TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440806.2.1
(1136 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL810355.1|AL810355 AL810355 e:29 Triticum aestivum cDNA... 325 4e-088
gb|CD938589.1|CD938589 OV.110G14F010312 OV Triticum aestivu... 291 1e-077
gb|BJ208137.1|BJ208137 BJ208137 Y. Ogihara unpublished cDNA... 268 8e-071
gb|CD898293.1|CD898293 G174.108K23F010821 G174 Triticum aes... 261 1e-068
gb|AL812363.1|AL812363 AL812363 e:310 Triticum aestivum cDN... 257 2e-067
gb|BJ245701.1|BJ245701 BJ245701 Y. Ogihara unpublished cDNA... 253 3e-066
gb|CK161286.1|CK161286 FGAS013852 Triticum aestivum FGAS: L... 253 4e-066
gb|CV769371.1|CV769371 FGAS063762 Triticum aestivum FGAS: L... 231 2e-059
gb|BJ247566.1|BJ247566 BJ247566 Y. Ogihara unpublished cDNA... 230 2e-059
gb|CV769347.1|CV769347 FGAS063738 Triticum aestivum FGAS: L... 227 1e-058
gb|BQ903526.1|BQ903526 Ta03_15d09_R Ta03_AAFC_ECORC_Fusariu... 165 1e-039
gb|AL812716.1|AL812716 AL812716 e:310 Triticum aestivum cDN... 126 3e-035
gb|BJ267963.1|BJ267963 BJ267963 Y. Ogihara unpublished cDNA... 145 7e-034
gb|CA728781.1|CA728781 wdi1c.pk005.m2 wdi1c Triticum aestiv... 135 8e-031
gb|CA679978.1|CA679978 wlm4.pk0022.b3 wlm4 Triticum aestivu... 116 7e-025
gb|BF484839.1|BF484839 WHE2320_C04_F08ZS Wheat pre-anthesis... 80 9e-022
>gb|AL810355.1|AL810355 AL810355 e:29 Triticum aestivum cDNA clone D07_e29_plate_1, mRNA
sequence
Length = 688
Score = 325 bits (705), Expect = 4e-088
Identities = 135/188 (71%), Positives = 141/188 (75%)
Frame = +2 / -2
Query: 560 ARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISL 739
A R PWLMMVG RLPPMAY+ QCV*SLFTTWKKP RQRGIRCTSPLPKWL ATVTCI L
Sbjct: 684 AMNRFPWLMMVGSRLPPMAYICQCV*SLFTTWKKPKRQRGIRCTSPLPKWLNATVTCIIL 505
Query: 740 SLDAASLAPNSITWSCLVKWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPS 919
S + APNSITWSCLVKW L+TVMAVEP T S PSAQL MD WSI L+ ETPS
Sbjct: 504 SCSSVLXAPNSITWSCLVKWLLDTVMAVEPLTTSMRPSAQLDMDTWSIHTLLEERMETPS 325
Query: 920 PSLSPRTPQWCCESRIAPPPCAAASWTCRLWRITLRTFCSVICAPTMCTCAPRPSMVLSL 1099
PSL R P WC ESRI PP C W LW IT T CSVICAP MCTCAPRPS+VL L
Sbjct: 324 PSLRVRRP*WCLESRIMPPECGTEWWMWTLWMITCLTPCSVICAPVMCTCAPRPSIVLLL 145
Query: 1100 LTMSSWQS 1123
TMSSW+S
Sbjct: 144 FTMSSWES 121
Score = 317 bits (687), Expect = 1e-085
Identities = 129/190 (67%), Positives = 146/190 (76%)
Frame = -3 / +2
Query: 1128 VELCQELIVSSDKTIDGRGAQVHIVGAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQH 949
+ L QELIV+S+KTIDGRGAQVHI GAQ+TLQ VR+VI+HN+ IRDS+H
Sbjct: 116 IRLSQELIVNSNKTIDGRGAQVHITGAQMTLQGVRHVIIHNVHIHHSVPHSGGMIRDSKH 295
Query: 948 HWGVRXXXXXXXXXXXXXXDIWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVML 769
H+G R +WIDH+SMSSCADGL+D V GSTAITVSN HFT+HDHVML
Sbjct: 296 HYGRRTRSDGDGVSILSSSSVWIDHVSMSSCADGLIDVVSGSTAITVSNSHFTKHDHVML 475
Query: 768 FGASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPT 589
FGA + +DR MQVTVAFNHFGKGLVQRMPRCR GFF VVNNDYTHW MYAIGG+R+PT
Sbjct: 476 FGAXNTEEQDRMMQVTVAFNHFGKGLVQRMPRCRFGFFQVVNNDYTHWQMYAIGGNRDPT 655
Query: 588 IISQGNRFRA 559
IISQGNRF A
Sbjct: 656 IISQGNRFIA 685
Score = 85.8 bits (181), Expect(2) = 4e-025
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +1 / -1
Query: 679 HPLHQPLAEVVEGDGDLHLPVLGRGVAGPEQHNVVVPREXXXXXXXXXXXXHRVHQPVRA 858
HPLHQPLAEVVE GDLH PVL VA EQH+VV+ E V + V A
Sbjct: 565 HPLHQPLAEVVERHGDLHHPVLLLRVASAEQHHVVMLGEVAVGHGDGGGAADHVDEAVGA 386
Query: 859 AAHGQVVDPDIAGPHHGD 912
A HG VVDP AG GD
Sbjct: 385 AGHGHVVDPHAAGGEDGD 332
Score = 50.6 bits (104), Expect(2) = 4e-025
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1 / -1
Query: 1033 LQRDLRAHDVHLRSAPVDGLVAAHDELLAE 1122
LQR L DVHLR+APVD LVA HDELL E
Sbjct: 211 LQRHLCPRDVHLRAAPVDRLVAVHDELLGE 122
>gb|CD938589.1|CD938589 OV.110G14F010312 OV Triticum aestivum cDNA clone OV110G14, mRNA
sequence
Length = 708
Score = 291 bits (629), Expect = 1e-077
Identities = 122/235 (51%), Positives = 149/235 (63%)
Frame = -3 / +2
Query: 1050 AQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDHL 871
A IT+Q V NVI+H L +R S H+G R +W+DH
Sbjct: 2 ACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHVWVDHC 181
Query: 870 SMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKGL 691
+S+CADGLVDA+ GSTAITVSN +FT H+ VML G SD+ KD+ MQVT+AFNHFG+GL
Sbjct: 182 WVSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGL 361
Query: 690 VQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQ 511
+QRMPRCRHG+FHVVNNDYTHW MYAIGGS PTI SQGNR+ A + KEVTKR T
Sbjct: 362 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETA 541
Query: 510 YSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAG 346
+ +K W W+S+ D+ LNGAFF SG Y R + AK ++T AG
Sbjct: 542 QTTWKAWNWRSEGDMLLNGAFFTPSGAGASASYSRAXSLGAKSSXMVATITSGAG 706
Score = 207 bits (447), Expect = 2e-052
Identities = 109/206 (52%), Positives = 121/206 (58%)
Frame = +2 / -1
Query: 434 PDWLKKAPLRNRSSCDFHTQFLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPM 613
PD +KKAP + S D Q + ++ V + VTSL AR R PWL+MVG LPPM
Sbjct: 618 PDGVKKAPFSSMSPSDLQFQAFHVVWAVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPM 439
Query: 614 AYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLV 793
AY+SQ V*SLFTTWK P GI SP PKWLKA VTCI+LSL SL P SIT V
Sbjct: 438 AYISQWV*SLFTTWK*PCLHLGILWMSPSPKWLKAIVTCIALSLR*ESL*PRSITSLWWV 259
Query: 794 KWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPSLSPRTPQWCCESRIAP 973
K LETVMAVEP AST PSAQL +WS Q L P ET SPS R P W E R
Sbjct: 258 K*LLETVMAVEPIMASTRPSAQLETQQWSTQTWLAPKMETASPSAMVRHP*WLGELRTMA 79
Query: 974 PPCAAASWTCRLWRITLRTFCSVICA 1051
P SW R W ITL T+ V+ A
Sbjct: 78 LPVGRQSWMWRPWMITLVTYWMVMHA 1
>gb|BJ208137.1|BJ208137 BJ208137 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6p12 5', mRNA sequence
Length = 585
Score = 268 bits (580), Expect = 8e-071
Identities = 106/178 (59%), Positives = 128/178 (71%)
Frame = -3 / +3
Query: 966 IRDSQHHWGVRXXXXXXXXXXXXXXDIWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTR 787
+R S H+G R +W+DH S+S+CADGLVDA+ GSTAITVSN +FT
Sbjct: 18 VRSSPSHYGWRTMADGDAVSIFGASHVWVDHCSLSNCADGLVDAIMGSTAITVSNNYFTH 197
Query: 786 HDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIG 607
H+ VML G SD+ KD+ MQVT+AFNHFG+GL+QRMPRCRHG+FHVVNNDYTHW MYAIG
Sbjct: 198 HNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIG 377
Query: 606 GSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSG 433
GS PTI SQGNR+ A + KEVTKR T + +K W W+S+ D+ LNGAFF SG
Sbjct: 378 GSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSEGDMLLNGAFFTPSG 551
Score = 189 bits (408), Expect = 4e-047
Identities = 99/182 (54%), Positives = 110/182 (60%)
Frame = +2 / -3
Query: 434 PDWLKKAPLRNRSSCDFHTQFLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPM 613
PD +KKAP + S D Q + ++ V + VTSL AR R PWL+MVG LPPM
Sbjct: 550 PDGVKKAPFSSMSPSDLQFQAFHVVWAVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPM 371
Query: 614 AYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLV 793
AY+SQ V*SLFTTWK P GI SP PKWLKA VTCI+LSL SL P SIT V
Sbjct: 370 AYISQWV*SLFTTWK*PCLHLGILWMSPSPKWLKAIVTCIALSLR*ESL*PRSITSLWWV 191
Query: 794 KWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPSLSPRTPQWCCESRIAP 973
K LETVMAVEP AST PSAQL ++WS Q L P ET SPS R P W E R
Sbjct: 190 K*LLETVMAVEPMMASTRPSAQLEREQWSTQTWLAPKMETASPSAMVRHP*WLGELRTMA 11
Query: 974 PP 979
P
Sbjct: 10 LP 5
>gb|CD898293.1|CD898293 G174.108K23F010821 G174 Triticum aestivum cDNA clone G174108K23,
mRNA sequence
Length = 734
Score = 261 bits (564), Expect = 1e-068
Identities = 107/181 (59%), Positives = 128/181 (70%)
Frame = -3 / +1
Query: 855 ADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMP 676
+DGLVDA+ GSTAITVSN +FT H+ VML G SD+ KD+ MQVT+AFNHFG+GL+QRMP
Sbjct: 7 SDGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMP 186
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYK 496
RCRHG+FHVVNNDYTHW MYAIGGS PTI SQGNR+ A + KEVTKR T + +K
Sbjct: 187 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWK 366
Query: 495 NWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC 316
W W+S+ D+ LNGAFF SG Y R + AK ++T AGAL+C G C
Sbjct: 367 AWNWRSEGDMLLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC 546
Query: 315 * 313
*
Sbjct: 547 * 549
Score = 149 bits (321), Expect = 4e-035
Identities = 79/140 (56%), Positives = 88/140 (62%)
Frame = +2 / -1
Query: 434 PDWLKKAPLRNRSSCDFHTQFLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPM 613
PD +KKAP + S D Q + V + VTSL AR R PWL+MVG LPPM
Sbjct: 428 PDGVKKAPFSSISPSDLQFQAFQVV*AVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPM 249
Query: 614 AYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLV 793
AY+SQ V*SLFTTWK P GI SP PKWLKA VTCI+LSL SL P+SIT V
Sbjct: 248 AYISQWV*SLFTTWK*PCLHLGILWMSPSPKWLKAMVTCIALSLR*ESL*PSSITSLWWV 69
Query: 794 KWPLETVMAVEPSTASTSPS 853
K L+TVMAVEP AST PS
Sbjct: 68 K*LLDTVMAVEPMMASTRPS 9
>gb|AL812363.1|AL812363 AL812363 e:310 Triticum aestivum cDNA clone A04_e310_plate_3, mRNA
sequence
Length = 529
Score = 257 bits (555), Expect = 2e-067
Identities = 101/171 (59%), Positives = 123/171 (71%)
Frame = -3 / +3
Query: 966 IRDSQHHWGVRXXXXXXXXXXXXXXDIWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTR 787
+R S H+G R +W+DH S+S+CADGLVDA+ GSTAITVSN +FT
Sbjct: 15 VRSSPSHYGWRTMADGDAVSIFGASHVWVDHCSLSNCADGLVDAIMGSTAITVSNNYFTH 194
Query: 786 HDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIG 607
H+ VML G SD+ KD+ MQVT+AFNHFG+GL+QRMPRCRHG+FHVVNNDYTHW MYAIG
Sbjct: 195 HNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIG 374
Query: 606 GSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNG 454
GS PTI SQGNR+ A + KEVTKR T + +K W W+S+ D+ LNG
Sbjct: 375 GSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSEGDMLLNG 527
Score = 180 bits (387), Expect = 3e-044
Identities = 95/176 (53%), Positives = 105/176 (59%)
Frame = +2 / -1
Query: 452 APLRNRSSCDFHTQFLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQC 631
AP + S D Q + ++ V + VTSL AR R PWL+MVG LPPMAY+SQ
Sbjct: 529 APFSSMSPSDLQFQAFHVVWAVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPMAYISQW 350
Query: 632 V*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLVKWPLET 811
V*SLFTTWK P GI SP PKWLKA VTCI+LSL SL P SIT VK LET
Sbjct: 349 V*SLFTTWK*PCLHLGILWMSPSPKWLKAMVTCIALSLR*ESLWPKSITSLWWVK*LLET 170
Query: 812 VMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPSLSPRTPQWCCESRIAPPP 979
VMAVEP AST PSAQL ++WS Q L P ET SPS R P W E R P
Sbjct: 169 VMAVEPMMASTRPSAQLEREQWSTQTWLAPKMETASPSAMVRHP*WLGELRTMALP 2
>gb|BJ245701.1|BJ245701 BJ245701 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1m10 5', mRNA sequence
Length = 614
Score = 253 bits (547), Expect = 3e-066
Identities = 101/155 (65%), Positives = 120/155 (77%)
Frame = -3 / +2
Query: 777 VMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSR 598
VMLFG+SD+ KD MQ+TVAFNHFG+GLVQRMPRCR GFFHVVNNDYTHWLMYAIGGS+
Sbjct: 8 VMLFGSSDSNPKDEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSK 187
Query: 597 NPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNER 418
NPTIISQGNR+ A + K +TKR Y + +E+KNWVW S+ DL LN A F SGG N+R
Sbjct: 188 NPTIISQGNRYIAPPNLAAKLITKRLYAEEAEWKNWVWHSEGDLMLNDAVFTDSGGPNQR 367
Query: 417 KYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC* 313
K+++ DLI K G Y LTR+AG L C+ G+ C*
Sbjct: 368 KFEKDDLIPPKPGSYVTRLTRFAGCLPCKPGKPC* 472
Score = 165 bits (354), Expect = 1e-039
Identities = 83/152 (54%), Positives = 88/152 (57%)
Frame = +2 / -3
Query: 323 LPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQFLY 502
LP PA VS Y P L MRSS S PP +K A L RS + HTQF +
Sbjct: 462 LPGLHGKQPAKRVSLVTYDPGLGGMRSSFSNFLWLGPPLSVKTASLSIRSPSECHTQFFH 283
Query: 503 SLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGI 682
S YSR V S A R PWLMMVGF LPPMAYMSQ V*SLFTTWK P R GI
Sbjct: 282 SASSAYSRFVISFAARFGGAM*RFPWLMMVGFLLPPMAYMSQWV*SLFTTWKNPHRHLGI 103
Query: 683 RCTSPLPKWLKATVTCISLSLDAASLAPNSIT 778
CT PLPKWLKATV C+ SL SL P S+T
Sbjct: 102 LCTRPLPKWLKATVICMISSLGLLSLEPKSMT 7
>gb|CK161286.1|CK161286 FGAS013852 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 899
Score = 253 bits (546), Expect = 4e-066
Identities = 100/158 (63%), Positives = 121/158 (76%)
Frame = -3 / +3
Query: 786 HDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIG 607
H+ VMLFGA+D +D+ MQVTVAFNHFG+GLVQRMPRCR+GFFHVVNNDYT+WLMYAIG
Sbjct: 69 HNDVMLFGATDGKEEDKVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTNWLMYAIG 248
Query: 606 GSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQ 427
GS PTI+SQGNR+RA + KE TKREY SE+KNWVW S+ DL +N AFF SGG+
Sbjct: 249 GSSAPTIVSQGNRYRAPPNMAAKEATKREYAAESEWKNWVWTSEGDLMINDAFFITSGGK 428
Query: 426 NERKYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC* 313
+K + DL++ K G+Y LTR+AG L+C G C*
Sbjct: 429 ISQKLNGKDLLKPKPGEYVRRLTRFAGPLDCNAGSPC* 542
Score = 184 bits (396), Expect(2) = 4e-046
Identities = 89/152 (58%), Positives = 96/152 (63%)
Frame = +2 / -2
Query: 323 LPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQFLY 502
LP Q + PA VS Y P L RS +PPD +KKA RS D HTQF +
Sbjct: 532 LPALQSNGPAKRVSLLTYSPGLGLRRSLPLSFWLIFPPDVMKKASFIIRSPSDVHTQFFH 353
Query: 503 SLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGI 682
S YSRLV SL + A R PWL MVG LPPMAYMSQ V*SL TTWKKP*RQRGI
Sbjct: 352 SDSAAYSRLVASLAAMLGGALYRFPWLTMVGALLPPMAYMSQLV*SLLTTWKKP*RQRGI 173
Query: 683 RCTSPLPKWLKATVTCISLSLDAASLAPNSIT 778
CT PLPKWLKATVTCI+LS S+AP SIT
Sbjct: 172 LCTRPLPKWLKATVTCITLSSSFPSVAPKSIT 77
Score = 22.6 bits (43), Expect(2) = 4e-046
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2 / -3
Query: 797 WPLETVMAVEPSTASTSP 850
W LETV AV +T S P
Sbjct: 57 WVLETVTAVXMATTSD*P 4
>gb|CV769371.1|CV769371 FGAS063762 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 231 bits (498), Expect = 2e-059
Identities = 92/144 (63%), Positives = 111/144 (77%)
Frame = -3 / +1
Query: 744 KDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRF 565
+D+ MQVTVAFNHFG+GLVQRMPRCR+GFFHVVNNDYT+WLMYAIGGS PTI+SQGNR+
Sbjct: 115 EDKVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTILSQGNRY 294
Query: 564 RAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAK 385
RA + KE TKREY SE+KNWVW S+ DL +N A+F SGG+ +K + DLI+ K
Sbjct: 295 RAPPNMAAKEATKREYAAESEWKNWVWVSEGDLMVNDAYFTTSGGKIGQKLNGKDLIKPK 474
Query: 384 GGQYAESLTRYAGALNCRVGRKC* 313
G+Y LTR+AG L+C G C*
Sbjct: 475 QGEYVRRLTRFAGPLDCNQGSPC* 546
Score = 170 bits (365), Expect = 3e-041
Identities = 83/140 (59%), Positives = 89/140 (63%)
Frame = +2 / -2
Query: 323 LPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQFLY 502
LP Q + PA VS Y P L MRS +PPD +K A RS D HTQF +
Sbjct: 536 LPWLQSNGPAKRVSLLTYSPCLGLMRSLPLSFWPIFPPDVVK*ASFTIRSPSDTHTQFFH 357
Query: 503 SLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGI 682
S YSRLV SL + A R PWL MVG LPPMAYMSQ V*SL TTWKKP*RQRGI
Sbjct: 356 SDSAAYSRLVASLAAMLGGAL*RFPWLRMVGALLPPMAYMSQLV*SLLTTWKKP*RQRGI 177
Query: 683 RCTSPLPKWLKATVTCISLS 742
CT PLPKWLKATVTCI+LS
Sbjct: 176 LCTRPLPKWLKATVTCITLS 117
>gb|BJ247566.1|BJ247566 BJ247566 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2m10 5', mRNA sequence
Length = 453
Score = 230 bits (497), Expect = 2e-059
Identities = 92/147 (62%), Positives = 109/147 (74%)
Frame = -3 / +2
Query: 753 AASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQG 574
A + MQ+TVAFNHFG+GLVQRMPRCR GFFHVVNNDYTHWLMYAIGGS+NPTI SQG
Sbjct: 8 ATPRHEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIXSQG 187
Query: 573 NRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLI 394
NR+ A + K +TKR Y + +E+KNWVW S+ DL LN A F SGG N+RK+++ DLI
Sbjct: 188 NRYIAPPNLAAKLITKRLYAEEAEWKNWVWHSEGDLMLNDAVFTDSGGPNQRKFEKDDLI 367
Query: 393 QAKGGQYAESLTRYAGALNCRVGRKC* 313
K G Y LTR AG L C+ G+ C*
Sbjct: 368 PPKPGSYVTRLTRXAGCLPCKPGKPC* 448
Score = 155 bits (334), Expect = 7e-037
Identities = 78/144 (54%), Positives = 82/144 (56%)
Frame = +2 / -1
Query: 323 LPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQFLY 502
LP PA VS Y P L MRSS S PP +K A L RS + HTQF +
Sbjct: 438 LPGLHGKQPAKRVSLVTYDPGLGGMRSSFSNFLWLGPPLSVKTASLSIRSPSECHTQFFH 259
Query: 503 SLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGI 682
S YSR V S A R PWLMMVGF LPPMAYMSQ V*SLFTTWK P R GI
Sbjct: 258 SASSAYSRFVISFAARFGGAMXRFPWLMMVGFLLPPMAYMSQWV*SLFTTWKNPHRHLGI 79
Query: 683 RCTSPLPKWLKATVTCISLSLDAA 754
CT PLPKWLKATV C+ L A
Sbjct: 78 LCTRPLPKWLKATVICMISCLGVA 7
>gb|CV769347.1|CV769347 FGAS063738 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 864
Score = 227 bits (491), Expect = 1e-058
Identities = 91/144 (63%), Positives = 110/144 (76%)
Frame = -3 / +3
Query: 744 KDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRF 565
+D+ MQVTVAFNHFG+GLVQRMPRCR+GFFHVVNNDYT+WLMYAIGGS PTI+SQGNR+
Sbjct: 117 EDKVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTILSQGNRY 296
Query: 564 RAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAK 385
RA + KE TKREY SE+KNWVW S+ DL +N A+F SGG+ +K + DLI+ K
Sbjct: 297 RAPPNMAAKEATKREYAAESEWKNWVWVSEGDLMVNDAYFTTSGGKIGQKLNGKDLIKPK 476
Query: 384 GGQYAESLTRYAGALNCRVGRKC* 313
G+Y LTR+AG L+C C*
Sbjct: 477 QGEYVRRLTRFAGPLDCNQXSPC* 548
Score = 166 bits (358), Expect = 3e-040
Identities = 81/136 (59%), Positives = 87/136 (63%)
Frame = +2 / -3
Query: 335 QLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQFLYSLYC 514
Q + PA VS Y P L MRS +PPD +K A RS D HTQF +S
Sbjct: 526 QSNGPAKRVSLLTYSPCLGLMRSLPLSFWPIFPPDVVK*ASFTIRSPSDTHTQFFHSDSA 347
Query: 515 VYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGIRCTS 694
YSRLV SL + A R PWL MVG LPPMAYMSQ V*SL TTWKKP*RQRGI CT
Sbjct: 346 AYSRLVASLAAMLGGAL*RFPWLRMVGALLPPMAYMSQLV*SLLTTWKKP*RQRGILCTR 167
Query: 695 PLPKWLKATVTCISLS 742
PLPKWLKATVTCI+LS
Sbjct: 166 PLPKWLKATVTCITLS 119
>gb|BQ903526.1|BQ903526 Ta03_15d09_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_15d09, mRNA
sequence
Length = 367
Score = 165 bits (354), Expect = 1e-039
Identities = 62/90 (68%), Positives = 73/90 (81%)
Frame = -3 / -1
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+W+DHLSM +C DG++D V STA+TVSN H H+ VMLFGASD +D+ MQVTVAFN
Sbjct: 271 VWVDHLSMDNCEDGMIDVVAMSTAVTVSNTHLAHHNDVMLFGASDHKPEDKVMQVTVAFN 92
Query: 708 HFGKGLVQRMPRCRHGFFHVVNNDYTHWLM 619
HFG+GLVQRMP CR+GFFHVVNN YT WLM
Sbjct: 91 HFGRGLVQRMPXCRYGFFHVVNNXYTBWLM 2
Score = 139 bits (299), Expect = 4e-032
Identities = 64/102 (62%), Positives = 71/102 (69%)
Frame = +2 / +3
Query: 620 MSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLVKW 799
MSQ V* L TTWKKP*RQ GI CT PLPKWLKATVTCI+LS SLAP SIT +W
Sbjct: 3 MSQXV*XLLTTWKKP*RQXGILCTRPLPKWLKATVTCITLSSGLWSLAPKSITSLWWARW 182
Query: 800 PLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPS 925
LETV AV+ +T S PS+QL M+RWS + ETPSPS
Sbjct: 183 VLETVTAVDMATTSIMPSSQLSMERWSTHTLVALKMETPSPS 308
>gb|AL812716.1|AL812716 AL812716 e:310 Triticum aestivum cDNA clone H11_e310_plate_7, mRNA
sequence
Length = 540
Score = 126 bits (270), Expect(2) = 3e-035
Identities = 46/63 (73%), Positives = 55/63 (87%)
Frame = -3 / +3
Query: 747 SKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNR 568
S+ R++QVT+ FNHFG+GL+QRMPRCR G+FHV+NNDYTHW MYAIGGS PTI SQGNR
Sbjct: 240 SRTRQLQVTIPFNHFGEGLIQRMPRCRRGYFHVLNNDYTHWEMYAIGGSAEPTINSQGNR 419
Query: 567 FRA 559
+ A
Sbjct: 420 YLA 428
Score = 90.4 bits (191), Expect(3) = 6e-031
Identities = 40/63 (63%), Positives = 44/63 (69%)
Frame = +2 / -3
Query: 560 ARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISL 739
AR R PWL+MVG LPPMAY+SQ V*SLF+TWK P GI SP PKWLK VTC L
Sbjct: 427 AR*RFPWLLMVGSALPPMAYISQWV*SLFSTWK*PRLHLGILWMSPSPKWLKGMVTCNCL 248
Query: 740 SLD 748
L+
Sbjct: 247 VLE 239
Score = 88.1 bits (186), Expect(2) = 8e-021
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = -3 / +2
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+W+DH S+S+CADGLVDA+ GSTAITVSN +FT H+ VML G SD+ KD+ + F
Sbjct: 98 VWVDHCSLSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDKAIAGHHTFQ 277
Query: 708 HF 703
F
Sbjct: 278 PF 283
Score = 59.3 bits (123), Expect(3) = 6e-031
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = +2 / -1
Query: 731 ISLSLDAASLAPNSITWSCLVKWPLETVMAVEPSTASTSPSAQLLMDRWSIQ 886
I+LSL SL P SIT VK LETVMAVEP AST PSAQL ++WS Q
Sbjct: 255 IALSLR*ESLWPKSITSLWWVK*LLETVMAVEPMMASTRPSAQLEREQWSTQ 100
Score = 43.7 bits (89), Expect(2) = 3e-035
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 540 KEVTKREYTQYSEYKNWVWKSQDDLFLNGAF 448
KEVTKR + + +K W W+S+ D+ LNGAF
Sbjct: 448 KEVTKRVESAQTTWKAWNWRSEGDMLLNGAF 540
Score = 33.6 bits (67), Expect(2) = 8e-021
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / +2
Query: 730 AGHRRLQPLRQGAGAADAALPSRLLPRGEQ 641
AGH QP R A DA + + LLPR EQ
Sbjct: 257 AGHHTFQPFRGRAHPEDAQVQAWLLPRAEQ 346
Score = 24.0 bits (46), Expect(3) = 6e-031
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2 / -2
Query: 449 KAPLRNRSSCDFHTQFLYSLYCVYSRLVTSL 541
KAPL + S D Q + ++ + + VTSL
Sbjct: 539 KAPLSSMSPSDLQFQAFHVVWALSTLFVTSL 447
>gb|BJ267963.1|BJ267963 BJ267963 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh14e12 5', mRNA sequence
Length = 654
Score = 145 bits (312), Expect = 7e-034
Identities = 61/117 (52%), Positives = 73/117 (62%)
Frame = -3 / +1
Query: 663 GFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVW 484
G+FHVVNNDYTHW MYAIGGS PTI SQGNR+ A + KEVTKR T + +K W W
Sbjct: 25 GYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNW 204
Query: 483 KSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC* 313
+S+ D+ LNGAFF SG Y R + AK ++T AGAL+C G C*
Sbjct: 205 RSEGDMLLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC* 375
>gb|CA728781.1|CA728781 wdi1c.pk005.m2 wdi1c Triticum aestivum cDNA clone wdi1c.pk005.m2 5'
end, mRNA sequence
Length = 589
Score = 135 bits (290), Expect = 8e-031
Identities = 54/90 (60%), Positives = 62/90 (68%)
Frame = -3 / +2
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYK 496
RCRHG+FHVVNNDYTHW MYAIGGS PTI SQGNR+ A + KEVTKR T + +K
Sbjct: 11 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWK 190
Query: 495 NWVWKSQDDLFLNGAFFNQSGGQNERKYDR 406
W W+S+ D+ LNGAFF SG Y R
Sbjct: 191 AWNWRSEGDMLLNGAFFTPSGAGASASYSR 280
>gb|CA679978.1|CA679978 wlm4.pk0022.b3 wlm4 Triticum aestivum cDNA clone wlm4.pk0022.b3 5'
end, mRNA sequence
Length = 602
Score = 116 bits (247), Expect = 7e-025
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = -3 / +1
Query: 585 ISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDR 406
+SQGNR+RA + KEVTKR+Y SE+KNWVW S DL +N A+F SGGQ +K +
Sbjct: 1 LSQGNRYRAPPNMAAKEVTKRDYAPESEWKNWVWISDGDLMINDAYFTTSGGQIGQKLNG 180
Query: 405 LDLIQAKGGQYAESLTRYAGALNCRVGRKC* 313
DLI+ K G+Y LTR+AG L+C G C*
Sbjct: 181 KDLIKPKPGEYVRRLTRFAGPLDCNPGSPC* 273
>gb|BF484839.1|BF484839 WHE2320_C04_F08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_C04_F08, mRNA sequence
Length = 368
Score = 80.3 bits (169), Expect(2) = 9e-022
Identities = 33/95 (34%), Positives = 48/95 (50%)
Frame = -3 / +1
Query: 1053 GAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDH 874
G +T+Q+ NVI++NL + + H +R +W+DH
Sbjct: 82 GGGLTIQHQNNVIINNLHVHGIVHTSGGNVSMTATHSTIRTRADGDGVSIFNATKVWVDH 261
Query: 873 LSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVML 769
LSM +C DG++D V STA+TVSN H H+ VML
Sbjct: 262 LSMDNCEDGMIDVVAMSTAVTVSNTHLAHHNDVML 366
Score = 44.6 bits (91), Expect(2) = 9e-022
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3 / +1
Query: 1128 VELCQELIVSSDKTIDGRGAQVHI 1057
+ QE+I+ SDKTIDGRGAQVH+
Sbjct: 4 INASQEIIIQSDKTIDGRGAQVHV 75
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 898,422,898
Number of Sequences: 636343
Number of extensions: 14880268
Number of successful extensions: 185891
Number of sequences better than 1.0e-020: 26
length of database: 122,413,413
effective HSP length: 54
effective length of database: 88,050,891
effective search space used: 28528488684
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)