TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3185308.2.2
(697 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ254143.1|BJ254143 BJ254143 Y. Ogihara unpublished cDNA... 197 5e-056
gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, compl... 87 4e-034
gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA,... 87 7e-034
gb|AJ611195.1|AJ611195 AJ611195 Triticum turgidum subsp. du... 86 3e-032
gb|DR739498.1|DR739498 FGAS084715 Triticum aestivum FGAS: L... 86 4e-032
gb|AY543533.1| Triticum aestivum expansin EXPA7 mRNA, compl... 86 4e-032
gb|BJ218486.1|BJ218486 BJ218486 Y. Ogihara unpublished cDNA... 86 4e-032
gb|BJ270964.1|BJ270964 BJ270964 Y. Ogihara unpublished cDNA... 80 8e-032
gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: L... 84 1e-030
gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: L... 84 2e-030
gb|CA602791.1|CA602791 wr1.pk0008.h8 wr1 Triticum aestivum ... 80 3e-030
gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: L... 84 7e-030
gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole pla... 84 9e-030
gb|BQ744546.1|BQ744546 WHE4116_G12_N24ZS Wheat salt-stresse... 89 2e-029
gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, comp... 89 2e-029
gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, comp... 89 2e-029
gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, comp... 89 2e-029
gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, compl... 88 4e-029
gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA,... 84 6e-029
gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, compl... 84 6e-029
gb|AY543534.1| Triticum aestivum expansin EXPA8 mRNA, compl... 86 8e-029
gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: L... 127 9e-029
gb|BJ248015.1|BJ248015 BJ248015 Y. Ogihara unpublished cDNA... 105 2e-028
gb|CN011610.1|CN011610 WHE3886_C10_F20ZS Wheat Fusarium gra... 86 2e-028
gb|CD886737.1|CD886737 G118.103C04F010605 G118 Triticum aes... 87 3e-028
gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis... 84 5e-028
gb|CD492147.1|CD492147 WHE2476_H10_O20ZT Triticum monococcu... 73 6e-028
gb|AY589583.1| Triticum aestivum alpha-expansin EXPA1 mRNA,... 79 3e-027
gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA... 73 9e-027
gb|BF201369.1|BF201369 WHE0990_H02_P04ZS Wheat pre-anthesis... 73 3e-026
gb|DR738339.1|DR738339 FGAS083556 Triticum aestivum FGAS: L... 86 4e-026
gb|BJ282446.1|BJ282446 BJ282446 Y. Ogihara unpublished cDNA... 73 4e-026
gb|BJ238210.1|BJ238210 BJ238210 Y. Ogihara unpublished cDNA... 73 3e-025
gb|CD894504.1|CD894504 G118.126G10F010823 G118 Triticum aes... 92 1e-024
gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDN... 84 1e-024
gb|CK205372.1|CK205372 FGAS016850 Triticum aestivum FGAS: L... 71 5e-024
gb|AJ611080.1|AJ611080 AJ611080 Triticum turgidum subsp. du... 89 5e-024
gb|BE427226.1|BE427226 PSR6138 ITEC PSR Wheat Pericarp/Test... 89 6e-024
gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA... 68 7e-024
gb|BJ270401.1|BJ270401 BJ270401 Y. Ogihara unpublished cDNA... 78 2e-023
gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthe... 68 6e-023
gb|AJ612348.1|AJ612348 AJ612348 Triticum turgidum subsp. du... 86 1e-022
gb|BQ839416.1|BQ839416 WHE4165_H03_P05ZS Wheat CS whole pla... 105 4e-022
gb|BQ295118.1|BQ295118 WHE2858_D11_H22ZS Wheat unstressed r... 105 5e-022
gb|BE427223.1|BE427223 PSR6135 ITEC PSR Wheat Pericarp/Test... 89 2e-021
>gb|BJ254143.1|BJ254143 BJ254143 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4j04 3', mRNA sequence
Length = 679
Score = 197 bits (424), Expect(2) = 5e-056
Identities = 78/103 (75%), Positives = 86/103 (83%)
Frame = -1 / -3
Query: 499 VACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLWTTE 320
V C GGIRYTITGN++++ V VTNVGGAGDV AL VKGNKRVKWT ++R+WGQ+W T
Sbjct: 455 VPCAKLGGIRYTITGNKYFNMVAVTNVGGAGDVAALKVKGNKRVKWTLLQRNWGQVWQTS 276
Query: 319 VDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF* 191
DLTGESLTFRVMT DHRK TSWHV PRDWQFG TYQA KNF*
Sbjct: 275 EDLTGESLTFRVMTGDHRKHTSWHVLPRDWQFGVTYQAPKNF* 147
Score = 144 bits (310), Expect(2) = 2e-037
Identities = 64/104 (61%), Positives = 69/104 (66%)
Frame = +3 / +1
Query: 192 *KFLVAWYVLPNCQSRGVTCQEVALRWSAVMTRNVSDSPVRSTSVVQSWPQLRFIGVHLT 371
*KFL AW V PNCQSRG TCQ+V LRWS VMTRNVSDSPVRS+ V +WPQLR VHLT
Sbjct: 148 *KFLGAW*VTPNCQSRGRTCQDVCLRWSPVMTRNVSDSPVRSSEVCHTWPQLRCNNVHLT 327
Query: 372 RLLPFTHXXXXXXXXXXLVTFTSL*CWFPVIVYRMPPFXXHATL 503
RL PFT VT T L FPVIVYR+PP T+
Sbjct: 328 RLFPFTLSAATSPAPPTFVTATMLKYLFPVIVYRIPPSFAQGTV 459
Score = 116 bits (249), Expect(2) = 8e-029
Identities = 58/103 (56%), Positives = 63/103 (61%)
Frame = +2 / +3
Query: 191 LEVLGGLVRFAELPVAGRDVPGGSLAVVGGHDAERQRLAGEVDLRGPELAPAALHRRPLD 370
LEVLG LV +LPV DVPG LA+V GHDAER+RLAGEV P LAP AL +RPLD
Sbjct: 147 LEVLGCLVGDTKLPVPREDVPGRVLAMVAGHDAERERLAGEVLGGLPHLAPVALQQRPLD 326
Query: 371 ALVALHPQRHHVPXXXXXXXXXXXXXXXPCDRVPDAAFPXARH 499
ALV LH +R HVP P DRVPD A ARH
Sbjct: 327 ALVPLHLERRHVPRSAHVRHRHHVEVFVPRDRVPDPAQLRARH 455
Score = 41.8 bits (85), Expect(2) = 5e-056
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1 / -3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRK 500
EH L + AFL+IA KAGIVPI+YR+
Sbjct: 554 EHLDLTMPAFLQIAEEKAGIVPISYRR 474
Score = 32.2 bits (64), Expect(2) = 2e-037
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 513 MGTMPAXXXAILRNAXMXXXKCS 581
MGTMPA AI R A M +CS
Sbjct: 487 MGTMPAFSSAICRKAGMVRSRCS 555
Score = 30.9 bits (61), Expect(2) = 8e-029
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 505 GR*WARCRPXPXRS*GTPVXXXQSAR 582
G WA+CRP P RS G P AR
Sbjct: 479 GTRWAQCRPSPPRSAGRPAW*GPGAR 556
>gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, complete cds
Length = 1013
Score = 87.2 bits (184), Expect(2) = 4e-034
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FL +A +AGIVP++YR+VAC GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 476 HFDLAMPMFLHMAQYRAGIVPVSYRRVACRKSGGVRFTINGFRYFNLVLITNVAGAGDLV 655
Query: 397 ALWVKGN 377
VKG+
Sbjct: 656 RASVKGS 676
Score = 78.5 bits (165), Expect(2) = 4e-034
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G++L+FRV +D R +TSW+ P++W+FG+T++
Sbjct: 686 WMPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNAAPQNWRFGRTFE 841
>gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA, partial cds
Length = 932
Score = 87.2 bits (184), Expect(2) = 7e-034
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FL +A +AGIVP++YR+VAC GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 69 HFDLAMPMFLHMAQYRAGIVPVSYRRVACRKSGGVRFTINGFRYFNLVLITNVAGAGDLV 248
Query: 397 ALWVKGN 377
VKG+
Sbjct: 249 RASVKGS 269
Score = 77.6 bits (163), Expect(2) = 7e-034
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G++L+FRV +D R +TSW+ P+ W+FG+T++
Sbjct: 279 WMPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNAAPQSWRFGQTFE 434
>gb|AJ611195.1|AJ611195 AJ611195 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04443R, mRNA
sequence
Length = 565
Score = 85.8 bits (181), Expect(2) = 3e-032
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV
Sbjct: 104 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVR 283
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 284 SVKIKGTE 307
Score = 73.5 bits (154), Expect(2) = 3e-032
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 314 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTXTNFNVVPKDWEFGKTY 466
>gb|DR739498.1|DR739498 FGAS084715 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1110
Score = 85.8 bits (181), Expect(2) = 4e-032
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV
Sbjct: 148 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVR 327
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 328 SVKIKGTE 351
Score = 73.0 bits (153), Expect(2) = 4e-032
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 358 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 510
>gb|AY543533.1| Triticum aestivum expansin EXPA7 mRNA, complete cds
Length = 1031
Score = 85.8 bits (181), Expect(2) = 4e-032
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV
Sbjct: 450 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVR 629
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 630 SVKIKGTE 653
Score = 73.0 bits (153), Expect(2) = 4e-032
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 660 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 812
>gb|BJ218486.1|BJ218486 BJ218486 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh37o17 3', mRNA sequence
Length = 614
Score = 85.8 bits (181), Expect(2) = 4e-032
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = -1 / -1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV
Sbjct: 497 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVR 318
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 317 SVKIKGTE 294
Score = 73.0 bits (153), Expect(2) = 4e-032
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / -1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 287 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 135
>gb|BJ270964.1|BJ270964 BJ270964 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh23h21 5', mRNA sequence
Length = 587
Score = 80.3 bits (169), Expect(2) = 8e-032
Identities = 31/59 (52%), Positives = 45/59 (76%)
Frame = -1 / +2
Query: 553 FLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
FL +A +AGIVP++YR+VAC GG+R+TI G ++++ V +TNV GAGD+V VKG+
Sbjct: 2 FLHMAQYRAGIVPVSYRRVACRKSGGVRFTINGFRYFNLVLITNVAGAGDLVRASVKGS 178
Score = 77.6 bits (163), Expect(2) = 8e-032
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G++L+FRV +D R +TSW+ P+ W+FG+T++
Sbjct: 188 WMPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNAAPQSWRFGQTFE 343
>gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 84.0 bits (177), Expect(2) = 1e-030
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 467 HFDMAEPAYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 646
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 647 SVAIKGS 667
Score = 70.3 bits (147), Expect(2) = 1e-030
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + DL G+SL+FRV +D R TS +V P W FG+T++ ++
Sbjct: 677 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNVAPAGWAFGQTFEGSQ 841
>gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1109
Score = 84.0 bits (177), Expect(2) = 2e-030
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 483 HFDMAEPAYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 662
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 663 SVAIKGS 683
Score = 69.3 bits (145), Expect(2) = 2e-030
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + DL G+SL+FRV +D R TS H P W G+T++ +
Sbjct: 693 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSKHAAPAGWSLGQTFEGAQ 857
>gb|CA602791.1|CA602791 wr1.pk0008.h8 wr1 Triticum aestivum cDNA clone wr1.pk0008.h8 5'
end, mRNA sequence
Length = 512
Score = 79.9 bits (168), Expect(2) = 3e-030
Identities = 31/65 (47%), Positives = 47/65 (72%)
Frame = -1 / +2
Query: 568 LXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALW 389
L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV ++
Sbjct: 5 LPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVRSVK 184
Query: 388 VKGNK 374
+KG +
Sbjct: 185 IKGTE 199
Score = 73.0 bits (153), Expect(2) = 3e-030
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 206 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 358
>gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 84.0 bits (177), Expect(2) = 7e-030
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 477 HFDMAEPAYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 656
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 657 SVAIKGS 677
Score = 67.5 bits (141), Expect(2) = 7e-030
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + DL G+SL+FRV +D R TS + P W FG+T++ +
Sbjct: 687 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWVFGQTFEGAQ 851
>gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_D06_H11, mRNA sequence
Length = 631
Score = 84.0 bits (177), Expect(2) = 9e-030
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 270 HFDMAEPAYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 449
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 450 SVAIKGS 470
Score = 67.0 bits (140), Expect(2) = 9e-030
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKT 215
W M R+WGQ W + DL G+SL+FRV +D R TS +V P W FG+T
Sbjct: 480 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNVAPAGWAFGQT 629
>gb|BQ744546.1|BQ744546 WHE4116_G12_N24ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4116_G12_N24, mRNA sequence
Length = 747
Score = 88.6 bits (187), Expect(2) = 2e-029
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -1 / -3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L F KIA +AG+VP+ YR+V C GGIR+TITG+ +++ V +TNV GAGD+
Sbjct: 700 HFDLAEPMFTKIAQARAGVVPVQYRRVVCVKTGGIRFTITGHSYFNLVLITNVAGAGDLT 521
Query: 397 ALWVK 383
A++VK
Sbjct: 520 AVYVK 506
Score = 61.6 bits (128), Expect(2) = 2e-029
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -1 / -3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M +WG W L G+ L+FRV T+D R TS +V P W FG+TY ++
Sbjct: 490 WLTMSHNWGANWQNGAMLNGQPLSFRVTTSDGRTITSNNVAPSGWSFGQTYAGSQ 326
>gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, complete cds
Length = 1246
Score = 88.6 bits (187), Expect(2) = 2e-029
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL IA +AGIVP++YR+V C KGGIR+TI G+ +++ V VTNV GAGD
Sbjct: 426 HFDMAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDAR 605
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 606 SVSIKGTR 629
Score = 61.1 bits (127), Expect(2) = 2e-029
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++ +
Sbjct: 627 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQ 800
>gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, complete cds
Length = 1226
Score = 88.6 bits (187), Expect(2) = 2e-029
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL IA +AGIVP++YR+V C KGGIR+TI G+ +++ V VTNV GAGD
Sbjct: 427 HFDMAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDAR 606
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 607 SVSIKGTR 630
Score = 61.1 bits (127), Expect(2) = 2e-029
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -1 / +1
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++ +
Sbjct: 628 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAE 801
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds
Length = 1201
Score = 88.6 bits (187), Expect(2) = 2e-029
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL IA +AGIVP++YR+V C KGGIR+TI G+ +++ V VTNV GAGD
Sbjct: 427 HFDMAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDAR 606
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 607 SVSIKGTR 630
Score = 61.1 bits (127), Expect(2) = 2e-029
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -1 / +1
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++ +
Sbjct: 628 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAE 801
>gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, complete cds
Length = 1265
Score = 87.7 bits (185), Expect(2) = 4e-029
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V VTNV GAGD
Sbjct: 426 HFDMAEPAFLHIAQHRAGIVPVPYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDAR 605
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 606 SVSIKGTR 629
Score = 61.1 bits (127), Expect(2) = 4e-029
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++ +
Sbjct: 627 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQ 800
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds
Length = 1142
Score = 84.0 bits (177), Expect(2) = 6e-029
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 426 HFDMAEPAYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 605
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 606 SVAIKGS 626
Score = 64.3 bits (134), Expect(2) = 6e-029
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = -1 / +3
Query: 355 MKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
M R+WGQ W + DL G+SL+FRV +D R TS + P W FG+T++ +
Sbjct: 645 MARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQ 800
>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds
Length = 1106
Score = 83.5 bits (176), Expect(2) = 6e-029
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 429 HFDMAEPAYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 608
Query: 397 ALWVKG 380
++ +KG
Sbjct: 609 SVAIKG 626
Score = 64.8 bits (135), Expect(2) = 6e-029
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R WGQ W + DL G+S +FRV +D R TS + P W FG+T++ +
Sbjct: 639 WQAMARIWGQNWQSNADLDGQSFSFRVTFSDGRTVTSNNAAPAGWSFGQTFEGAQ 803
>gb|AY543534.1| Triticum aestivum expansin EXPA8 mRNA, complete cds
Length = 1005
Score = 85.8 bits (181), Expect(2) = 8e-029
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L F KIA +AG+VP+ YR+V C GIR+TITG+ +++ V +TNV GAGD+
Sbjct: 439 HFDLAEPMFTKIAQARAGVVPVQYRRVVCVKTSGIRFTITGHSYFNLVLITNVAGAGDLT 618
Query: 397 ALWVK 383
A++VK
Sbjct: 619 AVYVK 633
Score = 62.0 bits (129), Expect(2) = 8e-029
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M +WG W L G+ L+FRV T+D R TS +V P W FG+TY ++
Sbjct: 649 WLTMSHNWGANWQNGAMLNGQPLSFRVTTSDGRTTTSNNVAPSGWSFGQTYAGSQ 813
>gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1135
Score = 127 bits (273), Expect = 9e-029
Identities = 48/109 (44%), Positives = 70/109 (64%)
Frame = -1 / -1
Query: 526 GIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKR 347
G+VP++YR+VAC KGGIR+TI G+ +++ V VTNVGG GDV A+ VK + W + R
Sbjct: 859 GMVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVHAVSVKSTRSAAWQSLSR 680
Query: 346 SWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
+WGQ W + L G+ L+FRV + + S + PR W FG+T+ +
Sbjct: 679 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQ 533
>gb|BJ248015.1|BJ248015 BJ248015 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4j04 5', mRNA sequence
Length = 679
Score = 105 bits (223), Expect(2) = 2e-028
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -1 / +3
Query: 499 VACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLW 329
V C GGIRYTITGN++++ V VTNVGGAGDV AL VKGNKRVKWT ++R+WGQ+W
Sbjct: 507 VPCAKLGGIRYTITGNKYFNMVAVTNVGGAGDVAALKVKGNKRVKWTLLQRNWGQVW 677
Score = 41.8 bits (85), Expect(2) = 2e-028
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1 / +3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRK 500
EH L + AFL+IA KAGIVPI+YR+
Sbjct: 408 EHLDLTMPAFLQIAEEKAGIVPISYRR 488
>gb|CN011610.1|CN011610 WHE3886_C10_F20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_C10_F20,
mRNA sequence
Length = 568
Score = 86.3 bits (182), Expect(2) = 2e-028
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL IA +AGIVP++YR+V C KGGIR+TI G+ +++ V VTNV GAGD
Sbjct: 195 HFDMAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDAR 374
Query: 397 ALWVKGNK 374
++ + G +
Sbjct: 375 SVSINGTR 398
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++
Sbjct: 396 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFE 560
>gb|CD886737.1|CD886737 G118.103C04F010605 G118 Triticum aestivum cDNA clone G118103C04,
mRNA sequence
Length = 508
Score = 87.2 bits (184), Expect(2) = 3e-028
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FL +A +AGIVP++YR+VAC GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 171 HFDLAMPMFLHMAQYRAGIVPVSYRRVACRKSGGVRFTINGFRYFNLVLITNVAGAGDLV 350
Query: 397 ALWVKGN 377
VKG+
Sbjct: 351 RASVKGS 371
Score = 58.8 bits (122), Expect(2) = 3e-028
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTP 239
W PM R+WGQ W + L G++L+FRV +D R ++SW+ P
Sbjct: 381 WMPMSRNWGQNWQSNAILVGQALSFRVTXSDRRTSSSWNAEP 506
>gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0975_G03_M05, mRNA sequence
Length = 464
Score = 84.0 bits (177), Expect(2) = 5e-028
Identities = 33/61 (54%), Positives = 46/61 (75%)
Frame = -1 / +3
Query: 556 AFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
AFL IA +AGIVP++YR+V C KGGIR+TI G+ +++ V VTNV GAGD ++ +KG
Sbjct: 3 AFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGT 182
Query: 376 K 374
+
Sbjct: 183 R 185
Score = 61.1 bits (127), Expect(2) = 5e-028
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++ +
Sbjct: 183 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQ 356
>gb|CD492147.1|CD492147 WHE2476_H10_O20ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2476_H10_O20, mRNA sequence
Length = 749
Score = 73.0 bits (153), Expect(3) = 6e-028
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / -1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 533 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 381
Score = 59.3 bits (123), Expect(3) = 6e-028
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -1 / -2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSE 437
HF L I AF KIA KAG++PI YR+V C +GG+R++ +G S+
Sbjct: 742 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSFSGKSSSSQ 602
Score = 30.4 bits (60), Expect(3) = 6e-028
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1 / -1
Query: 451 QHYSEVKVTNVGGAGDVVALWVKGNK 374
+ + V ++NVGGAGDV ++ +KG +
Sbjct: 617 EFFFTVLISNVGGAGDVRSVKIKGTE 540
>gb|AY589583.1| Triticum aestivum alpha-expansin EXPA1 mRNA, complete cds
Length = 965
Score = 78.5 bits (165), Expect(2) = 3e-027
Identities = 27/69 (39%), Positives = 47/69 (68%)
Frame = -1 / +2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + A+L I + GIVP+ Y++V C KGG+R+T+ G+ ++ V V+NVGG G +
Sbjct: 416 QHFDMAEPAWLNIGVYRGGIVPVLYQRVPCAKKGGVRFTVNGHDYFELVLVSNVGGVGSI 595
Query: 400 VALWVKGNK 374
++ +KG++
Sbjct: 596 RSVSIKGSR 622
Score = 64.3 bits (134), Expect(2) = 3e-027
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
R W PM R+WG W + LTG+SL+F+V + D T + P W FG+T+ K F
Sbjct: 620 RTGWMPMSRNWGVNWQSNALLTGQSLSFQVTSTDGHTLTFPNAAPAGWGFGQTFATNKQF 799
>gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 5', mRNA sequence
Length = 516
Score = 72.5 bits (152), Expect(2) = 9e-027
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -1 / +1
Query: 544 IAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
I +AGIV + YR+V C KGG+R+TI G+ +++ V VTNV GAGDV ++ +KG+
Sbjct: 19 IGIYRAGIVAVAYRRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVAIKGS 186
Score = 68.4 bits (143), Expect(2) = 9e-027
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + DL G+SL+FRV +D R TS + P W FG+T++ +
Sbjct: 196 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQ 360
>gb|BF201369.1|BF201369 WHE0990_H02_P04ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 386
Score = 73.5 bits (154), Expect(2) = 3e-026
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = -1 / +2
Query: 556 AFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
A+L+I +AGIV + YR+V C KGGIR+TI G+ +++ V VTNV GA +V ++ +KG+
Sbjct: 47 AYLQIGIYRAGIVAVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGACEVQSVAIKGS 226
Score = 65.7 bits (137), Expect(2) = 3e-026
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKT 215
W M R+WGQ W + DL G+SL+FRV +D R TS + P W FG+T
Sbjct: 236 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQT 385
>gb|DR738339.1|DR738339 FGAS083556 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1169
Score = 85.8 bits (181), Expect(2) = 4e-026
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV
Sbjct: 562 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVR 741
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 742 SVKIKGTE 765
Score = 52.8 bits (109), Expect(2) = 4e-026
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 218
W M WGQ+W +DLTG+ ++F + ++ T+++V P+D FGK
Sbjct: 772 WLDMGPHWGQIWHINLDLTGQPVSFELTSS*RTTMTNFNVVPKDGDFGK 918
>gb|BJ282446.1|BJ282446 BJ282446 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr10k10 3', mRNA sequence
Length = 617
Score = 73.0 bits (153), Expect(2) = 4e-026
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / -3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 456 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 304
Score = 65.7 bits (137), Expect(2) = 4e-026
Identities = 22/51 (43%), Positives = 38/51 (74%)
Frame = -1 / -3
Query: 526 GIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
G++PI YR+V C +GG+R++++G + V ++NVGGAGDV ++ +KG +
Sbjct: 615 GVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVRSVKIKGTE 463
>gb|BJ238210.1|BJ238210 BJ238210 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe1a02 3', mRNA sequence
Length = 596
Score = 73.0 bits (153), Expect(2) = 3e-025
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W +DLTG+ ++F + ++D T+++V P+DW+FGKTY
Sbjct: 439 WLDMGRNWGQIWHINLDLTGQPVSFELTSSDGTTMTNFNVVPKDWEFGKTY 287
Score = 62.9 bits (131), Expect(2) = 3e-025
Identities = 21/50 (42%), Positives = 37/50 (74%)
Frame = -1 / -2
Query: 523 IVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
++PI YR+V C +GG+R++++G + V ++NVGGAGDV ++ +KG +
Sbjct: 595 VMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVRSVKIKGTE 446
>gb|CD894504.1|CD894504 G118.126G10F010823 G118 Triticum aestivum cDNA clone G118126G10,
mRNA sequence
Length = 682
Score = 91.8 bits (194), Expect(2) = 1e-024
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL IA +AGIVP++YR+V C KGGIR+TI G+ +++ V VTNVGGAGD
Sbjct: 357 HFDMAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVGGAGDAQ 536
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 537 SVSIKGTR 560
Score = 41.8 bits (85), Expect(2) = 1e-024
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHR 266
R W M R+WG W + L G+ L+FRV ++D R
Sbjct: 558 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGR 665
>gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDNA clone F07_n129_plate_3, mRNA
sequence
Length = 611
Score = 84.0 bits (177), Expect(2) = 1e-024
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + F +IA +AGIVP++YR+VAC KGGIR+TI G+ +++ V VTNV G GD+
Sbjct: 188 HFDMSQPVFQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVCGPGDMH 367
Query: 397 ALWVKGNK 374
A+ VK ++
Sbjct: 368 AVSVKSSR 391
Score = 49.6 bits (102), Expect(2) = 1e-024
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1 / +2
Query: 355 MKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
+ R+WGQ W + L G+ L+FRV + S + PR W FG+T+ +
Sbjct: 407 LSRNWGQNWQSNALLDGQGLSFRVTAGYGQSVISNNAFPRGWSFGQTFSGAQ 562
>gb|CK205372.1|CK205372 FGAS016850 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1042
Score = 70.7 bits (148), Expect(2) = 5e-024
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = -1 / -2
Query: 583 GEHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGD 404
G F FL+IA +AG++P++Y++V KGGIR+TI + +++ V VTNV GAGD
Sbjct: 864 GPIFKWSSRPFLQIAQYRAGMLPVSYKRVP*VKKGGIRFTINDHSYFNVVLVTNVAGAGD 685
Query: 403 VVALWVKGNK 374
++ +KG +
Sbjct: 684 ARSVSIKGTR 655
Score = 61.1 bits (127), Expect(2) = 5e-024
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -1 / -2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W M R+WG W + L G+ L+FRV ++D R TS P W FG+T++ +
Sbjct: 657 RTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAE 484
>gb|AJ611080.1|AJ611080 AJ611080 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04276R, mRNA
sequence
Length = 452
Score = 89.0 bits (188), Expect(2) = 5e-024
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + F +IA +AGIVP++YR+VAC KGGIR+TI G+ +++ V VTNVGG GDV
Sbjct: 108 HFDMSQPVFQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVH 287
Query: 397 ALWVKGNK 374
A+ VK +
Sbjct: 288 AVSVKSTR 311
Score = 42.8 bits (87), Expect(2) = 5e-024
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPR 236
R W + R+WGQ W + L G+ L+FRV + + S + PR
Sbjct: 309 RSGWQSLSRNWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPR 446
>gb|BE427226.1|BE427226 PSR6138 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6138, mRNA sequence
Length = 1193
Score = 89.0 bits (188), Expect(2) = 6e-024
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + F +IA +AGIVP++YR+VAC KGGIR+TI G+ +++ V VTNVGG GDV
Sbjct: 413 HFDMSQPVFQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVH 592
Query: 397 ALWVKGNK 374
A+ VK +
Sbjct: 593 AVSVKSTR 616
Score = 42.3 bits (86), Expect(2) = 6e-024
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1 / +3
Query: 355 MKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKT 215
+ R+WGQ W + L G+ L+FRV + + + P W G+T
Sbjct: 633 LSRNWGQNWQSNALLDGQGLSFRVTXGNGQSVVFNNAVPXGWSXGQT 773
>gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8m22 3', mRNA sequence
Length = 650
Score = 68.4 bits (143), Expect(2) = 7e-024
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + DL G+SL+FRV +D R TS + P W FG+T++ +
Sbjct: 508 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQ 344
Score = 62.9 bits (131), Expect(2) = 7e-024
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 508 YRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
YR+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ +KG+
Sbjct: 649 YRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVAIKGS 518
>gb|BJ270401.1|BJ270401 BJ270401 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh7i17 5', mRNA sequence
Length = 646
Score = 77.6 bits (163), Expect(2) = 2e-023
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W PM R+WGQ W + L G++L+FRV +D R +TSW+ P+ W+FG+T++
Sbjct: 131 WMPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNAAPQSWRFGQTFE 286
Score = 52.4 bits (108), Expect(2) = 2e-023
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = -1 / +2
Query: 496 ACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
AC GG+R+TI G ++++ V +TNV GAGD+V VKG+
Sbjct: 2 ACRKSGGVRFTINGFRYFNLVLITNVAGAGDLVRASVKGS 121
>gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 738
Score = 68.4 bits (143), Expect(2) = 6e-023
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -1 / -1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W M R+WGQ W + DL G+SL+FRV +D R TS + P W FG+T++ +
Sbjct: 600 WQAMARNWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQ 436
Score = 59.7 bits (124), Expect(2) = 6e-023
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = -1 / -1
Query: 505 RKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
R+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ +KG+
Sbjct: 738 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVAIKGS 610
>gb|AJ612348.1|AJ612348 AJ612348 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06593R, mRNA
sequence
Length = 787
Score = 85.8 bits (181), Expect(2) = 1e-022
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I AF KIA KAG++PI YR+V C +GG+R++++G + V ++NVGGAGDV
Sbjct: 467 HFLLPIQAFEKIALWKAGVMPIQYRRVKCLREGGVRFSVSGKSFFFTVLISNVGGAGDVR 646
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 647 SVKIKGTE 670
Score = 40.9 bits (83), Expect(2) = 1e-022
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHR 266
W M R+WGQ+W +DLTG+ +F + ++ R
Sbjct: 677 WLDMGRNWGQIWHINLDLTGQPXSFELTSSXGR 775
>gb|BQ839416.1|BQ839416 WHE4165_H03_P05ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_H03_P05, mRNA sequence
Length = 639
Score = 105 bits (225), Expect = 4e-022
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + F +IA +AGIVP++YR+VAC KGGIR+TI G+ +++ V VTNVGG GDV
Sbjct: 393 HFDMSQPVFQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVH 572
Query: 397 ALWVKGNKRVKWTPMKRSWGQ 335
A+ VK + W + R+WGQ
Sbjct: 573 AVSVKSTRSAAWQSLSRNWGQ 635
>gb|BQ295118.1|BQ295118 WHE2858_D11_H22ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2858_D11_H22, mRNA sequence
Length = 570
Score = 105 bits (224), Expect = 5e-022
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = -1 / +2
Query: 520 VPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSW 341
+P+ Y++V C KGG+R+ I G+ +++ V V NV G + ++ VK + W PM R+W
Sbjct: 11 IPVMYQRVPCVKKGGVRFKIAGHDYFNLVNVFNVAADGSIKSMDVKSSDSDTWAPMTRNW 190
Query: 340 GQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF* 191
G W + +LTG+ L+FR+ + D R ++ P W FG+T+ + F*
Sbjct: 191 GANWQSLANLTGKMLSFRLTSTDGRTLVFNNIVPAGWTFGQTFASKLQF* 340
>gb|BE427223.1|BE427223 PSR6135 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6135, mRNA sequence
Length = 1173
Score = 89.0 bits (188), Expect(2) = 2e-021
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + F +IA +AGIVP++YR+VAC KGGIR+TI G+ +++ V VTNVGG GDV
Sbjct: 404 HFDMSQPVFQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVH 583
Query: 397 ALWVKGNK 374
A+ VK +
Sbjct: 584 AVSVKSTR 607
Score = 34.1 bits (68), Expect(2) = 2e-021
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATS 254
R W + R+WGQ W + L G+ L RV + + S
Sbjct: 605 RSGWQSLSRNWGQNWQSNALLDGQGLFXRVTXGNGQSVVS 724
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 514,272,570
Number of Sequences: 636343
Number of extensions: 7956160
Number of successful extensions: 142226
Number of sequences better than 1.0e-020: 64
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 15786327652
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)