPNTDGVHIDRSEDVRVSRSTIGTGDDCVSISSRSRFVTVD 196
Query: 244 NI 249
+
Sbjct: 197 GV 202
Score = 48.3 bits (99), Expect(3) = 4e-025
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1 / +1
Query: 253 CGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
CG G GISVG LGR V + V++ NTTNG RIK+++
Sbjct: 208 CGXGHGISVGSLGRNGATASVEYIDVKNVHFINTTNGARIKTWQ 339
Score = 35.4 bits (71), Expect(3) = 4e-025
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 523 VSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGV 624
V++ ++T++N+ GTS AV CSE C+ +
Sbjct: 460 VALSNITYKNLRGTSKHKTAVDFHCSEIGSCTNI 561
>gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 3', mRNA sequence
Length = 686
Score = 97.7 bits (207), Expect(2) = 8e-025
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1 / -3
Query: 250 TCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFEN 429
T GPG G+SVG LGRY E DV+ + V D + T NGVRIK++E++ + A+ + FEN
Sbjct: 615 TAGPGHGMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGVRIKTWENSPTKSFAARMLFEN 436
Query: 430 IRMEEVANPIIIDQYFCPQKVC 495
+ M++V PIIIDQ +CP C
Sbjct: 435 MVMKDVQTPIIIDQKYCPYYNC 370
Score = 37.3 bits (75), Expect(2) = 8e-025
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLC 597
S V+I+D+ F+NI GTS+ P AV L C
Sbjct: 354 SGVTIEDIKFKNIKGTSTLPVAVLLRC 274
>gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25d18 3', mRNA sequence
Length = 557
Score = 62.0 bits (129), Expect(4) = 3e-023
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +1 / -1
Query: 328 VRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
V D + T NGVRIK++E++ + A+ + FEN+ M++V PIIIDQ +CP C
Sbjct: 410 VTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMKDVQTPIIIDQKYCPYYNC 243
Score = 37.3 bits (75), Expect(4) = 3e-023
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLC 597
S V+I+D+ F+NI GTS+ P AV L C
Sbjct: 227 SGVTIEDIKFKNIKGTSTLPVAVLLRC 147
Score = 37.3 bits (75), Expect(4) = 3e-023
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / -3
Query: 250 TCGPGQGISVGCLGRYKDEKDVSDV 324
T GPG G+SVG GRY E DV+ +
Sbjct: 489 TAGPGHGMSVGSXGRYVGEGDVTSI 415
Score = 27.6 bits (54), Expect(4) = 3e-023
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 205 VSIGPGSDGVMVNNITCGPG 264
+SIG G+ + + + CGPG
Sbjct: 535 ISIGQGNHNIYIARVHCGPG 476
>gb|DR739311.1|DR739311 FGAS084528 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1159
Score = 109 bits (232), Expect = 6e-023
Identities = 47/117 (40%), Positives = 64/117 (54%)
Frame = +1 / +2
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
++ G+ L N FH++ D+ + + APAD NTDG H+ SS V+IT I TG
Sbjct: 686 SVQGVTLQNGPQFHLSFTRCVDVKANFLRVVAPADSPNTDGGHLNDSSRVQITGQLISTG 865
Query: 196 DDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
DDCVS+ V V +I+CGPGQGIS+G LG+ +D + V V GV
Sbjct: 866 DDCVSMVGNCSDVRVRDISCGPGQGISIGSLGKDRDHGQGQEREVGHLVAHQNQQGV 1036
>gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 591
Score = 65.7 bits (137), Expect(3) = 4e-022
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S + I +V++ N+ GTS+TP AV CS ++PC+G+++ +V + Y + + C NA
Sbjct: 352 SGIKITNVSYTNVEGTSATPVAVRFDCSPSRPCTGITMRNVWLGYGERRRAAESFCRNAH 173
Query: 697 GTAKGSLQALDCL 735
G A G + CL
Sbjct: 172 GVAYGQVVPPSCL 134
Score = 43.7 bits (89), Expect(3) = 4e-022
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1 / -1
Query: 271 ISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVL 402
IS+G LG ++ V ++TV+ L TTNG+RIKS+ A S L
Sbjct: 591 ISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLRIKSWAKANSGL 460
Score = 34.1 bits (68), Expect(3) = 4e-022
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 415 LTFENIRMEEVANPIIIDQYFCP 483
+ F ++ M V NPII+DQ +CP
Sbjct: 450 VAFSDVVMRNVRNPIIVDQNYCP 382
>gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA clone B03_d15_plate_17, mRNA
sequence
Length = 430
Score = 90.4 bits (191), Expect(2) = 5e-022
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +1 / +2
Query: 184 IGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNG 363
+GTGDDC+S+ GS V + +TCGPG GIS+G LG ++ V ++TV+ L TTNG
Sbjct: 59 VGTGDDCISMVEGSSDVWIKGVTCGPGHGISIGSLGDTPEQVAVRNITVKAVTLAGTTNG 238
Query: 364 VRIKSYEDAESVL 402
+RIKS+ A S L
Sbjct: 239 LRIKSWAKANSGL 277
Score = 35.0 bits (70), Expect(2) = 5e-022
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 415 LTFENIRMEEVANPIIIDQYFCPQKV 492
+ F ++ M V NPII+DQ +CP V
Sbjct: 287 VAFSDVVMRNVRNPIIVDQNYCPGNV 364
>gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 100 bits (214), Expect(2) = 1e-021
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN T+ G++ ++S+ FH++ S +T + + I APA NTDG+HVG SS+VRI +S I
Sbjct: 488 TNSTVRGLRFVDSRGFHLSFHRSSRVTAEGLRIHAPASSRNTDGIHVGCSSHVRIADSVI 667
Query: 187 GTGDDCVSIGPGS 225
GTGD+CVS+GPGS
Sbjct: 668 GTGDECVSVGPGS 706
Score = 23.5 bits (45), Expect(2) = 1e-021
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 250 TCGPGQGISVGCLGRYKDEKD 312
+ GP GISVG G K +D
Sbjct: 734 SAGPAHGISVGNPGEEKKGED 796
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 692,375,282
Number of Sequences: 636343
Number of extensions: 10265858
Number of successful extensions: 113490
Number of sequences better than 1.0e-020: 50
length of database: 122,413,413
effective HSP length: 54
effective length of database: 88,050,891
effective search space used: 22276875423
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)