TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276425.2.1
(753 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA605379.1|CA605379 wr1.pk0053.e2 wr1 Triticum aestivum ... 292 3e-078
gb|BQ839503.1|BQ839503 WHE4166_H04_P08ZS Wheat CS whole pla... 266 7e-075
gb|BE415956.1|BE415956 MUG002.G09R990520 ITEC MUG Wheat Spi... 280 2e-074
gb|BE417540.1|BE417540 MUG022.A11R990620 ITEC MUG Wheat Spi... 269 2e-071
gb|BQ805546.1|BQ805546 WHE3568_C05_E10ZS Wheat developing g... 227 9e-059
gb|CK157787.1|CK157787 FGAS038954 Triticum aestivum FGAS: T... 198 1e-057
gb|CA691627.1|CA691627 wlm96.pk049.e5 wlm96 Triticum aestiv... 182 4e-045
gb|CA652956.1|CA652956 wre1n.pk156.f8 wre1n Triticum aestiv... 159 4e-038
gb|CK194450.1|CK194450 FGAS002880 Triticum aestivum FGAS: L... 150 2e-035
gb|CA605241.1|CA605241 wr1.pk0051.f7 wr1 Triticum aestivum ... 127 9e-032
gb|AL814284.1|AL814284 AL814284 e:512 Triticum aestivum cDN... 104 1e-021
>gb|CA605379.1|CA605379 wr1.pk0053.e2 wr1 Triticum aestivum cDNA clone wr1.pk0053.e2 5'
end, mRNA sequence
Length = 584
Score = 292 bits (632), Expect = 3e-078
Identities = 109/125 (87%), Positives = 117/125 (93%)
Frame = +2 / +3
Query: 23 REKWGDKAYLENGYYLHGYWGILVDRYEEMLENYKPGLGDHRWPLVTHFVGCKPCGKFGD 202
REKWG+K YLENGYYLHGYWGILVDRYEEMLENY+PGLGDHRWPLVTHFVGCKPC KFGD
Sbjct: 3 REKWGNKVYLENGYYLHGYWGILVDRYEEMLENYQPGLGDHRWPLVTHFVGCKPCSKFGD 182
Query: 203 YPVERCLKNMDRAFNFGDNQILQMYGFTHKSLASRRVKRIRNETSNPLETKDELGLLHPA 382
YPVERCLK MDRAFNFGDNQ+L MYGF HKSLASRR+KRIRNETS+P + KD+ GLLHPA
Sbjct: 183 YPVERCLKQMDRAFNFGDNQVLHMYGFEHKSLASRRIKRIRNETSDPXDMKDDYGLLHPA 362
Query: 383 FKAVK 397
FKA+K
Sbjct: 363 FKALK 377
Score = 190 bits (410), Expect = 1e-047
Identities = 79/121 (65%), Positives = 97/121 (80%)
Frame = -3 / -1
Query: 388 LECWMKQPKLILCLKWVAGLVPDPLHSPAC**LVCEPIHLQDLVIPKIECTVHILEASLD 209
LE W++QP +IL + V GL+PDPL PA LV +PIH+Q LVIP+IE TVH+LEA L+
Sbjct: 368 LERWVEQPVIILHIXRVTGLIPDPLDPPARKRLVLKPIHVQHLVIPEIEGTVHLLEAPLN 189
Query: 208 RVVSKFATRLAPDKVCDEWPPVIAEPWLVILKHLLVPVDQDPPVAVEVVPILKVSLITPF 29
RV+ K LAPDKV D+WPP+IAEPWLVILKHLLVPV QDPP+A+EVV IL++ L+TPF
Sbjct: 188 RVIPKLGAWLAPDKVSDQWPPMIAEPWLVILKHLLVPVHQDPPIAMEVVAILEIHLVTPF 9
Query: 28 L 26
L
Sbjct: 8 L 6
Score = 177 bits (381), Expect = 1e-043
Identities = 76/89 (85%), Positives = 77/89 (86%)
Frame = -1 / -2
Query: 288 CVNPYICKIWLSPKLNARSIFLRHRSTG*SPNLPHGLHPTKCVTSGHR*SPSPGL*FSSI 109
C NPY+C WLSPKL ARSI LRHRSTG*SPNL HGLHPTK VTSGHR*SPSPG *FSSI
Sbjct: 268 CSNPYMCNTWLSPKLKARSICLRHRSTG*SPNLEHGLHPTK*VTSGHR*SPSPGW*FSSI 89
Query: 108 SSYLSTKIPQ*PWR*YPFSR*ALSPHFSR 22
SSYLSTKIPQ*PWR* PFSR L PHFSR
Sbjct: 88 SSYLSTKIPQ*PWR**PFSRYTLLPHFSR 2
Score = 144 bits (310), Expect = 8e-034
Identities = 63/90 (70%), Positives = 72/90 (80%)
Frame = +1 / +2
Query: 28 EMG**GLP*EWVLPPRLLGDLGRQVRGDA*ELQARARRSPVATRHTLCRVQAVWQIWRLP 207
EMG* G+ EW+LPP LLGDLG QVRGDA*EL ARARRS VAT H+LCRVQA+ Q+W LP
Sbjct: 8 EMG*QGVSREWLLPPWLLGDLGGQVRGDA*ELPARARRSSVATGHSLCRVQAMLQVWGLP 187
Query: 208 CRAMPQEYGPCIQFWG*PDLADVWVHTQVT 297
C A+PQ GPC+QF G*P +A VWV QV+
Sbjct: 188 C*AVPQADGPCLQFRG*PGVAHVWV*AQVS 277
Score = 132 bits (283), Expect = 4e-030
Identities = 68/123 (55%), Positives = 70/123 (56%)
Frame = +3 / +1
Query: 21 SARNGVIRLTLRMXXXXXXXXXXXXXXXRRCLRITSQGSAITGGHSSHTLSGASRVANLE 200
S RNGV R RM RRCLRITSQGSAI GGH S TLSGAS +L
Sbjct: 1 SVRNGVTRCISRMATTSMAIGGSWWTGTRRCLRITSQGSAIIGGHWSLTLSGASHAPSLG 180
Query: 201 TTLSSDASRIWTVHSILGITRSCRCMGSHTSH*QAGE*RGSGTRPATHLRQRMSLGCFIQ 380
TL S AS WTV SI GITR C CMG TS +AG RGSG RP T RM GC Q
Sbjct: 181 ITLLSGASSRWTVPSISGITRCCTCMGLSTSLLRAGGSRGSGMRPVTLXI*RMITGCSTQ 360
Query: 381 HSR 389
SR
Sbjct: 361 RSR 369
>gb|BQ839503.1|BQ839503 WHE4166_H04_P08ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4166_H04_P08, mRNA sequence
Length = 552
Score = 266 bits (575), Expect(3) = 7e-075
Identities = 102/124 (82%), Positives = 113/124 (91%)
Frame = +2 / -3
Query: 71 HGYWGILVDRYEEMLENYKPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKNMDRAFNF 250
HGYWGILVDRYEEMLENY+PGLGDHRWPLVTHFVGCKPC KFGDYPVERCLK MDRAFNF
Sbjct: 550 HGYWGILVDRYEEMLENYQPGLGDHRWPLVTHFVGCKPCSKFGDYPVERCLKQMDRAFNF 371
Query: 251 GDNQILQMYGFTHKSLASRRVKRIRNETSNPLETKDELGLLHPAFKAVKTST**LEYNST 430
GDNQ+L MYGF HKSLASRR+KRIRNE S+PL+ KD+ GLLHPAFKA+KT+T**L Y ++
Sbjct: 370 GDNQVLHMYGFEHKSLASRRIKRIRNEPSDPLDMKDDYGLLHPAFKALKTTT**L*YTTS 191
Query: 431 CYFL 442
+ L
Sbjct: 190 TFIL 179
Score = 185 bits (398), Expect(3) = 3e-051
Identities = 78/117 (66%), Positives = 93/117 (79%)
Frame = -3 / +2
Query: 421 VL*LSCGSLHSLECWMKQPKLILCLKWVAGLVPDPLHSPAC**LVCEPIHLQDLVIPKIE 242
VL*LSC SL LE W++QP +IL +K V GL+PDPL PA LV +PIH+Q LVIP+IE
Sbjct: 200 VL*LSCSSLEGLERWVEQPVIILHIKRVTGLIPDPLDPPARKRLVLKPIHVQHLVIPEIE 379
Query: 241 CTVHILEASLDRVVSKFATRLAPDKVCDEWPPVIAEPWLVILKHLLVPVDQDPPVAV 71
TVH+LEA L+RV+ K LAPDKV D+WPP+IAEPWLVILKHLLVPV QDPP+A+
Sbjct: 380 GTVHLLEAPLNRVIPKLGAWLAPDKVSDQWPPMIAEPWLVILKHLLVPVHQDPPIAM 550
Score = 153 bits (329), Expect(2) = 4e-040
Identities = 64/73 (87%), Positives = 65/73 (89%)
Frame = -1 / +3
Query: 288 CVNPYICKIWLSPKLNARSIFLRHRSTG*SPNLPHGLHPTKCVTSGHR*SPSPGL*FSSI 109
C NPY+C WLSPKL ARSI LRHRSTG*SPNL HGLHPTK VTSGHR*SPSPG *FSSI
Sbjct: 333 CSNPYMCNTWLSPKLKARSICLRHRSTG*SPNLEHGLHPTK*VTSGHR*SPSPGW*FSSI 512
Query: 108 SSYLSTKIPQ*PW 70
SSYLSTKIPQ*PW
Sbjct: 513 SSYLSTKIPQ*PW 551
Score = 132 bits (282), Expect(3) = 3e-033
Identities = 67/107 (62%), Positives = 70/107 (65%)
Frame = +3 / -1
Query: 105 RRCLRITSQGSAITGGHSSHTLSGASRVANLETTLSSDASRIWTVHSILGITRSCRCMGS 284
RRCLRITSQGSAI GGH S TLSGAS +L TL S AS WTV SI GITR C CMG
Sbjct: 516 RRCLRITSQGSAIIGGHWSLTLSGASHAPSLGITLLSGASSRWTVPSISGITRCCTCMGL 337
Query: 285 HTSH*QAGE*RGSGTRPATHLRQRMSLGCFIQHSRL*RLPHDN*STI 425
TS +AG RGSG P T L RM GC Q SR RL HDN ST+
Sbjct: 336 STSLLRAGGSRGSGMSPVTLLI*RMITGCSTQRSRPSRLLHDNYSTL 196
Score = 125 bits (267), Expect(2) = 3e-028
Identities = 54/76 (71%), Positives = 61/76 (80%)
Frame = +1 / -2
Query: 70 PRLLGDLGRQVRGDA*ELQARARRSPVATRHTLCRVQAVWQIWRLPCRAMPQEYGPCIQF 249
P LLGDLG QVRGDA*EL ARARRS VAT H+LCRVQA+ Q+W LPC A+PQ GPC+QF
Sbjct: 551 PWLLGDLGGQVRGDA*ELPARARRSSVATGHSLCRVQAMLQVWGLPC*AVPQADGPCLQF 372
Query: 250 WG*PDLADVWVHTQVT 297
G*P +A VWV QV+
Sbjct: 371 RG*PGVAHVWV*AQVS 324
Score = 32.2 bits (64), Expect(2) = 4e-040
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1 / +3
Query: 423 LYSNYHVEVFTALNAG*SNP 364
+Y +YHV V ALNAG SNP
Sbjct: 198 VYYSYHVVVLRALNAGWSNP 257
Score = 31.3 bits (62), Expect(3) = 7e-075
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2 / -2
Query: 485 FCRIG*QQKFGLGLWDGYLCCNVRC* 562
F G*Q L DGYLCC V+C*
Sbjct: 131 FVDSG*QGNLVLVSGDGYLCCTVKC* 54
Score = 30.9 bits (61), Expect(3) = 3e-051
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1 / +1
Query: 561 *HLTLQQRYPSHNPNPNFCCHP 496
*H T+Q RYPS + F C+P
Sbjct: 55 *HFTVQHRYPSPDTKTRFPCYP 120
Score = 25.8 bits (50), Expect(3) = 3e-051
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 506 VVTRFYKKNTLDLDPTGSRTNQENNK 429
V K+ D DP SRTN++N +
Sbjct: 113 VTLSLQKEEL*DFDPRESRTNEQNKR 190
Score = 25.4 bits (49), Expect(3) = 3e-033
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 496 RVTTEVWVGVMGWISLL*CEVL 561
RVT + G+ G IS+L CE+L
Sbjct: 120 RVTRKSGFGIRGRISMLYCEML 55
Score = 23.5 bits (45), Expect(3) = 3e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 434 YFLGSF*ILLGLNP 475
YF+ SF*ILL NP
Sbjct: 185 YFVRSF*ILLDQNP 144
Score = 23.5 bits (45), Expect(3) = 7e-075
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 433 LFSWFVLDPVGSKS 474
LF FVLD +GSKS
Sbjct: 186 LFCSFVLDSLGSKS 145
Score = 22.6 bits (43), Expect(2) = 3e-028
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3 / -3
Query: 420 TIQLVIFLVRSRSCWV*IQSVLFVESGDNRSLGWGY 527
T I VRSR W+ I F+ + N+ + + Y
Sbjct: 199 TTSTFILFVRSRFSWIKIL*FFFL*TQGNKEIWFWY 92
>gb|BE415956.1|BE415956 MUG002.G09R990520 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG002.G09, mRNA sequence
Length = 989
Score = 280 bits (605), Expect = 2e-074
Identities = 104/122 (85%), Positives = 112/122 (91%)
Frame = +2 / +3
Query: 2 VYILATQREKWGDKAYLENGYYLHGYWGILVDRYEEMLENYKPGLGDHRWPLVTHFVGCK 181
VYILATQREKWG+K YLENGYYLHGYWGILVDRYEEMLENY+PGLGDHRWPLVTHFVGCK
Sbjct: 270 VYILATQREKWGNKVYLENGYYLHGYWGILVDRYEEMLENYQPGLGDHRWPLVTHFVGCK 449
Query: 182 PCGKFGDYPVERCLKNMDRAFNFGDNQILQMYGFTHKSLASRRVKRIRNETSNPLETKDE 361
PC KFGDYPVERCLK MDRAFNFGDNQ+L MYGF HKSL +R++RIRNETS PL+ KD+
Sbjct: 450 PCSKFGDYPVERCLKQMDRAFNFGDNQVLHMYGFEHKSLGEQRIQRIRNETSEPLDMKDD 629
Query: 362 LG 367
G
Sbjct: 630 YG 635
Score = 187 bits (402), Expect = 2e-046
Identities = 80/96 (83%), Positives = 83/96 (86%)
Frame = -1 / -2
Query: 288 CVNPYICKIWLSPKLNARSIFLRHRSTG*SPNLPHGLHPTKCVTSGHR*SPSPGL*FSSI 109
C NPY+C WLSPKL ARSI LRHRSTG*SPNL HGLHPTK VTSGHR*SPSPG *FSSI
Sbjct: 556 CSNPYMCNTWLSPKLKARSICLRHRSTG*SPNLEHGLHPTK*VTSGHR*SPSPGW*FSSI 377
Query: 108 SSYLSTKIPQ*PWR*YPFSR*ALSPHFSRCVARMYT 1
SSYLSTK+PQ*PWR* PFSR L PHFSR VAR+YT
Sbjct: 376 SSYLSTKMPQ*PWR**PFSRYTLLPHFSRWVARIYT 269
Score = 170 bits (365), Expect = 2e-041
Identities = 73/122 (59%), Positives = 91/122 (74%)
Frame = -3 / -1
Query: 367 PKLILCLKWVAGLVPDPLHSPAC**LVCEPIHLQDLVIPKIECTVHILEASLDRVVSKFA 188
P +IL ++ GL+PDPL LV +PIH+Q LVIP+IE VH+LEA L+RV+ K
Sbjct: 635 PVIILHIQRFTGLIPDPLDPLLAKRLVLKPIHVQHLVIPEIEGPVHLLEAPLNRVIPKLG 456
Query: 187 TRLAPDKVCDEWPPVIAEPWLVILKHLLVPVDQDPPVAVEVVPILKVSLITPFLALCRED 8
LAPDKV D+WPP+IAEP LVILKHLLVPV QD P+A+EVV IL++ L+TPFL L ED
Sbjct: 455 AWLAPDKVSDQWPPMIAEPRLVILKHLLVPVHQDAPIAMEVVAILEIHLVTPFLTLGSED 276
Query: 7 VH 2
+H
Sbjct: 275 IH 270
Score = 142 bits (304), Expect = 5e-033
Identities = 65/99 (65%), Positives = 75/99 (75%)
Frame = +1 / +2
Query: 1 GVHPRDTAREMG**GLP*EWVLPPRLLGDLGRQVRGDA*ELQARARRSPVATRHTLCRVQ 180
GV+PR A EMG* G+ EW+LPP LLG LG QVRGDA*EL A ARRS VAT H+LCRVQ
Sbjct: 269 GVYPRYPA*EMG*QGVSREWLLPPWLLGHLGGQVRGDA*ELPAGARRSSVATGHSLCRVQ 448
Query: 181 AVWQIWRLPCRAMPQEYGPCIQFWG*PDLADVWVHTQVT 297
A+ Q+W LPC A+PQ GP +QF G*P +A VWV QV+
Sbjct: 449 AMLQVWGLPC*AVPQADGPGLQFRG*PGVAHVWV*AQVS 565
Score = 115 bits (246), Expect = 5e-025
Identities = 62/122 (50%), Positives = 65/122 (53%)
Frame = +3 / +1
Query: 3 CTSSRHSARNGVIRLTLRMXXXXXXXXXXXXXXXRRCLRITSQGSAITGGHSSHTLSGAS 182
C SS S RNGV R RM RRCLRITS+GSAI GGH S TLSGAS
Sbjct: 271 CISSLPSVRNGVTRCISRMATTSMAIGASWWTGTRRCLRITSRGSAIIGGHWSLTLSGAS 450
Query: 183 RVANLETTLSSDASRIWTVHSILGITRSCRCMGSHTSH*QAGE*RGSGTRPATHLRQRMS 362
+L TL S AS WT SI GITR C CMG TS + RGSG RP RM
Sbjct: 451 HAPSLGITLLSGASSRWTGPSISGITRCCTCMGLSTSLLASRGSRGSGMRPVNLWI*RMI 630
Query: 363 LG 368
G
Sbjct: 631 TG 636
>gb|BE417540.1|BE417540 MUG022.A11R990620 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG022.A11, mRNA sequence
Length = 600
Score = 269 bits (582), Expect = 2e-071
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = +2 / +3
Query: 2 VYILATQREKWGDKAYLENGYYLHGYWGILVDRYEEMLENYKPGLGDHRWPLVTHFVGCK 181
VYILATQREKWG+K YLENGYYLHGYWGILVDRYEEMLENY+PGLGDHRWPLVTHFVGCK
Sbjct: 270 VYILATQREKWGNKVYLENGYYLHGYWGILVDRYEEMLENYQPGLGDHRWPLVTHFVGCK 449
Query: 182 PCGKFGDYPVERCLKNMDRAFNFGDNQILQMYGFTHKSLASRRVKRIRNE 331
PC KFGDYPVERCLK MDRAFNFGDNQ+L MYGF HKSLASRR+KRIRNE
Sbjct: 450 PCSKFGDYPVERCLKQMDRAFNFGDNQVLHMYGFEHKSLASRRIKRIRNE 599
Score = 187 bits (402), Expect = 2e-046
Identities = 80/96 (83%), Positives = 83/96 (86%)
Frame = -1 / -3
Query: 288 CVNPYICKIWLSPKLNARSIFLRHRSTG*SPNLPHGLHPTKCVTSGHR*SPSPGL*FSSI 109
C NPY+C WLSPKL ARSI LRHRSTG*SPNL HGLHPTK VTSGHR*SPSPG *FSSI
Sbjct: 556 CSNPYMCNTWLSPKLKARSICLRHRSTG*SPNLEHGLHPTK*VTSGHR*SPSPGW*FSSI 377
Query: 108 SSYLSTKIPQ*PWR*YPFSR*ALSPHFSRCVARMYT 1
SSYLSTK+PQ*PWR* PFSR L PHFSR VAR+YT
Sbjct: 376 SSYLSTKMPQ*PWR**PFSRYTLLPHFSRWVARIYT 269
Score = 167 bits (360), Expect = 1e-040
Identities = 71/110 (64%), Positives = 86/110 (78%)
Frame = -3 / -2
Query: 331 LVPDPLHSPAC**LVCEPIHLQDLVIPKIECTVHILEASLDRVVSKFATRLAPDKVCDEW 152
L+PDPL PA LV +PIH+Q LVIP+IE VH+LEA L+RV+ K LAPDKV D+W
Sbjct: 599 LIPDPLDPPARKRLVLKPIHVQHLVIPEIEGPVHLLEAPLNRVIPKLGAWLAPDKVSDQW 420
Query: 151 PPVIAEPWLVILKHLLVPVDQDPPVAVEVVPILKVSLITPFLALCREDVH 2
PP+IAEP LVILKHLLVPV QD P+A+EVV IL++ L+TPFL L ED+H
Sbjct: 419 PPMIAEPRLVILKHLLVPVHQDAPIAMEVVAILEIHLVTPFLTLGSEDIH 270
Score = 142 bits (304), Expect = 5e-033
Identities = 65/99 (65%), Positives = 75/99 (75%)
Frame = +1 / +2
Query: 1 GVHPRDTAREMG**GLP*EWVLPPRLLGDLGRQVRGDA*ELQARARRSPVATRHTLCRVQ 180
GV+PR A EMG* G+ EW+LPP LLG LG QVRGDA*EL A ARRS VAT H+LCRVQ
Sbjct: 269 GVYPRYPA*EMG*QGVSREWLLPPWLLGHLGGQVRGDA*ELPAGARRSSVATGHSLCRVQ 448
Query: 181 AVWQIWRLPCRAMPQEYGPCIQFWG*PDLADVWVHTQVT 297
A+ Q+W LPC A+PQ GP +QF G*P +A VWV QV+
Sbjct: 449 AMLQVWGLPC*AVPQADGPGLQFRG*PGVAHVWV*AQVS 565
Score = 117 bits (251), Expect = 1e-025
Identities = 60/110 (54%), Positives = 63/110 (57%)
Frame = +3 / +1
Query: 3 CTSSRHSARNGVIRLTLRMXXXXXXXXXXXXXXXRRCLRITSQGSAITGGHSSHTLSGAS 182
C SS S RNGV R RM RRCLRITS+GSAI GGH S TLSGAS
Sbjct: 271 CISSLPSVRNGVTRCISRMATTSMAIGASWWTGTRRCLRITSRGSAIIGGHWSLTLSGAS 450
Query: 183 RVANLETTLSSDASRIWTVHSILGITRSCRCMGSHTSH*QAGE*RGSGTR 332
+L TL S AS WT SI GITR C CMG TS +AG RGSG R
Sbjct: 451 HAPSLGITLLSGASSRWTGPSISGITRCCTCMGLSTSLLRAGGSRGSGMR 600
>gb|BQ805546.1|BQ805546 WHE3568_C05_E10ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3568_C05_E10, mRNA sequence
Length = 721
Score = 227 bits (491), Expect = 9e-059
Identities = 78/121 (64%), Positives = 102/121 (84%)
Frame = +2 / +2
Query: 2 VYILATQREKWGDKAYLENGYYLHGYWGILVDRYEEMLENYKPGLGDHRWPLVTHFVGCK 181
+++L +Q+EKW DK Y+EN YYLHG+W LVD+YEEM+EN+ PGLGD RWP VTHFVGCK
Sbjct: 53 IHLLLSQKEKWMDKVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCK 232
Query: 182 PCGKFGDYPVERCLKNMDRAFNFGDNQILQMYGFTHKSLASRRVKRIRNETSNPLETKDE 361
PCG +GDYPV+RCLK+M+RAFNF DNQ+L++YGF HK L S ++KRIR++T+ P+ K+
Sbjct: 233 PCGSYGDYPVDRCLKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKEN 412
Query: 362 L 364
L
Sbjct: 413 L 415
Score = 142 bits (305), Expect = 4e-033
Identities = 64/93 (68%), Positives = 68/93 (73%)
Frame = -1 / -2
Query: 288 CVNPYICKIWLSPKLNARSIFLRHRSTG*SPNLPHGLHPTKCVTSGHR*SPSPGL*FSSI 109
C PY WLS KLNARSI LRHRSTG*SP LPHGLHPTKCVT+GHR SPSPG FS I
Sbjct: 339 CAKPYRRSTWLSAKLNARSILLRHRSTG*SP*LPHGLHPTKCVTNGHRSSPSPGWWFSII 160
Query: 108 SSYLSTKIPQ*PWR*YPFSR*ALSPHFSRCVAR 10
SSYLST Q P +*Y FS LS HFS C ++
Sbjct: 159 SSYLSTSPAQKPCK*YEFSIYTLSIHFSFCESK 61
Score = 124 bits (265), Expect = 1e-027
Identities = 55/121 (45%), Positives = 78/121 (64%)
Frame = -3 / -1
Query: 364 KLILCLKWVAGLVPDPLHSPAC**LVCEPIHLQDLVIPKIECTVHILEASLDRVVSKFAT 185
K++L + + GL PDP A LVCE I Q LVI KI+C++H LE + V++ +
Sbjct: 415 KVLLVVNRLCGLTPDPFDLRAFQPLVCETIQAQHLVIGKIKCSLHTLETPVYWVITIASA 236
Query: 184 RLAPDKVCDEWPPVIAEPWLVILKHLLVPVDQDPPVAVEVVPILKVSLITPFLALCREDV 5
LAP+KVC +WPP+I +PW+V+L HLLV V Q P V+VV IL + L+ P L L ++V
Sbjct: 235 WLAPNKVCHKWPPLIPKPWMVVLHHLLVLVHQPSPETVQVV*ILYIHLVHPLLLLREQEV 56
Query: 4 H 2
+
Sbjct: 55 Y 53
>gb|CK157787.1|CK157787 FGAS038954 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 847
Score = 198 bits (426), Expect(3) = 1e-057
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +2 / -3
Query: 149 WPLVTHFVGCKPCGKFGDYPVERCLKNMDRAFNFGDNQILQMYGFTHKSLASRRVKRIRN 328
WPLVT FVGCKPC KFGDYPVERCLK MDRAFNFGDNQ+L MYGF HKSLASRR+KRIRN
Sbjct: 605 WPLVTRFVGCKPCSKFGDYPVERCLKQMDRAFNFGDNQVLHMYGFEHKSLASRRIKRIRN 426
Query: 329 ETSNPLETKDELGLLHPAFKAVKTST**LEYNSTCYFL 442
ETS+PL+ KD+ GLLHPAFKA+KTST**L Y ++ + L
Sbjct: 425 ETSDPLDMKDDYGLLHPAFKALKTST**L*YTTSTFTL 312
Score = 126 bits (269), Expect(4) = 3e-037
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = -3 / +3
Query: 421 VL*LSCGSLHSLECWMKQPKLILCLKWVAGLVPDPLHSPAC**LVCEPIHLQDLVIPKIE 242
VL*LSC SL LE W++QP +IL +K V GL+PDPL PA LV +PIH+Q LVIP+IE
Sbjct: 333 VL*LSCRSLEGLERWVEQPVIILHIKRVTGLIPDPLDPPARKRLVLKPIHVQHLVIPEIE 512
Query: 241 CTVHILEASLDRVVSKFATRLAPDKVCDEWP 149
TVH+LEA L+RV+ K LAPDK D+WP
Sbjct: 513 GTVHLLEAPLNRVIPKLGAWLAPDKASDQWP 605
Score = 101 bits (215), Expect(3) = 3e-026
Identities = 53/94 (56%), Positives = 57/94 (60%)
Frame = +3 / -1
Query: 144 TGGHSSHTLSGASRVANLETTLSSDASRIWTVHSILGITRSCRCMGSHTSH*QAGE*RGS 323
+ GH S LSGAS +L TL S AS WTV SI GITR C CMG TS +AG RGS
Sbjct: 610 SSGHWSLALSGASHAPSLGITLLSGASSRWTVPSISGITRCCTCMGLSTSLLRAGGSRGS 431
Query: 324 GTRPATHLRQRMSLGCFIQHSRL*RLPHDN*STI 425
G RP T L RM GC Q SR RL HDN ST+
Sbjct: 430 GMRPVTLLI*RMITGCSTQRSRPSRLLHDNYSTL 329
Score = 95.9 bits (203), Expect(3) = 6e-027
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = -1 / +1
Query: 288 CVNPYICKIWLSPKLNARSIFLRHRSTG*SPNLPHGLHPTKCVTSG 151
C NPY+C WLSPKL ARSI LRHRSTG*SPNL HGLHPTK VTSG
Sbjct: 466 CSNPYMCNTWLSPKLKARSICLRHRSTG*SPNLEHGLHPTKRVTSG 603
Score = 79.4 bits (167), Expect(3) = 7e-021
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +1 / -2
Query: 148 VATRHTLCRVQAVWQIWRLPCRAMPQEYGPCIQFWG*PDLADVWVHTQVT 297
+AT H+LCRVQA+ Q+W LPC A+PQ GPC+QF G*P +A VWV QV+
Sbjct: 606 LATGHSLCRVQAMLQVWGLPC*AVPQADGPCLQFRG*PGVAHVWV*AQVS 457
Score = 35.4 bits (71), Expect(3) = 6e-027
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / +1
Query: 423 LYSNYHVEVFTALNAG*SNP 364
+Y +YHVEV ALNAG SNP
Sbjct: 331 VYYSYHVEVLRALNAGWSNP 390
Score = 34.1 bits (68), Expect(3) = 1e-057
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 101 YEEMLENYKPGLGDH 145
YEEM ENY GLGDH
Sbjct: 651 YEEMFENYPAGLGDH 607
Score = 31.3 bits (62), Expect(3) = 1e-057
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2 / -2
Query: 485 FCRIG*QQKFGLGLWDGYLCCNVRC* 562
F G*Q L DGYLCC V+C*
Sbjct: 264 FVDSG*QGNLVLVSGDGYLCCTVKC* 187
Score = 30.9 bits (61), Expect(4) = 3e-037
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +1
Query: 145 VIAEPWLVILKHLLVP 98
+IAEP VILKHLLVP
Sbjct: 607 MIAEPCWVILKHLLVP 654
Score = 30.9 bits (61), Expect(4) = 3e-037
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1 / +2
Query: 561 *HLTLQQRYPSHNPNPNFCCHP 496
*H T+Q RYPS + F C+P
Sbjct: 188 *HFTVQHRYPSPDTKTRFPCYP 253
Score = 30.4 bits (60), Expect(3) = 3e-026
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 105 RRCLRITSQGSAI 143
RRCLRIT QGSAI
Sbjct: 647 RRCLRITQQGSAI 609
Score = 29.9 bits (59), Expect(3) = 7e-021
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1 / -2
Query: 340 PT*DKG*AWVASSSIQGCEDFHMIIRVQF 426
P+* +G* VA S+QG +DF+MI V +
Sbjct: 414 PS*YEG*LRVAPPSVQGPQDFYMITIVHY 328
Score = 29.5 bits (58), Expect(3) = 7e-021
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1 / -1
Query: 64 LPPRLLGDLGRQVRGDA*ELQARARRS 144
LP G +VRGD *EL +RARRS
Sbjct: 688 LPCLXGGSWSDRVRGDV*ELPSRARRS 608
Score = 28.1 bits (55), Expect(3) = 6e-027
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1 / +2
Query: 147 R*SPSPGL*FSSISSY 100
R*SPSP *FS+ISSY
Sbjct: 605 R*SPSPAG*FSNISSY 652
Score = 25.4 bits (49), Expect(3) = 3e-026
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 496 RVTTEVWVGVMGWISLL*CEVL 561
RVT + G+ G IS+L CE+L
Sbjct: 253 RVTRKSGFGIRGRISMLYCEML 188
Score = 24.0 bits (46), Expect(4) = 3e-037
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2 / +3
Query: 506 VVTRFYKKNTLDLDPTGSRTNQENNKLNCTLIIMWKS 396
V K+ D DP SRTN+++ + + L + +S
Sbjct: 246 VTLSLQKEEL*DFDPRESRTNEQSKRGSSVL*LSCRS 356
>gb|CA691627.1|CA691627 wlm96.pk049.e5 wlm96 Triticum aestivum cDNA clone wlm96.pk049.e5 5'
end, mRNA sequence
Length = 494
Score = 182 bits (392), Expect = 4e-045
Identities = 67/83 (80%), Positives = 69/83 (83%)
Frame = +2 / +2
Query: 2 VYILATQREKWGDKAYLENGYYLHGYWGILVDRYEEMLENYKPGLGDHRWPLVTHFVGCK 181
VYIL T REKWG+ YLENGYYLHGYWGILV RY EML NY+PGLGDHRW LVTHFVGCK
Sbjct: 116 VYILXTHREKWGNXVYLENGYYLHGYWGILVXRYXEMLXNYQPGLGDHRWXLVTHFVGCK 295
Query: 182 PCGKFGDYPVERCLKNMDRAFNF 250
PC KFGDYPVERCL MDR F
Sbjct: 296 PCSKFGDYPVERCLXQMDRGLQF 364
Score = 143 bits (306), Expect = 3e-033
Identities = 64/79 (81%), Positives = 66/79 (83%)
Frame = -1 / -3
Query: 237 RSIFLRHRSTG*SPNLPHGLHPTKCVTSGHR*SPSPGL*FSSISSYLSTKIPQ*PWR*YP 58
RSI LRHRSTG*SPNL HGLHPTK VTS HR*SPSPG * SSISSYL TK+PQ*PWR* P
Sbjct: 351 RSIXLRHRSTG*SPNLEHGLHPTK*VTSXHR*SPSPGW*XSSISSYLXTKMPQ*PWR**P 172
Query: 57 FSR*ALSPHFSRCVARMYT 1
FSR L PHFSR V R+YT
Sbjct: 171 FSRYTLLPHFSRWVXRIYT 115
Score = 112 bits (240), Expect = 4e-024
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = -3 / -2
Query: 250 KIECTVHILEASLDRVVSKFATRLAPDKVCDEWPPVIAEPWLVILKHLLVPVDQDPPVAV 71
K++ VH+ EA L+RV+ K LAPDKV D+ PP+IAEP LVI KHL VP QD P+A+
Sbjct: 364 KLKAPVHLXEAPLNRVIPKLGAWLAPDKVSDQXPPMIAEPRLVIXKHLXVPXHQDAPIAM 185
Query: 70 EVVPILKVSLITPFLALCREDVH 2
EVV IL++ +TPFL + ED+H
Sbjct: 184 EVVAILEIHXVTPFLTVGXEDIH 116
Score = 102 bits (217), Expect = 5e-021
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = +1 / +1
Query: 1 GVHPRDTAREMG**GLP*EWVLPPRLLGDLGRQVRGDA*ELQARARRSPVATRHTLCRVQ 180
GV+P EMG* + EW+LPP LLG LG QVR DA* L ARRS V T H+LCRVQ
Sbjct: 115 GVYPXYPP*EMG*QXVSREWLLPPWLLGHLGGQVRXDA*XLPTGARRSSVXTGHSLCRVQ 294
Query: 181 AVWQIWRLPCRAMPQEYGP 237
A+ Q+W LPC A+PQ GP
Sbjct: 295 AMLQVWGLPC*AVPQXNGP 351
>gb|CA652956.1|CA652956 wre1n.pk156.f8 wre1n Triticum aestivum cDNA clone wre1n.pk156.f8 5'
end, mRNA sequence
Length = 529
Score = 159 bits (341), Expect = 4e-038
Identities = 56/90 (62%), Positives = 73/90 (81%)
Frame = +2 / +1
Query: 89 LVDRYEEMLENYKPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKNMDRAFNFGDNQIL 268
LVD+YEEM+E + PGLGD RWP +THFVG KPCG +GDYPVE+CL M+RAFNF DNQ+L
Sbjct: 1 LVDKYEEMMEKHHPGLGDERWPFITHFVGXKPCGSYGDYPVEQCLTGMERAFNFADNQVL 180
Query: 269 QMYGFTHKSLASRRVKRIRNETSNPLETKD 358
++YGF H+SL + +VK + N T++PL K+
Sbjct: 181 RLYGFRHRSLTNPKVKPVANRTASPLLNKE 270
>gb|CK194450.1|CK194450 FGAS002880 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 150 bits (322), Expect = 2e-035
Identities = 53/92 (57%), Positives = 72/92 (78%)
Frame = +2 / -2
Query: 83 GILVDRYEEMLENYKPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKNMDRAFNFGDNQ 262
G LV++YEEM+E + PGLG+ RWP +T FVGCKP G++G+YPVE+CL M+RAF F DNQ
Sbjct: 704 GGLVNKYEEMMEKHHPGLGEERWPFITQFVGCKPSGRYGEYPVEQCLTGMERAFKFADNQ 525
Query: 263 ILQMYGFTHKSLASRRVKRIRNETSNPLETKD 358
+L++YGF H+SL + +VK + N T NPL K+
Sbjct: 524 VLRLYGFRHRSLTNPKVKPVANRTGNPLLKKE 429
>gb|CA605241.1|CA605241 wr1.pk0051.f7 wr1 Triticum aestivum cDNA clone wr1.pk0051.f7 5'
end, mRNA sequence
Length = 396
Score = 127 bits (272), Expect(2) = 9e-032
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = +2 / +2
Query: 218 CLKNMDRAFNFGDNQILQMYGFTHKSLASRRVKRIRNETSNPLETKDELGLLHPAFKAVK 397
CLK MDRAFNFGDNQ+L MYGF HKSLASRR+KRIRNETS+PL+ KD+ GLLHPAFKAVK
Sbjct: 2 CLKQMDRAFNFGDNQVLHMYGFEHKSLASRRIKRIRNETSDPLDMKDDYGLLHPAFKAVK 181
Score = 30.4 bits (60), Expect(2) = 9e-032
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +1
Query: 506 QKFGLGLWDGYLCCNVRC*ENYVMFI 583
+KFGLG Y C V+C EN M +
Sbjct: 301 RKFGLGXTGRYHVCTVKCLENEFMLL 378
>gb|AL814284.1|AL814284 AL814284 e:512 Triticum aestivum cDNA clone D08_e512_plate_7, mRNA
sequence
Length = 603
Score = 104 bits (222), Expect = 1e-021
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2 / +1
Query: 2 VYILATQREKWGDKAYLENGYYLHGYWGILVDRYEEMLENY 124
VYILATQREKWG+K YLENGYYLHGYWGILVDRYEEMLENY
Sbjct: 481 VYILATQREKWGNKVYLENGYYLHGYWGILVDRYEEMLENY 603
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 738,207,516
Number of Sequences: 636343
Number of extensions: 11126932
Number of successful extensions: 72152
Number of sequences better than 1.0e-020: 19
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 17471385098
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)