TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419137.2.1
(989 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA625136.1|CA625136 wl1n.pk0123.e8 wl1n Triticum aestivu... 133 4e-039
gb|CA624291.1|CA624291 wl1n.pk0116.h1 wl1n Triticum aestivu... 123 2e-030
gb|BQ805842.1|BQ805842 WHE3571_F03_K05ZS Wheat developing g... 111 2e-027
gb|BJ319653.1|BJ319653 BJ319653 Y. Ogihara unpublished cDNA... 111 2e-027
gb|BJ314183.1|BJ314183 BJ314183 Y. Ogihara unpublished cDNA... 111 2e-027
gb|BQ838349.1|BQ838349 WHE2909_D11_G21ZS Wheat aluminum-str... 111 2e-027
gb|CD925097.1|CD925097 G750.115N08F010709 G750 Triticum aes... 111 2e-027
gb|BE420384.1|BE420384 WWS06.A6R000101 ITEC WWS Wheat Scute... 111 2e-027
gb|BG604528.1|BG604528 WHE0834_G04_M08ZS Wheat vernalized c... 111 2e-027
gb|CK199447.1|CK199447 FGAS007946 Triticum aestivum FGAS: L... 109 7e-027
gb|BJ240900.1|BJ240900 BJ240900 Y. Ogihara unpublished cDNA... 109 7e-027
gb|BJ227910.1|BJ227910 BJ227910 Y. Ogihara unpublished cDNA... 109 7e-027
gb|BM138379.1|BM138379 WHE0491_H06_O11ZS Wheat Fusarium gra... 109 7e-027
gb|BJ235684.1|BJ235684 BJ235684 Y. Ogihara unpublished cDNA... 109 7e-027
gb|BJ268940.1|BJ268940 BJ268940 Y. Ogihara unpublished cDNA... 109 7e-027
gb|CD896319.1|CD896319 G174.102H14F010823 G174 Triticum aes... 109 7e-027
gb|BJ287730.1|BJ287730 BJ287730 Y. Ogihara unpublished cDNA... 109 7e-027
gb|BJ222884.1|BJ222884 BJ222884 Y. Ogihara unpublished cDNA... 109 7e-027
gb|CA707586.1|CA707586 wdk2c.pk006.k17 wdk2c Triticum aesti... 109 7e-027
gb|BJ319155.1|BJ319155 BJ319155 Y. Ogihara unpublished cDNA... 109 7e-027
gb|CA710158.1|CA710158 wdk2c.pk017.l16 wdk2c Triticum aesti... 109 7e-027
gb|BG314521.1|BG314521 WHE2495_G12_M23ZS Triticum monococcu... 109 7e-027
gb|CK199769.1|CK199769 FGAS008276 Triticum aestivum FGAS: L... 109 1e-026
gb|BQ801841.1|BQ801841 WHE2819_B07_D13ZS Triticum monococcu... 80 3e-026
gb|BJ276921.1|BJ276921 BJ276921 Y. Ogihara unpublished cDNA... 79 4e-026
gb|BU100010.1|BU100010 WHE3314_B01_C02ZS Chinese Spring whe... 79 4e-026
gb|CD908459.1|CD908459 G468.109P05F010817 G468 Triticum aes... 79 4e-026
gb|CA719262.1|CA719262 wkm2n.pk003.o11 wkm2n Triticum aesti... 111 4e-026
gb|BQ161486.1|BQ161486 WHE1137_F09_K17ZT Wheat etiolated se... 79 4e-026
gb|BJ267302.1|BJ267302 BJ267302 Y. Ogihara unpublished cDNA... 111 4e-026
gb|CK167984.1|CK167984 FGAS052457 Triticum aestivum FGAS: T... 78 1e-025
gb|CK165124.1|CK165124 FGAS049065 Triticum aestivum FGAS: T... 78 1e-025
gb|CA719480.1|CA719480 wkm2n.pk005.d17 wkm2n Triticum aesti... 109 1e-025
gb|BE515993.1|BE515993 WHE0607_F01_L01ZA Wheat ABA-treated ... 104 2e-025
gb|CD912168.1|CD912168 G550.113I16F010522 G550 Triticum aes... 111 2e-025
gb|CK165760.1|CK165760 FGAS049753 Triticum aestivum FGAS: T... 77 2e-025
gb|CD888254.1|CD888254 G118.107I02R010924 G118 Triticum aes... 102 6e-025
gb|CA633796.1|CA633796 wle1n.pk0078.f2 wle1n Triticum aesti... 102 6e-025
gb|CD888253.1|CD888253 G118.107I02F010606 G118 Triticum aes... 112 7e-024
gb|CA652728.1|CA652728 wre1n.pk171.h12 wre1n Triticum aesti... 79 1e-023
gb|BE516004.1|BE516004 WHE0607_G04_N07ZA Wheat ABA-treated ... 97 3e-023
gb|CD891699.1|CD891699 G118.118C21F010724 G118 Triticum aes... 84 3e-023
gb|BE419645.1|BE419645 WWS015.G2R000101 ITEC WWS Wheat Scut... 110 3e-023
gb|BJ273849.1|BJ273849 BJ273849 Y. Ogihara unpublished cDNA... 59 6e-023
gb|CA700675.1|CA700675 wkm1c.pk006.h17 wkm1c Triticum aesti... 95 9e-023
gb|CK166649.1|CK166649 FGAS050819 Triticum aestivum FGAS: T... 78 2e-022
gb|BF200908.1|BF200908 WHE0821-0824_N16_N16ZS Wheat vernali... 107 2e-022
gb|AL819311.1|AL819311 AL819311 n:129 Triticum aestivum cDN... 94 2e-022
gb|CD890919.1|CD890919 G118.115L22F010719 G118 Triticum aes... 106 3e-022
gb|BJ313405.1|BJ313405 BJ313405 Y. Ogihara unpublished cDNA... 93 6e-022
gb|DR738511.1|DR738511 FGAS083728 Triticum aestivum FGAS: L... 90 4e-021
gb|BG607291.1|BG607291 WHE2493_G02_N03ZS Triticum monococcu... 90 5e-021
gb|BG314142.1|BG314142 WHE2459_F07_K13ZS Triticum monococcu... 90 5e-021
gb|AL817176.1|AL817176 AL817176 j:324 Triticum aestivum cDN... 90 5e-021
>gb|CA625136.1|CA625136 wl1n.pk0123.e8 wl1n Triticum aestivum cDNA clone wl1n.pk0123.e8 5'
end, mRNA sequence
Length = 419
Score = 133 bits (286), Expect(3) = 4e-039
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = +2 / +3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADL+AAV LCTVLRA
Sbjct: 27 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLEAAVCLCTVLRA 197
Score = 118 bits (253), Expect(3) = 1e-030
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = -3 / -2
Query: 240 VQRPTAAFRSASPWISVQHGVLGGVPRVALISPFSKLAHTPSFSASTGQRPLV 82
VQR TAA RSASPWISVQHGVLGGVPRVALISPFSKLAHTPSFSASTGQRPLV
Sbjct: 184 VQRHTAASRSASPWISVQHGVLGGVPRVALISPFSKLAHTPSFSASTGQRPLV 26
Score = 35.0 bits (70), Expect(3) = 4e-039
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1 / +1
Query: 433 YISMHAMHLVVHRMLLSLLCVF 498
YISMHAMHL+V ++ ++CVF
Sbjct: 313 YISMHAMHLLVPSHVVVVVCVF 378
Score = 33.1 bits (66), Expect(3) = 1e-030
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3 / -3
Query: 534 ***YL*QRQDHRKHTQQRQQHAMDDEMHCMHGYI 433
***YL Q+ ++T D+EMHCMHG I
Sbjct: 414 ***YLXXGQESWENTHNNNNM*WDEEMHCMHGNI 313
Score = 32.2 bits (64), Expect(3) = 4e-039
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQ 340
YCGRRVPSGFQ
Sbjct: 251 YCGRRVPSGFQ 283
Score = 22.6 bits (43), Expect(3) = 1e-030
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / -1
Query: 432 ILHHIYQRTY 403
ILHHIYQ +
Sbjct: 311 ILHHIYQEAF 282
>gb|CA624291.1|CA624291 wl1n.pk0116.h1 wl1n Triticum aestivum cDNA clone wl1n.pk0116.h1 5'
end, mRNA sequence
Length = 567
Score = 123 bits (263), Expect = 3e-027
Identities = 51/64 (79%), Positives = 56/64 (87%)
Frame = -2 / -2
Query: 772 PS*APKAFMGSLGSISWNSGRSDGSRSWLKPMLVSSVFTTSSNRILFPTGVKWSPSLNAD 593
P + + F GSLGSISWNSGRSDGSRSWLKPMLVSSVFTTSSNRILFPTGVKWSPSL++
Sbjct: 389 PKXSSEGFHGSLGSISWNSGRSDGSRSWLKPMLVSSVFTTSSNRILFPTGVKWSPSLHSI 210
Query: 592 VCQS 581
V +
Sbjct: 209 VAST 198
Score = 117 bits (250), Expect(2) = 2e-030
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = +3 / +1
Query: 591 TSALSDGLHFTPVGNKILFEEVVKTLETSIGFSQERLPSDLPLFHEIDPKDPMK 752
T SDGLHFTPVGNKILFEEVVKTLETSIGFSQERLPSDLPLFHE DPKDP K
Sbjct: 208 TMLCSDGLHFTPVGNKILFEEVVKTLETSIGFSQERLPSDLPLFHEXDPKDP*K 369
Score = 102 bits (217), Expect(2) = 4e-025
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -1 / -1
Query: 743 VLGVDLVEQREVRREPLLAETDARLQRLHHLLEQDLVSYRGEVEPVA 603
VLGV LVEQREVRREPLLAETDARLQRLHHLLEQDLVSY GEVEPVA
Sbjct: 360 VLGVXLVEQREVRREPLLAETDARLQRLHHLLEQDLVSYWGEVEPVA 220
Score = 36.8 bits (74), Expect(2) = 2e-030
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 735 PKDPMKAFGA*LGPWRRR 788
P+ PMKAFGA LGP+RRR
Sbjct: 351 PQGPMKAFGAXLGPYRRR 404
Score = 33.6 bits (67), Expect(2) = 4e-025
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 782 PPRPKLSSEGFHGVLG 735
P RPK SSEGFHG LG
Sbjct: 398 PIRPKXSSEGFHGSLG 351
>gb|BQ805842.1|BQ805842 WHE3571_F03_K05ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3571_F03_K05, mRNA sequence
Length = 738
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 398 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 559
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 614 YCGKNVPSGFQC 649
>gb|BJ319653.1|BJ319653 BJ319653 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf9j06 3', mRNA sequence
Length = 659
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / -3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 645 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 484
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 429 YCGKNVPSGFQC 394
>gb|BJ314183.1|BJ314183 BJ314183 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf9j06 5', mRNA sequence
Length = 646
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 36 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 197
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 252 YCGKNVPSGFQC 287
>gb|BQ838349.1|BQ838349 WHE2909_D11_G21ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2909_D11_G21, mRNA
sequence
Length = 644
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +1
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 82 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 243
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 298 YCGKNVPSGFQC 333
>gb|CD925097.1|CD925097 G750.115N08F010709 G750 Triticum aestivum cDNA clone G750115N08,
mRNA sequence
Length = 535
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 141 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 302
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 357 YCGKNVPSGFQC 392
>gb|BE420384.1|BE420384 WWS06.A6R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS06.A6, mRNA sequence
Length = 530
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 51 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 212
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 267 YCGKNVPSGFQC 302
>gb|BG604528.1|BG604528 WHE0834_G04_M08ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0834_G04_M08, mRNA sequence
Length = 499
Score = 111 bits (236), Expect(2) = 2e-027
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 14 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 175
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 230 YCGKNVPSGFQC 265
>gb|CK199447.1|CK199447 FGAS007946 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / -1
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 660 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 499
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 444 YCGKNVPSGFQC 409
>gb|BJ240900.1|BJ240900 BJ240900 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe17m18 3', mRNA sequence
Length = 676
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / -2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 663 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 502
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 447 YCGKNVPSGFQC 412
>gb|BJ227910.1|BJ227910 BJ227910 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl16l05 3', mRNA sequence
Length = 641
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / -2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 622 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 461
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 406 YCGKNVPSGFQC 371
>gb|BM138379.1|BM138379 WHE0491_H06_O11ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0491_H06_O11,
mRNA sequence
Length = 636
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 65 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 226
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 281 YCGKNVPSGFQC 316
>gb|BJ235684.1|BJ235684 BJ235684 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe17m18 5', mRNA sequence
Length = 630
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 42 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 203
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 258 YCGKNVPSGFQC 293
>gb|BJ268940.1|BJ268940 BJ268940 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh19g22 5', mRNA sequence
Length = 626
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 41 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 202
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 257 YCGKNVPSGFQC 292
>gb|CD896319.1|CD896319 G174.102H14F010823 G174 Triticum aestivum cDNA clone G174102H14,
mRNA sequence
Length = 609
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 24 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 185
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 240 YCGKNVPSGFQC 275
>gb|BJ287730.1|BJ287730 BJ287730 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl10j16 5', mRNA sequence
Length = 595
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 36 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 197
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 252 YCGKNVPSGFQC 287
>gb|BJ222884.1|BJ222884 BJ222884 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl16l05 5', mRNA sequence
Length = 570
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 71 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 232
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 287 YCGKNVPSGFQC 322
>gb|CA707586.1|CA707586 wdk2c.pk006.k17 wdk2c Triticum aestivum cDNA clone wdk2c.pk006.k17
5' end, mRNA sequence
Length = 521
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 36 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 197
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 252 YCGKNVPSGFQC 287
>gb|BJ319155.1|BJ319155 BJ319155 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5d10 3', mRNA sequence
Length = 498
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / -3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 478 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 317
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 262 YCGKNVPSGFQC 227
>gb|CA710158.1|CA710158 wdk2c.pk017.l16 wdk2c Triticum aestivum cDNA clone wdk2c.pk017.l16
5' end, mRNA sequence
Length = 440
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 36 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 197
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 252 YCGKNVPSGFQC 287
>gb|BG314521.1|BG314521 WHE2495_G12_M23ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2495_G12_M23,
mRNA sequence
Length = 381
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +1
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 64 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 225
Score = 32.7 bits (65), Expect(2) = 7e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 280 YCGKNVPSGFQC 315
>gb|CK199769.1|CK199769 FGAS008276 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 854
Score = 109 bits (232), Expect(2) = 1e-026
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +1
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 463 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 624
Score = 32.2 bits (64), Expect(2) = 1e-026
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 679 YCGQNVPSGFQC 714
>gb|BQ801841.1|BQ801841 WHE2819_B07_D13ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2819_B07_D13, mRNA
sequence
Length = 773
Score = 79.9 bits (168), Expect(2) = 3e-026
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +3 / +2
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
+Q+FPDWQTSALSDGLHFTP GNKILF+EV+KTLE+
Sbjct: 458 IQQFPDWQTSALSDGLHFTPFGNKILFDEVLKTLES 565
Score = 60.2 bits (125), Expect(2) = 3e-026
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / +2
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 563 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 646
>gb|BJ276921.1|BJ276921 BJ276921 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27c08 3', mRNA sequence
Length = 725
Score = 79.4 bits (167), Expect(2) = 4e-026
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +3 / -3
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
+Q+FPDWQTSALSDGLHFTP GNK+LF+EV+KTLE+
Sbjct: 384 IQQFPDWQTSALSDGLHFTPFGNKVLFDEVLKTLES 277
Score = 60.2 bits (125), Expect(2) = 4e-026
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / -3
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 279 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 196
>gb|BU100010.1|BU100010 WHE3314_B01_C02ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3314_B01_C02,
mRNA sequence
Length = 705
Score = 79.4 bits (167), Expect(2) = 4e-026
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +3 / -3
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
+Q+FPDWQTSALSDGLHFTP GNK+LF+EV+KTLE+
Sbjct: 424 IQQFPDWQTSALSDGLHFTPFGNKVLFDEVLKTLES 317
Score = 60.2 bits (125), Expect(2) = 4e-026
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / -3
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 319 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 236
>gb|CD908459.1|CD908459 G468.109P05F010817 G468 Triticum aestivum cDNA clone G468109P05,
mRNA sequence
Length = 536
Score = 79.4 bits (167), Expect(2) = 4e-026
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +3 / +1
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
+Q+FPDWQTSALSDGLHFTP GNK+LF+EV+KTLE+
Sbjct: 100 IQQFPDWQTSALSDGLHFTPFGNKVLFDEVLKTLES 207
Score = 60.2 bits (125), Expect(2) = 4e-026
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / +1
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 205 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 288
>gb|CA719262.1|CA719262 wkm2n.pk003.o11 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.o11
5' end, mRNA sequence
Length = 484
Score = 111 bits (236), Expect(2) = 4e-026
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 38 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 199
Score = 28.6 bits (56), Expect(2) = 4e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQ 340
YCG+ VPSGFQ
Sbjct: 255 YCGKNVPSGFQ 287
>gb|BQ161486.1|BQ161486 WHE1137_F09_K17ZT Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1137_F09_K17,
mRNA sequence
Length = 461
Score = 79.4 bits (167), Expect(2) = 4e-026
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +3 / -1
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
+Q+FPDWQTSALSDGLHFTP GNK+LF+EV+KTLE+
Sbjct: 368 IQQFPDWQTSALSDGLHFTPFGNKVLFDEVLKTLES 261
Score = 60.2 bits (125), Expect(2) = 4e-026
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / -1
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 263 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 180
>gb|BJ267302.1|BJ267302 BJ267302 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh10n10 5', mRNA sequence
Length = 417
Score = 111 bits (236), Expect(2) = 4e-026
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 47 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 208
Score = 28.6 bits (56), Expect(2) = 4e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQ 340
YCG+ VPSGFQ
Sbjct: 263 YCGKNVPSGFQ 295
>gb|CK167984.1|CK167984 FGAS052457 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1102
Score = 77.6 bits (163), Expect(2) = 1e-025
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / -3
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
MQ+ PDWQTSALSDGLHFTP GNKILF+EV+KTLE+
Sbjct: 485 MQQCPDWQTSALSDGLHFTPSGNKILFDEVLKTLES 378
Score = 60.2 bits (125), Expect(2) = 1e-025
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / -3
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 380 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 297
>gb|CK165124.1|CK165124 FGAS049065 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 879
Score = 77.6 bits (163), Expect(2) = 1e-025
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / -2
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
MQ+ PDWQTSALSDGLHFTP GNKILF+EV+KTLE+
Sbjct: 542 MQQCPDWQTSALSDGLHFTPSGNKILFDEVLKTLES 435
Score = 60.2 bits (125), Expect(2) = 1e-025
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / -2
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 437 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 354
>gb|CA719480.1|CA719480 wkm2n.pk005.d17 wkm2n Triticum aestivum cDNA clone wkm2n.pk005.d17
5' end, mRNA sequence
Length = 507
Score = 109 bits (232), Expect(2) = 1e-025
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 66 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 227
Score = 28.6 bits (56), Expect(2) = 1e-025
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQ 340
YCG+ VPSGFQ
Sbjct: 282 YCGKNVPSGFQ 314
>gb|BE515993.1|BE515993 WHE0607_F01_L01ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0607_F01_L01, mRNA sequence
Length = 668
Score = 104 bits (222), Expect(2) = 2e-025
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = +2 / -1
Query: 98 PVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 668 PIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 513
Score = 32.7 bits (65), Expect(2) = 2e-025
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 458 YCGKNVPSGFQC 423
>gb|CD912168.1|CD912168 G550.113I16F010522 G550 Triticum aestivum cDNA clone G550113I16,
mRNA sequence
Length = 574
Score = 111 bits (236), Expect(2) = 2e-025
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 299 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 460
Score = 26.3 bits (51), Expect(2) = 2e-025
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 308 YCGRRVPSGF 337
YCG+ VPSGF
Sbjct: 515 YCGKNVPSGF 544
>gb|CK165760.1|CK165760 FGAS049753 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1132
Score = 76.7 bits (161), Expect(2) = 2e-025
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +3 / -1
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
MQ+ PDWQTSALSDGLHFTP GNKILF EV+KTLE+
Sbjct: 484 MQQCPDWQTSALSDGLHFTPSGNKILFNEVLKTLES 377
Score = 60.2 bits (125), Expect(2) = 2e-025
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3 / -1
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDPKDP+KAF
Sbjct: 379 SVGFSQHSLRSDLPLFHEIDPKDPLKAF 296
>gb|CD888254.1|CD888254 G118.107I02R010924 G118 Triticum aestivum cDNA clone G118107I02,
mRNA sequence
Length = 629
Score = 102 bits (218), Expect(2) = 6e-025
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +2 / -2
Query: 98 PVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 628 PIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 473
Score = 32.7 bits (65), Expect(2) = 6e-025
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 418 YCGKNVPSGFQC 383
>gb|CA633796.1|CA633796 wle1n.pk0078.f2 wle1n Triticum aestivum cDNA clone wle1n.pk0078.f2
5' end, mRNA sequence
Length = 524
Score = 102 bits (218), Expect(2) = 6e-025
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +2 / +3
Query: 98 PVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 3 PIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 158
Score = 32.7 bits (65), Expect(2) = 6e-025
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 213 YCGKNVPSGFQC 248
>gb|CD888253.1|CD888253 G118.107I02F010606 G118 Triticum aestivum cDNA clone G118107I02,
mRNA sequence
Length = 525
Score = 112 bits (239), Expect = 7e-024
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +2 / +1
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADLKAAV LCT LRA
Sbjct: 289 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLKAAVCLCTALRA 450
>gb|CA652728.1|CA652728 wre1n.pk171.h12 wre1n Triticum aestivum cDNA clone wre1n.pk171.h12
5' end, mRNA sequence
Length = 530
Score = 79.4 bits (167), Expect(2) = 1e-023
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +3 / +1
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
+Q+FPDWQTSALSDGLHFTP GNK+LF+EV+KTLE+
Sbjct: 94 IQQFPDWQTSALSDGLHFTPFGNKVLFDEVLKTLES 201
Score = 51.5 bits (106), Expect(2) = 1e-023
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 687 SQERLPSDLPLFHEIDPKDPMKAF 758
SQ L SDLPLFHEIDPKDP+KAF
Sbjct: 212 SQHSLRSDLPLFHEIDPKDPLKAF 283
>gb|BE516004.1|BE516004 WHE0607_G04_N07ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0607_G04_N07, mRNA sequence
Length = 566
Score = 97.3 bits (206), Expect(2) = 3e-023
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +2 / -2
Query: 107 ALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
ALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 565 ALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 419
Score = 32.7 bits (65), Expect(2) = 3e-023
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 364 YCGKNVPSGFQC 329
>gb|CD891699.1|CD891699 G118.118C21F010724 G118 Triticum aestivum cDNA clone G118118C21,
mRNA sequence
Length = 563
Score = 83.5 bits (176), Expect(3) = 3e-023
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQG 205
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQG
Sbjct: 33 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQG 146
Score = 32.7 bits (65), Expect(3) = 3e-023
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 248 YCGKNVPSGFQC 283
Score = 31.3 bits (62), Expect(3) = 3e-023
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 203 GLADLKAAVGLCTVLRA 253
GLADL+AAV LCT L+A
Sbjct: 143 GLADLEAAVCLCTALKA 193
>gb|BE419645.1|BE419645 WWS015.G2R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS015.G2, mRNA sequence
Length = 232
Score = 110 bits (234), Expect = 3e-023
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL AAV LCT L+A
Sbjct: 63 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLXAAVCLCTALKA 224
>gb|BJ273849.1|BJ273849 BJ273849 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh19g22 3', mRNA sequence
Length = 617
Score = 59.3 bits (123), Expect(3) = 6e-023
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2 / -3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTP 172
RCP+D LKLGVCAN+LNGLIN LGTP
Sbjct: 606 RCPIDTLKLGVCANVLNGLINLQLGTP 526
Score = 54.2 bits (112), Expect(3) = 6e-023
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2 / -1
Query: 164 GTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
G P+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 533 GRRPKQPCCSLIQGLADLEAAVCLCTALKA 444
Score = 32.7 bits (65), Expect(3) = 6e-023
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 389 YCGKNVPSGFQC 354
>gb|CA700675.1|CA700675 wkm1c.pk006.h17 wkm1c Triticum aestivum cDNA clone wkm1c.pk006.h17
5' end, mRNA sequence
Length = 529
Score = 95.5 bits (202), Expect(2) = 9e-023
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2 / +1
Query: 110 LKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 1 LKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 144
Score = 32.7 bits (65), Expect(2) = 9e-023
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 199 YCGKNVPSGFQC 234
>gb|CK166649.1|CK166649 FGAS050819 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1135
Score = 77.6 bits (163), Expect(2) = 2e-022
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 567 MQEFPDWQTSALSDGLHFTPVGNKILFEEVVKTLET 674
MQ+ PDWQTSALSDGLHFTP GNKILF+EV+KTLE+
Sbjct: 733 MQQCPDWQTSALSDGLHFTPSGNKILFDEVLKTLES 840
Score = 49.6 bits (102), Expect(2) = 2e-022
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 675 SIGFSQERLPSDLPLFHEIDPKDPMKAF 758
S+GFSQ L SDLPLFHEIDP P ++F
Sbjct: 838 SVGFSQHSLRSDLPLFHEIDPXXPTESF 921
>gb|BF200908.1|BF200908 WHE0821-0824_N16_N16ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0821-0824_N16_N16, mRNA sequence
Length = 170
Score = 107 bits (228), Expect = 2e-022
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2 / +3
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLR 250
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+
Sbjct: 12 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALK 170
>gb|AL819311.1|AL819311 AL819311 n:129 Triticum aestivum cDNA clone E10_n129_plate_18, mRNA
sequence
Length = 377
Score = 94.1 bits (199), Expect(2) = 2e-022
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKA 223
RCP+D LKLGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+A
Sbjct: 5 RCPIDTLKLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEA 136
Score = 32.7 bits (65), Expect(2) = 2e-022
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 222 YCGKNVPSGFQC 257
>gb|CD890919.1|CD890919 G118.115L22F010719 G118 Triticum aestivum cDNA clone G118115L22,
mRNA sequence
Length = 628
Score = 106 bits (227), Expect = 3e-022
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2 / +2
Query: 92 RCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLR 250
RCP+DALKLGVCAN+LNGLIN LGTPP+ PCC+LI GLADL AAV LCT LR
Sbjct: 416 RCPIDALKLGVCANVLNGLINLQLGTPPKQPCCSLIXGLADLXAAVCLCTALR 574
>gb|BJ313405.1|BJ313405 BJ313405 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5d10 5', mRNA sequence
Length = 500
Score = 92.7 bits (196), Expect(2) = 6e-022
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2 / +2
Query: 110 LKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
L LGVCAN+LNGLIN LGTPP+ PCC+LIQGLADL+AAV LCT L+A
Sbjct: 5 LXLGVCANVLNGLINLQLGTPPKQPCCSLIQGLADLEAAVCLCTALKA 148
Score = 32.7 bits (65), Expect(2) = 6e-022
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 308 YCGRRVPSGFQC 343
YCG+ VPSGFQC
Sbjct: 203 YCGKNVPSGFQC 238
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 774,259,859
Number of Sequences: 636343
Number of extensions: 13394212
Number of successful extensions: 445958
Number of sequences better than 1.0e-020: 79
length of database: 122,413,413
effective HSP length: 54
effective length of database: 88,050,891
effective search space used: 24213995025
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)