TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCT2a11.yg.2.1
(532 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG557199.1|BG557199 EM1_43_H09.g1_A002 Embryo 1 (EM1) So... 94 8e-023
gb|CX620938.1|CX620938 GABR1_55_B01.b1_A002 GA- or brassino... 94 1e-022
gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1... 94 1e-022
gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1... 94 1e-022
gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1... 94 1e-022
gb|BE361214.1|BE361214 DG1_70_H03.g1_A002 Dark Grown 1 (DG1... 94 1e-022
gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-tr... 94 1e-022
gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassino... 94 1e-022
gb|CX616148.1|CX616148 GABR1_26_D10.b1_A002 GA- or brassino... 94 1e-022
gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1... 94 1e-022
gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassino... 94 2e-022
gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassino... 94 2e-022
gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkal... 94 2e-022
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 94 4e-022
gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1... 94 5e-022
gb|BF586059.1|BF586059 FM1_26_B07.g1_A003 Floral-Induced Me... 93 6e-022
gb|CF430559.1|CF430559 NIT1_3_G08.b1_A002 Nitrogen-deficien... 90 1e-021
gb|AW922651.1|AW922651 DG1_20_B09.g1_A002 Dark Grown 1 (DG1... 88 5e-021
>gb|BG557199.1|BG557199 EM1_43_H09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 94.1 bits (199), Expect(2) = 8e-023
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 58 ALEDHTRLDYIQSHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 237
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 238 CERTMKRSARWLQEFNGA 291
Score = 34.5 bits (69), Expect(2) = 8e-023
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 437 YFARLEVVEAYSPAPQLIMQCS 502
>gb|CX620938.1|CX620938 GABR1_55_B01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_55_B01_A002 3', mRNA sequence
Length = 543
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 49 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 228
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 229 CERTMKRSARWLQEFNGA 282
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 428 YFARLEVVEAYSPAPQLIMQCS 493
>gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 563
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / -2
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 460 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 281
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 280 CERTMKRSARWLQEFNGA 227
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / -3
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 81 YFARLEVVEAYSPAPQLIMQCS 16
>gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +2
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 101 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 280
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 281 CERTMKRSARWLQEFNGA 334
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +3
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 480 YFARLEVVEAYSPAPQLIMQCS 545
>gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 596
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 106 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 285
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 286 CERTMKRSARWLQEFNGA 339
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 485 YFARLEVVEAYSPAPQLIMQCS 550
>gb|BE361214.1|BE361214 DG1_70_H03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 596
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 88 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 267
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 268 CERTMKRSARWLQEFNGA 321
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 467 YFARLEVVEAYSPAPQLIMQCS 532
>gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_32_D07_A002 3', mRNA sequence
Length = 597
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 103 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 282
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 283 CERTMKRSARWLQEFNGA 336
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 482 YFARLEVVEAYSPAPQLIMQCS 547
>gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_18_G09_A002 3', mRNA sequence
Length = 661
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +3
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 174 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 353
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 354 CERTMKRSARWLQEFNGA 407
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 553 YFARLEVVEAYSPAPQLIMQCS 618
>gb|CX616148.1|CX616148 GABR1_26_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_26_D10_A002 3', mRNA sequence
Length = 662
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +3
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 84 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 263
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 264 CERTMKRSARWLQEFNGA 317
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 463 YFARLEVVEAYSPAPQLIMQCS 528
>gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 690
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +3
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 171 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 350
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 351 CERTMKRSARWLQEFNGA 404
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 550 YFARLEVVEAYSPAPQLIMQCS 615
>gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_13_C10_A002 3', mRNA sequence
Length = 732
Score = 93.6 bits (198), Expect(2) = 2e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +3
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 234 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 413
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 414 CERTMKRSARWLQEFNGA 467
Score = 34.5 bits (69), Expect(2) = 2e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 613 YFARLEVVEAYSPAPQLIMQCS 678
>gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_14_E02_A002 3', mRNA sequence
Length = 732
Score = 93.6 bits (198), Expect(2) = 2e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +3
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 234 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 413
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 414 CERTMKRSARWLQEFNGA 467
Score = 34.5 bits (69), Expect(2) = 2e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 613 YFARLEVVEAYSPAPQLIMQCS 678
>gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_D08_A002 3', mRNA sequence
Length = 840
Score = 93.6 bits (198), Expect(2) = 2e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +3
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 342 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 521
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 522 CERTMKRSARWLQEFNGA 575
Score = 34.5 bits (69), Expect(2) = 2e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 721 YFARLEVVEAYSPAPQLIMQCS 786
>gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nuclear gene encoding chloroplast
protein, complete cds
Length = 1983
Score = 93.6 bits (198), Expect(2) = 4e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +2
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 1481 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 1660
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 1661 CERTMKRSARWLQEFNGA 1714
Score = 34.5 bits (69), Expect(2) = 4e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +3
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 1860 YFARLEVVEAYSPAPQLIMQCS 1925
>gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 685
Score = 93.6 bits (198), Expect(2) = 5e-022
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR
Sbjct: 241 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENG 420
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 421 CERTMKRSARWLQEFNGA 474
Score = 32.7 bits (65), Expect(2) = 5e-022
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 121 FFPPXEVXEAYSPAPWLITHC 59
+F EV EAYSPAP LI C
Sbjct: 620 YFARLEVVEAYSPAPQLIMQC 682
>gb|BF586059.1|BF586059 FM1_26_B07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 590
Score = 93.2 bits (197), Expect(2) = 6e-022
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = -3 / +1
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G Y+DR
Sbjct: 94 ALEDHTRXDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYIDRENG 273
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 274 CERTMKRSARWLQEFNGA 327
Score = 32.7 bits (65), Expect(2) = 6e-022
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +3
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 477 YFARLEVVEAYSPAPQLIM*CS 542
>gb|CF430559.1|CF430559 NIT1_3_G08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_3_G08_A002 3', mRNA sequence
Length = 588
Score = 90.4 bits (191), Expect(2) = 1e-021
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = -3 / +2
Query: 464 ALNXYKXXDXIXXHIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXX 285
AL + D I H+ K+S G++V+ FAW DNFEW +G+TER+G YV R
Sbjct: 89 ALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVGRENG 268
Query: 284 CTXYMKEXAKWLKQFNAA 231
C MK A+WL++FN A
Sbjct: 269 CERTMKRSARWLQEFNGA 322
Score = 34.5 bits (69), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +3
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 468 YFARLEVVEAYSPAPQLIMQCS 533
>gb|AW922651.1|AW922651 DG1_20_B09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 87.7 bits (185), Expect(2) = 5e-021
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -3 / +2
Query: 425 HIXXXKESXXXGSNVQXXFAWXXXDNFEWFAGFTERYGXXYVDRNXXCTXYMKEXAKWLK 246
H+ K+S G++V+ FAW DNFEW +G+TER+G YVDR C MK A+WL+
Sbjct: 8 HLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQ 187
Query: 245 QFNAA 231
+FN A
Sbjct: 188 EFNGA 202
Score = 34.5 bits (69), Expect(2) = 5e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / +3
Query: 121 FFPPXEVXEAYSPAPWLITHCS 56
+F EV EAYSPAP LI CS
Sbjct: 348 YFARLEVVEAYSPAPQLIMQCS 413
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 421,873,467
Number of Sequences: 832831
Number of extensions: 4494213
Number of successful extensions: 44057
Number of sequences better than 1.0e-020: 21
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 14716521099
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)