TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594211.2.1
(668 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE517610.1|BE517610 WHE0628_B01_D02ZA Wheat ABA-treated ... 110 1e-027
gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: L... 110 1e-026
gb|BJ319686.1|BJ319686 BJ319686 Y. Ogihara unpublished cDNA... 110 1e-026
gb|BJ259680.1|BJ259680 BJ259680 Y. Ogihara unpublished cDNA... 110 1e-026
gb|BJ265396.1|BJ265396 BJ265396 Y. Ogihara unpublished cDNA... 110 1e-026
gb|BJ256682.1|BJ256682 BJ256682 Y. Ogihara unpublished cDNA... 110 2e-026
gb|CA728402.1|CA728402 wdi1c.pk002.j9 wdi1c Triticum aestiv... 110 2e-026
gb|BE419472.1|BE419472 WWS012.E5R000101 ITEC WWS Wheat Scut... 110 2e-026
gb|BJ316647.1|BJ316647 BJ316647 Y. Ogihara unpublished cDNA... 110 2e-026
gb|CD892359.1|CD892359 G118.120L11F010725 G118 Triticum aes... 108 8e-026
gb|CD892360.1|CD892360 G118.120L11R010926 G118 Triticum aes... 104 1e-024
gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDN... 107 1e-022
gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis... 103 2e-021
gb|BQ169877.1|BQ169877 WHE0975_G03_M05ZT Wheat pre-anthesis... 103 2e-021
gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, compl... 103 2e-021
gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA... 102 5e-021
gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA... 102 5e-021
gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA... 102 5e-021
gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA... 102 5e-021
gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA... 102 5e-021
gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthe... 102 5e-021
gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA,... 102 5e-021
gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, comp... 101 6e-021
>gb|BE517610.1|BE517610 WHE0628_B01_D02ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0628_B01_D02, mRNA sequence
Length = 638
Score = 110 bits (234), Expect(2) = 1e-027
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SV+S+NA PRGW FGQTFSGAQF+* P+
Sbjct: 622 NWGQNWQSNALLDGQGLSFRVTAGNGQSVISNNAVPRGWSFGQTFSGAQFH*APA 458
Score = 97.3 bits (206), Expect(3) = 8e-023
Identities = 39/53 (73%), Positives = 40/53 (75%)
Frame = +2 / +3
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLE T+ P VTRKER CPS S LLCQF PQ
Sbjct: 462 GAQWNWAPLKVWPKDQPRGTALLEITDWPLPAVTRKERPCPSSSALLCQFCPQ 620
Score = 33.6 bits (67), Expect(2) = 1e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 394 LGACREAPWFYEW 356
+GAC EAPWFY W
Sbjct: 388 IGACWEAPWFYGW 350
Score = 25.4 bits (49), Expect(3) = 8e-023
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 354 HHS*NHGASRQAP 392
+H *NHGAS+ AP
Sbjct: 348 NHP*NHGASQHAP 386
Score = 22.6 bits (43), Expect(3) = 8e-023
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2 / +1
Query: 269 PTRLTPARQNPR*Y*A*TTGNSPDPKR 349
PT ++P *Y*A* + DP+R
Sbjct: 247 PTHANQTIKSP**Y*A*LPATTSDPQR 327
>gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1135
Score = 110 bits (234), Expect(2) = 1e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 679 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*PPA 515
Score = 101 bits (215), Expect(3) = 2e-022
Identities = 41/53 (77%), Positives = 42/53 (79%)
Frame = +2 / +3
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPSRS LLCQF PQ
Sbjct: 519 GGQWNWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSRSALLCQFCPQ 677
Score = 30.4 bits (60), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 394 LGACREAPWFYE 359
+GAC EAPWFY+
Sbjct: 445 IGACWEAPWFYD 410
Score = 23.5 bits (45), Expect(3) = 2e-022
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 411 S*NHGASQHAP 443
Score = 23.1 bits (44), Expect(3) = 2e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2 / +2
Query: 95 TTNTLG*HAKHLIRKRPSP*DPT 163
TT T H K R+RP P PT
Sbjct: 119 TTQTEEYHTKTSTRQRPPPKRPT 187
>gb|BJ319686.1|BJ319686 BJ319686 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf9l11 3', mRNA sequence
Length = 729
Score = 110 bits (234), Expect(2) = 1e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 605 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*PPA 441
Score = 101 bits (215), Expect(3) = 7e-023
Identities = 41/53 (77%), Positives = 42/53 (79%)
Frame = +2 / +1
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPSRS LLCQF PQ
Sbjct: 445 GGQWNWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSRSALLCQFCPQ 603
Score = 30.4 bits (60), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 394 LGACREAPWFYE 359
+GAC EAPWFY+
Sbjct: 371 IGACWEAPWFYD 336
Score = 23.5 bits (45), Expect(3) = 7e-023
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 337 S*NHGASQHAP 369
Score = 23.1 bits (44), Expect(3) = 7e-023
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2 / +3
Query: 95 TTNTLG*HAKHLIRKRPSP*DPT 163
TT T H K R+RP P PT
Sbjct: 45 TTQTEEYHTKTSTRQRPPPKRPT 113
>gb|BJ259680.1|BJ259680 BJ259680 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21m18 5', mRNA sequence
Length = 641
Score = 110 bits (234), Expect(2) = 1e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 58 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*PPA 222
Score = 101 bits (215), Expect(3) = 5e-023
Identities = 41/53 (77%), Positives = 42/53 (79%)
Frame = +2 / -1
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPSRS LLCQF PQ
Sbjct: 218 GGQWNWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSRSALLCQFCPQ 60
Score = 30.4 bits (60), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 394 LGACREAPWFYE 359
+GAC EAPWFY+
Sbjct: 292 IGACWEAPWFYD 327
Score = 23.5 bits (45), Expect(3) = 5e-023
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 326 S*NHGASQHAP 294
Score = 23.1 bits (44), Expect(3) = 5e-023
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2 / -3
Query: 95 TTNTLG*HAKHLIRKRPSP*DPT 163
TT T H K R+RP P PT
Sbjct: 618 TTQTEEYHTKTSTRQRPPPKRPT 550
>gb|BJ265396.1|BJ265396 BJ265396 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21m18 3', mRNA sequence
Length = 608
Score = 110 bits (234), Expect(2) = 1e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / -3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 597 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*PPA 433
Score = 101 bits (215), Expect(3) = 5e-023
Identities = 41/53 (77%), Positives = 42/53 (79%)
Frame = +2 / +2
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPSRS LLCQF PQ
Sbjct: 437 GGQWNWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSRSALLCQFCPQ 595
Score = 30.4 bits (60), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 394 LGACREAPWFYE 359
+GAC EAPWFY+
Sbjct: 363 IGACWEAPWFYD 328
Score = 23.5 bits (45), Expect(3) = 5e-023
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 329 S*NHGASQHAP 361
Score = 23.1 bits (44), Expect(3) = 5e-023
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2 / +1
Query: 95 TTNTLG*HAKHLIRKRPSP*DPT 163
TT T H K R+RP P PT
Sbjct: 37 TTQTEEYHTKTSTRQRPPPKRPT 105
>gb|BJ256682.1|BJ256682 BJ256682 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh17k05 5', mRNA sequence
Length = 590
Score = 110 bits (235), Expect(2) = 2e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 93 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*APA 257
Score = 99.1 bits (210), Expect(2) = 2e-021
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = +2 / -2
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPS S LLCQF PQ
Sbjct: 253 GAQ*NWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSSSALLCQFCPQ 95
Score = 29.5 bits (58), Expect(2) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 391 GACREAPWFYE 359
GAC EAPWFY+
Sbjct: 330 GACWEAPWFYD 362
Score = 23.5 bits (45), Expect(2) = 2e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 361 S*NHGASQHAP 329
>gb|CA728402.1|CA728402 wdi1c.pk002.j9 wdi1c Triticum aestivum cDNA clone wdi1c.pk002.j9 5'
end, mRNA sequence
Length = 549
Score = 110 bits (235), Expect(2) = 2e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 145 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*APA 309
Score = 99.1 bits (210), Expect(2) = 2e-021
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = +2 / -2
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPS S LLCQF PQ
Sbjct: 305 GAQ*NWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSSSALLCQFCPQ 147
Score = 29.5 bits (58), Expect(2) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 391 GACREAPWFYE 359
GAC EAPWFY+
Sbjct: 382 GACWEAPWFYD 414
Score = 23.5 bits (45), Expect(2) = 2e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 413 S*NHGASQHAP 381
>gb|BE419472.1|BE419472 WWS012.E5R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS012.E5, mRNA sequence
Length = 479
Score = 110 bits (235), Expect(2) = 2e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 88 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*APA 252
Score = 99.1 bits (210), Expect(2) = 2e-021
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPS S LLCQF PQ
Sbjct: 248 GAQ*NWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSSSALLCQFCPQ 90
Score = 29.5 bits (58), Expect(2) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 391 GACREAPWFYE 359
GAC EAPWFY+
Sbjct: 325 GACWEAPWFYD 357
Score = 23.5 bits (45), Expect(2) = 2e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 356 S*NHGASQHAP 324
>gb|BJ316647.1|BJ316647 BJ316647 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf24b19 5', mRNA sequence
Length = 400
Score = 110 bits (235), Expect(2) = 2e-026
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+
Sbjct: 95 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*APA 259
Score = 99.1 bits (210), Expect(2) = 2e-021
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = +2 / -2
Query: 488 GVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLLCQFWPQ 646
G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPS S LLCQF PQ
Sbjct: 255 GAQ*NWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSSSALLCQFCPQ 97
Score = 29.5 bits (58), Expect(2) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 391 GACREAPWFYE 359
GAC EAPWFY+
Sbjct: 332 GACWEAPWFYD 364
Score = 23.5 bits (45), Expect(2) = 2e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 363 S*NHGASQHAP 331
>gb|CD892359.1|CD892359 G118.120L11F010725 G118 Triticum aestivum cDNA clone G118120L11,
mRNA sequence
Length = 501
Score = 108 bits (230), Expect(2) = 8e-026
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPAA 469
+WGQNWQSN LLDGQ LSFRVT +G+SVVS+NA PRGW FGQTFSGAQF+* P+A
Sbjct: 173 NWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQFH*ERPHHPSA 352
Query: 468 SS 463
+
Sbjct: 353 EA 358
Score = 97.7 bits (207), Expect(2) = 6e-021
Identities = 42/66 (63%), Positives = 44/66 (66%)
Frame = +2 / -1
Query: 449 VDDGRDDAAGTMEGVQLNWAPLKVWPKPQPRGAALLETTERPSLVVTRKERACPSRSVLL 628
+ D A G Q NWAPLKVWPK QPRG ALLETT+ P VTRKER CPS S LL
Sbjct: 372 LQDSTASADG*CGRSQWNWAPLKVWPKDQPRGTALLETTDWPLPAVTRKERPCPSSSALL 193
Query: 629 CQFWPQ 646
CQF PQ
Sbjct: 192 CQFCPQ 175
Score = 29.5 bits (58), Expect(2) = 8e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 391 GACREAPWFYE 359
GAC EAPWFY+
Sbjct: 412 GACWEAPWFYD 444
Score = 23.5 bits (45), Expect(2) = 6e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 360 S*NHGASRQAP 392
S*NHGAS+ AP
Sbjct: 443 S*NHGASQHAP 411
>gb|CD892360.1|CD892360 G118.120L11R010926 G118 Triticum aestivum cDNA clone G118120L11,
mRNA sequence
Length = 697
Score = 104 bits (221), Expect(2) = 1e-024
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPAA 469
+WGQNWQSN LLDGQ LSFRVT + +SVVS+NA PRGW FGQTFSGAQF+* P+A
Sbjct: 615 NWGQNWQSNALLDGQGLSFRVTAGNVQSVVSNNAVPRGWSFGQTFSGAQFH*ERPHHPSA 436
Query: 468 SS 463
+
Sbjct: 435 EA 430
Score = 29.5 bits (58), Expect(2) = 1e-024
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 391 GACREAPWFYE 359
GAC EAPWFY+
Sbjct: 376 GACWEAPWFYD 344
>gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDNA clone F07_n129_plate_3, mRNA
sequence
Length = 611
Score = 107 bits (228), Expect = 1e-022
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN LLDGQ LSFRVT G+SV+S+NA PRGW FGQTFSGAQF+* P+
Sbjct: 416 NWGQNWQSNALLDGQGLSFRVTAGYGQSVISNNAFPRGWSFGQTFSGAQFH*APA 580
>gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0975_G03_M05, mRNA sequence
Length = 464
Score = 103 bits (219), Expect = 2e-021
Identities = 41/59 (69%), Positives = 46/59 (77%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPA 472
+WG NWQSNT LDGQ LSFRVT+SDGR+V S+ AAP GW FGQTF GAQF PS P+
Sbjct: 210 NWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQF*SAPSSSPS 386
>gb|BQ169877.1|BQ169877 WHE0975_G03_M05ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0975_G03_M05, mRNA sequence
Length = 634
Score = 103 bits (219), Expect = 2e-021
Identities = 41/59 (69%), Positives = 46/59 (77%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPA 472
+WG NWQSNT LDGQ LSFRVT+SDGR+V S+ AAP GW FGQTF GAQF PS P+
Sbjct: 609 NWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQF*SAPSSSPS 433
>gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, complete cds
Length = 1265
Score = 103 bits (219), Expect = 2e-021
Identities = 41/59 (69%), Positives = 46/59 (77%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPA 472
+WG NWQSNT LDGQ LSFRVT+SDGR+V S+ AAP GW FGQTF GAQF PS P+
Sbjct: 654 NWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQF*SAPSSSPS 830
>gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 5', mRNA sequence
Length = 599
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 129 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 278
>gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 3', mRNA sequence
Length = 611
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / -3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 483 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 334
>gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 5', mRNA sequence
Length = 516
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 214 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 363
>gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 3', mRNA sequence
Length = 658
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 531 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 382
>gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8m22 3', mRNA sequence
Length = 650
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 490 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 341
>gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 738
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 582 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 433
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds
Length = 1142
Score = 102 bits (217), Expect = 5e-021
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQF 499
+WGQNWQSN LDGQ+LSFRVT SDGR+V S+NAAP GW FGQTF GAQF
Sbjct: 654 NWGQNWQSNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGAQF 803
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds
Length = 1201
Score = 101 bits (216), Expect = 6e-021
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPA 472
+WG NWQSNT LDGQ LSFRVT+SDGR+V S+ AAP GW FGQTF GA+F PS P+
Sbjct: 655 NWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAEF*SAPSSSPS 831
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 626,833,460
Number of Sequences: 636343
Number of extensions: 10201499
Number of successful extensions: 132945
Number of sequences better than 1.0e-020: 29
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14988142546
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)