TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.064D08F020918.3.1
(559 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW406102.1|CW406102 fsbb001f098p11k0 Sorghum methylation... 114 6e-043
gb|CW261541.1|CW261541 104_728_11229568_116_35175_052 Sorgh... 114 6e-027
gb|CW261542.1|CW261542 104_728_11229568_148_35171_052 Sorgh... 81 1e-025
gb|CD227025.1|CD227025 CCC1_49_D01.g1_A007 Callus culture/c... 115 5e-025
gb|CX614690.1|CX614690 GABR1_15_E05.g1_A002 GA- or brassino... 111 6e-024
gb|CD429993.1|CD429993 ETH1_16_D05.g1_A002 Ethylene-treated... 111 1e-023
gb|CN144878.1|CN144878 WOUND1_25_B02.g1_A002 Wounded leaves... 111 1e-023
gb|CN145216.1|CN145216 WOUND1_27_B08.g1_A002 Wounded leaves... 111 1e-023
gb|CX622730.1|CX622730 GABR1_65_D10.g1_A002 GA- or brassino... 111 1e-023
gb|CX620427.1|CX620427 GABR1_51_F11.g1_A002 GA- or brassino... 110 2e-023
gb|CD209432.1|CD209432 HS1_42_C05.g1_A012 Heat-shocked seed... 110 2e-023
gb|CW207012.1|CW207012 104_636_11187890_148_36968_015 Sorgh... 109 4e-023
gb|CF428820.1|CF428820 PH1_17_E04.g1_A002 Phosphorous-defic... 109 4e-023
gb|CB927439.1|CB927439 ABA1_25_G04.g1_A012 Abscisic acid-tr... 108 5e-023
gb|CD219565.1|CD219565 CCC1_57_B10.g1_A007 Callus culture/c... 108 5e-023
gb|CW488464.1|CW488464 fsbb001f254o02k0 Sorghum methylation... 107 1e-022
gb|CL157022.1|CL157022 104_344_10783261_116_31374_205 Sorgh... 107 1e-022
gb|CW290719.1|CW290719 104_770_11413166_116_35566_061 Sorgh... 107 1e-022
gb|CW273831.1|CW273831 104_746_11404109_148_35368_023 Sorgh... 104 9e-022
gb|CW217349.1|CW217349 104_650_11195609_116_37133_071 Sorgh... 99 5e-020
gb|CB927712.1|CB927712 ABA1_27_C05.g1_A012 Abscisic acid-tr... 79 8e-020
gb|CW065423.1|CW065423 104_312_10523140_114_30135 Sorghum m... 97 2e-019
gb|CD222393.1|CD222393 CCC1_21_D01.g1_A007 Callus culture/c... 59 5e-019
gb|CW087009.1|CW087009 104_431_10947347_114_33026_044 Sorgh... 88 1e-018
gb|CW387429.1|CW387429 fsbb001f071m07f0 Sorghum methylation... 94 2e-018
gb|CW072209.1|CW072209 104_325_10592132_114_30536 Sorghum m... 94 2e-018
gb|CW494840.1|CW494840 fsbb001f286f08f0 Sorghum methylation... 93 4e-018
gb|BM325645.1|BM325645 PIC1_47_A12.b1_A002 Pathogen-infecte... 92 7e-018
gb|CW083983.1|CW083983 104_426_10945501_116_32438_055 Sorgh... 65 4e-017
gb|CW124122.1|CW124122 104_503_11111597_148_34693_019 Sorgh... 68 4e-016
gb|CL175915.1|CL175915 104_381_10892781_116_31765_381 Sorgh... 85 6e-016
gb|CW198914.1|CW198914 104_623_11183229_148_37057_083 Sorgh... 85 6e-016
gb|CW396397.1|CW396397 fsbb001f084n04k0 Sorghum methylation... 85 6e-016
gb|CL148845.1|CL148845 104_329_10593371_148_31784_111 Sorgh... 59 8e-016
gb|CW300131.1|CW300131 104_783_11463487_148_36250_026 Sorgh... 60 2e-015
gb|BG560480.1|BG560480 RHIZ2_74_H08.b1_A003 Rhizome2 (RHIZ2... 82 7e-015
gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots ... 64 1e-014
gb|CW257463.1|CW257463 104_723_11227348_116_35159_016 Sorgh... 67 2e-014
gb|CW423560.1|CW423560 fsbb001f133g23k0 Sorghum methylation... 67 2e-014
gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots ... 64 2e-014
gb|CW083982.1|CW083982 104_426_10945501_114_32374_055 Sorgh... 65 3e-014
gb|CW289076.1|CW289076 104_767_11412286_116_35544_083 Sorgh... 79 4e-014
gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots ... 65 9e-014
gb|CL175916.1|CL175916 104_381_10892781_148_31764_381 Sorgh... 77 2e-013
gb|CL175352.1|CL175352 104_380_10892386_148_31766_370 Sorgh... 77 3e-013
gb|CW247142.1|CW247142 104_708_11221636_116_35018_014 Sorgh... 77 3e-013
gb|CW247143.1|CW247143 104_708_11221636_148_35022_014 Sorgh... 77 3e-013
gb|CW435930.1|CW435930 fsbb001f152f02k0 Sorghum methylation... 77 3e-013
gb|CW041497.1|CW041497 104_275_10506578_114_30284 Sorghum m... 76 5e-013
gb|CL701488.2|CL701488 SP__Ba0073I14.f SP__Ba Sorghum propi... 76 5e-013
gb|AF474129.1| Sorghum bicolor typical P-type R2R3 Myb prot... 61 2e-012
gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassino... 61 4e-012
gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed see... 61 4e-012
gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb prot... 54 4e-012
gb|CW381430.1|CW381430 fsbb001f062n10f0 Sorghum methylation... 72 5e-012
gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorgh... 55 6e-012
gb|AF474132.1| Sorghum bicolor typical P-type R2R3 Myb prot... 61 7e-012
gb|CX617423.1|CX617423 GABR1_33_D11.g1_A002 GA- or brassino... 63 9e-012
gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots S... 55 2e-011
gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/c... 55 2e-011
gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed see... 55 2e-011
gb|CW396930.1|CW396930 fsbb001f085j15k0 Sorghum methylation... 69 4e-011
gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots ... 55 4e-011
gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb prot... 55 5e-011
gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stres... 57 5e-011
gb|CD233716.1|CD233716 SS1_3_E01.g1_A012 Salt-stressed seed... 60 8e-011
gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorgh... 52 8e-011
gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation... 55 8e-011
gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stres... 55 1e-010
gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (L... 55 1e-010
gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1... 55 1e-010
gb|CD210026.1|CD210026 HS1_56_E12.g1_A012 Heat-shocked seed... 53 1e-010
gb|CW037176.1|CW037176 104_268_10504189_115_30382 Sorghum m... 60 1e-010
gb|CW468293.1|CW468293 fsbb001f220g09k0 Sorghum methylation... 68 1e-010
gb|CW221956.1|CW221956 104_657_11202124_116_37451_012 Sorgh... 61 1e-010
gb|CW368034.1|CW368034 fsbb001f041m19f0 Sorghum methylation... 59 2e-010
gb|CW128654.1|CW128654 104_510_11114127_148_34752_058 Sorgh... 67 2e-010
gb|CX617094.1|CX617094 GABR1_31_D12.g1_A002 GA- or brassino... 54 3e-010
gb|CW323228.1|CW323228 104_817_11476519_148_35956_026 Sorgh... 59 3e-010
gb|CW331265.1|CW331265 104_828_11480814_148_36025_023 Sorgh... 59 3e-010
gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stres... 53 3e-010
gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seed... 53 3e-010
gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated... 53 3e-010
gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seed... 53 3e-010
gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated ... 53 3e-010
gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorgh... 56 4e-010
gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation... 56 4e-010
gb|CW331264.1|CW331264 104_828_11480814_116_36026_023 Sorgh... 59 5e-010
gb|CN137174.1|CN137174 OX1_55_D05.g1_A002 Oxidatively-stres... 54 8e-010
gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves... 56 8e-010
gb|CD204532.1|CD204532 HS1_8_E04.g1_A012 Heat-shocked seedl... 65 9e-010
gb|CW172247.1|CW172247 104_583_11156182_148_36535_089 Sorgh... 56 1e-009
gb|CW404241.1|CW404241 fsbb001f096e20f0 Sorghum methylation... 53 1e-009
gb|CW493828.1|CW493828 fsbb001f284m17k0 Sorghum methylation... 56 1e-009
gb|CN135779.1|CN135779 OX1_38_H11.g1_A002 Oxidatively-stres... 53 2e-009
gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves... 51 2e-009
gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-defic... 51 2e-009
gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seed... 51 2e-009
gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/c... 51 2e-009
gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated ... 51 2e-009
gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (L... 51 2e-009
gb|CN129844.1|CN129844 RHOH1_37_F10.g1_A002 Acid- and alkal... 58 3e-009
gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb prot... 58 3e-009
gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorgh... 58 3e-009
gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb prot... 58 3e-009
gb|CW406101.1|CW406101 fsbb001f098p11f0 Sorghum methylation... 62 4e-009
gb|CW374733.1|CW374733 fsbb001f051l23f0 Sorghum methylation... 56 4e-009
gb|CD232590.1|CD232590 SS1_46_D12.g1_A012 Salt-stressed see... 58 4e-009
gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves... 51 4e-009
gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seed... 51 4e-009
gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum m... 42 4e-009
gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb prot... 58 4e-009
gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorgh... 42 4e-009
gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassino... 56 5e-009
gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassino... 56 5e-009
gb|BG159081.1|BG159081 RHIZ2_17_F03.b1_A003 Rhizome2 (RHIZ2... 52 5e-009
gb|CW492389.1|CW492389 fsbb001f282k10k0 Sorghum methylation... 47 7e-009
gb|CW492388.1|CW492388 fsbb001f282k10f0 Sorghum methylation... 47 7e-009
gb|CW172958.1|CW172958 104_584_11156580_148_36547_042 Sorgh... 47 7e-009
gb|CW032214.1|CW032214 104_261_10501251_114_30363 Sorghum m... 61 1e-008
gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (L... 44 1e-008
gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassino... 56 2e-008
gb|CD464139.1|CD464139 ETH1_48_H11.g1_A002 Ethylene-treated... 53 2e-008
gb|AW287502.2|AW287502 LG1_228_H03.b1_A002 Light Grown 1 (L... 60 2e-008
gb|AW671674.1|AW671674 LG1_349_F08.b1_A002 Light Grown 1 (L... 52 2e-008
gb|CW041655.1|CW041655 104_275_10506672_114_30284 Sorghum m... 36 3e-008
gb|CW267925.1|CW267925 104_738_11401002_148_35300_073 Sorgh... 60 3e-008
gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 36 3e-008
gb|CW168642.1|CW168642 104_578_11154251_148_36600_042 Sorgh... 34 5e-008
gb|CW049823.1|CW049823 104_289_10514282_114_30202 Sorghum m... 59 5e-008
gb|CW135304.1|CW135304 104_519_11117773_148_34824_049 Sorgh... 59 5e-008
gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seed... 43 6e-008
gb|CX612627.1|CX612627 GABR1_3_C04.g1_A002 GA- or brassinol... 52 7e-008
gb|CX613554.1|CX613554 GABR1_8_G08.g1_A002 GA- or brassinol... 52 7e-008
gb|CN129172.1|CN129172 RHOH1_33_H11.g1_A002 Acid- and alkal... 41 8e-008
gb|CN129081.1|CN129081 RHOH1_33_H11.b3_A002 Acid- and alkal... 41 8e-008
gb|CW176018.1|CW176018 104_588_11158263_148_36579_052 Sorgh... 41 9e-008
gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation... 34 9e-008
gb|CW496466.1|CW496466 fsbb001f288l19f0 Sorghum methylation... 34 9e-008
gb|CW332828.1|CW332828 104_830_11481620_148_36038_070 Sorgh... 41 1e-007
gb|BZ344526.1|BZ344526 hp66h07.b1 WGS-SbicolorF (JM107 adap... 41 1e-007
gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots ... 51 1e-007
gb|CL180161.1|CL180161 104_389_10895799_116_31908_327 Sorgh... 58 1e-007
gb|CL180162.1|CL180162 104_389_10895799_148_31907_327 Sorgh... 58 1e-007
gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorgh... 58 1e-007
gb|CW287072.1|CW287072 104_765_11411226_116_35524_079 Sorgh... 58 1e-007
gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation... 58 1e-007
gb|BE354970.1|BE354970 DG1_10_C10.b1_A002 Dark Grown 1 (DG1... 49 2e-007
gb|CX623122.1|CX623122 GABR1_67_H01.g1_A002 GA- or brassino... 46 2e-007
gb|CW125665.1|CW125665 104_506_11112463_116_34722_032 Sorgh... 57 2e-007
gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum m... 45 3e-007
gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum m... 56 3e-007
gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorgh... 56 3e-007
gb|CW189094.1|CW189094 104_610_11173783_148_37098_028 Sorgh... 56 5e-007
gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (L... 56 5e-007
gb|CF429061.1|CF429061 PH1_19_D11.g1_A002 Phosphorous-defic... 56 5e-007
gb|CW266762.1|CW266762 104_736_11232607_116_35283_022 Sorgh... 42 5e-007
gb|CW266763.1|CW266763 104_736_11232607_148_35287_022 Sorgh... 42 5e-007
gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stres... 45 5e-007
gb|CW203217.1|CW203217 104_629_11185514_116_36913_003 Sorgh... 42 8e-007
gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Me... 55 1e-006
gb|CL155566.1|CL155566 104_341_10782238_116_31472_334 Sorgh... 54 2e-006
gb|CW170503.1|CW170503 104_580_11155240_116_36516_050 Sorgh... 54 2e-006
gb|CW273830.1|CW273830 104_746_11404109_116_35364_023 Sorgh... 54 2e-006
gb|CW312811.1|CW312811 104_802_11470957_116_35780_049 Sorgh... 54 2e-006
gb|BE357555.1|BE357555 DG1_21_H10.b1_A002 Dark Grown 1 (DG1... 54 2e-006
gb|BE357751.1|BE357751 DG1_22_H09.b1_A002 Dark Grown 1 (DG1... 54 2e-006
gb|CD232287.1|CD232287 SS1_39_B06.g1_A012 Salt-stressed see... 54 2e-006
gb|CF430007.1|CF430007 PH1_25_C07.g1_A002 Phosphorous-defic... 54 2e-006
gb|CN126656.1|CN126656 RHOH1_18_A02.g1_A002 Acid- and alkal... 54 2e-006
gb|CN128796.1|CN128796 RHOH1_31_D08.g1_A002 Acid- and alkal... 54 2e-006
gb|CN141027.1|CN141027 OX1_48_H05.g1_A002 Oxidatively-stres... 54 2e-006
gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation... 54 2e-006
gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2... 42 2e-006
gb|BG947473.1|BG947473 IP1_4_H01.b1_A002 Immature pannicle ... 46 3e-006
gb|CD204206.1|CD204206 HS1_4_C12.g1_A012 Heat-shocked seedl... 53 3e-006
gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorgh... 32 3e-006
gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorgh... 32 4e-006
gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorgh... 32 4e-006
gb|CW154933.1|CW154933 104_557_11145867_148_36360_012 Sorgh... 42 5e-006
gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorgh... 37 5e-006
gb|AW287632.2|AW287632 LG1_244_E07.b1_A002 Light Grown 1 (L... 52 5e-006
gb|BE595825.1|BE595825 PI1_54_E12.b1_A002 Pathogen induced ... 52 5e-006
gb|CN148046.1|CN148046 WOUND1_53_H06.g1_A002 Wounded leaves... 52 5e-006
gb|CX606768.1|CX606768 ANR1_4_H01.g1_A002 Anaerobic roots S... 52 5e-006
gb|CX621203.1|CX621203 GABR1_56_E01.g1_A002 GA- or brassino... 41 6e-006
gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorgh... 34 9e-006
gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorgh... 42 1e-005
gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorgh... 42 1e-005
gb|CL157655.1|CL157655 104_345_10783756_114_31477_316 Sorgh... 51 1e-005
gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG... 51 1e-005
gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG... 51 1e-005
gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorgh... 34 1e-005
gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation... 34 1e-005
gb|CW457158.1|CW457158 fsbb001f202n15f0 Sorghum methylation... 36 1e-005
gb|CW347756.1|CW347756 fsbb001f007m23f0 Sorghum methylation... 36 2e-005
gb|CW198757.1|CW198757 104_623_11183144_148_36842_022 Sorgh... 51 2e-005
gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation... 36 2e-005
gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation... 31 2e-005
gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation... 36 3e-005
gb|CW345225.1|CW345225 104_848_11488373_148_36206_027 Sorgh... 50 3e-005
gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorgh... 36 3e-005
gb|CW090149.1|CW090149 104_435_10949116_116_32599_002 Sorgh... 35 3e-005
gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorgh... 31 3e-005
gb|CW288510.1|CW288510 104_767_11411990_148_35540_063 Sorgh... 36 3e-005
gb|CW440051.1|CW440051 fsbb001f158i03k0 Sorghum methylation... 36 3e-005
gb|CW440141.1|CW440141 fsbb001f158k07k0 Sorghum methylation... 36 3e-005
gb|CW057979.1|CW057979 104_300_10518502_1_30028 Sorghum met... 36 3e-005
gb|CD211312.1|CD211312 HS1_59_F02.g1_A012 Heat-shocked seed... 50 4e-005
gb|CW257497.1|CW257497 104_723_11227368_116_35159_096 Sorgh... 32 4e-005
gb|BZ330053.1|BZ330053 hv89f07.g1 WGS-SbicolorF (JM107 adap... 35 4e-005
gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum met... 36 4e-005
gb|CW047730.1|CW047730 104_285_10512861_115_30217 Sorghum m... 36 4e-005
gb|BE594416.1|BE594416 PI1_33_B09.b1_A002 Pathogen induced ... 41 4e-005
gb|CW136796.1|CW136796 104_521_11118569_116_34846_065 Sorgh... 42 5e-005
gb|CW157627.1|CW157627 104_561_11147625_148_36388_045 Sorgh... 37 5e-005
gb|CW254409.1|CW254409 104_718_11225650_148_35117_039 Sorgh... 49 5e-005
gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorgh... 35 6e-005
gb|AF470061.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 35 6e-005
gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorgh... 35 6e-005
gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 31 7e-005
gb|AY860968.1| Sorghum bicolor yellow seed1 (y1) gene, y1-r... 37 7e-005
gb|CW389572.1|CW389572 fsbb001f074n05f0 Sorghum methylation... 35 7e-005
gb|CW433017.1|CW433017 fsbb001f148a21k0 Sorghum methylation... 33 8e-005
gb|CL179208.1|CL179208 104_388_10895151_148_31909_063 Sorgh... 33 8e-005
gb|CW283725.1|CW283725 104_760_11409398_148_35488_059 Sorgh... 36 8e-005
gb|CW389570.1|CW389570 fsbb001f074n04f0 Sorghum methylation... 34 9e-005
gb|CW306377.1|CW306377 104_792_11466808_148_35716_064 Sorgh... 35 9e-005
gb|CW406582.1|CW406582 fsbb001f099k13k0 Sorghum methylation... 48 1e-004
gb|BF481215.1|BF481215 FM1_17_A03.b1_A003 Floral-Induced Me... 34 1e-004
gb|AF470063.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 33 1e-004
gb|CW408645.1|CW408645 fsbb001f102j23k0 Sorghum methylation... 34 1e-004
gb|CW218707.1|CW218707 104_652_11196333_116_37460_089 Sorgh... 34 1e-004
gb|CW161765.1|CW161765 104_568_11150585_148_36434_067 Sorgh... 33 1e-004
gb|CW408644.1|CW408644 fsbb001f102j23f0 Sorghum methylation... 34 1e-004
gb|CW172701.1|CW172701 104_584_11156431_148_36546_032 Sorgh... 34 1e-004
gb|CW260485.1|CW260485 104_727_11228990_148_35200_059 Sorgh... 34 1e-004
gb|CW247980.1|CW247980 104_709_11222049_148_35027_045 Sorgh... 34 2e-004
gb|CW189916.1|CW189916 104_611_11174220_116_36748_042 Sorgh... 47 2e-004
gb|CF074455.1|CF074455 FE1_24_A11.g1_A002 Iron-deficient se... 34 2e-004
gb|CW187951.1|CW187951 104_607_11172759_116_36725_056 Sorgh... 47 2e-004
gb|CW427204.1|CW427204 fsbb001f139b08k0 Sorghum methylation... 29 4e-004
gb|CX618593.1|CX618593 GABR1_40_B10.g1_A002 GA- or brassino... 34 4e-004
gb|CW347400.1|CW347400 fsbb001f007e18f0 Sorghum methylation... 32 4e-004
gb|CW283724.1|CW283724 104_760_11409398_116_35484_059 Sorgh... 33 4e-004
gb|CW051793.1|CW051793 104_292_10515365_114_30189 Sorghum m... 32 5e-004
gb|CW209992.1|CW209992 104_640_11189556_116_37000_044 Sorgh... 33 5e-004
gb|CW174572.1|CW174572 104_586_11157479_116_36558_084 Sorgh... 46 6e-004
gb|CW419931.1|CW419931 fsbb001f126a07k0 Sorghum methylation... 32 6e-004
gb|CW203051.1|CW203051 104_629_11185423_148_36910_024 Sorgh... 32 6e-004
gb|CW347401.1|CW347401 fsbb001f007e18k0 Sorghum methylation... 32 6e-004
gb|CW176930.1|CW176930 104_590_11158749_116_36594_095 Sorgh... 32 7e-004
gb|CW219776.1|CW219776 104_654_11196977_148_37146_077 Sorgh... 32 7e-004
gb|CW265473.1|CW265473 104_734_11231898_148_35264_067 Sorgh... 33 8e-004
gb|CW377249.1|CW377249 fsbb001f055h19f0 Sorghum methylation... 34 9e-004
gb|CW039028.1|CW039028 104_271_10505257_114_30387 Sorghum m... 34 9e-004
gb|CW026709.1|CW026709 104_252_10498105_116_30520 Sorghum m... 38 9e-004
gb|CW258064.1|CW258064 104_723_11227672_116_35161_052 Sorgh... 38 9e-004
gb|CW128216.1|CW128216 104_509_11113884_148_34749_036 Sorgh... 32 9e-004
gb|CW143178.1|CW143178 104_534_11137274_116_34951_001 Sorgh... 34 0.001
gb|AF466199.1| Sorghum bicolor putative receptor protein ki... 34 0.001
gb|AC152913.1| Sorghum bicolor clone SB106M24, *** SEQUENCI... 45 0.001
gb|CW316411.1|CW316411 104_807_11472880_148_35845_050 Sorgh... 32 0.001
gb|CW261147.1|CW261147 104_728_11229348_148_35173_046 Sorgh... 32 0.001
gb|CW440966.1|CW440966 fsbb001f159n24k0 Sorghum methylation... 37 0.001
gb|CW034132.1|CW034132 104_264_10502369_115_30380 Sorghum m... 37 0.001
gb|CW114914.1|CW114914 104_489_11106252_148_34566_034 Sorgh... 32 0.001
gb|CW133943.1|CW133943 104_517_11117035_148_34814_066 Sorgh... 35 0.001
gb|AF470071.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 33 0.001
gb|CW164019.1|CW164019 104_571_11151764_116_36456_066 Sorgh... 44 0.001
gb|CW189730.1|CW189730 104_611_11174119_116_36745_030 Sorgh... 44 0.001
gb|CW189732.1|CW189732 104_611_11174120_116_36748_030 Sorgh... 44 0.001
gb|CW277067.1|CW277067 104_751_11405824_148_35414_064 Sorgh... 44 0.001
gb|CW426158.1|CW426158 fsbb001f137g15f0 Sorghum methylation... 44 0.001
gb|CN129764.1|CN129764 RHOH1_37_F10.b1_A002 Acid- and alkal... 44 0.001
gb|AF474128.1| Sorghum bicolor typical P-type R2R3 Myb prot... 35 0.001
gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 29 0.001
gb|AF470059.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 31 0.001
gb|CW029941.1|CW029941 104_257_10499963_114_30401 Sorghum m... 32 0.002
gb|CW029942.1|CW029942 104_257_10499964_114_30401 Sorghum m... 32 0.002
gb|CW073845.1|CW073845 104_340_10781847_116_31470_327 Sorgh... 32 0.002
gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation... 28 0.002
gb|CW221823.1|CW221823 104_657_11202052_148_37449_014 Sorgh... 31 0.002
gb|CW458259.1|CW458259 fsbb001f204h09f0 Sorghum methylation... 32 0.002
gb|CW215123.1|CW215123 104_647_11194377_116_37161_041 Sorgh... 32 0.002
gb|CW449861.1|CW449861 fsbb001f188d08k0 Sorghum methylation... 40 0.002
gb|CW156799.1|CW156799 104_559_11146883_148_36376_034 Sorgh... 44 0.002
gb|CW224387.1|CW224387 104_660_11203419_116_37197_006 Sorgh... 44 0.002
gb|CW028250.1|CW028250 104_255_10498984_114_30394 Sorghum m... 35 0.002
gb|CW450438.1|CW450438 fsbb001f189b06k0 Sorghum methylation... 31 0.002
gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorgh... 33 0.002
gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation... 33 0.002
gb|CW257715.1|CW257715 104_723_11227485_116_35160_091 Sorgh... 34 0.002
gb|CW378977.1|CW378977 fsbb001f057p23k0 Sorghum methylation... 34 0.002
gb|CW364381.1|CW364381 fsbb001f036g09k0 Sorghum methylation... 34 0.002
gb|CW311532.1|CW311532 104_801_11470281_148_36278_045 Sorgh... 43 0.003
gb|BF656165.1|BF656165 FM1_43_G09.b1_A003 Floral-Induced Me... 43 0.003
gb|BZ336394.1|BZ336394 hz34a02.g1 WGS-SbicolorF (JM107 adap... 36 0.003
gb|CW275699.1|CW275699 104_749_11405100_148_35391_046 Sorgh... 43 0.004
gb|CW330388.1|CW330388 104_827_11480347_148_36008_076 Sorgh... 43 0.004
gb|CW150395.1|CW150395 104_549_11143002_148_36305_067 Sorgh... 37 0.004
gb|CW052419.1|CW052419 104_292_10515541_114_30188 Sorghum m... 36 0.004
gb|CW052420.1|CW052420 104_292_10515541_114_30286 Sorghum m... 36 0.005
gb|CL158615.1|CL158615 104_347_10803661_114_31377_253 Sorgh... 32 0.005
gb|BE598105.1|BE598105 PI1_65_G07.b1_A002 Pathogen induced ... 42 0.005
gb|BG487550.1|BG487550 EM1_67_D06.b1_A002 Embryo 1 (EM1) So... 42 0.005
gb|BG739490.1|BG739490 EM1_81_E12.b1_A002 Embryo 1 (EM1) So... 42 0.005
gb|BI643589.1|BI643589 DG1_90_A02.b1_A002 Dark Grown 1 (DG1... 42 0.005
gb|CD206135.1|CD206135 HS1_20_E11.g1_A012 Heat-shocked seed... 42 0.005
gb|CD207002.1|CD207002 HS1_26_H01.g1_A012 Heat-shocked seed... 42 0.005
gb|CD462971.1|CD462971 ETH1_41_H04.g1_A002 Ethylene-treated... 42 0.005
gb|CF755877.1|CF755877 DSAF1_2_A05.b1_A011 Drought-stressed... 42 0.005
gb|CW392901.1|CW392901 fsbb001f079l18k0 Sorghum methylation... 30 0.005
gb|CW283140.1|CW283140 104_759_11409088_148_35474_056 Sorgh... 37 0.005
gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorgh... 33 0.005
gb|CW415564.1|CW415564 fsbb001f115l16f0 Sorghum methylation... 33 0.005
gb|CW501261.1|CW501261 fsbb001f296p22k0 Sorghum methylation... 33 0.005
gb|CW219513.1|CW219513 104_653_11196814_116_37144_085 Sorgh... 36 0.006
gb|CW317456.1|CW317456 104_809_11473423_116_35861_028 Sorgh... 42 0.007
gb|CW416033.1|CW416033 fsbb001f116g11k0 Sorghum methylation... 42 0.007
gb|CW490483.1|CW490483 fsbb001f275o24f0 Sorghum methylation... 42 0.007
gb|AW744868.1|AW744868 LG1_385_C06.b1_A002 Light Grown 1 (L... 42 0.007
gb|BG104097.1|BG104097 RHIZ2_40_E04.b1_A003 Rhizome2 (RHIZ2... 42 0.007
gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle... 42 0.007
gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle... 42 0.007
gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle... 42 0.007
gb|CN127235.1|CN127235 RHOH1_21_G04.g3_A002 Acid- and alkal... 42 0.007
gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorgh... 33 0.007
gb|CW080152.1|CW080152 104_407_10905722_116_32482_005 Sorgh... 33 0.008
gb|CW202832.1|CW202832 104_629_11185306_116_36915_043 Sorgh... 33 0.009
gb|BZ341015.1|BZ341015 ic42e09.g1 WGS-SbicolorF (JM107 adap... 34 0.009
gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorgh... 33 0.009
gb|BZ330036.1|BZ330036 hv89e09.g1 WGS-SbicolorF (JM107 adap... 42 0.010
gb|BZ626317.1|BZ626317 ih45a10.b1 WGS-SbicolorF (DH5a methy... 42 0.010
gb|CW026395.1|CW026395 104_252_10497922_114_30511 Sorghum m... 42 0.010
gb|CW465524.1|CW465524 fsbb001f216f08k0 Sorghum methylation... 42 0.010
gb|CW159747.1|CW159747 104_566_11149518_148_36426_031 Sorgh... 34 0.010
gb|BZ424048.1|BZ424048 id56d03.g1 WGS-SbicolorF (DH5a methy... 33 0.011
gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb prot... 29 0.012
gb|CW414654.1|CW414654 fsbb001f114g17k0 Sorghum methylation... 31 0.013
gb|CW188222.1|CW188222 104_608_11172914_148_36731_015 Sorgh... 41 0.013
gb|CW305036.1|CW305036 104_790_11466103_148_36061_028 Sorgh... 41 0.013
gb|AW924206.1|AW924206 WS1_51_E10.b1_A002 Water-stressed 1 ... 41 0.013
gb|BG560610.1|BG560610 RHIZ2_59_E07.b1_A003 Rhizome2 (RHIZ2... 41 0.013
gb|CB925655.1|CB925655 ABA1_22_B01.g1_A012 Abscisic acid-tr... 41 0.013
gb|CD221310.1|CD221310 CCC1_74_E09.g1_A007 Callus culture/c... 41 0.013
gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated... 41 0.013
gb|CW115795.1|CW115795 104_491_11106754_148_34597_045 Sorgh... 36 0.015
gb|BZ368203.1|BZ368203 id12a02.b1 WGS-SbicolorF (JM107 adap... 30 0.015
gb|BG273523.1|BG273523 OV2_26_G06.b1_A002 Ovary 2 (OV2) Sor... 30 0.015
gb|CW395581.1|CW395581 fsbb001f083k18f0 Sorghum methylation... 32 0.017
gb|CW186390.1|CW186390 104_604_11166541_148_36706_057 Sorgh... 32 0.017
gb|CW459699.1|CW459699 fsbb001f206j01k0 Sorghum methylation... 41 0.018
gb|CW218568.1|CW218568 104_652_11196258_148_37530_075 Sorgh... 31 0.018
gb|AF470066.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 33 0.019
gb|CW148312.1|CW148312 104_542_11140354_116_35003_033 Sorgh... 30 0.024
gb|CW140879.1|CW140879 104_531_11136014_116_34925_053 Sorgh... 30 0.026
gb|CW385435.1|CW385435 fsbb001f068o16k0 Sorghum methylation... 32 0.027
gb|CW493827.1|CW493827 fsbb001f284m17f0 Sorghum methylation... 31 0.027
gb|CW218565.1|CW218565 104_652_11196257_116_37528_075 Sorgh... 40 0.033
gb|CW218566.1|CW218566 104_652_11196257_148_37529_075 Sorgh... 40 0.033
gb|CW300130.1|CW300130 104_783_11463487_116_36249_026 Sorgh... 40 0.033
gb|BG357327.1|BG357327 OV2_12_E06.b1_A002 Ovary 2 (OV2) Sor... 40 0.033
gb|BM326363.1|BM326363 PIC1_56_B08.b1_A002 Pathogen-infecte... 40 0.033
gb|CB925914.1|CB925914 ABA1_30_C04.g1_A012 Abscisic acid-tr... 40 0.033
gb|CF484032.1|CF484032 POL1_2_E05.g1_A002 Pollen Sorghum bi... 40 0.033
gb|CN146348.1|CN146348 WOUND1_39_E08.g1_A002 Wounded leaves... 40 0.033
gb|CL170725.1|CL170725 104_371_10814024_116_31791_344 Sorgh... 39 0.045
gb|CW105868.1|CW105868 104_475_11013109_116_34456_059 Sorgh... 39 0.045
gb|CW130844.1|CW130844 104_513_11115341_148_34778_023 Sorgh... 39 0.045
gb|CW149663.1|CW149663 104_548_11142613_148_36290_051 Sorgh... 39 0.045
gb|CW364997.1|CW364997 fsbb001f037f01f0 Sorghum methylation... 33 0.053
gb|CW034730.1|CW034730 104_265_10502732_114_30378 Sorghum m... 31 0.058
gb|CW189791.1|CW189791 104_611_11174152_148_36751_062 Sorgh... 35 0.072
gb|CW344541.1|CW344541 104_847_11488007_148_36198_092 Sorgh... 29 0.072
gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorgh... 29 0.075
gb|CL153544.1|CL153544 104_338_10780786_114_31369_034 Sorgh... 38 0.084
gb|BG947947.1|BG947947 IP1_7_E02.b1_A002 Immature pannicle ... 38 0.084
gb|CW217448.1|CW217448 104_650_11195661_116_37133_085 Sorgh... 30 0.13
gb|CW042795.1|CW042795 104_276_10507284_116_30487 Sorghum m... 32 0.14
gb|CX618620.1|CX618620 GABR1_40_E04.g1_A002 GA- or brassino... 31 0.15
gb|CX611803.1|CX611803 ANR1_26_G05.g1_A002 Anaerobic roots ... 31 0.15
gb|CX611421.1|CX611421 ANR1_24_C04.g1_A002 Anaerobic roots ... 31 0.15
gb|CW067815.1|CW067815 104_315_10524545_114_30124 Sorghum m... 37 0.19
gb|CW232854.1|CW232854 104_685_11213042_148_37363_003 Sorgh... 37 0.19
gb|CW368840.1|CW368840 fsbb001f042p19f0 Sorghum methylation... 37 0.19
gb|CW122683.1|CW122683 104_501_11110806_116_34678_019 Sorgh... 37 0.21
gb|CW171329.1|CW171329 104_582_11155681_116_36525_013 Sorgh... 31 0.24
gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorgh... 28 0.28
gb|CW454633.1|CW454633 fsbb001f199c24k0 Sorghum methylation... 31 0.28
gb|CW184783.1|CW184783 104_602_11165720_148_36691_028 Sorgh... 37 0.29
gb|CW367822.1|CW367822 fsbb001f041h14f0 Sorghum methylation... 37 0.29
gb|CW383265.1|CW383265 fsbb001f065k21f0 Sorghum methylation... 37 0.29
gb|BG048427.1|BG048427 OV1_13_B11.g1_A002 Ovary 1 (OV1) Sor... 37 0.29
gb|CW491649.1|CW491649 fsbb001f281j16k0 Sorghum methylation... 32 0.32
gb|CL173222.1|CL173222 104_376_10890727_116_31795_247 Sorgh... 31 0.33
gb|CL181103.1|CL181103 104_391_10896516_148_31927_276 Sorgh... 36 0.40
gb|CW435846.1|CW435846 fsbb001f152d02k0 Sorghum methylation... 36 0.40
gb|CW494877.1|CW494877 fsbb001f286g06k0 Sorghum methylation... 36 0.40
gb|CL180232.1|CL180232 104_389_10895849_116_31908_377 Sorgh... 29 0.48
gb|CW367823.1|CW367823 fsbb001f041h14k0 Sorghum methylation... 30 0.53
gb|CW160735.1|CW160735 104_567_11150041_148_36417_009 Sorgh... 36 0.54
gb|CW190322.1|CW190322 104_611_11174442_148_36751_065 Sorgh... 36 0.54
gb|CW299162.1|CW299162 104_782_11462968_116_35690_064 Sorgh... 36 0.54
gb|CW334684.1|CW334684 104_833_11482629_116_36070_091 Sorgh... 36 0.54
gb|CW334685.1|CW334685 104_833_11482629_148_36071_091 Sorgh... 36 0.54
gb|CW424447.1|CW424447 fsbb001f134m17k0 Sorghum methylation... 36 0.54
gb|CW433950.1|CW433950 fsbb001f149g16k0 Sorghum methylation... 36 0.54
gb|CW452260.1|CW452260 fsbb001f192l08k0 Sorghum methylation... 36 0.54
gb|CW498593.1|CW498593 fsbb001f291o11f0 Sorghum methylation... 36 0.54
gb|CD228121.1|CD228121 CCC1_5_A11.g1_A007 Callus culture/ce... 36 0.54
gb|CD429101.1|CD429101 ETH1_2_B09.g1_A002 Ethylene-treated ... 36 0.54
gb|CW364998.1|CW364998 fsbb001f037f01k0 Sorghum methylation... 29 0.59
gb|CD228345.1|CD228345 CCC1_7_E08.b1_A007 Callus culture/ce... 35 0.66
gb|BZ331621.1|BZ331621 hw10f10.g1 WGS-SbicolorF (JM107 adap... 29 0.67
gb|CW118976.1|CW118976 104_495_11108502_116_34625_019 Sorgh... 29 0.67
gb|BZ412961.1|BZ412961 49a9_R_09 Subclones from BAC clones ... 35 0.74
gb|CW377224.1|CW377224 fsbb001f055h06k0 Sorghum methylation... 35 0.74
gb|CW475284.1|CW475284 fsbb001f231j04k0 Sorghum methylation... 35 0.74
gb|CW442236.1|CW442236 fsbb001f161m20k0 Sorghum methylation... 29 0.80
gb|AF320112.1|AF320112 Sorghum bicolor Myb1-like protein ge... 27 0.85
gb|AI724885.1|AI724885 RHIZ1_30_G05.y3_A001 Rhizome1 (RHIZ1... 34 0.91
gb|AW286606.1|AW286606 LG1_335_A03.g1_A002 Light Grown 1 (L... 34 0.91
gb|AW286654.1|AW286654 LG1_335_F02.g1_A002 Light Grown 1 (L... 34 0.91
gb|AW282909.2|AW282909 LG1_304_F11.g1_A002 Light Grown 1 (L... 34 0.91
gb|AW745540.1|AW745540 WS1_35_D02.g1_A002 Water-stressed 1 ... 34 0.91
gb|AW747099.1|AW747099 WS1_65_D04.g1_A002 Water-stressed 1 ... 34 0.91
gb|AW923737.1|AW923737 DG1_58_H04.g1_A002 Dark Grown 1 (DG1... 34 0.91
gb|BE356529.1|BE356529 DG1_125_A03.g1_A002 Dark Grown 1 (DG... 34 0.91
gb|BE361006.1|BE361006 DG1_68_G02.g1_A002 Dark Grown 1 (DG1... 34 0.91
gb|BE362117.1|BE362117 DG1_84_A02.g1_A002 Dark Grown 1 (DG1... 34 0.91
gb|BE593956.1|BE593956 WS1_104_D12.g1_A002 Water-stressed 1... 34 0.91
gb|BE596032.1|BE596032 PI1_51_E01.g1_A002 Pathogen induced ... 34 0.91
gb|BE598416.1|BE598416 PI1_82_G10.g1_A002 Pathogen induced ... 34 0.91
gb|BE599301.1|BE599301 PI1_87_G11.g1_A002 Pathogen induced ... 34 0.91
gb|BG047911.1|BG047911 OV1_25_D01.g1_A002 Ovary 1 (OV1) Sor... 34 0.91
gb|BG048056.1|BG048056 OV1_27_A12.g1_A002 Ovary 1 (OV1) Sor... 34 0.91
gb|BG158199.1|BG158199 EM1_11_E04.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BG240751.1|BG240751 OV1_37_G11.g1_A002 Ovary 1 (OV1) Sor... 34 0.91
gb|BG240769.1|BG240769 OV1_38_A08.g1_A002 Ovary 1 (OV1) Sor... 34 0.91
gb|BG240894.1|BG240894 OV1_39_F01.g1_A002 Ovary 1 (OV1) Sor... 34 0.91
gb|BG356598.1|BG356598 EM1_24_E08.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BG356632.1|BG356632 EM1_24_H09.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BG357386.1|BG357386 OV2_29_C04.g1_A002 Ovary 2 (OV2) Sor... 34 0.91
gb|BG410899.1|BG410899 EM1_27_C10.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BG462867.1|BG462867 EM1_45_F03.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BG463701.1|BG463701 EM1_50_H08.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BG465218.1|BG465218 EM1_73_C07.g1_A002 Embryo 1 (EM1) So... 34 0.91
gb|BI098623.1|BI098623 IP1_34_H06.g1_A002 Immature pannicle... 34 0.91
gb|BI098624.1|BI098624 IP1_34_H07.g1_A002 Immature pannicle... 34 0.91
gb|BM318510.1|BM318510 PI1_14_D11.b9_A002 Pathogen induced ... 34 0.91
gb|BM329446.1|BM329446 PIC1_38_A10.g1_A002 Pathogen-infecte... 34 0.91
gb|BM329876.1|BM329876 PIC1_44_D02.g1_A002 Pathogen-infecte... 34 0.91
gb|CD220557.1|CD220557 CCC1_68_C04.b1_A007 Callus culture/c... 34 0.91
gb|CD223972.1|CD223972 CCC1_31_H03.b1_A007 Callus culture/c... 34 0.91
gb|CF072811.1|CF072811 FE1_26_D01.b1_A002 Iron-deficient se... 34 0.91
gb|CF073109.1|CF073109 FE1_28_B12.b1_A002 Iron-deficient se... 34 0.91
gb|CF487214.1|CF487214 POL1_42_A10.g1_A002 Pollen Sorghum b... 34 0.91
gb|CF487311.1|CF487311 POL1_43_B08.b1_A002 Pollen Sorghum b... 34 0.91
gb|DN552535.1|DN552535 pSHR-RT-A-H1_B09_C336 pSHR Sorghum h... 34 0.91
emb|X57663.1|SVGLYRNA1 S. vulgare mRNA for glycine-rich RNA... 34 0.91
gb|CW299425.1|CW299425 104_782_11463106_148_35687_041 Sorgh... 35 1.0
gb|CW306376.1|CW306376 104_792_11466808_116_35712_064 Sorgh... 35 1.0
gb|CW389573.1|CW389573 fsbb001f074n05k0 Sorghum methylation... 35 1.0
gb|CW449377.1|CW449377 fsbb001f183h24f0 Sorghum methylation... 35 1.0
gb|BG356328.1|BG356328 EM1_21_B10.g1_A002 Embryo 1 (EM1) So... 35 1.0
gb|BG410798.1|BG410798 EM1_26_B01.g1_A002 Embryo 1 (EM1) So... 35 1.0
gb|BG463129.1|BG463129 EM1_47_H02.b1_A002 Embryo 1 (EM1) So... 35 1.0
gb|BQ655978.1|BQ655978 pRC0190 Sorghum halepense rhizome cD... 35 1.0
gb|AF470068.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 35 1.0
gb|CW283137.1|CW283137 104_759_11409087_116_35477_056 Sorgh... 28 1.1
gb|CW041656.1|CW041656 104_275_10506672_115_30285 Sorghum m... 34 1.4
gb|CW262198.1|CW262198 104_729_11229923_148_35205_038 Sorgh... 34 1.4
gb|CW283154.1|CW283154 104_759_11409095_148_35473_088 Sorgh... 34 1.4
gb|CW347757.1|CW347757 fsbb001f007m23k0 Sorghum methylation... 34 1.4
gb|CW380979.1|CW380979 fsbb001f062b21k0 Sorghum methylation... 34 1.4
gb|CW480857.1|CW480857 fsbb001f240c07k0 Sorghum methylation... 34 1.4
gb|BE597638.1|BE597638 PI1_72_C05.b1_A002 Pathogen induced ... 34 1.4
gb|BM322287.1|BM322287 PIC1_2_F02.b1_A002 Pathogen-infected... 34 1.4
gb|CD219576.1|CD219576 CCC1_57_D01.g1_A007 Callus culture/c... 34 1.4
gb|CD226253.1|CD226253 CCC1_44_C07.g1_A007 Callus culture/c... 34 1.4
gb|AF470069.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 34 1.4
gb|AF470070.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 34 1.4
gb|CW115460.1|CW115460 104_490_11106572_116_34593_070 Sorgh... 34 1.4
gb|CW452055.1|CW452055 fsbb001f192g15f0 Sorghum methylation... 31 1.7
gb|BG241945.1|BG241945 RHIZ2_17_F03.b2_A003 Rhizome2 (RHIZ2... 29 1.7
gb|BZ344042.1|BZ344042 hp59a03.b2 WGS-SbicolorF (JM107 adap... 33 1.7
gb|BZ692652.1|BZ692652 SP__Ba0024J08.f SP__Ba Sorghum propi... 33 1.7
gb|CW228809.1|CW228809 104_668_11206585_148_37252_001 Sorgh... 33 1.7
gb|CW295046.1|CW295046 104_776_11460723_148_37441_012 Sorgh... 33 1.7
gb|CW786496.1|CW786496 SP__Ba0024J08.f SP__Ba Sorghum propi... 33 1.7
gb|CN126753.1|CN126753 RHOH1_19_A10.b1_A002 Acid- and alkal... 33 1.7
gb|CW031368.1|CW031368 104_259_10500767_114_30397 Sorghum m... 34 1.9
gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorgh... 34 1.9
gb|CW132119.1|CW132119 104_515_11116041_116_34796_041 Sorgh... 34 1.9
gb|CW156381.1|CW156381 104_559_11146655_116_36375_092 Sorgh... 34 1.9
gb|CW156382.1|CW156382 104_559_11146655_148_36376_092 Sorgh... 34 1.9
gb|CW162339.1|CW162339 104_569_11150891_116_36444_038 Sorgh... 34 1.9
gb|CW172471.1|CW172471 104_583_11156310_116_36536_019 Sorgh... 34 1.9
gb|CW192992.1|CW192992 104_615_11179324_148_36775_006 Sorgh... 34 1.9
>gb|CW406102.1|CW406102 fsbb001f098p11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098p11, DNA
sequence
Length = 724
Score = 114 bits (248), Expect(2) = 6e-043
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1 / -3
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
RWKY+LDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR
Sbjct: 170 RWKYILDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 39
Score = 108 bits (236), Expect(2) = 3e-039
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -3 / +1
Query: 527 LPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
LPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSR YFHL
Sbjct: 40 LPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRMYFHL 171
Score = 96.7 bits (209), Expect(2) = 8e-034
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = -2 / +3
Query: 534 ICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS 397
I P WEMFDHFTPFVSINLL T+QS*FLLLRPRLFVYCWV* V PS
Sbjct: 33 ILPPWEMFDHFTPFVSINLLCTNQS*FLLLRPRLFVYCWV*NVFPS 170
Score = 92.2 bits (199), Expect(2) = 1e-034
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +3 / -2
Query: 396 KMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQTFPRQ 527
+ME+ SRPSNKQRALVATGGTKID C ASLWKQMV*NGQTFPR+
Sbjct: 171 QMEIHSRPSNKQRALVATGGTKIDSCTASLWKQMV*NGQTFPRE 40
Score = 87.3 bits (188), Expect(2) = 2e-029
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = -1 / +2
Query: 523 LGNV*PFYTICFHKLAAHGSILVPPVATKALCLLLGLEGTSI 398
LGNV*PFYTICFHKLA H SILVPPVATKALCLLLGLE SI
Sbjct: 44 LGNV*PFYTICFHKLAVHESILVPPVATKALCLLLGLECISI 169
Score = 81.0 bits (174), Expect(2) = 6e-043
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3 / -3
Query: 294 GR*GTKANGKKTWDEKLANYCMCYTWPKCQLMPFKM 401
GR*GT ANGK+TWDE+LANYCMCYTWPKC M FK+
Sbjct: 683 GR*GTHANGKQTWDERLANYCMCYTWPKCTFMLFKV 576
Score = 75.2 bits (161), Expect(2) = 1e-034
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +1 / -1
Query: 286 SSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSR 399
S +EDEAL QMV +HGTK+W+TIACAIPGRNA+SC SR
Sbjct: 691 SFQEDEALTQMVNKHGTKDWQTIACAIPGRNAHSCFSR 578
Score = 73.8 bits (158), Expect(2) = 5e-027
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +2 / -1
Query: 398 DGSTF*TQQ*TKSLGXXXXXXD*SVRSKFMETNGVKWSNISQAGQM 535
DG+TF*TQQ*TKSLG D* V SKFMETNGVKWSNISQ G++
Sbjct: 169 DGNTF*TQQ*TKSLGRNRRN*D*FVHSKFMETNGVKWSNISQGGRI 32
Score = 72.0 bits (154), Expect(2) = 3e-039
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -3 / +3
Query: 401 HLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSS 294
+LE+HE AFRPGIAHAIV Q FVPCLFTIC SASSS
Sbjct: 576 YLEKHECAFRPGIAHAIVCQSFVPCLFTICVSASSS 683
Score = 66.7 bits (142), Expect(2) = 5e-027
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 293 RKMRH*SKW*KDMGRKTGELLHVLYLAEMPTHAFQ 397
RKMRH KW* +MGRKTG+LLHVLYLAEM HAFQ
Sbjct: 684 RKMRHSRKW*TNMGRKTGKLLHVLYLAEMHIHAFQ 580
Score = 66.2 bits (141), Expect(2) = 8e-034
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -1 / +1
Query: 397 LKGMSWHFGQV*HMQ*FASFSSHVFLPFALVPHLPLMTICVF 272
LK M+ HFGQV*HMQ*FAS SSHV LPFA VPHLP + +F
Sbjct: 580 LKSMNVHFGQV*HMQ*FASLSSHVCLPFA*VPHLPGRKVNLF 705
Score = 61.3 bits (130), Expect(2) = 2e-029
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = -2 / +2
Query: 396 *KA*VGISARYSTCNSSPVFRPMSFYHLL*CLIFL 292
*KA*+ ISARYSTCNS PVFRPM YHL CLIFL
Sbjct: 581 *KA*MCISARYSTCNSLPVFRPMFVYHLRECLIFL 685
>gb|CW261541.1|CW261541 104_728_11229568_116_35175_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229568, DNA
sequence
Length = 599
Score = 114 bits (248), Expect(2) = 6e-027
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1 / -3
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
RWKY+LDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR
Sbjct: 375 RWKYILDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 244
Score = 109 bits (237), Expect = 8e-024
Identities = 45/54 (83%), Positives = 45/54 (83%)
Frame = -3 / +2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
F S LPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSR YFHL
Sbjct: 215 FFTGASIQSYLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRMYFHL 376
Score = 96.7 bits (209), Expect(2) = 4e-021
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = -2 / +1
Query: 534 ICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS 397
I P WEMFDHFTPFVSINLL T+QS*FLLLRPRLFVYCWV* V PS
Sbjct: 238 ILPPWEMFDHFTPFVSINLLCTNQS*FLLLRPRLFVYCWV*NVFPS 375
Score = 92.2 bits (199), Expect(2) = 1e-020
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +3 / -2
Query: 396 KMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQTFPRQ 527
+ME+ SRPSNKQRALVATGGTKID C ASLWKQMV*NGQTFPR+
Sbjct: 376 QMEIHSRPSNKQRALVATGGTKIDSCTASLWKQMV*NGQTFPRE 245
Score = 87.3 bits (188), Expect(2) = 3e-020
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = -1 / +3
Query: 523 LGNV*PFYTICFHKLAAHGSILVPPVATKALCLLLGLEGTSI 398
LGNV*PFYTICFHKLA H SILVPPVATKALCLLLGLE SI
Sbjct: 249 LGNV*PFYTICFHKLAVHESILVPPVATKALCLLLGLECISI 374
Score = 73.8 bits (158), Expect(2) = 1e-014
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +2 / -1
Query: 398 DGSTF*TQQ*TKSLGXXXXXXD*SVRSKFMETNGVKWSNISQAGQM 535
DG+TF*TQQ*TKSLG D* V SKFMETNGVKWSNISQ G++
Sbjct: 374 DGNTF*TQQ*TKSLGRNRRN*D*FVHSKFMETNGVKWSNISQGGRI 237
Score = 30.8 bits (62), Expect(2) = 3e-020
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2 / +2
Query: 555 PMFFECIICPAWEMFDHF 502
PMFFEC ICP HF
Sbjct: 17 PMFFECTICPDCTWGQHF 70
Score = 28.1 bits (56), Expect(2) = 6e-027
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / -3
Query: 521 QAGQMMHSKNIG 556
Q+GQM+HSKNIG
Sbjct: 51 QSGQMVHSKNIG 16
Score = 27.2 bits (54), Expect(2) = 1e-020
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 526 RTNDALKEHWK 558
RTN ALKEHW+
Sbjct: 46 RTNGALKEHWR 14
Score = 25.4 bits (50), Expect(2) = 1e-014
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 525 QDK*CTQRTLE 557
QDK CTQRTLE
Sbjct: 47 QDKWCTQRTLE 15
Score = 24.1 bits (47), Expect(2) = 4e-021
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 556 SNVL*VHHLS 527
SNVL*VHHLS
Sbjct: 16 SNVL*VHHLS 45
>gb|CW261542.1|CW261542 104_728_11229568_148_35171_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229568, DNA
sequence
Length = 580
Score = 81.0 bits (174), Expect(2) = 1e-025
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 294 GR*GTKANGKKTWDEKLANYCMCYTWPKCQLMPFKM 401
GR*GT ANGK+TWDE+LANYCMCYTWPKC M FK+
Sbjct: 260 GR*GTHANGKQTWDERLANYCMCYTWPKCTFMLFKV 367
Score = 75.2 bits (161), Expect(2) = 2e-022
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +1 / +3
Query: 286 SSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSR 399
S +EDEAL QMV +HGTK+W+TIACAIPGRNA+SC SR
Sbjct: 252 SFQEDEALTQMVNKHGTKDWQTIACAIPGRNAHSCFSR 365
Score = 72.0 bits (154), Expect(2) = 2e-025
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -3 / -1
Query: 401 HLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSS 294
+LE+HE AFRPGIAHAIV Q FVPCLFTIC SASSS
Sbjct: 367 YLEKHECAFRPGIAHAIVCQSFVPCLFTICVSASSS 260
Score = 66.7 bits (142), Expect(2) = 6e-015
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2 / +1
Query: 293 RKMRH*SKW*KDMGRKTGELLHVLYLAEMPTHAFQ 397
RKMRH KW* +MGRKTG+LLHVLYLAEM HAFQ
Sbjct: 259 RKMRHSRKW*TNMGRKTGKLLHVLYLAEMHIHAFQ 363
Score = 66.2 bits (141), Expect(2) = 1e-018
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -1 / -2
Query: 397 LKGMSWHFGQV*HMQ*FASFSSHVFLPFALVPHLPLMTICVF 272
LK M+ HFGQV*HMQ*FAS SSHV LPFA VPHLP + +F
Sbjct: 363 LKSMNVHFGQV*HMQ*FASLSSHVCLPFA*VPHLPGRKVNLF 238
Score = 61.7 bits (131), Expect(2) = 2e-025
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -1 / -1
Query: 301 HLPLMTICVFYFWNYCSP*SSGQFSCEEVPL 209
+ PLMTICVF FWNYCS *S GQFSCEEV L
Sbjct: 175 NFPLMTICVFDFWNYCSL*SCGQFSCEEVLL 83
Score = 61.3 bits (130), Expect(2) = 2e-015
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = -2 / -3
Query: 396 *KA*VGISARYSTCNSSPVFRPMSFYHLL*CLIFL 292
*KA*+ ISARYSTCNS PVFRPM YHL CLIFL
Sbjct: 362 *KA*MCISARYSTCNSLPVFRPMFVYHLRECLIFL 258
Score = 53.2 bits (112), Expect(2) = 1e-025
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3 / +3
Query: 207 DRGTSSQENCPELHGEQ*FQK*KTQMVIRGR 299
+R TSSQENCP+L EQ*FQK TQMVIRG+
Sbjct: 81 NRRTSSQENCPQLQREQ*FQKSNTQMVIRGK 173
Score = 51.4 bits (108), Expect(2) = 2e-022
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1 / +1
Query: 211 EGPPHKKIVQNFTESSSSKNKKHRWSSEE 297
EGPP KKIV +F ESSSSK++ RWSSEE
Sbjct: 85 EGPPRKKIVHSFKESSSSKSQIRRWSSEE 171
Score = 45.1 bits (94), Expect(2) = 1e-018
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -2
Query: 297 FL**PSVFFIFGTTALREVLDNFLVRRS 214
FL**PS + FGTTAL E +DNFL RRS
Sbjct: 171 FL**PSAYLTFGTTALFEAVDNFLARRS 88
Score = 39.8 bits (82), Expect(2) = 2e-015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -3 / -3
Query: 308 SASSSSDDHXXXXXXXXXLSVKFWTIFL*GGPSISSDST 192
S SSDDH LS+K WTIFL GGPS+ + T
Sbjct: 182 SKQLSSDDHLRI*LLELLLSLKLWTIFLRGGPSVLNQKT 66
Score = 32.6 bits (66), Expect(2) = 6e-015
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / +2
Query: 254 AVVPKIKNTDGHQRKM 301
AVVPK+K DGHQRK+
Sbjct: 128 AVVPKVKYADGHQRKV 175
>gb|CD227025.1|CD227025 CCC1_49_D01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_49_D01_A007 5', mRNA sequence
Length = 615
Score = 115 bits (251), Expect = 5e-025
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAIN 429
ESS K WS EEDEAL+++V+RHG +NW I IPGR+ SC RW L P +
Sbjct: 172 ESSECDRIKGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSPQVE 351
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ P++ +E+ ++ A GN+W + + PGRT++A+K HW
Sbjct: 352 RRPFTPEEDAAILAAHARLGNRWAAIARLLPGRTDNAVKNHW 477
Score = 52.3 bits (110), Expect = 3e-006
Identities = 35/92 (38%), Positives = 40/92 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+A V PG+ I FP CA +SS +G G H RH+
Sbjct: 479 FQWFLTALSVRPGRRRAIAAQRFPRRACAARIAASSSGVKGRRSTCGDSWLHHRSRHDFP 300
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPGI I QF P T SASSSS H
Sbjct: 299 DRPGIPRPIAVQFRAPWRSTSRRSASSSSGLH 204
>gb|CX614690.1|CX614690 GABR1_15_E05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_E05_A002 5', mRNA sequence
Length = 709
Score = 111 bits (243), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
W ED LK++V ++G +NW IA + GR+ SC RW LDP IN+ +S++EE R
Sbjct: 261 WRPAEDAKLKELVAQYGPQNWNLIAERLDGRSGKSCRLRWFNQLDPRINRRAFSEEEEER 440
Query: 463 LIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
L+ A + YGNKW + + FPGRT++A+K HW
Sbjct: 441 LLAAHRAYGNKWALIARLFPGRTDNAVKNHW 533
Score = 40.2 bits (83), Expect = 0.015
Identities = 29/88 (32%), Positives = 38/88 (43%)
Frame = -3 / -1
Query: 554 QCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAF 375
Q L+A V PGK + HL P CA + SSS ++ I GS H R
Sbjct: 532 QWFLTALSVRPGKRRAMSAHLLPYARCAARSRSSSSSEKARRLIRGSSWLNHRRRQLFPD 353
Query: 374 RPGIAHAIVRQFFVPCLFTICFSASSSS 291
P A+ QF+ P T S +SS+
Sbjct: 352 LPSSLSAMRFQFWGPYCATSSLSLASSA 269
>gb|CD429993.1|CD429993 ETH1_16_D05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_D05_A002 5', mRNA sequence
Length = 703
Score = 111 bits (241), Expect = 1e-023
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 270 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 449
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 450 DDTILRAHARFGNKWATIARLLSGRTDNAIKNHW 551
Score = 49.6 bits (104), Expect = 2e-005
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 553 FQWFLMALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 374
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 373 ERPGMERLMSDQLRAPWRATSRCRASSSS 287
>gb|CN144878.1|CN144878 WOUND1_25_B02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_B02_A002 5', mRNA sequence
Length = 898
Score = 111 bits (241), Expect = 1e-023
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 258 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 437
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 438 DDTILRAHARFGNKWATIARLLSGRTDNAIKNHW 539
Score = 49.6 bits (104), Expect = 2e-005
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 541 FQWFLMALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 362
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 361 ERPGMERLMSDQLRAPWRATSRCRASSSS 275
>gb|CN145216.1|CN145216 WOUND1_27_B08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_27_B08_A002 5', mRNA sequence
Length = 833
Score = 111 bits (241), Expect = 1e-023
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 257 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 436
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 437 DDTILRAHARFGNKWATIARLLSGRTDNAIKNHW 538
Score = 49.6 bits (104), Expect = 2e-005
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 540 FQWFLMALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 361
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 360 ERPGMERLMSDQLRAPWRATSRCRASSSS 274
>gb|CX622730.1|CX622730 GABR1_65_D10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_65_D10_A002 5', mRNA sequence
Length = 733
Score = 111 bits (241), Expect = 1e-023
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 260 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 439
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 440 DDTILRAHARFGNKWATIARLLSGRTDNAIKNHW 541
Score = 49.6 bits (104), Expect = 2e-005
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 543 FQWFLMALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 364
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 363 ERPGMERLMSDQLRAPWRATSRCRASSSS 277
>gb|CX620427.1|CX620427 GABR1_51_F11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_51_F11_A002 5', mRNA sequence
Length = 765
Score = 110 bits (240), Expect = 2e-023
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 253 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 432
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 433 DDTILRAHARFGNKWATIARLLSGRTDNAVKNHW 534
Score = 50.5 bits (106), Expect = 1e-005
Identities = 32/89 (35%), Positives = 41/89 (46%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 536 FQWFLTALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 357
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 356 ERPGMERLMSDQLRAPWRATSRCRASSSS 270
>gb|CD209432.1|CD209432 HS1_42_C05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_42_C05_A012 5', mRNA sequence
Length = 626
Score = 110 bits (239), Expect = 2e-023
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 265 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 444
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT+ A+K HW
Sbjct: 445 DDTILRAHARFGNKWATIARLLSGRTDXAIKNHW 546
Score = 50.5 bits (106), Expect = 1e-005
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 548 FQWFLMAXSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 369
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 368 ERPGMERLMSDQLRAPWRATSRCRASSSS 282
>gb|CW207012.1|CW207012 104_636_11187890_148_36968_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187890, DNA
sequence
Length = 561
Score = 109 bits (237), Expect = 4e-023
Identities = 40/102 (39%), Positives = 65/102 (63%)
Frame = +1 / -2
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAIN 429
E ++ KK W+ +EDEAL++ V++HG +NW IA A+ GR A SC RW L P ++
Sbjct: 314 EGKAADCKKTPWTEKEDEALRRAVRKHGRQNWAAIAGAVAGRGAKSCRLRWCQHLAPELD 135
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
P++ +E+ R++ Q V+GNKW + + GR+++A+K W
Sbjct: 134 SRPFTPEEDARIVELQGVHGNKWATIARFLHGRSDNAVKNRW 9
Score = 61.3 bits (130), Expect = 5e-009
Identities = 36/92 (39%), Positives = 48/92 (52%)
Frame = -3 / +1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+A P + ++ HL P T C+ +SS +G L +G+R + H RH+LA
Sbjct: 7 FQRFLTALSDRPWRKRAMVAHLLPCTPCSSTMRASSSGVKGRLSSSGARCWHHRSRHDLA 186
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RP A A+ QF PC T SASSS H
Sbjct: 187 PRPATAPAMAAQFCRPCFRTARRSASSSFSVH 282
>gb|CF428820.1|CF428820 PH1_17_E04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_E04_A002 5', mRNA sequence
Length = 693
Score = 109 bits (237), Expect = 4e-023
Identities = 40/94 (42%), Positives = 61/94 (64%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EED+AL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 253 KGPWSPEEDKALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 432
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 433 DDTILRAHARFGNKWATIARLLSGRTDNAIKNHW 534
Score = 46.9 bits (98), Expect = 1e-004
Identities = 31/89 (34%), Positives = 39/89 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 536 FQWFLMALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 357
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T A SSS
Sbjct: 356 ERPGMERLMSDQLRAPWRATSRCRALSSS 270
>gb|CB927439.1|CB927439 ABA1_25_G04.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_25_G04_A012 5', mRNA sequence
Length = 615
Score = 108 bits (236), Expect = 5e-023
Identities = 41/94 (43%), Positives = 59/94 (62%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 272 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 451
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT+ A K HW
Sbjct: 452 DDTILRAHARFGNKWATIARLLSGRTDXAXKNHW 553
Score = 51.0 bits (107), Expect = 7e-006
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 555 FQWFLXAXSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 376
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 375 ERPGMERLMSDQLRAPWRATSRCRASSSS 289
>gb|CD219565.1|CD219565 CCC1_57_B10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_B10_A007 5', mRNA sequence
Length = 661
Score = 108 bits (236), Expect = 5e-023
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ +E
Sbjct: 266 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEE 445
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GN W + + GRT++A+K HW
Sbjct: 446 DDTILRAHARFGNNWATIARLLSGRTDNAIKNHW 547
Score = 46.0 bits (96), Expect = 2e-004
Identities = 31/89 (34%), Positives = 39/89 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ L P CAR +SSS +G G H RH+L
Sbjct: 549 FQWFLMALSVRPERRRAMVAQLLPNLACARRMVSSSSGVKGRCSTCGDSWLHHRRRHDLP 370
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 369 ERPGMERLMSDQLRAPWRATSRCRASSSS 283
>gb|CW488464.1|CW488464 fsbb001f254o02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254o02, DNA
sequence
Length = 457
Score = 107 bits (234), Expect = 1e-022
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V RHG +NW I+ +IPGR+ SC RW L P P++ +E
Sbjct: 117 KGPWSPEEDEALQRLVARHGARNWSLISRSIPGRSGKSCRLRWCNQLSPQGEHRPFTPEE 296
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA +GNKW + + GRT++A+K HW
Sbjct: 297 DDTILRAHARFGNKWATIARLLSGRTDNAIKNHW 398
Score = 48.7 bits (102), Expect = 4e-005
Identities = 32/89 (35%), Positives = 40/89 (44%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L A V P + ++ HL P CAR +SSS +G G H RH+L
Sbjct: 400 FQWFLMALSVRPERRRAMVAHLLPNLACARRMVSSSSGVKGRCSPCGDSWLHHRRRHDLP 221
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSS 291
RPG+ + Q P T ASSSS
Sbjct: 220 ERPGMERLMSDQLRAPWRATSRCRASSSS 134
>gb|CL157022.1|CL157022 104_344_10783261_116_31374_205 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783261, DNA
sequence
Length = 657
Score = 107 bits (233), Expect = 1e-022
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
KK WS EED L ++V++HG W I+ AIPGR+ SC RW L P ++ P++
Sbjct: 404 KKGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSCRLRWCNQLSPDVHHRPFTPH 225
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ A YGNKW + + PGRT++++K HW
Sbjct: 224 EDALILAAHSRYGNKWATIARLLPGRTDNSIKNHW 120
Score = 45.6 bits (95), Expect = 3e-004
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = -3 / +1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L V PG+ ++ HL P* A +SSC +G +G R +L
Sbjct: 118 FQWFLMELSVRPGRRRAMVAHLLP*REWAARMSASSCGVKGRWCTSGLSWLHQRRRQDLP 297
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG+A + Q + PC T S +SSS H
Sbjct: 298 ERPGMAALMRLQRWAPCCSTSLVSRASSSGLH 393
>gb|CW290719.1|CW290719 104_770_11413166_116_35566_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413166, DNA
sequence
Length = 651
Score = 107 bits (233), Expect = 1e-022
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
KK WS EED L ++V++HG W I+ AIPGR+ SC RW L P ++ P++
Sbjct: 189 KKGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSCRLRWCNQLSPDVHHRPFTPH 368
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ A YGNKW + + PGRT++++K HW
Sbjct: 369 EDALILAAHSRYGNKWATIARLLPGRTDNSIKNHW 473
Score = 45.6 bits (95), Expect = 3e-004
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L V PG+ ++ HL P* A +SSC +G +G R +L
Sbjct: 475 FQWFLMELSVRPGRRRAMVAHLLP*REWAARMSASSCGVKGRWCTSGLSWLHQRRRQDLP 296
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG+A + Q + PC T S +SSS H
Sbjct: 295 ERPGMAALMRLQRWAPCCSTSLVSRASSSGLH 200
>gb|CW273831.1|CW273831 104_746_11404109_148_35368_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404109, DNA
sequence
Length = 715
Score = 104 bits (227), Expect = 9e-022
Identities = 37/95 (38%), Positives = 58/95 (61%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
++ WS EED L ++V++HG W I+ AIPGR+ SC RW L P ++ P++
Sbjct: 635 RRGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSCRLRWCNQLSPDVHHRPFTPH 456
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ A YGNKW + + PGRT++++K HW
Sbjct: 455 EDALILAAHSRYGNKWATIARLLPGRTDNSIKNHW 351
Score = 43.3 bits (90), Expect = 0.002
Identities = 30/92 (32%), Positives = 41/92 (44%)
Frame = -3 / +1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L V PG+ ++ HL P A +SSC +G +G R +L
Sbjct: 349 FQWFLMELSVRPGRRRAMVAHLLPXREWAARMSASSCGVKGRWCTSGLSWLHQRRRQDLP 528
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG+A + Q + PC T S +SSS H
Sbjct: 529 ERPGMAALMRLQRWAPCCSTSLVSRASSSGLH 624
>gb|CW217349.1|CW217349 104_650_11195609_116_37133_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195609, DNA
sequence
Length = 559
Score = 98.9 bits (214), Expect = 5e-020
Identities = 37/92 (40%), Positives = 56/92 (60%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
KK WS EED L ++V++HG W I+ AIPGR+ SC RW L P ++ P++
Sbjct: 284 KKGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSCRLRWCNQLSPDVHHRPFTPH 463
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALK 546
E+ ++ A YGNKW + + PGRT++++K
Sbjct: 464 EDALILAAHSRYGNKWATIARLLPGRTDNSIK 559
Score = 43.3 bits (90), Expect = 0.002
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = -3 / -2
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAI 351
V PG+ ++ HL P* A +SSC +G +G R +L RPG+A +
Sbjct: 543 VRPGRRRAMVAHLLP*REWAARMSASSCGVKGRWCTSGLSWLHQRRRQDLPERPGMAALM 364
Query: 350 VRQFFVPCLFTICFSASSSSDDH 282
Q + PC T S +SSS H
Sbjct: 363 RLQRWAPCCSTSLVSRASSSGLH 295
>gb|CB927712.1|CB927712 ABA1_27_C05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_27_C05_A012 5', mRNA sequence
Length = 539
Score = 78.8 bits (169), Expect(2) = 8e-020
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +1 / +1
Query: 364 IPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDAL 543
+ GR+ C RW LDP INK+PW+++EE + A + +GNKW ++ K PGRT++++
Sbjct: 142 LKGRSGKQCRERWHNHLDPKINKKPWTEREEQIIFGAHKKFGNKWAEIAKLLPGRTDNSM 321
Query: 544 KEHW 555
K H+
Sbjct: 322 KNHF 333
Score = 38.9 bits (80), Expect(2) = 8e-020
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+S S + WS ED+A+K++V+++G + W +A
Sbjct: 13 NSQSMGDRRAWSEIEDKAIKELVEKYGIRKWTVVA 117
Score = 33.9 bits (69), Expect = 1.2
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2 / -3
Query: 546 FECIICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS 397
F II A + F +F+P ++ + ++ + L PRLFV V V+PS
Sbjct: 324 FHRIISSARQQFGYFSPLITKLFMSSENNLLFTLSPRLFVNLGVQVVVPS 175
>gb|CW065423.1|CW065423 104_312_10523140_114_30135 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523140, DNA
sequence
Length = 414
Score = 97.1 bits (210), Expect = 2e-019
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +1 / -2
Query: 292 EEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIR 471
EED+ L++ V RHG +NW I+ IPGR+ SC RW L P + + ++ +E+ ++
Sbjct: 380 EEDDLLRRAVTRHGPRNWTVISAEIPGRSGKSCRLRWCNQLSPGVERRAFTPEEDAVIVA 201
Query: 472 AQQVYGNKWCKMVKHFPGRTNDALKEHW 555
A YGNKW + + GRT++++K HW
Sbjct: 200 AHAQYGNKWATIARMLHGRTDNSVKNHW 117
Score = 51.4 bits (108), Expect = 5e-006
Identities = 32/92 (34%), Positives = 40/92 (43%)
Frame = -3 / +1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V P ++ HL P CA +SS + G H RH+L
Sbjct: 115 FQWFLTELSVRPWSIRAMVAHLLPYCACAATITASSSGVKARRSTPGLSWLHHRRRHDLP 294
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPGI+ + QF PC T S SSSS H
Sbjct: 295 DRPGISALMTVQFLGPCRVTARRSRSSSSGRH 390
>gb|CD222393.1|CD222393 CCC1_21_D01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_D01_A007 5', mRNA sequence
Length = 585
Score = 59.5 bits (126), Expect(2) = 5e-019
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +1 / +2
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
SS S + + W ED LK +V ++G +NW IA + GR+ SC RW LDP +N+
Sbjct: 239 SSRSGHSRGHWRPAEDAKLKDLVAQYGPQNWNLIANKLHGRSGKSCRLRWFNQLDPRLNR 418
Score = 55.5 bits (117), Expect(2) = 5e-019
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 445 QQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
++EE RL+ A + YGNKW + + FPGRT+ A+K HW
Sbjct: 432 EEEEERLLAAHRAYGNKWALIARLFPGRTDXAVKNHW 542
>gb|CW087009.1|CW087009 104_431_10947347_114_33026_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947347, DNA
sequence
Length = 792
Score = 87.7 bits (189), Expect(2) = 1e-018
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +1 / +2
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
RW LDPAINKE WS+QEEL+LIRA Q+YG++W KMVKHFPGR
Sbjct: 119 RWTRSLDPAINKEGWSEQEELKLIRAHQIYGSQWLKMVKHFPGR 250
Score = 65.3 bits (139), Expect(2) = 7e-013
Identities = 31/44 (70%), Positives = 31/44 (70%)
Frame = -3 / -1
Query: 527 LPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
LPGKCLTIL H P ARIN SSSC DQ SLFIAGSR HL
Sbjct: 249 LPGKCLTILSHWLPYI**ARINFSSSCSDQPSLFIAGSRLRVHL 118
Score = 62.2 bits (132), Expect(2) = 6e-011
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3 / +1
Query: 399 MEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQTFP 521
M+ S PSNKQR LV TGG KID ++++WK + *NGQTFP
Sbjct: 121 MDTQS*PSNKQRGLVRTGGAKIDSSSSNIWKPVA*NGQTFP 243
Score = 59.0 bits (125), Expect = 2e-008
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = -2 / -3
Query: 534 ICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS 397
I P EMFDHF P SI L+ ++Q * LL P LFVYCWV PS
Sbjct: 256 IIPPREMFDHFKPLASIYLMSSNQF*LLLF*PTLFVYCWVKTACPS 119
Score = 45.1 bits (94), Expect = 4e-004
Identities = 23/41 (56%), Positives = 24/41 (58%)
Frame = -1 / -2
Query: 520 GNV*PFYTICFHKLAAHGSILVPPVATKALCLLLGLEGTSI 398
GNV*PF FH SIL PPV T LCLLLG + SI
Sbjct: 242 GNV*PF*ATGFHIFDELESILAPPVLTNPLCLLLGQDCVSI 120
Score = 43.3 bits (90), Expect(2) = 1e-004
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +2 / +3
Query: 398 DGSTF*TQQ*TKSLGXXXXXXD*SVRSKFMETNGVKWSNISQAGQMM 538
DG TQQ*TK +G +* K+ME +G+KWSNIS G ++
Sbjct: 120 DGHAVLTQQ*TKRVGQNRRS*N*FELIKYMEASGLKWSNISLGGMIV 260
Score = 28.6 bits (57), Expect(2) = 7e-013
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 555 PMFFECIICPAW 520
P+FFEC+ICP +
Sbjct: 453 PVFFECMICPGY 418
Score = 27.2 bits (54), Expect(2) = 1e-018
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 526 RTNDALKEHWK 558
RTN ALKEHW+
Sbjct: 424 RTNHALKEHWR 456
Score = 25.4 bits (50), Expect(2) = 6e-011
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 525 QDK*CTQRTLE 557
QDK CTQRTLE
Sbjct: 423 QDKSCTQRTLE 455
Score = 23.2 bits (45), Expect(2) = 1e-004
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 527 GQMMHSKNIG 556
GQ+MHSKN G
Sbjct: 425 GQIMHSKNTG 454
>gb|CW387429.1|CW387429 fsbb001f071m07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f071m07, DNA
sequence
Length = 492
Score = 94.0 bits (203), Expect = 2e-018
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAIN 429
E ++ KK W+ +EDEAL++ V+ HG +NW IA A+ GR A SC RW L P ++
Sbjct: 214 EGKAADCKKTPWTEKEDEALRRAVREHGRQNWAAIAGAVAGRGAKSCRLRWCQHLAPELD 393
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVK 513
P++ +E+ R++ Q V+GNKW + +
Sbjct: 394 SRPFTPEEDARIVELQGVHGNKWATIAR 477
Score = 56.8 bits (120), Expect = 1e-007
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = -3 / -2
Query: 497 HLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFT 318
HL P T C+ +SS +G L +G+R + H RH+LA RP A A+ QF PC T
Sbjct: 461 HLLPCTPCSSTMRASSSGVKGRLSSSGARCWHHRSRHDLAPRPATAPAMAAQFCRPCSRT 282
Query: 317 ICFSASSSSDDH 282
SASSS H
Sbjct: 281 ARRSASSSFSVH 246
>gb|CW072209.1|CW072209 104_325_10592132_114_30536 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592132, DNA
sequence
Length = 567
Score = 93.6 bits (202), Expect = 2e-018
Identities = 36/91 (39%), Positives = 55/91 (60%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAIN 429
E ++ KK W+ +EDEAL++ V+ HG +NW IA A+ GR A SC RW L P ++
Sbjct: 258 EGKAADCKKTPWTEKEDEALRRAVREHGRQNWAAIAGAVAGRGAKSCRLRWCQHLAPELD 437
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFP 522
P++ +E+ R++ Q V+GNKW + P
Sbjct: 438 SRPFTPEEDARIVELQGVHGNKWATIAALSP 530
Score = 59.0 bits (125), Expect = 2e-008
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = -3 / -3
Query: 521 GKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQ 342
G+ ++ HL P T C+ +SS +G L +G+R + H RH+LA RP A A+ Q
Sbjct: 529 GESAAMVAHLLPCTPCSSTMRASSSGVKGRLSSSGARCWHHRSRHDLAPRPATAPAMAAQ 350
Query: 341 FFVPCLFTICFSASSSSDDH 282
F PC T SASSS H
Sbjct: 349 FCRPCSRTARRSASSSFSVH 290
>gb|CW494840.1|CW494840 fsbb001f286f08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286f08, DNA
sequence
Length = 390
Score = 92.7 bits (200), Expect = 4e-018
Identities = 31/77 (40%), Positives = 51/77 (66%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
WS EED+AL+++V+RHG +NW I IPGR+ SC RW+ L P + + P++ +E+
Sbjct: 152 WSPEEDDALRRLVERHGARNWTAIGREIPGRSGKSCRLRWRNQLSPQVERRPFTPEEDAA 331
Query: 463 LIRAQQVYGNKWCKMVK 513
++RA+ GN+W + +
Sbjct: 332 IVRARARLGNRWAAIAR 382
Score = 42.4 bits (88), Expect = 0.003
Identities = 26/64 (40%), Positives = 30/64 (46%)
Frame = -3 / -1
Query: 473 ARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSS 294
AR +SS +G G H RH+L RPGI+ I Q PC T SASSS
Sbjct: 342 ARTMAASSSGVKGRRSTCGDSWLRHRRRHDLPDRPGISRPIAVQLRAPCRSTSRRSASSS 163
Query: 293 SDDH 282
S H
Sbjct: 162 SGLH 151
>gb|BM325645.1|BM325645 PIC1_47_A12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 612
Score = 91.8 bits (198), Expect = 7e-018
Identities = 36/91 (39%), Positives = 52/91 (57%)
Frame = +1 / +1
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
WS+EED L+ + HGT NW IA + A C RW L+ K WS++E++
Sbjct: 328 WSAEEDGVLRAQIALHGTDNWTIIAAQFKDKTARQCRRRWYNYLNSECKKGGWSREEDML 507
Query: 463 LIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
L AQ+V GNKW ++ K GRT++A+K +
Sbjct: 508 LCEAQKVLGNKWTEIAKVVSGRTDNAVKNRF 600
>gb|CW083983.1|CW083983 104_426_10945501_116_32438_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945501, DNA
sequence
Length = 686
Score = 65.3 bits (139), Expect(2) = 4e-017
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +1 / -2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWS 444
WS EED L +V++ G +NW IA IPGR+ SC RW LDP + ++P++
Sbjct: 562 WSPEEDTVLSNLVEKLGARNWTLIARGIPGRSGKSCRLRWCNQLDPQVKRKPFT 401
Score = 44.7 bits (93), Expect(2) = 4e-017
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 442 SQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++E+ ++ A V+GNKW + K GRT++A+K HW
Sbjct: 203 AEEEDRIIMAAHAVHGNKWACIAKLLDGRTDNAIKNHW 90
Score = 33.9 bits (69), Expect(2) = 4e-004
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3 / +3
Query: 419 GSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
GS R +L RPG+ AI QF P T S SSS DH
Sbjct: 426 GSS*LHQRRRQDLPERPGMPRAISVQFRAPSFSTRLLSTVSSSGDH 563
Score = 30.3 bits (61), Expect(2) = 4e-004
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -3 / +1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSS 450
FQ L A VLP K I HLFP T A I + SS
Sbjct: 88 FQ*FLMALSVLPSKSFAIHAHLFPWTA*AAIIIRSS 195
>gb|CW124122.1|CW124122 104_503_11111597_148_34693_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111597, DNA
sequence
Length = 624
Score = 67.6 bits (144), Expect(2) = 4e-016
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1 / +3
Query: 358 CAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTND 537
CA R+ SC RW L P + KEP S++EE +I QQ GN+W + PGRT++
Sbjct: 363 CAGLRRSGKSCRLRWMNYLRPDLKKEPISKREEETIISLQQSLGNRWSTIAARMPGRTDN 542
Query: 538 ALKEHW 555
+K +W
Sbjct: 543 EIKNYW 560
Score = 41.6 bits (86), Expect = 0.006
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L + VLPG I+ H P CC + +SSS + GS +G R + H L
Sbjct: 562 FQ*FLISLSVLPGILAAIVDHRLPSDCCKEMMVSSSRLEMGSFLRSGRR*FIHRSLQLLP 383
Query: 377 FRPGIAHA 354
AH+
Sbjct: 382 LLRSPAHS 359
Score = 37.5 bits (77), Expect(2) = 4e-016
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ ++K +K WS EEDE L + HG W ++A
Sbjct: 155 TEANKERKGLWSPEEDERLFTQITYHGVSTWSSVA 259
>gb|CL175915.1|CL175915 104_381_10892781_116_31765_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892781, DNA
sequence
Length = 719
Score = 85.5 bits (184), Expect = 6e-016
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +1 / +1
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
SC RW LDP INK P++++EE RL+ A + +GNKW + +HFPGRT++A+K HW
Sbjct: 121 SCRLRWFNQLDPRINKRPFTEEEEERLLNAHRAHGNKWALIARHFPGRTDNAVKNHW 291
>gb|CW198914.1|CW198914 104_623_11183229_148_37057_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183229, DNA
sequence
Length = 734
Score = 85.5 bits (184), Expect = 6e-016
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +1 / -2
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
SC RW LDP INK P++++EE RL+ A + +GNKW + +HFPGRT++A+K HW
Sbjct: 532 SCRLRWFNQLDPRINKRPFTEEEEERLLNAHRAHGNKWALIARHFPGRTDNAVKNHW 362
>gb|CW396397.1|CW396397 fsbb001f084n04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f084n04, DNA
sequence
Length = 466
Score = 85.5 bits (184), Expect = 6e-016
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +1 / +3
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
SC RW LDP INK P++++EE RL+ A + +GNKW + +HFPGRT++A+K HW
Sbjct: 108 SCRLRWFNQLDPRINKRPFTEEEEERLLNAHRAHGNKWALIARHFPGRTDNAVKNHW 278
>gb|CL148845.1|CL148845 104_329_10593371_148_31784_111 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593371, DNA
sequence
Length = 601
Score = 59.5 bits (126), Expect(2) = 8e-016
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -3 / +1
Query: 89 RWLIGNPSLLCSMSALG*EAPIPPQASAE 3
RWLIG PSLLCSM+AL *EAPIPPQAS E
Sbjct: 415 RWLIGTPSLLCSMAALR*EAPIPPQASPE 501
Score = 56.3 bits (119), Expect(2) = 1e-014
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1 / -3
Query: 1 ASAEACGGIGASYPRADMEQSSDGLPISQR 90
AS EACGGIGASY A MEQSSDG+PI+QR
Sbjct: 503 ASGEACGGIGASYLSAAMEQSSDGVPINQR 414
Score = 52.8 bits (111), Expect(2) = 1e-011
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3 / -2
Query: 3 FSRSLWWNRSFLSESRHGAE**WVANQPA 89
F R LWW+RS LSE HGAE* W ANQPA
Sbjct: 501 FRRGLWWDRSLLSERSHGAE*RWGANQPA 415
Score = 50.1 bits (105), Expect(2) = 5e-010
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 90 PLADWQPITTLLHVCSRIRSSDSTTSFG*S 1
PL DW PI TLLH C++IR SD TTS *S
Sbjct: 414 PLVDWHPIATLLHGCAQIRGSDPTTSLA*S 503
Score = 47.4 bits (99), Expect(2) = 4e-008
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +2 / -1
Query: 2 LQPKLVVESELLIREQTWSRVVMGCQSASGGLT 100
LQ +LVV SE LI Q WSRV MGCQS SG L+
Sbjct: 502 LQARLVVGSEPLI*AQPWSRVAMGCQSTSGELS 404
Score = 44.2 bits (92), Expect(2) = 1e-014
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2 / -2
Query: 89 GGLTVQQNTQASQMRLLKT 145
GGLTVQQNTQASQMRLLKT
Sbjct: 57 GGLTVQQNTQASQMRLLKT 1
Score = 43.8 bits (91), Expect(2) = 8e-016
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1 / +1
Query: 145 CLQQPHLTCLSVLLNC*PS 89
CL+QPHLTCL VLL+C*PS
Sbjct: 1 CLEQPHLTCLGVLLDC*PS 57
Score = 37.5 bits (77), Expect(2) = 1e-011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 82 SQRRANSSTKHSSKSDEVAED 144
S RRANS T+H SKSDEVA+D
Sbjct: 64 SFRRANSPTEHPSKSDEVAQD 2
Score = 33.9 bits (69), Expect(2) = 5e-010
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 144 VFSNLI*LA*VFC*TVSPP 88
V SNLI*LA VFC TVSPP
Sbjct: 2 VLSNLI*LAWVFCWTVSPP 58
Score = 30.3 bits (61), Expect(2) = 4e-008
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3 / -3
Query: 90 EG*QFNKTLKQVR*GC*R 143
EG*Q N+T KQVR*GC R
Sbjct: 56 EG*QSNRTPKQVR*GCSR 3
Score = 29.4 bits (59), Expect(2) = 0.069
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 91 SAG*LATHHYSAPCLLSD 38
+AG*LA H YSAP L SD
Sbjct: 413 TAG*LAPHRYSAPWLRSD 466
Score = 27.2 bits (54), Expect(2) = 0.069
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / +3
Query: 137 ATSSDLLECFVELLAL 90
ATSSDLL C V LLAL
Sbjct: 9 ATSSDLLGCSVGLLAL 56
>gb|CW300131.1|CW300131 104_783_11463487_148_36250_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463487, DNA
sequence
Length = 649
Score = 59.9 bits (127), Expect(2) = 2e-015
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAIN 429
KK W+ EED L++ V HG +NW I+ A+ GRN SC RW L P ++
Sbjct: 259 KKSAWTKEEDAVLREQVLLHGPQNWAAISEALAGRNPKSCRLRWCQHLSPLVD 417
Score = 42.4 bits (88), Expect(2) = 2e-015
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1 / +1
Query: 436 PWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
P++ E+ ++I + V+G+KW + PGRT++A+K W
Sbjct: 427 PFTPLEDEKIIASYCVFGSKWATIAGFLPGRTDNAIKNRW 546
Score = 34.4 bits (70), Expect = 0.91
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3 / -3
Query: 419 GSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
G R + RH+L RP A + QF PC T S +SSS H
Sbjct: 407 GLRCWHQRRRHDLGLRPANASLMAAQFCGPCSRTCSRSTASSSLVH 270
>gb|BG560480.1|BG560480 RHIZ2_74_H08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 510
Score = 81.9 bits (176), Expect = 7e-015
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +1 / +3
Query: 337 KNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
+NW I IPGR+ SC RW L P + + P++ +E+ ++RA GN+W + +
Sbjct: 12 RNWTAIGREIPGRSGKSCRLRWCNQLSPQVERRPFTPEEDAAIVRAHARLGNRWAAIARL 191
Query: 517 FPGRTNDALKEHW 555
PGRT++A+K HW
Sbjct: 192 LPGRTDNAVKNHW 230
Score = 37.5 bits (77), Expect = 0.098
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+A V PG+ + P AR +SS +G G H RH+L
Sbjct: 232 FQWFLTALSVRPGRRRAMAAQRLPSRAWARTMAASSSGVKGRRSTCGDSWLHHRRRHDLP 53
Query: 377 FRPGIAHAIVRQ 342
RPGI+ I Q
Sbjct: 52 DRPGISRPIAVQ 17
>gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_A06_A002 5', mRNA sequence
Length = 771
Score = 64.4 bits (137), Expect(2) = 1e-014
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + ++Q+EE +++ V GNKW + KH PGRT++ +K
Sbjct: 242 RCGKSCRLRWTSYLRPDIKRGKFTQEEEQTILQLHSVLGNKWSAIAKHLPGRTDNEIKNF 421
Query: 553 W 555
W
Sbjct: 422 W 424
Score = 35.7 bits (73), Expect(2) = 1e-014
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L + +++HG +WR +
Sbjct: 137 KKGPWTPEEDQKLMEYIQKHGHGSWRAL 220
>gb|CW257463.1|CW257463 104_723_11227348_116_35159_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227348, DNA
sequence
Length = 638
Score = 67.1 bits (143), Expect(2) = 2e-014
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K S++E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 288 RDAKSCLERWKNYLRPGIKKGSLSEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 467
Query: 553 WK 558
W+
Sbjct: 468 WE 473
Score = 32.6 bits (66), Expect(2) = 2e-014
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++ RW EED L+ V+++G + W ++
Sbjct: 177 ERQRWRPEEDAVLRAYVRQYGPREWHLVS 263
>gb|CW423560.1|CW423560 fsbb001f133g23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f133g23, DNA
sequence
Length = 490
Score = 67.1 bits (143), Expect(2) = 2e-014
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K S++E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 278 RDAKSCLERWKNYLRPGIKKGSLSEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 99
Query: 553 WK 558
W+
Sbjct: 98 WE 93
Score = 32.6 bits (66), Expect(2) = 2e-014
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++ RW EED L+ V+++G + W ++
Sbjct: 389 ERQRWRPEEDAVLRAYVRQYGPREWHLVS 303
>gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H01_A002 5', mRNA sequence
Length = 808
Score = 64.0 bits (136), Expect(2) = 2e-014
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1 / +2
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
SC RW L P I + +SQ+EE ++ V GNKW + H PGRT+D +K W
Sbjct: 314 SCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSVLGNKWSAIATHLPGRTDDEIKNFW 484
Score = 35.3 bits (72), Expect(2) = 2e-014
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EEDE L ++++G +WRT+
Sbjct: 197 KKGPWTQEEDEKLLHYIQKNGHGSWRTL 280
>gb|CW083982.1|CW083982 104_426_10945501_114_32374_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945501, DNA
sequence
Length = 658
Score = 65.3 bits (139), Expect(2) = 3e-014
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWS 444
WS EED L +V++ G +NW IA IPGR+ SC RW LDP + ++P++
Sbjct: 195 WSPEEDTVLSNLVEKLGARNWTLIARGIPGRSGKSCRLRWCNQLDPQVKRKPFT 356
Score = 34.8 bits (71), Expect(2) = 3e-014
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1 / +2
Query: 442 SQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALK 546
+++E+ ++ A V+GNKW + K GRT++A+K
Sbjct: 554 AEEEDRIIMAAHAVHGNKWACIRKLLDGRTDNAIK 658
Score = 33.9 bits (69), Expect(2) = 8e-004
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3 / -1
Query: 419 GSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
GS R +L RPG+ AI QF P T S SSS DH
Sbjct: 331 GSS*LHQRRRQDLPERPGMPRAISVQFRAPSFSTRLLSTVSSSGDH 194
Score = 29.4 bits (59), Expect(2) = 8e-004
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -3 / -2
Query: 545 LSASFVLPGKCLTILHHLFP*TCCARINLSSS 450
L A VLP K L I HLFP T A I + SS
Sbjct: 657 LMALSVLPSKSLRIHAHLFPWTA*AAIIIRSS 562
>gb|CW289076.1|CW289076 104_767_11412286_116_35544_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412286, DNA
sequence
Length = 483
Score = 79.2 bits (170), Expect = 4e-014
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1 / +1
Query: 376 NANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ SC RW LDP IN+ +S++EE RL+ A + YGNKW + + FPGRT++A+K HW
Sbjct: 43 SGKSCRLRWFNQLDPRINRRAFSEEEEERLLAAHRAYGNKWALIARLFPGRTDNAVKNHW 222
Score = 31.7 bits (64), Expect = 6.1
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -3 / -2
Query: 554 QCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLER 390
Q L+A V PGK + HL P CA + SSS ++ I GS H R
Sbjct: 221 QWFLTALSVRPGKRRAMSAHLLPYARCAARSRSSSSSEKARRLIRGSSWLNHRRR 57
>gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_H10_A002 5', mRNA sequence
Length = 671
Score = 65.3 bits (139), Expect(2) = 9e-014
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + + +SQ+EE +I Q GNKW ++ H PGRT++ +K +
Sbjct: 221 RNGKSCRLRWINYLRPGLKRGMFSQEEEDVIINLQAKLGNKWSQIAMHLPGRTDNEVKNY 400
Query: 553 W 555
W
Sbjct: 401 W 403
Score = 31.7 bits (64), Expect(2) = 9e-014
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1 / +2
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
E +K WS EED+ L+ + +HG W +
Sbjct: 95 EKPKMNYRKGLWSPEEDQRLRDYILKHGLGCWSAV 199
>gb|CL175916.1|CL175916 104_381_10892781_148_31764_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892781, DNA
sequence
Length = 729
Score = 77.4 bits (166), Expect = 2e-013
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +1 / -3
Query: 412 LDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
LDP INK P++++EE RL+ A + +GNKW + +HFPGRT++A+K HW
Sbjct: 724 LDPRINKRPFTEEEEERLLNAHRAHGNKWALIARHFPGRTDNAVKNHW 581
>gb|CL175352.1|CL175352 104_380_10892386_148_31766_370 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892386, DNA
sequence
Length = 701
Score = 76.5 bits (164), Expect = 3e-013
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +1 / +2
Query: 376 NANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ SC RW LDP IN+ P+S++EE L+ + +V+GN+W + + FPGRT++A+K HW
Sbjct: 206 SGKSCRLRWFNQLDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHW 385
>gb|CW247142.1|CW247142 104_708_11221636_116_35018_014 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221636, DNA
sequence
Length = 449
Score = 76.5 bits (164), Expect = 3e-013
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +1 / +2
Query: 376 NANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ SC RW LDP IN+ P+S++EE L+ + +V+GN+W + + FPGRT++A+K HW
Sbjct: 56 SGKSCRLRWFNQLDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHW 235
>gb|CW247143.1|CW247143 104_708_11221636_148_35022_014 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221636, DNA
sequence
Length = 449
Score = 76.5 bits (164), Expect = 3e-013
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +1 / -1
Query: 376 NANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ SC RW LDP IN+ P+S++EE L+ + +V+GN+W + + FPGRT++A+K HW
Sbjct: 392 SGKSCRLRWFNQLDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHW 213
>gb|CW435930.1|CW435930 fsbb001f152f02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f152f02, DNA
sequence
Length = 625
Score = 76.5 bits (164), Expect = 3e-013
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +1 / -2
Query: 376 NANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ SC RW LDP IN+ P+S++EE L+ + +V+GN+W + + FPGRT++A+K HW
Sbjct: 492 SGKSCRLRWFNQLDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHW 313
>gb|CW041497.1|CW041497 104_275_10506578_114_30284 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506578, DNA
sequence
Length = 850
Score = 75.6 bits (162), Expect = 5e-013
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +1 / +3
Query: 376 NANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ SC RW LDP IN+ P+S++EE L+ + +V+GN+W + + FPGRT+ A+K HW
Sbjct: 381 SGKSCRLRWFNQLDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDXAVKNHW 560
Score = 31.2 bits (63), Expect = 8.4
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -3 / -1
Query: 554 QCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
Q L+A V PGK L + H P T + SSS ++G I GS HL
Sbjct: 559 QWFLTAXSVRPGKSLAMTAHRLPWTRWEARSSSSSSSEKGLRLILGSS*LNHL 401
>gb|CL701488.2|CL701488 SP__Ba0073I14.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0073I14 5', DNA sequence
Length = 786
Score = 75.6 bits (162), Expect = 5e-013
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +1 / +3
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
SC RW LDP +N++ +S++EE RL+ A+ YG KW + + FPGRT++A+K HW
Sbjct: 111 SCRLRWINQLDPQLNRDAFSKEEEERLLAARHAYGTKWSLIARLFPGRTDNAIKNHW 281
>gb|AF474129.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb42) gene, partial
cds
Length = 1357
Score = 61.3 bits (130), Expect(2) = 2e-012
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + QE+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 981 RTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNY 1160
Query: 553 WK 558
W+
Sbjct: 1161 WR 1166
Score = 33.9 bits (69), Expect(2) = 2e-012
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +1 / +1
Query: 187 QGVESEEIEGPPHKKIVQNFTESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAI 366
+G++ + + H++ + E + + ++ W+ EED L V HG W ++A +
Sbjct: 193 KGIDRKNLMDMAHERDASSEEEVMAGELRRGPWTVEEDLLLVNYVAAHGEGRWNSLARSA 372
Query: 367 PG 372
G
Sbjct: 373 GG 378
>gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_H12_A002 5', mRNA sequence
Length = 745
Score = 61.3 bits (130), Expect(2) = 4e-012
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ ++ GN+W ++ H PGRT++ +K
Sbjct: 471 RCGKSCRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNF 650
Query: 553 W 555
W
Sbjct: 651 W 653
Score = 42.9 bits (89), Expect = 0.002
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHEL 381
FQ L + V PGKC I HLFP SSSCC++ F +G R H R L
Sbjct: 655 FQKFLISLSVRPGKCDAICDHLFPRISWRPTMASSSCCEKLPRFRSGRR*LIHRSRQLL 479
Score = 30.3 bits (61), Expect(2) = 4e-012
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + R+G W ++
Sbjct: 360 KLRKGLWSPEEDEKLYNHIIRYGVGCWSSV 449
>gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_H11_A012 5', mRNA sequence
Length = 650
Score = 61.3 bits (130), Expect(2) = 4e-012
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ ++ GN+W ++ H PGRT++ +K
Sbjct: 316 RCGKSCRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNF 495
Query: 553 W 555
W
Sbjct: 496 W 498
Score = 42.9 bits (89), Expect = 0.002
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHEL 381
FQ L + V PGKC I HLFP SSSCC++ F +G R H R L
Sbjct: 500 FQKFLISLSVRPGKCDAICDHLFPRISWRPTMASSSCCEKLPRFRSGRR*LIHRSRQLL 324
Score = 30.3 bits (61), Expect(2) = 4e-012
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + R+G W ++
Sbjct: 205 KLRKGLWSPEEDEKLYNHIIRYGVGCWSSV 294
>gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb protein (MybY1) gene,
partial cds
Length = 318
Score = 54.1 bits (114), Expect(2) = 4e-012
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L + + S++EE +I+ GN+W + HFPGRT++ +K +
Sbjct: 112 RCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHFPGRTDNEIKNY 291
Query: 553 W 555
W
Sbjct: 292 W 294
Score = 36.6 bits (75), Expect(2) = 4e-012
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ RW++EED+ L + HG +WR++
Sbjct: 7 KRGRWTAEEDQILANYIAEHGEGSWRSL 90
Score = 32.6 bits (66), Expect = 3.2
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L + V PGK L I HL P + + +SSS + L + R H R L
Sbjct: 296 FQ*FLISLSVRPGKWLAIRDHLLPRVAWSLMMMSSSSLEMFPLLTSARR*LIHRSRQLLP 117
Query: 377 FR 372
R
Sbjct: 116 HR 111
>gb|CW381430.1|CW381430 fsbb001f062n10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f062n10, DNA
sequence
Length = 720
Score = 72.5 bits (155), Expect = 5e-012
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1 / +1
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
SC RW LDP IN+ P++ EE L++A + +GN+W + + FPGRT++A+K HW
Sbjct: 382 SCRLRWFNQLDPRINRRPFTAAEEELLLQAHRAHGNRWALISRFFPGRTDNAVKNHW 552
>gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191287, DNA
sequence
Length = 618
Score = 55.0 bits (116), Expect(2) = 6e-012
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + ++ EE +I+ V GN+W + PGRT++ +K H
Sbjct: 329 RCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNH 150
Query: 553 W 555
W
Sbjct: 149 W 147
Score = 37.1 bits (76), Expect(2) = 6e-012
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ +W+ EED L + ++GT+NWR I
Sbjct: 541 KRGQWTPEEDNKLLSYITQYGTRNWRLI 458
>gb|AF474132.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb63) gene,
partial cds
Length = 853
Score = 61.3 bits (130), Expect(2) = 7e-012
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + QE+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 480 RTGKSCRLRWLNYLRPDLRRGNITAQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNY 659
Query: 553 WK 558
W+
Sbjct: 660 WR 665
Score = 29.4 bits (59), Expect(2) = 7e-012
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSC 390
WS EED L V HG W +A A++C
Sbjct: 264 WSVEEDMLLVNYVAAHGEGRWNALARCAGMYAASAC 371
>gb|CX617423.1|CX617423 GABR1_33_D11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_D11_A002 5', mRNA sequence
Length = 714
Score = 63.1 bits (134), Expect(2) = 9e-012
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1 / +2
Query: 358 CAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTND 537
CA R SC RW L P + + + QE+L ++ +GN+W K+ +H PGRT++
Sbjct: 311 CAGLRRTGKSCRLRWLNYLRPDLRRGNITAQEQLLILELHSRWGNRWSKIAQHLPGRTDN 490
Query: 538 ALKEHWK 558
+K +W+
Sbjct: 491 EIKNYWR 511
Score = 27.2 bits (54), Expect(2) = 9e-012
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+ EED L V HG W +A
Sbjct: 233 WTVEEDMLLVNYVAAHGEGRWNALA 307
>gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 5', mRNA sequence
Length = 831
Score = 55.0 bits (116), Expect(2) = 2e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I V GN+W ++ PGRT++ +K
Sbjct: 409 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNL 588
Query: 553 W 555
W
Sbjct: 589 W 591
Score = 35.7 bits (73), Expect = 0.35
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
FQ L + VLPG + I HLFP T + + SSS + L +G R + HL
Sbjct: 593 FQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHL 432
Score = 33.9 bits (69), Expect(2) = 2e-011
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 298 KLRKGLWSPEEDEKLMNHITKHGHGCWSTV 387
>gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 5', mRNA sequence
Length = 665
Score = 55.0 bits (116), Expect(2) = 2e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I V GN+W ++ PGRT++ +K
Sbjct: 317 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNL 496
Query: 553 W 555
W
Sbjct: 497 W 499
Score = 35.7 bits (73), Expect = 0.35
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
FQ L + VLPG + I HLFP T + + SSS + L +G R + HL
Sbjct: 501 FQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHL 340
Score = 33.9 bits (69), Expect(2) = 2e-011
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 206 KLRKGLWSPEEDEKLMNHITKHGHGCWSTV 295
>gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_39_E09_A012 5', mRNA sequence
Length = 615
Score = 55.0 bits (116), Expect(2) = 2e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I V GN+W ++ PGRT++ +K
Sbjct: 426 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNL 605
Query: 553 W 555
W
Sbjct: 606 W 608
Score = 35.7 bits (73), Expect = 0.35
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
FQ L + VLPG + I HLFP T + + SSS + L +G R + HL
Sbjct: 610 FQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHL 449
Score = 33.9 bits (69), Expect(2) = 2e-011
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 315 KLRKGLWSPEEDEKLMNHITKHGHGCWSTV 404
>gb|CW396930.1|CW396930 fsbb001f085j15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085j15, DNA
sequence
Length = 591
Score = 69.3 bits (148), Expect = 4e-011
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1 / +2
Query: 352 IACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRT 531
I+ IPGR+ SC RW L P + + ++ +E+ ++ A YGNKW + + GRT
Sbjct: 2 ISAEIPGRSGKSCRLRWCNQLSPGVERRAFTPEEDAVIVAAHAQYGNKWATIARMLHGRT 181
Query: 532 NDALKEHW 555
++++K HW
Sbjct: 182 DNSVKNHW 205
Score = 34.4 bits (70), Expect = 0.91
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V P ++ HL P CA +SS + G H RH+L
Sbjct: 207 FQWFLTELSVRPWSIRAMVAHLLPYCACAATITASSSGVKARRSTPGLSWLHHRRRHDLP 28
Query: 377 FRPGIA 360
RPGI+
Sbjct: 27 DRPGIS 10
>gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_E12_A002 5', mRNA sequence
Length = 591
Score = 55.0 bits (116), Expect(2) = 4e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I V GN+W ++ PGRT++ +K
Sbjct: 406 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNL 585
Query: 553 W 555
W
Sbjct: 586 W 588
Score = 35.7 bits (73), Expect = 0.35
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
FQ L + VLPG + I HLFP T + + SSS + L +G R + HL
Sbjct: 590 FQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHL 429
Score = 33.0 bits (67), Expect(2) = 4e-011
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 295 KLRKGLWSPEEDEKLMNHMTKHGHGCWSTV 384
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial
cds
Length = 2020
Score = 55.0 bits (116), Expect(2) = 5e-011
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + ++ EE +I+ V GN+W + PGRT++ +K H
Sbjct: 1665 RCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNH 1844
Query: 553 W 555
W
Sbjct: 1845 W 1847
Score = 35.7 bits (73), Expect(2) = 5e-011
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED L + ++GT+NWR I
Sbjct: 1453 KRGPWTPEEDNKLLSYITQYGTRNWRLI 1536
>gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A08_A002 5', mRNA sequence
Length = 876
Score = 57.2 bits (121), Expect(2) = 5e-011
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + ++ +EE +I + GN+W + H PGRT++ +K +
Sbjct: 312 RCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHAIVGNRWAHIASHLPGRTDNEIKNY 491
Query: 553 W 555
W
Sbjct: 492 W 494
Score = 30.3 bits (61), Expect(2) = 5e-011
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1 / +3
Query: 256 SSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ K K+ WS EEDE L + + HG W +
Sbjct: 192 NQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEV 290
>gb|CD233716.1|CD233716 SS1_3_E01.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_3_E01_A012 5', mRNA sequence
Length = 654
Score = 60.4 bits (128), Expect(2) = 8e-011
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + QE+L ++ +GN+W K+ +H PGRT+ +K +
Sbjct: 330 RTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDXEIKNY 509
Query: 553 WK 558
W+
Sbjct: 510 WR 515
Score = 26.8 bits (53), Expect(2) = 8e-011
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +1 / +1
Query: 187 QGVESEEIEGPPHKKIVQNFTESSSSKNKKHRWSSEEDEALKQMVKRHG 333
+G++ + + H++ + E + + ++ W+ EED L V HG
Sbjct: 169 KGIDRKNLMDMAHERDASSEEEVMAGELRRGPWTVEEDLLLVNYVAAHG 315
>gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471615, DNA
sequence
Length = 629
Score = 52.3 bits (110), Expect(2) = 8e-011
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R + SC RW L P I + ++ EE ++ Q + GN+W + + P RT++ +K +
Sbjct: 230 RCSKSCRLRWTNYLRPGIRRGNFTPHEEGIIVHLQSLLGNRWAAIASYLPQRTDNDIKNY 409
Query: 553 W 555
W
Sbjct: 410 W 412
Score = 34.8 bits (71), Expect(2) = 8e-011
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L ++ HG NWR++
Sbjct: 125 KKGPWTPEEDIILVSYIQEHGPGNWRSV 208
>gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019d03, DNA
sequence
Length = 471
Score = 54.6 bits (115), Expect(2) = 8e-011
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + ++ EE +I + GNKW + PGRT++ +K +
Sbjct: 239 RCGKSCRLRWTNYLRPDIKRGRFTDDEEKLIIHLHSLLGNKWSSIATKLPGRTDNEIKNY 60
Query: 553 W 555
W
Sbjct: 59 W 57
Score = 32.6 bits (66), Expect(2) = 8e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L + HG +WR +
Sbjct: 344 KKGPWTPEEDKVLVDYINEHGHGSWRRL 261
>gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence
Length = 745
Score = 54.6 bits (115), Expect(2) = 1e-010
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ EE +I V GN+W ++ PGRT++ +K
Sbjct: 384 RCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 563
Query: 553 W 555
W
Sbjct: 564 W 566
Score = 44.2 bits (92), Expect = 8e-004
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -3 / -1
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
VLPG C I HLFP T C+ + SSS + L +G R + HL
Sbjct: 541 VLPGSCAAI*DHLFPRTACSSMMSSSSSWENAPLLRSGLR*FIHL 407
Score = 32.1 bits (65), Expect(2) = 1e-010
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W ++
Sbjct: 273 KLRKGLWSPEEDEKLMNHITKHGHGCWSSV 362
>gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 54.6 bits (115), Expect(2) = 1e-010
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ EE +I V GN+W ++ PGRT++ +K
Sbjct: 209 RCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 388
Query: 553 W 555
W
Sbjct: 389 W 391
Score = 44.2 bits (92), Expect = 8e-004
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
VLPG C I HLFP T C+ + SSS + L +G R + HL
Sbjct: 366 VLPGSCAAI*DHLFPRTACSSMMSSSSSWENAPLLRSGLR*FIHL 232
Score = 32.1 bits (65), Expect(2) = 1e-010
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W ++
Sbjct: 98 KLRKGLWSPEEDEKLMNHITKHGHGCWSSV 187
>gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 55.0 bits (116), Expect(2) = 1e-010
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++++E+ +I+ +++GNKW + PGRT++ +K +
Sbjct: 363 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKFHELFGNKWSLIAGRLPGRTDNEIKNY 542
Query: 553 W 555
W
Sbjct: 543 W 545
Score = 31.7 bits (64), Expect(2) = 1e-010
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 261 KGAWTKEEDQRLIAYIKAHGEGCWRSL 341
>gb|CD210026.1|CD210026 HS1_56_E12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_E12_A012 5', mRNA sequence
Length = 730
Score = 52.8 bits (111), Expect(2) = 1e-010
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1 / +2
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
RW L P I + +S QEE +I+ + GN+W + H P RT++ +K +W
Sbjct: 287 RWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPNRTDNEIKNYW 445
Score = 33.5 bits (68), Expect(2) = 1e-010
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ HG +WR +
Sbjct: 84 KKGPWTPEEDQKLLAFIEEHGHGSWRAL 167
>gb|CW037176.1|CW037176 104_268_10504189_115_30382 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504189, DNA
sequence
Length = 575
Score = 60.4 bits (128), Expect(2) = 1e-010
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ +E+L ++ +GN+W K+ H PGRT++ +K +
Sbjct: 374 RTGKSCRLRWLNYLRPGVRRGDFTPREQLLILDLHARWGNRWSKIAAHLPGRTDNEVKNY 553
Query: 553 WK 558
W+
Sbjct: 554 WR 559
Score = 25.9 bits (51), Expect(2) = 1e-010
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACA 363
W+ +ED L V HG W +A A
Sbjct: 281 WTVDEDALLAGYVAAHGEGRWNELARA 361
>gb|CW468293.1|CW468293 fsbb001f220g09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f220g09, DNA
sequence
Length = 570
Score = 67.6 bits (144), Expect = 1e-010
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
KK WS EED L ++V++HG W I+ AIPGR+ SC RW L P ++ P++
Sbjct: 184 KKGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSCRLRWCNQLSPDVHHRPFTPH 5
Query: 451 E 453
E
Sbjct: 4 E 2
Score = 31.7 bits (64), Expect = 6.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3 / +3
Query: 452 SCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
SC +G +G R +L RPG+A + Q + PC T S +SSS H
Sbjct: 3 SCGVKGRWCTSGLSWLHQRRRQDLPERPGMAALMRLQRWAPCCSTSLVSRASSSGLH 173
>gb|CW221956.1|CW221956 104_657_11202124_116_37451_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202124, DNA
sequence
Length = 681
Score = 60.8 bits (129), Expect(2) = 1e-010
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + + +E+L ++ +GN+W ++ +H PGRT++ +K +
Sbjct: 400 RTGKSCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRIAQHLPGRTDNEIKNY 579
Query: 553 WK 558
W+
Sbjct: 580 WR 585
Score = 26.8 bits (53), Expect(2) = 1e-010
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+ EED L + HG W +A
Sbjct: 203 WTLEEDNLLMNYIACHGEGRWNLLA 277
>gb|CW368034.1|CW368034 fsbb001f041m19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f041m19, DNA
sequence
Length = 504
Score = 59.0 bits (125), Expect(2) = 2e-010
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + + +E+L ++ +GN+W ++ H PGRT++ +K +
Sbjct: 309 RTGKSCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRISHHLPGRTDNEIKNY 488
Query: 553 WK 558
W+
Sbjct: 489 WR 494
Score = 26.8 bits (53), Expect(2) = 2e-010
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1 / +1
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+ EED L + HG W +A
Sbjct: 112 WTLEEDNLLMNYIACHGEGRWNLLA 186
>gb|CW128654.1|CW128654 104_510_11114127_148_34752_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114127, DNA
sequence
Length = 209
Score = 67.1 bits (143), Expect = 2e-010
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +1 / +2
Query: 385 SCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
SC RW LDP IN+ P++++EE RL+ A + +GNKW + +HFPGR
Sbjct: 65 SCRLRWFNQLDPRINRRPFTKKEEERLLNAHRAHGNKWALIARHFPGR 208
>gb|CX617094.1|CX617094 GABR1_31_D12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_31_D12_A002 5', mRNA sequence
Length = 750
Score = 54.1 bits (114), Expect(2) = 3e-010
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 343 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 522
Query: 553 WK 558
W+
Sbjct: 523 WR 528
Score = 31.2 bits (63), Expect(2) = 3e-010
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 220 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 324
>gb|CW323228.1|CW323228 104_817_11476519_148_35956_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476519, DNA
sequence
Length = 743
Score = 59.5 bits (126), Expect(2) = 3e-010
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + +E+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 262 RTGKSCRLRWLNYLRPDVRRGNITAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNY 441
Query: 553 WK 558
W+
Sbjct: 442 WR 447
Score = 25.9 bits (51), Expect(2) = 3e-010
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1 / +1
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+++ED L + HG W ++A
Sbjct: 169 WTADEDILLVNYIAVHGEGRWNSLA 243
>gb|CW331265.1|CW331265 104_828_11480814_148_36025_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480814, DNA
sequence
Length = 585
Score = 59.5 bits (126), Expect(2) = 3e-010
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + +E+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 426 RTGKSCRLRWLNYLRPDVRRGNITAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNY 247
Query: 553 WK 558
W+
Sbjct: 246 WR 241
Score = 25.9 bits (51), Expect(2) = 3e-010
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1 / -1
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+++ED L + HG W ++A
Sbjct: 519 WTADEDILLVNYIAVHGEGRWNSLA 445
>gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_A11_A002 5', mRNA sequence
Length = 780
Score = 52.8 bits (111), Expect(2) = 3e-010
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++++E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 339 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 518
Query: 553 W 555
W
Sbjct: 519 W 521
Score = 32.1 bits (65), Expect(2) = 3e-010
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 237 KGAWTKEEDDRLVAYIKAHGEGCWRSL 317
>gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_50_F06_A012 5', mRNA sequence
Length = 674
Score = 52.8 bits (111), Expect(2) = 3e-010
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++++E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 368 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 547
Query: 553 W 555
W
Sbjct: 548 W 550
Score = 32.1 bits (65), Expect(2) = 3e-010
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 266 KGAWTKEEDDRLVAYIKAHGEGCWRSL 346
>gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E12_A002 5', mRNA sequence
Length = 608
Score = 52.8 bits (111), Expect(2) = 3e-010
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++++E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 255 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 434
Query: 553 W 555
W
Sbjct: 435 W 437
Score = 32.1 bits (65), Expect(2) = 3e-010
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 153 KGAWTKEEDDRLVAYIKAHGEGCWRSL 233
>gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_17_F02_A012 5', mRNA sequence
Length = 595
Score = 52.8 bits (111), Expect(2) = 3e-010
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++++E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 371 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 550
Query: 553 W 555
W
Sbjct: 551 W 553
Score = 32.1 bits (65), Expect(2) = 3e-010
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 269 KGAWTKEEDDRLVAYIKAHGEGCWRSL 349
>gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_B10_A002 5', mRNA sequence
Length = 564
Score = 52.8 bits (111), Expect(2) = 3e-010
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++++E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 362 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 541
Query: 553 W 555
W
Sbjct: 542 W 544
Score = 32.1 bits (65), Expect(2) = 3e-010
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 260 KGAWTKEEDDRLVAYIKAHGEGCWRSL 340
>gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194554, DNA
sequence
Length = 615
Score = 56.3 bits (119), Expect(2) = 4e-010
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S++EE +I GN+W K+ PGRT++ +K H
Sbjct: 249 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 428
Query: 553 W 555
W
Sbjct: 429 W 431
Score = 31.7 bits (64), Expect = 8.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1 / +3
Query: 289 SEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
SEE+EAL + W IA +PGR N + W + + K
Sbjct: 318 SEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLKK 461
Score = 29.4 bits (59), Expect(2) = 4e-010
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED+ L + HG WR +
Sbjct: 28 KKGPWTAEEDQKLVTFLLSHGHCCWRLV 111
>gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124g17, DNA
sequence
Length = 613
Score = 56.3 bits (119), Expect(2) = 4e-010
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S++EE +I GN+W K+ PGRT++ +K H
Sbjct: 216 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 37
Query: 553 W 555
W
Sbjct: 36 W 34
Score = 29.4 bits (59), Expect(2) = 4e-010
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED+ L + HG WR +
Sbjct: 437 KKGPWTAEEDQKLVTFLLSHGHCCWRLV 354
>gb|CW331264.1|CW331264 104_828_11480814_116_36026_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480814, DNA
sequence
Length = 686
Score = 58.6 bits (124), Expect(2) = 5e-010
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + +E+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 503 RTGKSCRLRWLNYLRPDVRRGNITAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNY 682
Query: 553 W 555
W
Sbjct: 683 W 685
Score = 25.9 bits (51), Expect(2) = 5e-010
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+++ED L + HG W ++A
Sbjct: 410 WTADEDILLVNYIAVHGEGRWNSLA 484
>gb|CN137174.1|CN137174 OX1_55_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_55_D05_A002 5', mRNA sequence
Length = 810
Score = 54.1 bits (114), Expect(2) = 8e-010
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 615 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 794
Query: 553 WK 558
W+
Sbjct: 795 WR 800
Score = 31.2 bits (63), Expect(2) = 8e-010
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 223 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 327
>gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_G12_A002 5', mRNA sequence
Length = 748
Score = 55.9 bits (118), Expect(2) = 8e-010
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I + GNKW ++ PGRT++ +K
Sbjct: 295 RCGKSCRLRWINYLRPDLKRGTFSQEEEDLIIHLHSLLGNKWSQIAAQLPGRTDNEVKNF 474
Query: 553 W 555
W
Sbjct: 475 W 477
Score = 27.7 bits (55), Expect(2) = 8e-010
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K ++ WS EEDE L + ++G W ++
Sbjct: 184 KLRRGLWSPEEDEKLMNHIAQYGHGCWSSV 273
>gb|CD204532.1|CD204532 HS1_8_E04.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_8_E04_A012 5', mRNA sequence
Length = 630
Score = 64.9 bits (138), Expect = 9e-010
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
S + K W+ EEDE L++ V+ +NW+ IA R CL RW+ +L+P +
Sbjct: 364 SGPIRRAKGGWTPEEDETLRKAVEAFKGRNWKKIAEFFQDRTEVQCLHRWQKVLNPELIX 543
Query: 433 EPWSQQEELRLIRAQQVYG 489
PW+Q+E+ ++I YG
Sbjct: 544 GPWTQEEDEKIIDLVGKYG 600
>gb|CW172247.1|CW172247 104_583_11156182_148_36535_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156182, DNA
sequence
Length = 660
Score = 55.9 bits (118), Expect(2) = 1e-009
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + + + E+ + +GNKW K+ K PGRT++ +K +
Sbjct: 378 RNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEIKNY 557
Query: 553 WK 558
W+
Sbjct: 558 WR 563
Score = 28.6 bits (57), Expect(2) = 1e-009
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L + +HG +W +A
Sbjct: 118 RKGPWTLEEDLILVSYISQHGEGSWDNLA 204
>gb|CW404241.1|CW404241 fsbb001f096e20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f096e20, DNA
sequence
Length = 745
Score = 53.2 bits (112), Expect(2) = 1e-009
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 183 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 4
Query: 553 W 555
W
Sbjct: 3 W 1
Score = 31.2 bits (63), Expect(2) = 1e-009
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / -3
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 575 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 471
>gb|CW493828.1|CW493828 fsbb001f284m17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284m17, DNA
sequence
Length = 772
Score = 55.9 bits (118), Expect(2) = 1e-009
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + + + E+ + +GNKW K+ K PGRT++ +K +
Sbjct: 206 RNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEIKNY 27
Query: 553 WK 558
W+
Sbjct: 26 WR 21
Score = 28.6 bits (57), Expect(2) = 1e-009
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L + +HG +W +A
Sbjct: 466 RKGPWTLEEDLILVSYISQHGEGSWDNLA 380
>gb|CN135779.1|CN135779 OX1_38_H11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_H11_A002 5', mRNA sequence
Length = 840
Score = 53.2 bits (112), Expect(2) = 2e-009
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT+ +K
Sbjct: 467 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDXEIKNF 646
Query: 553 WK 558
W+
Sbjct: 647 WR 652
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 75 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 179
>gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D11_A002 5', mRNA sequence
Length = 767
Score = 51.4 bits (108), Expect(2) = 2e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 334 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 513
Query: 553 W 555
W
Sbjct: 514 W 516
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ G NWR +
Sbjct: 229 KKGPWTPEEDKILVNHIQSFGHSNWRAL 312
>gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_F05_A002 5', mRNA sequence
Length = 628
Score = 51.4 bits (108), Expect(2) = 2e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 346 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 525
Query: 553 W 555
W
Sbjct: 526 W 528
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ G NWR +
Sbjct: 241 KKGPWTPEEDKILVNHIQSFGHSNWRAL 324
>gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_70_D11_A012 5', mRNA sequence
Length = 593
Score = 51.4 bits (108), Expect(2) = 2e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 334 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 513
Query: 553 W 555
W
Sbjct: 514 W 516
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ G NWR +
Sbjct: 229 KKGPWTPEEDKILVNHIQSFGHSNWRAL 312
>gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B09_A007 5', mRNA sequence
Length = 592
Score = 51.4 bits (108), Expect(2) = 2e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 336 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 515
Query: 553 W 555
W
Sbjct: 516 W 518
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ G NWR +
Sbjct: 231 KKGPWTPEEDKILVNHIQSFGHSNWRAL 314
>gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_D02_A002 5', mRNA sequence
Length = 551
Score = 51.4 bits (108), Expect(2) = 2e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 353 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 532
Query: 553 W 555
W
Sbjct: 533 W 535
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ G NWR +
Sbjct: 248 KKGPWTPEEDKILVNHIQSFGHSNWRAL 331
>gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 51.4 bits (108), Expect(2) = 2e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 321 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 500
Query: 553 W 555
W
Sbjct: 501 W 503
Score = 31.2 bits (63), Expect(2) = 2e-009
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ G NWR +
Sbjct: 216 KKGPWTPEEDKILVNHIQSFGHSNWRAL 299
>gb|CN129844.1|CN129844 RHOH1_37_F10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_F10_A002 5', mRNA sequence
Length = 793
Score = 58.1 bits (123), Expect(2) = 3e-009
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + S QEE +I +GN+W ++ + PGRT++ +K +
Sbjct: 440 RTGRSCRLRWVNYLHPGLKHGRMSPQEERLIIELHARWGNRWSRIARRLPGRTDNEIKNY 619
Query: 553 WK 558
W+
Sbjct: 620 WR 625
Score = 31.2 bits (63), Expect = 8.4
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -3 / -2
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHEL 381
V PG IL HLFP + I SSC D G R + H R L
Sbjct: 597 VRPGSLRAILDHLFPHRAWSSIIRRSSCGDMRPCLRPG*R*FTHRRRQLL 448
Score = 25.4 bits (50), Expect(2) = 3e-009
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1 / +2
Query: 199 SEEIEGPPHKKIVQNFTESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ I+G ++ + + + +K W+ +ED L V+ G + W IA
Sbjct: 137 SQPIQGRSEQR*CGSNMVTVREEMRKGPWTEQEDMQLVCTVRLFGDRRWDFIA 295
>gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb54) gene, partial
cds
Length = 1899
Score = 57.7 bits (122), Expect(2) = 3e-009
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S +EE +I + GN+W K+ PGRT++ +K H
Sbjct: 1554 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNH 1733
Query: 553 W 555
W
Sbjct: 1734 W 1736
Score = 38.4 bits (79), Expect = 0.052
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ L + VLPG C IL H FP C I + SS D +G R H
Sbjct: 1738 FQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVH 1580
Score = 24.1 bits (47), Expect(2) = 3e-009
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + +G WR +
Sbjct: 1352 KRGPWTVEEDQKLVTFLLTNGHCCWRAV 1435
>gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473239, DNA
sequence
Length = 633
Score = 57.7 bits (122), Expect(2) = 3e-009
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S +EE +I + GN+W K+ PGRT++ +K H
Sbjct: 239 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNH 60
Query: 553 W 555
W
Sbjct: 59 W 57
Score = 38.4 bits (79), Expect = 0.052
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3 / +1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ L + VLPG C IL H FP C I + SS D +G R H
Sbjct: 55 FQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVH 213
Score = 24.1 bits (47), Expect(2) = 3e-009
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + +G WR +
Sbjct: 441 KRGPWTVEEDQKLVTFLLTNGHCCWRAV 358
>gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb53) gene, partial
cds
Length = 1892
Score = 57.7 bits (122), Expect(2) = 3e-009
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S +EE +I + GN+W K+ PGRT++ +K H
Sbjct: 1480 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNH 1659
Query: 553 W 555
W
Sbjct: 1660 W 1662
Score = 38.4 bits (79), Expect = 0.052
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ L + VLPG C IL H FP C I + SS D +G R H
Sbjct: 1664 FQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVH 1506
Score = 26.8 bits (53), Expect(2) = 3e-009
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED+ L + +G WR +
Sbjct: 1241 KKGPWTAEEDQKLVTFLLANGHCCWRAV 1324
>gb|CW406101.1|CW406101 fsbb001f098p11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098p11, DNA
sequence
Length = 743
Score = 61.7 bits (131), Expect = 4e-009
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -1 / -1
Query: 301 HLPLMTICVFYFWNYCSP*SSGQFSCEEVPL 209
+ PLMTICVF FWNYCS *S GQFSCEEV L
Sbjct: 668 NFPLMTICVFDFWNYCSL*SCGQFSCEEVLL 576
Score = 53.2 bits (112), Expect = 1e-006
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3 / +1
Query: 207 DRGTSSQENCPELHGEQ*FQK*KTQMVIRGR 299
+R TSSQENCP+L EQ*FQK TQMVIRG+
Sbjct: 574 NRRTSSQENCPQLQREQ*FQKSNTQMVIRGK 666
Score = 51.4 bits (108), Expect = 1e-005
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1 / +2
Query: 211 EGPPHKKIVQNFTESSSSKNKKHRWSSEE 297
EGPP KKIV +F ESSSSK++ RWSSEE
Sbjct: 578 EGPPRKKIVHSFKESSSSKSQIRRWSSEE 664
Score = 45.1 bits (94), Expect = 4e-004
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -2
Query: 297 FL**PSVFFIFGTTALREVLDNFLVRRS 214
FL**PS + FGTTAL E +DNFL RRS
Sbjct: 664 FL**PSAYLTFGTTALFEAVDNFLARRS 581
Score = 39.8 bits (82), Expect = 0.020
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -3 / -3
Query: 308 SASSSSDDHXXXXXXXXXLSVKFWTIFL*GGPSISSDST 192
S SSDDH LS+K WTIFL GGPS+ + T
Sbjct: 675 SKQLSSDDHLRI*LLELLLSLKLWTIFLRGGPSVLNQKT 559
Score = 32.6 bits (66), Expect = 3.2
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 254 AVVPKIKNTDGHQRKM 301
AVVPK+K DGHQRK+
Sbjct: 621 AVVPKVKYADGHQRKV 668
>gb|CW374733.1|CW374733 fsbb001f051l23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f051l23, DNA
sequence
Length = 807
Score = 55.9 bits (118), Expect(2) = 4e-009
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + + + E+ + +GNKW K+ K PGRT++ +K +
Sbjct: 256 RNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEIKNY 435
Query: 553 WK 558
W+
Sbjct: 436 WR 441
Score = 27.2 bits (54), Expect(2) = 4e-009
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+ EED L + +HG +W +A
Sbjct: 8 WTLEEDLILVSYISQHGEGSWDNLA 82
>gb|CD232590.1|CD232590 SS1_46_D12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_46_D12_A012 5', mRNA sequence
Length = 634
Score = 58.1 bits (123), Expect(2) = 4e-009
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + S QEE +I +GN+W ++ + PGRT++ +K +
Sbjct: 284 RTGKSCRLRWVNYLHPGLKHGRMSPQEERLIIELHARWGNRWSRIARRLPGRTDNEIKNY 463
Query: 553 WK 558
W+
Sbjct: 464 WR 469
Score = 24.5 bits (48), Expect(2) = 4e-009
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ +ED L V+ G + W IA
Sbjct: 53 RKGPWTEQEDMQLVCTVRLFGDRRWDFIA 139
>gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_F10_A002 5', mRNA sequence
Length = 949
Score = 50.5 bits (106), Expect(2) = 4e-009
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 239 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNY 418
Query: 553 W 555
W
Sbjct: 419 W 421
Score = 30.8 bits (62), Expect(2) = 4e-009
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ HG WR++
Sbjct: 137 KGAWTKEEDDRLVAYIRAHGEGCWRSL 217
>gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_54_C12_A012 5', mRNA sequence
Length = 709
Score = 50.5 bits (106), Expect(2) = 4e-009
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 245 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNY 424
Query: 553 W 555
W
Sbjct: 425 W 427
Score = 30.8 bits (62), Expect(2) = 4e-009
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ HG WR++
Sbjct: 143 KGAWTKEEDDRLVAYIRAHGEGCWRSL 223
>gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509121, DNA
sequence
Length = 643
Score = 42.0 bits (87), Expect(3) = 4e-009
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R+ SC RW L P +++EP S+QEE ++ Q++ GN+
Sbjct: 346 RSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 468
Score = 36.6 bits (75), Expect = 0.19
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3 / -3
Query: 509 TILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
T +++LFP + C SSSC + GSL +G R + HL
Sbjct: 482 TNINYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHL 369
Score = 29.9 bits (60), Expect(3) = 4e-009
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K WS +EDE L + +G W ++A
Sbjct: 96 RKGLWSPDEDERLYSHITHYGVGTWSSVA 182
Score = 27.7 bits (55), Expect(3) = 4e-009
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 566 RWSAIAARMPGRTDNEIKNYW 628
>gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb67) gene, partial
cds
Length = 2224
Score = 57.7 bits (122), Expect(2) = 4e-009
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S +EE +I + GN+W K+ PGRT++ +K H
Sbjct: 1753 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNH 1932
Query: 553 W 555
W
Sbjct: 1933 W 1935
Score = 38.4 bits (79), Expect = 0.052
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ L + VLPG C IL H FP C I + SS D +G R H
Sbjct: 1937 FQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVH 1779
Score = 26.8 bits (53), Expect(2) = 4e-009
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED+ L + +G WR +
Sbjct: 1514 KKGPWTAEEDQKLVTFLLANGHCCWRAV 1597
>gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153002, DNA
sequence
Length = 661
Score = 42.0 bits (87), Expect(3) = 4e-009
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R+ SC RW L P +++EP S+QEE ++ Q++ GN+
Sbjct: 309 RSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 187
Score = 36.6 bits (75), Expect = 0.19
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3 / +2
Query: 509 TILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
T +++LFP + C SSSC + GSL +G R + HL
Sbjct: 173 TNINYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHL 286
Score = 29.9 bits (60), Expect(3) = 4e-009
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K WS +EDE L + +G W ++A
Sbjct: 559 RKGLWSPDEDERLYSHITHYGVGTWSSVA 473
Score = 27.7 bits (55), Expect(3) = 4e-009
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 89 RWSAIAARMPGRTDNEIKNYW 27
>gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_G10_A002 5', mRNA sequence
Length = 791
Score = 56.3 bits (119), Expect(2) = 5e-009
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 327 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNY 506
Query: 553 WK 558
W+
Sbjct: 507 WR 512
Score = 24.5 bits (48), Expect(2) = 5e-009
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 216 ETRKGPWTEQEDLQLVCTVRLFGERRWDFIA 308
>gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_A07_A002 5', mRNA sequence
Length = 675
Score = 56.3 bits (119), Expect(2) = 5e-009
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 355 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNY 534
Query: 553 WK 558
W+
Sbjct: 535 WR 540
Score = 24.5 bits (48), Expect(2) = 5e-009
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 216 ETRKGPWTEQEDLQLVCTVRLFGERRWDFIA 308
>gb|BG159081.1|BG159081 RHIZ2_17_F03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 441
Score = 52.3 bits (110), Expect(2) = 5e-009
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRT 531
RN SC RW L P + +S +EE ++ GNKW ++ +H PGRT
Sbjct: 282 RNGKSCRLRWINYLRPGLKHGTFSPEEEETVMSLHATLGNKWSRIARHLPGRT 440
Score = 39.8 bits (82), Expect = 0.020
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -3 / -3
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFR 372
VLPGKC IL HL P I +SSS + F G R H L FR
Sbjct: 439 VLPGKCRAILDHLLPSVAWRLITVSSSSGENVPCFRPGRR*LIHRSLQLLPFR 281
Score = 28.6 bits (57), Expect(2) = 5e-009
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K WS EED+ L+ + HG W +
Sbjct: 177 RKGLWSPEEDQKLRDYILLHGHGCWSAL 260
>gb|CW492389.1|CW492389 fsbb001f282k10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282k10, DNA
sequence
Length = 824
Score = 46.9 bits (98), Expect(2) = 7e-009
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K P+ +E ++IR ++GNKW KM H
Sbjct: 394 RCGKSCRLRWANHLRPDLKKGPFDAEEVDKIIRFHIMWGNKWAKMASH 251
Score = 33.5 bits (68), Expect(2) = 7e-009
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W+ +ED+ LK V+ HG NW +
Sbjct: 499 RKGPWTPDEDKRLKTYVEAHGEGNWNKV 416
>gb|CW492388.1|CW492388 fsbb001f282k10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282k10, DNA
sequence
Length = 702
Score = 46.9 bits (98), Expect(2) = 7e-009
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K P+ +E ++IR ++GNKW KM H
Sbjct: 545 RCGKSCRLRWANHLRPDLKKGPFDAEEVDKIIRFHIMWGNKWAKMASH 688
Score = 33.5 bits (68), Expect(2) = 7e-009
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W+ +ED+ LK V+ HG NW +
Sbjct: 440 RKGPWTPDEDKRLKTYVEAHGEGNWNKV 523
>gb|CW172958.1|CW172958 104_584_11156580_148_36547_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156580, DNA
sequence
Length = 646
Score = 46.9 bits (98), Expect(2) = 7e-009
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K P+ +E ++IR ++GNKW KM H
Sbjct: 378 RCGKSCRLRWANHLRPDLKKGPFDAEEVDKIIRFHIMWGNKWAKMASH 521
Score = 33.5 bits (68), Expect(2) = 7e-009
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W+ +ED+ LK V+ HG NW +
Sbjct: 273 RKGPWTPDEDKRLKTYVEAHGEGNWNKV 356
>gb|CW032214.1|CW032214 104_261_10501251_114_30363 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501251, DNA
sequence
Length = 682
Score = 61.3 bits (130), Expect = 1e-008
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + QE+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 374 RTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNY 553
Query: 553 WK 558
W+
Sbjct: 554 WR 559
>gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 437
Score = 44.2 bits (92), Expect(2) = 1e-008
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I ++ +E+ ++ G+KW + GRT++ +K H
Sbjct: 232 RCGKSCRLRWLNYLRPDIRHGGFTAEEDAVILSLYTQLGSKWSLIASQMEGRTDNDVKNH 411
Query: 553 W 555
W
Sbjct: 412 W 414
Score = 35.3 bits (72), Expect(2) = 1e-008
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGT 336
K+ WS EEDEAL+ V+RHG+
Sbjct: 124 KRGPWSPEEDEALRSYVQRHGS 189
>gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_H03_A002 5', mRNA sequence
Length = 823
Score = 56.3 bits (119), Expect(2) = 2e-008
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 460 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNY 639
Query: 553 WK 558
W+
Sbjct: 640 WR 645
Score = 24.5 bits (48), Expect(2) = 2e-008
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 216 ETRKGPWTEQEDLQLVCTVRLFGERRWDFIA 308
>gb|CD464139.1|CD464139 ETH1_48_H11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_H11_A002 5', mRNA sequence
Length = 723
Score = 53.2 bits (112), Expect(2) = 2e-008
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1 / +3
Query: 337 KNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
++W I+ ++ GR R+ L P I WS +E+ +IR GN+W + H
Sbjct: 309 QSWAMISASMEGRTGKQIRDRFLNKLRPNIKCGDWSPEEDELMIRLLNEIGNRWSLIATH 488
Query: 517 FPGRTNDALKEHW 555
PGRT +K +
Sbjct: 489 LPGRTEGQVKNRY 527
Score = 35.7 bits (73), Expect = 0.54
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +1 / +3
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ PW+ QE+ +L+ + +G W + GRT +++ +
Sbjct: 249 RNPWTPQEDAKLVELMKKHGQSWAMISASMEGRTGKQIRDRF 374
Score = 25.9 bits (51), Expect(2) = 2e-008
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHG 333
++ W+ +ED L +++K+HG
Sbjct: 249 RNPWTPQEDAKLVELMKKHG 308
>gb|AW287502.2|AW287502 LG1_228_H03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 60.4 bits (128), Expect = 2e-008
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
WS+EED L+ + HGT NW IA + A C RW L+ K WS++E++
Sbjct: 260 WSAEEDGVLRAQIALHGTDNWTIIAAQFKDKTARQCRRRWYNYLNSECKKGGWSREEDML 439
Query: 463 L 465
L
Sbjct: 440 L 442
>gb|AW671674.1|AW671674 LG1_349_F08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 52.3 bits (110), Expect(2) = 2e-008
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 202 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 381
Query: 553 WK 558
W+
Sbjct: 382 WR 387
Score = 26.3 bits (52), Expect(2) = 2e-008
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L V+ G + W +A
Sbjct: 97 RKGPWTEEEDAQLVWFVRLFGERRWDFLA 183
>gb|CW041655.1|CW041655 104_275_10506672_114_30284 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506672, DNA
sequence
Length = 704
Score = 36.2 bits (74), Expect(3) = 3e-008
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R + SC RW L P I + +S QEE +I Q + GN+
Sbjct: 340 RCSKSCRLRWTNYLRPGIKRGNFSDQEEKLIIHLQALLGNR 218
Score = 34.4 bits (70), Expect(3) = 3e-008
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 579 KKGPWTPEEDLVLVSYVQDHGPGNWRAV 496
Score = 26.3 bits (52), Expect(3) = 3e-008
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1 / -2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W ++ + P RT++ +K +W
Sbjct: 82 RWAEIASYMPERTDNDIKNYW 20
>gb|CW267925.1|CW267925 104_738_11401002_148_35300_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401002, DNA
sequence
Length = 588
Score = 59.9 bits (127), Expect = 3e-008
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAIN 429
KK W+ EED L++ V HG +NW I+ A+ GRN SC RW L P ++
Sbjct: 373 KKSAWTKEEDAVLREQVLLHGPQNWAAISEALAGRNPKSCRLRWCQHLSPLVD 531
Score = 34.4 bits (70), Expect = 0.91
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3 / -2
Query: 419 GSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
G R + RH+L RP A + QF PC T S +SSS H
Sbjct: 521 GLRCWHQRRRHDLGLRPANASLMAAQFCGPCSRTCSRSTASSSLVH 384
>gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb23) gene, partial cds
Length = 2028
Score = 35.7 bits (73), Expect(3) = 3e-008
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHF 519
R SC RW L P + + ++Q+E+ +I+ Q+ GNK+ V F
Sbjct: 1483 RCGKSCRLRWINYLRPDLKRGNFTQEEDELIIKLHQILGNKYV*YVSVF 1629
Score = 32.1 bits (65), Expect(3) = 3e-008
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 1381 KGAWTKEEDQRLVAYIKAHGEGCWRSL 1461
Score = 26.8 bits (53), Expect(3) = 3e-008
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 1725 RWSLIAGRLPGRTDNEIKNYW 1787
>gb|CW168642.1|CW168642 104_578_11154251_148_36600_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154251, DNA
sequence
Length = 597
Score = 34.4 bits (70), Expect(3) = 5e-008
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EEDE L + V + G WRT+
Sbjct: 134 KRGAWTPEEDELLSRAVAKEGEGRWRTL 217
Score = 33.0 bits (67), Expect(3) = 5e-008
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P I + P + EE ++R ++ GN++
Sbjct: 239 RCGKSCRLRWMNYLRPDIKRGPIAADEEDLILRLHRLLGNRY 364
Score = 26.8 bits (53), Expect(3) = 5e-008
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 471 RWSLIAGRLPGRTDNEIKNYW 533
>gb|CW049823.1|CW049823 104_289_10514282_114_30202 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514282, DNA
sequence
Length = 619
Score = 59.0 bits (125), Expect = 5e-008
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ K+ WS +E++ LI+A + GNKW ++ K PGRT +++K HW
Sbjct: 111 MQKDIWSDEEDMVLIQAHKEVGNKWAEIAKRLPGRTENSIKNHW 242
>gb|CW135304.1|CW135304 104_519_11117773_148_34824_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117773, DNA
sequence
Length = 692
Score = 59.0 bits (125), Expect = 5e-008
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ K+ WS +E++ LI+A + GNKW ++ K PGRT +++K HW
Sbjct: 398 MQKDIWSDEEDMVLIQAHKEVGNKWAEIAKRLPGRTENSIKNHW 529
>gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_B09_A012 5', mRNA sequence
Length = 580
Score = 43.3 bits (90), Expect(2) = 6e-008
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPG 525
R SC RW L P + + +SQ+EE +I V GN+W ++ PG
Sbjct: 428 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPG 580
Score = 33.9 bits (69), Expect(2) = 6e-008
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 317 KLRKGLWSPEEDEKLMNHITKHGHGCWSTV 406
>gb|CX612627.1|CX612627 GABR1_3_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_C04_A002 5', mRNA sequence
Length = 742
Score = 52.3 bits (110), Expect(2) = 7e-008
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 546 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 725
Query: 553 WK 558
W+
Sbjct: 726 WR 731
Score = 26.3 bits (52), Expect(2) = 7e-008
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L V+ G + W +A
Sbjct: 251 RKGPWTEEEDAQLVWFVRLFGERRWDFLA 337
>gb|CX613554.1|CX613554 GABR1_8_G08.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_G08_A002 5', mRNA sequence
Length = 762
Score = 52.3 bits (110), Expect(2) = 7e-008
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 564 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 743
Query: 553 WK 558
W+
Sbjct: 744 WR 749
Score = 26.3 bits (52), Expect(2) = 7e-008
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L V+ G + W +A
Sbjct: 268 RKGPWTEEEDAQLVWFVRLFGERRWDFLA 354
>gb|CN129172.1|CN129172 RHOH1_33_H11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H11_A002 5', mRNA sequence
Length = 855
Score = 41.1 bits (85), Expect(2) = 8e-008
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K ++ +EE +I+ GNKW +M H
Sbjct: 466 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHAKMGNKWARMAAH 609
Score = 35.7 bits (73), Expect(2) = 8e-008
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 361 KKGPWTSAEDAILVDYVKKHGEGNWNAV 444
>gb|CN129081.1|CN129081 RHOH1_33_H11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H11_A002 3', mRNA sequence
Length = 752
Score = 41.1 bits (85), Expect(2) = 8e-008
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K ++ +EE +I+ GNKW +M H
Sbjct: 293 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHAKMGNKWARMAAH 436
Score = 35.7 bits (73), Expect(2) = 8e-008
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 188 KKGPWTSAEDAILVDYVKKHGEGNWNAV 271
>gb|CW176018.1|CW176018 104_588_11158263_148_36579_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158263, DNA
sequence
Length = 427
Score = 41.1 bits (85), Expect(2) = 9e-008
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
R SC RW L P + K P+S +EE ++ + GNKW K+
Sbjct: 184 RCGKSCRLRWANHLRPNLRKGPFSPEEERHILILHGLNGNKWAKI 50
Score = 35.3 bits (72), Expect(2) = 9e-008
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W+ ED+ L V+RHG NW T+
Sbjct: 289 RKGPWTQAEDKLLVDHVRRHGEGNWNTV 206
>gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182e24, DNA
sequence
Length = 806
Score = 33.9 bits (69), Expect(3) = 9e-008
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 101 KLRKGLWSPEEDEKLMNHITKHGHGCWSTV 190
Score = 32.6 bits (66), Expect(3) = 9e-008
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +SQ+EE +I V GN+
Sbjct: 337 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNR 459
Score = 29.0 bits (58), Expect(3) = 9e-008
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1 / +3
Query: 490 NKWCKMVKHFPGRTNDALKEHW 555
N+W ++ PGRT++ +K W
Sbjct: 546 NRWSQIATRLPGRTDNEIKNLW 611
>gb|CW496466.1|CW496466 fsbb001f288l19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288l19, DNA
sequence
Length = 597
Score = 34.4 bits (70), Expect(3) = 9e-008
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EEDE L + V + G WRT+
Sbjct: 160 KRGAWTPEEDELLSRAVAKEGEGRWRTL 243
Score = 33.0 bits (67), Expect(3) = 9e-008
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P I + P + EE ++R ++ GN++
Sbjct: 265 RCGKSCRLRWMNYLRPDIKRGPIAADEEDLILRLHRLLGNRY 390
Score = 25.9 bits (51), Expect(3) = 9e-008
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 496 WCKMVKHFPGRTNDALKEHW 555
W + PGRT++ +K +W
Sbjct: 500 WSLIAGRLPGRTDNEIKNYW 559
>gb|CW332828.1|CW332828 104_830_11481620_148_36038_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481620, DNA
sequence
Length = 637
Score = 41.1 bits (85), Expect(2) = 1e-007
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
R SC RW L P + K P+S +EE ++ + GNKW K+
Sbjct: 135 RCGKSCRLRWANHLRPNLRKGPFSPEEERHILILHGLNGNKWAKI 1
Score = 35.3 bits (72), Expect(2) = 1e-007
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W+ ED+ L V+RHG NW T+
Sbjct: 240 RKGPWTQAEDKLLVDHVRRHGEGNWNTV 157
>gb|BZ344526.1|BZ344526 hp66h07.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp66h07 5', DNA sequence
Length = 628
Score = 41.1 bits (85), Expect(2) = 1e-007
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
R SC RW L P + K P+S +EE ++ + GNKW K+
Sbjct: 149 RCGKSCRLRWANHLRPNLRKGPFSPEEERHILILHGLNGNKWAKI 15
Score = 35.3 bits (72), Expect(2) = 1e-007
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W+ ED+ L V+RHG NW T+
Sbjct: 254 RKGPWTQAEDKLLVDHVRRHGEGNWNTV 171
>gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F03_A002 5', mRNA sequence
Length = 586
Score = 51.0 bits (107), Expect(2) = 1e-007
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +I GN+W K+ PGRT++ +K H
Sbjct: 317 RCGKSCRLRWTNYLRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNH 496
Query: 553 W 555
W
Sbjct: 497 W 499
Score = 25.4 bits (50), Expect(2) = 1e-007
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W++EED L + +G WR +
Sbjct: 212 KRGPWTAEEDRKLINFILTNGHCCWRAV 295
>gb|CL180161.1|CL180161 104_389_10895799_116_31908_327 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895799, DNA
sequence
Length = 661
Score = 57.7 bits (122), Expect = 1e-007
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +1 / +1
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ K+ W+ +E++ LI+A + GNKW ++ K PGRT +++K HW
Sbjct: 526 MQKDIWNDEEDMVLIQAHKEVGNKWAEIAKRLPGRTENSIKNHW 657
>gb|CL180162.1|CL180162 104_389_10895799_148_31907_327 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895799, DNA
sequence
Length = 741
Score = 57.7 bits (122), Expect = 1e-007
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ K+ W+ +E++ LI+A + GNKW ++ K PGRT +++K HW
Sbjct: 343 MQKDIWNDEEDMVLIQAHKEVGNKWAEIAKRLPGRTENSIKNHW 212
>gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118569, DNA
sequence
Length = 576
Score = 57.7 bits (122), Expect = 1e-007
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S +EE +I + GN+W K+ PGRT++ +K H
Sbjct: 442 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNH 263
Query: 553 W 555
W
Sbjct: 262 W 260
Score = 38.4 bits (79), Expect = 0.052
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3 / +3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ L + VLPG C IL H FP C I + SS D +G R H
Sbjct: 258 FQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVH 416
>gb|CW287072.1|CW287072 104_765_11411226_116_35524_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411226, DNA
sequence
Length = 616
Score = 57.7 bits (122), Expect = 1e-007
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ K+ W+ +E++ LI+A + GNKW ++ K PGRT +++K HW
Sbjct: 168 MQKDIWNDEEDMVLIQAHKEVGNKWAEIAKRLPGRTENSIKNHW 299
>gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085d16, DNA
sequence
Length = 652
Score = 57.7 bits (122), Expect = 1e-007
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S +EE +I + GN+W K+ PGRT++ +K H
Sbjct: 111 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNH 290
Query: 553 W 555
W
Sbjct: 291 W 293
Score = 38.4 bits (79), Expect = 0.052
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ L + VLPG C IL H FP C I + SS D +G R H
Sbjct: 295 FQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVH 137
>gb|BE354970.1|BE354970 DG1_10_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 414
Score = 48.7 bits (102), Expect(2) = 2e-007
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1 / +3
Query: 358 CAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
C+ R SC RW L P I + + +E+L ++ +GN+W ++ +H PGR
Sbjct: 243 CSGLKRTGKSCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRIAQHLPGR 413
Score = 26.8 bits (53), Expect(2) = 2e-007
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIA 357
W+ EED L + HG W +A
Sbjct: 165 WTLEEDNLLMNYIACHGEGRWNLLA 239
>gb|CX623122.1|CX623122 GABR1_67_H01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_67_H01_A002 5', mRNA sequence
Length = 785
Score = 46.0 bits (96), Expect(2) = 2e-007
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTND 537
R SC RW L P + + + EE R++ +G++W ++ + PGRT++
Sbjct: 618 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDN 782
Score = 31.2 bits (63), Expect(2) = 2e-007
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 226 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 330
>gb|CW125665.1|CW125665 104_506_11112463_116_34722_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112463, DNA
sequence
Length = 494
Score = 56.8 bits (120), Expect = 2e-007
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +1 / +1
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
++K+ WS E++ LI+A + GNKW ++ K PGRT +++K HW
Sbjct: 19 MHKDIWSD*EDMVLIQAHKEVGNKWAEIAKRLPGRTENSIKNHW 150
>gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504606, DNA
sequence
Length = 760
Score = 44.7 bits (93), Expect(2) = 3e-007
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I +++QE+ + G++W + PGRT++ +K +
Sbjct: 272 RCGKSCRLRWLNYLRPDIKHGGYTEQEDRIICSLYNSIGSRWSIIASKLPGRTDNDVKNY 451
Query: 553 W 555
W
Sbjct: 452 W 454
Score = 31.7 bits (64), Expect(2) = 3e-007
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGT 336
K+ WS EEDE L+ V HGT
Sbjct: 59 KRGPWSPEEDELLRSYVHNHGT 124
>gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506824, DNA
sequence
Length = 625
Score = 56.3 bits (119), Expect = 3e-007
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S++EE +I GN+W K+ PGRT++ +K H
Sbjct: 76 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 255
Query: 553 W 555
W
Sbjct: 256 W 258
Score = 31.7 bits (64), Expect = 8.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1 / +1
Query: 289 SEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
SEE+EAL + W IA +PGR N + W + + K
Sbjct: 145 SEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLKK 288
>gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401724, DNA
sequence
Length = 658
Score = 56.3 bits (119), Expect = 3e-007
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S++EE +I GN+W K+ PGRT++ +K H
Sbjct: 581 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 402
Query: 553 W 555
W
Sbjct: 401 W 399
Score = 31.7 bits (64), Expect = 8.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1 / -3
Query: 289 SEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
SEE+EAL + W IA +PGR N + W + + K
Sbjct: 512 SEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLKK 369
>gb|CW189094.1|CW189094 104_610_11173783_148_37098_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11173783, DNA
sequence
Length = 675
Score = 55.9 bits (118), Expect = 5e-007
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + + + E+ + +GNKW K+ K PGRT++ +K +
Sbjct: 603 RNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEIKNY 424
Query: 553 WK 558
W+
Sbjct: 423 WR 418
>gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 55.9 bits (118), Expect = 5e-007
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I + GNKW ++ PGRT++ +K
Sbjct: 84 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSMMGNKWSQIATQLPGRTDNEVKNF 263
Query: 553 W 555
W
Sbjct: 264 W 266
>gb|CF429061.1|CF429061 PH1_19_D11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_D11_A002 5', mRNA sequence
Length = 692
Score = 55.9 bits (118), Expect = 5e-007
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + S EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 286 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEVKNY 465
Query: 553 WK 558
W+
Sbjct: 466 WR 471
>gb|CW266762.1|CW266762 104_736_11232607_116_35283_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232607, DNA
sequence
Length = 709
Score = 42.0 bits (87), Expect(2) = 5e-007
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K +S EEL + + GNKW +M H
Sbjct: 530 RCGKSCRLRWTNHLRPNLKKGSFSPDEELLIAQLHAQLGNKWARMAAH 673
Score = 32.1 bits (65), Expect(2) = 5e-007
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++ ED L V+ HG NW +
Sbjct: 425 KKGPWTAAEDAMLMDHVRHHGEGNWNAV 508
>gb|CW266763.1|CW266763 104_736_11232607_148_35287_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232607, DNA
sequence
Length = 631
Score = 42.0 bits (87), Expect(2) = 5e-007
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K +S EEL + + GNKW +M H
Sbjct: 275 RCGKSCRLRWTNHLRPNLKKGSFSPDEELLIAQLHAQLGNKWARMAAH 132
Score = 32.1 bits (65), Expect(2) = 5e-007
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++ ED L V+ HG NW +
Sbjct: 380 KKGPWTAAEDAMLMDHVRHHGEGNWNAV 297
>gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_F09_A002 5', mRNA sequence
Length = 439
Score = 44.7 bits (93), Expect(2) = 5e-007
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I +S++E+ ++ G++W + PGRT++ +K +
Sbjct: 257 RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNY 436
Query: 553 W 555
W
Sbjct: 437 W 439
Score = 29.4 bits (59), Expect(2) = 5e-007
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGT 336
KK WS EED LK ++++GT
Sbjct: 149 KKGPWSPEEDAKLKSYIEQNGT 214
>gb|CW203217.1|CW203217 104_629_11185514_116_36913_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185514, DNA
sequence
Length = 277
Score = 41.6 bits (86), Expect(2) = 8e-007
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 427 NKEPWSQQEELRLIRAQQVYGN 492
+KE WS+QEEL+LIRA Q+YG+
Sbjct: 97 HKEGWSEQEELKLIRAHQIYGS 162
Score = 30.8 bits (62), Expect(2) = 8e-007
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 493 KWCKMVKHFPGR 528
+W KMVKHFPGR
Sbjct: 164 QWLKMVKHFPGR 199
Score = 29.9 bits (60), Expect(2) = 0.021
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 429 QRALVATGGTKIDPCAASLWK 491
QR LV T G KID ++++WK
Sbjct: 99 QRGLVRTRGAKIDSSSSNIWK 161
Score = 28.1 bits (56), Expect(2) = 0.028
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 473 ARINLSSSCCDQGSL 429
ARIN SSSC DQ SL
Sbjct: 143 ARINFSSSCSDQPSL 99
Score = 27.7 bits (55), Expect(2) = 0.028
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 527 LPGKCLTILHH 495
LPGKCLTIL H
Sbjct: 198 LPGKCLTILSH 166
Score = 26.3 bits (52), Expect(2) = 0.021
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 467 SVRSKFMETNGVKWSNISQAGQMM 538
S S + +G+KWSNIS G ++
Sbjct: 138 SSSSNIWKLSGLKWSNISLGGMIV 209
Score = 24.5 bits (48), Expect(2) = 8.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 534 ICPAWEMFDHFTP 496
I P EMFDHF P
Sbjct: 205 IIPPREMFDHFKP 167
Score = 22.7 bits (44), Expect(2) = 8.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1 / -1
Query: 505 FYTICFHKLAAHGSILVPPVATKALCL 425
F + FH SIL P V T LC+
Sbjct: 175 FKPLSFHIFDELESILAPLVLTNPLCV 95
>gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 54.6 bits (115), Expect = 1e-006
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ EE +I V GN+W ++ PGRT++ +K
Sbjct: 78 RCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 257
Query: 553 W 555
W
Sbjct: 258 W 260
Score = 44.2 bits (92), Expect = 8e-004
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -3 / -3
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
VLPG C I HLFP T C+ + SSS + L +G R + HL
Sbjct: 235 VLPGSCAAI*DHLFPRTACSSMMSSSSSWENAPLLRSGLR*FIHL 101
>gb|CL155566.1|CL155566 104_341_10782238_116_31472_334 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782238, DNA
sequence
Length = 474
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 131 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 310
Query: 553 WK 558
W+
Sbjct: 311 WR 316
>gb|CW170503.1|CW170503 104_580_11155240_116_36516_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155240, DNA
sequence
Length = 588
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 515 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 336
Query: 553 WK 558
W+
Sbjct: 335 WR 330
>gb|CW273830.1|CW273830 104_746_11404109_116_35364_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404109, DNA
sequence
Length = 712
Score = 54.1 bits (114), Expect = 2e-006
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSC 390
KK WS EED L ++V++HG W I+ AIPGR+ SC
Sbjct: 593 KKGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSC 712
>gb|CW312811.1|CW312811 104_802_11470957_116_35780_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470957, DNA
sequence
Length = 627
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 122 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 301
Query: 553 WK 558
W+
Sbjct: 302 WR 307
>gb|BE357555.1|BE357555 DG1_21_H10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 480
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 270 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 449
Query: 553 WK 558
W+
Sbjct: 450 WR 455
>gb|BE357751.1|BE357751 DG1_22_H09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 480
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 270 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 449
Query: 553 WK 558
W+
Sbjct: 450 WR 455
>gb|CD232287.1|CD232287 SS1_39_B06.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_39_B06_A012 5', mRNA sequence
Length = 371
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 104 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 283
Query: 553 WK 558
W+
Sbjct: 284 WR 289
>gb|CF430007.1|CF430007 PH1_25_C07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C07_A002 5', mRNA sequence
Length = 784
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 301 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 480
Query: 553 WK 558
W+
Sbjct: 481 WR 486
>gb|CN126656.1|CN126656 RHOH1_18_A02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_A02_A002 5', mRNA sequence
Length = 780
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 290 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 469
Query: 553 WK 558
W+
Sbjct: 470 WR 475
>gb|CN128796.1|CN128796 RHOH1_31_D08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_D08_A002 5', mRNA sequence
Length = 820
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 288 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 467
Query: 553 WK 558
W+
Sbjct: 468 WR 473
>gb|CN141027.1|CN141027 OX1_48_H05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_48_H05_A002 5', mRNA sequence
Length = 610
Score = 54.1 bits (114), Expect = 2e-006
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT++ +K
Sbjct: 283 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNF 462
Query: 553 WK 558
W+
Sbjct: 463 WR 468
>gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280l06, DNA
sequence
Length = 400
Score = 53.7 bits (113), Expect = 2e-006
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R + SC RW L P I + +S E+ ++ Q + GN+W + + P RT++ +K +
Sbjct: 43 RCSKSCRLRWTNYLRPGIRRGGFSDHEDRLIVHLQALLGNRWAAIASYLPDRTDNDVKNY 222
Query: 553 W 555
W
Sbjct: 223 W 225
>gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 528
Score = 42.4 bits (88), Expect(2) = 2e-006
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I ++++E+ + G++W + PGRT++ +K +
Sbjct: 277 RCGKSCRLRWLNYLRPDIKHGGYTEEEDRIIWSLYSSIGSRWSIIASKLPGRTDNDVKNY 456
Query: 553 W 555
W
Sbjct: 457 W 459
Score = 29.4 bits (59), Expect(2) = 2e-006
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHG 333
K+ WS EEDE L+ V+R+G
Sbjct: 169 KRGPWSPEEDEQLRSYVQRNG 231
>gb|BG947473.1|BG947473 IP1_4_H01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 354
Score = 46.0 bits (96), Expect(3) = 3e-006
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1 / +1
Query: 442 SQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHWK 558
S EE +I GN+W K+ H PGRT++ +K HW+
Sbjct: 172 SDAEEKLVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWE 288
Score = 23.2 bits (45), Expect(3) = 3e-006
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 277 HRWSSEEDEALKQMVKRHGTKNWRTI 354
H ++EED+ L + +G WR +
Sbjct: 2 HEGTAEEDQKLVSFILGNGQCCWRAV 79
Score = 17.3 bits (32), Expect(3) = 3e-006
Identities = 7/16 (43%), Positives = 7/16 (43%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDP 420
R SC RW L P
Sbjct: 101 RCGKSCRLRWTNYLRP 148
>gb|CD204206.1|CD204206 HS1_4_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_C12_A012 5', mRNA sequence
Length = 697
Score = 53.2 bits (112), Expect = 3e-006
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE R++ +G++W ++ + PGRT+ +K
Sbjct: 510 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDXEIKNF 689
Query: 553 WK 558
W+
Sbjct: 690 WR 695
>gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228081, DNA
sequence
Length = 623
Score = 32.1 bits (65), Expect(3) = 3e-006
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EEDE L ++ HG WR++
Sbjct: 55 KGAWTKEEDERLVAYIRAHGEGCWRSL 135
Score = 30.3 bits (61), Expect(3) = 3e-006
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + ++ E+ +IR + GNK
Sbjct: 157 RCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNK 279
Score = 26.8 bits (53), Expect(3) = 3e-006
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 432 RWSLIAGQLPGRTDNEIKNYW 494
>gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485831, DNA
sequence
Length = 690
Score = 32.1 bits (65), Expect(3) = 4e-006
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EEDE L ++ HG WR++
Sbjct: 471 KGAWTKEEDERLVAYIRAHGEGCWRSL 391
Score = 30.3 bits (61), Expect(3) = 4e-006
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + ++ E+ +IR + GNK
Sbjct: 369 RCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNK 247
Score = 26.8 bits (53), Expect(3) = 4e-006
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 94 RWSLIAGQLPGRTDNEIKNYW 32
>gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893622, DNA
sequence
Length = 723
Score = 32.1 bits (65), Expect(3) = 4e-006
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EEDE L ++ HG WR++
Sbjct: 124 KGAWTKEEDERLVAYIRAHGEGCWRSL 204
Score = 30.3 bits (61), Expect(3) = 4e-006
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + ++ E+ +IR + GNK
Sbjct: 226 RCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNK 348
Score = 26.8 bits (53), Expect(3) = 4e-006
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 501 RWSLIAGQLPGRTDNEIKNYW 563
>gb|CW154933.1|CW154933 104_557_11145867_148_36360_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145867, DNA
sequence
Length = 626
Score = 42.0 bits (87), Expect(2) = 5e-006
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R+ SC RW L P +++EP S+QEE ++ Q++ GN+
Sbjct: 376 RSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 498
Score = 36.6 bits (75), Expect = 0.19
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3 / -1
Query: 509 TILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
T +++LFP + C SSSC + GSL +G R + HL
Sbjct: 512 TNINYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHL 399
Score = 29.9 bits (60), Expect(2) = 5e-006
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K WS +EDE L + +G W ++A
Sbjct: 126 RKGLWSPDEDERLYSHITHYGVGTWSSVA 212
>gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468806, DNA
sequence
Length = 625
Score = 37.1 bits (76), Expect(2) = 5e-006
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ +W+ EED L + ++GT+NWR I
Sbjct: 340 KRGQWTPEEDNKLLSYITQYGTRNWRLI 257
Score = 34.8 bits (71), Expect(2) = 5e-006
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P + ++ EE +I+ V GN+W
Sbjct: 128 RCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRW 3
>gb|AW287632.2|AW287632 LG1_244_E07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 449
Score = 52.3 bits (110), Expect = 5e-006
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 249 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 428
Query: 553 WK 558
W+
Sbjct: 429 WR 434
>gb|BE595825.1|BE595825 PI1_54_E12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 420
Score = 52.3 bits (110), Expect = 5e-006
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 95 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 274
Query: 553 WK 558
W+
Sbjct: 275 WR 280
>gb|CN148046.1|CN148046 WOUND1_53_H06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_H06_A002 5', mRNA sequence
Length = 794
Score = 52.3 bits (110), Expect = 5e-006
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 596 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 775
Query: 553 WK 558
W+
Sbjct: 776 WR 781
>gb|CX606768.1|CX606768 ANR1_4_H01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H01_A002 5', mRNA sequence
Length = 749
Score = 52.3 bits (110), Expect = 5e-006
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGRT++ +K
Sbjct: 137 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNF 316
Query: 553 WK 558
W+
Sbjct: 317 WR 322
>gb|CX621203.1|CX621203 GABR1_56_E01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_56_E01_A002 5', mRNA sequence
Length = 771
Score = 40.7 bits (84), Expect(2) = 6e-006
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPG 525
R SC RW L P + + + EE R++ +G++W ++ + PG
Sbjct: 617 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPG 769
Score = 31.2 bits (63), Expect(2) = 6e-006
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 225 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 329
>gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473099, DNA
sequence
Length = 586
Score = 33.9 bits (69), Expect(3) = 9e-006
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +1 / +1
Query: 490 NKWCKMVKHFPGRTNDALKEHWK 558
N+W ++ + PGRT++ +K +W+
Sbjct: 517 NRWSRIARRLPGRTDNEIKNYWR 585
Score = 29.0 bits (58), Expect(3) = 9e-006
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + S EE ++ +GN+
Sbjct: 310 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 432
Score = 24.5 bits (48), Expect(3) = 9e-006
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 66 ETRKGPWTEQEDLQLVCTVRLFGERRWDFIA 158
>gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484544, DNA
sequence
Length = 735
Score = 42.0 bits (87), Expect(2) = 1e-005
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R+ SC RW L P +++EP S+QEE ++ Q++ GN+
Sbjct: 112 RSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 234
Score = 36.6 bits (75), Expect = 0.19
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3 / -2
Query: 509 TILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
T +++LFP + C SSSC + GSL +G R + HL
Sbjct: 248 TNINYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHL 135
Score = 27.7 bits (55), Expect(2) = 1e-005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 332 RWSAIAARMPGRTDNEIKNYW 394
>gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195661, DNA
sequence
Length = 678
Score = 42.0 bits (87), Expect(2) = 1e-005
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R+ SC RW L P +++EP S+QEE ++ Q++ GN+
Sbjct: 645 RSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 523
Score = 36.6 bits (75), Expect = 0.19
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3 / +2
Query: 509 TILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
T +++LFP + C SSSC + GSL +G R + HL
Sbjct: 509 TNINYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHL 622
Score = 27.7 bits (55), Expect(2) = 1e-005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 425 RWSAIAARMPGRTDNEIKNYW 363
>gb|CL157655.1|CL157655 104_345_10783756_114_31477_316 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783756, DNA
sequence
Length = 523
Score = 51.4 bits (108), Expect = 1e-005
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +1 / +1
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHWK 558
RW L P I K S++E+ +IR Q +GNKW K+ PGRT L + W+
Sbjct: 1 RWINYLRPGIKKGSLSEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWE 162
>gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 51.4 bits (108), Expect = 1e-005
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 77 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 256
Query: 553 W 555
W
Sbjct: 257 W 259
>gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 51.4 bits (108), Expect = 1e-005
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S++EE +I + GN+W + PGRT++ +K
Sbjct: 77 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 256
Query: 553 W 555
W
Sbjct: 257 W 259
>gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227903, DNA
sequence
Length = 664
Score = 33.9 bits (69), Expect(3) = 1e-005
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +1 / -2
Query: 490 NKWCKMVKHFPGRTNDALKEHWK 558
N+W ++ + PGRT++ +K +W+
Sbjct: 201 NRWSRIARRLPGRTDNEIKNYWR 133
Score = 29.0 bits (58), Expect(3) = 1e-005
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + S EE ++ +GN+
Sbjct: 408 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 286
Score = 24.5 bits (48), Expect(3) = 1e-005
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / -1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 652 ETRKGPWTEQEDLQLVCTVRLFGERRWDFIA 560
>gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035l18, DNA
sequence
Length = 712
Score = 33.9 bits (69), Expect(3) = 1e-005
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 490 NKWCKMVKHFPGRTNDALKEHWK 558
N+W ++ + PGRT++ +K +W+
Sbjct: 482 NRWSRIARRLPGRTDNEIKNYWR 550
Score = 29.0 bits (58), Expect(3) = 1e-005
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + S EE ++ +GN+
Sbjct: 275 RTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 397
Score = 24.5 bits (48), Expect(3) = 1e-005
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 31 ETRKGPWTEQEDLQLVCTVRLFGERRWDFIA 123
>gb|CW457158.1|CW457158 fsbb001f202n15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202n15, DNA
sequence
Length = 655
Score = 36.2 bits (74), Expect(2) = 1e-005
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R + SC RW L P I + +S QEE +I Q + GN+
Sbjct: 392 RCSKSCRLRWTNYLRPGIKRGNFSDQEEKLIIHLQALLGNR 514
Score = 34.4 bits (70), Expect(2) = 1e-005
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 153 KKGPWTPEEDLVLVSYVQDHGPGNWRAV 236
>gb|CW347756.1|CW347756 fsbb001f007m23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f007m23, DNA
sequence
Length = 815
Score = 36.2 bits (74), Expect(2) = 2e-005
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R + SC RW L P I + +S QEE +I Q + GN+
Sbjct: 188 RCSKSCRLRWTNYLRPGIKRGNFSDQEEKLIIHLQALLGNR 66
Score = 34.4 bits (70), Expect(2) = 2e-005
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 427 KKGPWTPEEDLVLVSYVQDHGPGNWRAV 344
>gb|CW198757.1|CW198757 104_623_11183144_148_36842_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183144, DNA
sequence
Length = 431
Score = 50.5 bits (106), Expect = 2e-005
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC R L P + + + QE+L ++ + N W K+ +H PGRT++ +K +
Sbjct: 429 RTGKSCRLRGLNYLRPDLRRGNITPQEQLLILELHSRWDNLWSKIAQHLPGRTDNEIKNY 250
Query: 553 WK 558
W+
Sbjct: 249 WR 244
>gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239k04, DNA
sequence
Length = 576
Score = 35.7 bits (73), Expect(2) = 2e-005
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +SQQEE ++ +V GN+
Sbjct: 32 RCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 154
Score = 33.9 bits (69), Expect(2) = 2e-005
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 490 NKWCKMVKHFPGRTNDALKEHW 555
++W ++ KH PGRT++ +K W
Sbjct: 411 HRWAQIAKHLPGRTDNEVKNFW 476
>gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281a22, DNA
sequence
Length = 623
Score = 30.8 bits (62), Expect(3) = 2e-005
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ HG WR++
Sbjct: 512 KGAWTKEEDDRLVAYIRAHGEGCWRSL 432
Score = 28.1 bits (56), Expect(3) = 2e-005
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P + + ++ E+ +I+ + GNK+
Sbjct: 410 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKY 285
Score = 27.2 bits (54), Expect(3) = 2e-005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 148 RWSLIAARLPGRTDNEIKNYW 86
>gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f253c15, DNA
sequence
Length = 692
Score = 35.7 bits (73), Expect(2) = 3e-005
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +SQQEE ++ +V GN+
Sbjct: 35 RCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 157
Score = 33.9 bits (69), Expect(2) = 3e-005
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 490 NKWCKMVKHFPGRTNDALKEHW 555
++W ++ KH PGRT++ +K W
Sbjct: 414 HRWAQIAKHLPGRTDNEVKNFW 479
>gb|CW345225.1|CW345225 104_848_11488373_148_36206_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488373, DNA
sequence
Length = 544
Score = 50.1 bits (105), Expect = 3e-005
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE +++ + +G++W ++ + PGR ++ +K
Sbjct: 245 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRADNEIKNF 66
Query: 553 WK 558
W+
Sbjct: 65 WR 60
>gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463423, DNA
sequence
Length = 706
Score = 35.7 bits (73), Expect(2) = 3e-005
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +SQQEE ++ +V GN+
Sbjct: 71 RCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 193
Score = 33.9 bits (69), Expect(2) = 3e-005
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 490 NKWCKMVKHFPGRTNDALKEHW 555
++W ++ KH PGRT++ +K W
Sbjct: 450 HRWAQIAKHLPGRTDNEVKNFW 515
>gb|CW090149.1|CW090149 104_435_10949116_116_32599_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949116, DNA
sequence
Length = 709
Score = 34.8 bits (71), Expect(2) = 3e-005
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R + SC RW L P I + ++ QEE +I Q + GN+
Sbjct: 302 RCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIIHLQALLGNR 180
Score = 34.8 bits (71), Expect(2) = 3e-005
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 528 KKGPWTPEEDLMLVSYVQEHGPGNWRAV 445
>gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151411, DNA
sequence
Length = 707
Score = 30.8 bits (62), Expect(3) = 3e-005
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ HG WR++
Sbjct: 125 KGAWTKEEDDRLVAYIRAHGEGCWRSL 205
Score = 28.1 bits (56), Expect(3) = 3e-005
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P + + ++ E+ +I+ + GNK+
Sbjct: 227 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKY 352
Score = 27.2 bits (54), Expect(3) = 3e-005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 489 RWSLIAARLPGRTDNEIKNYW 551
>gb|CW288510.1|CW288510 104_767_11411990_148_35540_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411990, DNA
sequence
Length = 673
Score = 35.7 bits (73), Expect(2) = 3e-005
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHF 519
R SC RW L P + + ++Q+E+ +I+ Q+ GNK+ V F
Sbjct: 438 RCGKSCRLRWINYLRPDLKRGNFTQEEDELIIKLHQILGNKYV*YVSVF 584
Score = 32.1 bits (65), Expect(2) = 3e-005
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 336 KGAWTKEEDQRLVAYIKAHGEGCWRSL 416
>gb|CW440051.1|CW440051 fsbb001f158i03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f158i03, DNA
sequence
Length = 524
Score = 35.7 bits (73), Expect(2) = 3e-005
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHF 519
R SC RW L P + + ++Q+E+ +I+ Q+ GNK+ V F
Sbjct: 281 RCGKSCRLRWINYLRPDLKRGNFTQEEDELIIKLHQILGNKYV*YVSVF 427
Score = 32.1 bits (65), Expect(2) = 3e-005
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 179 KGAWTKEEDQRLVAYIKAHGEGCWRSL 259
>gb|CW440141.1|CW440141 fsbb001f158k07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f158k07, DNA
sequence
Length = 483
Score = 35.7 bits (73), Expect(2) = 3e-005
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHF 519
R SC RW L P + + ++Q+E+ +I+ Q+ GNK+ V F
Sbjct: 264 RCGKSCRLRWINYLRPDLKRGNFTQEEDELIIKLHQILGNKYV*YVSVF 410
Score = 32.1 bits (65), Expect(2) = 3e-005
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 162 KGAWTKEEDQRLVAYIKAHGEGCWRSL 242
>gb|CW057979.1|CW057979 104_300_10518502_1_30028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518502, DNA
sequence
Length = 410
Score = 36.2 bits (74), Expect(2) = 3e-005
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED L ++RHG NWR +
Sbjct: 111 KRGPWTPEEDRVLVAHIERHGHSNWRAL 194
Score = 31.2 bits (63), Expect(2) = 3e-005
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + ++ +EE +I+ Q+ GN+
Sbjct: 216 RCGKSCRLRWINYLRPDIKRGNFTAEEEDAIIQLHQMLGNR 338
>gb|CD211312.1|CD211312 HS1_59_F02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_59_F02_A012 5', mRNA sequence
Length = 569
Score = 49.6 bits (104), Expect = 4e-005
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1 / +1
Query: 247 TESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSR 399
T + ++ K W+ EED+ L++ V+ + KNW+ IA + PGR CL R
Sbjct: 415 TTGPARRSSKGNWTPEEDDILREAVETYKGKNWKKIAESFPGRTDVQCLHR 567
>gb|CW257497.1|CW257497 104_723_11227368_116_35159_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227368, DNA
sequence
Length = 607
Score = 31.7 bits (64), Expect(3) = 4e-005
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 430 KGAWTKEEDQRLIAYIKAHGEGCWRSL 350
Score = 26.8 bits (53), Expect(3) = 4e-005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 81 RWSLIAGQLPGRTDNEIKNYW 19
Score = 26.8 bits (53), Expect(3) = 4e-005
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + ++ ++ +I+ + GNK
Sbjct: 328 RCGKSCRLRWMNYLRPDLKRGNFTDDDDEIIIKLHALLGNK 206
>gb|BZ330053.1|BZ330053 hv89f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv89f07 5', DNA sequence
Length = 645
Score = 34.8 bits (71), Expect(2) = 4e-005
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P + + +SQQEE ++ ++ GN++
Sbjct: 614 RCGKSCRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRY 489
Score = 32.6 bits (66), Expect(2) = 4e-005
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1 / -1
Query: 487 GNKWCKMVKHFPGRTNDALKEHW 555
G +W ++ H PGRT++ +K W
Sbjct: 387 GCRWSQIASHLPGRTDNEIKNFW 319
>gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518454, DNA
sequence
Length = 618
Score = 36.2 bits (74), Expect(2) = 4e-005
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED L ++RHG NWR +
Sbjct: 111 KRGPWTPEEDRVLVAHIERHGHSNWRAL 194
Score = 31.2 bits (63), Expect(2) = 4e-005
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + ++ +EE +I+ Q+ GN+
Sbjct: 216 RCGKSCRLRWINYLRPDIKRGNFTAEEEDAIIQLHQMLGNR 338
>gb|CW047730.1|CW047730 104_285_10512861_115_30217 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512861, DNA
sequence
Length = 571
Score = 36.2 bits (74), Expect(2) = 4e-005
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED L ++RHG NWR +
Sbjct: 292 KRGPWTPEEDRVLVAHIERHGHSNWRAL 375
Score = 31.2 bits (63), Expect(2) = 4e-005
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + ++ +EE +I+ Q+ GN+
Sbjct: 397 RCGKSCRLRWINYLRPDIKRGNFTAEEEDAIIQLHQMLGNR 519
>gb|BE594416.1|BE594416 PI1_33_B09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 41.1 bits (85), Expect(2) = 4e-005
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
R SC RW L P + + + EE +++ + +G++W ++ + PGR
Sbjct: 403 RTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGR 558
Score = 26.3 bits (52), Expect(2) = 4e-005
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L V+ G + W +A
Sbjct: 298 RKGPWTEEEDAQLVWFVRLFGERRWDFLA 384
>gb|CW136796.1|CW136796 104_521_11118569_116_34846_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118569, DNA
sequence
Length = 693
Score = 42.0 bits (87), Expect(2) = 5e-005
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALK 546
R SC RW L P + + S +EE +I + GN+W ++ PGR ++
Sbjct: 446 RCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSQIASQLPGRDGHEIR 619
Score = 26.8 bits (53), Expect(2) = 5e-005
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED+ L + +G WR +
Sbjct: 207 KKGPWTAEEDQKLVTFLLANGHCCWRAV 290
>gb|CW157627.1|CW157627 104_561_11147625_148_36388_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147625, DNA
sequence
Length = 696
Score = 37.1 bits (76), Expect(2) = 5e-005
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
RN SC RW L P + + +SQ+EE +I Q GNK
Sbjct: 516 RNGKSCRLRWINYLRPGLKRGMFSQEEEDVVINLQAKLGNK 638
Score = 31.7 bits (64), Expect(2) = 5e-005
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1 / +2
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
E +K WS EED+ L+ + +HG W +
Sbjct: 125 EKPKMNYRKGLWSPEEDQRLRDYILKHGLGCWSAV 229
>gb|CW254409.1|CW254409 104_718_11225650_148_35117_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225650, DNA
sequence
Length = 551
Score = 49.2 bits (103), Expect = 5e-005
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +1 / -3
Query: 412 LDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHWK 558
L P + + ++ +E+L ++ +GN+W K+ H PGRT++ +K +W+
Sbjct: 549 LRPGVRRGDFTPREQLLILDLHARWGNRWSKIAAHLPGRTDNEVKNYWR 403
>gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003648, DNA
sequence
Length = 664
Score = 35.3 bits (72), Expect(2) = 6e-005
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKE 549
R SC RW L P + + +SQQEE +I ++ GN+ V ++A +E
Sbjct: 348 RCGKSCRLRWINYLRPDLKRGSFSQQEEDLIIALHEILGNRSVTAVAMHSSSLHNAAEE 172
Score = 33.0 bits (67), Expect(2) = 6e-005
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / -2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 588 KLRKGLWSPEEDEKLYNHIIRHGVGCWSSV 499
Score = 32.1 bits (65), Expect = 6.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1 / -3
Query: 484 YGNKWCKMVKHFPGRTNDALKEHW 555
Y +W ++ H PGRT++ +K W
Sbjct: 101 YPCRWSQIASHLPGRTDNEIKNFW 30
>gb|AF470061.1| Sorghum bicolor P-type R2R3 Myb protein (Myb44) gene, partial cds
Length = 1707
Score = 35.3 bits (72), Expect(2) = 6e-005
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGN 492
R + SC RW L P I + +S QEE +I Q + GN
Sbjct: 1586 RCSKSCRLRWTNYLRPGIKRGNFSDQEEKLIIHLQALLGN 1705
Score = 34.4 bits (70), Expect(2) = 6e-005
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 1347 KKGPWTPEEDLVLVSYVQDHGPGNWRAV 1430
>gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947659, DNA
sequence
Length = 686
Score = 35.3 bits (72), Expect(2) = 6e-005
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKE 549
R SC RW L P + + +SQQEE +I ++ GN+ V ++A +E
Sbjct: 330 RCGKSCRLRWINYLRPDLKRGSFSQQEEDLIIALHEILGNRSVTAVAMHSSSLHNAAEE 506
Score = 33.0 bits (67), Expect(2) = 6e-005
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 90 KLRKGLWSPEEDEKLYNHIIRHGVGCWSSV 179
Score = 32.1 bits (65), Expect = 6.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1 / +1
Query: 484 YGNKWCKMVKHFPGRTNDALKEHW 555
Y +W ++ H PGRT++ +K W
Sbjct: 577 YPCRWSQIASHLPGRTDNEIKNFW 648
>gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb4) gene, partial cds
Length = 1958
Score = 30.8 bits (62), Expect(3) = 7e-005
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVK 513
R SC RW L P + + ++ EE +I+ + GNK+ V+
Sbjct: 1568 RCGKSCRLRWINYLRPDLKRGNFTADEEETIIKLHAMLGNKYVHTVQ 1708
Score = 29.9 bits (60), Expect(3) = 7e-005
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED L ++++G NWR +
Sbjct: 1336 KGSWTPEEDMRLIAYIQKYGHANWRAL 1416
Score = 27.2 bits (54), Expect(3) = 7e-005
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W K+ PGRT++ +K W
Sbjct: 1844 RWSKIASCLPGRTDNEIKNVW 1906
>gb|AY860968.1| Sorghum bicolor yellow seed1 (y1) gene, y1-rr allele, complete cds; and
y2 pseudogene, complete sequence
Length = 22400
Score = 36.6 bits (75), Expect(2) = 0.002
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ RW++EED+ L + HG +WR++
Sbjct: 17472 KRGRWTAEEDQILANYIAEHGEGSWRSL 17555
Score = 36.6 bits (75), Expect(3) = 7e-005
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ RW++EED+ L + HG +WR++
Sbjct: 2443 KRGRWTAEEDQILANYIAEHGEGSWRSL 2526
Score = 33.9 bits (69), Expect(3) = 7e-005
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + HFPGRT++ +K +W
Sbjct: 7144 RWSLIASHFPGRTDNEIKNYW 7206
Score = 31.7 bits (64), Expect(2) = 0.002
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W +V + PGRT++ +K HW
Sbjct: 19158 RWSLIVGNLPGRTDNEIKNHW 19220
Score = 24.1 bits (47), Expect(3) = 7e-005
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L + + S++EE +I+ GN+
Sbjct: 2810 RCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNR 2932
>gb|CW389572.1|CW389572 fsbb001f074n05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074n05, DNA
sequence
Length = 593
Score = 34.8 bits (71), Expect(2) = 7e-005
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L V+ +GT NWR +
Sbjct: 494 KKGPWAPEEDKLLVDYVQANGTGNWRML 411
Score = 33.0 bits (67), Expect(2) = 7e-005
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + P++ +E +++ + GNK
Sbjct: 263 RCGKSCRLRWTNYLRPDIKRGPFTPEEHNSILQLHAIVGNK 141
>gb|CW433017.1|CW433017 fsbb001f148a21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148a21, DNA
sequence
Length = 723
Score = 33.5 bits (68), Expect(2) = 8e-005
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ HG +WR +
Sbjct: 169 KKGPWTPEEDQKLLAFIEEHGHGSWRAL 252
Score = 33.0 bits (67), Expect(2) = 8e-005
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + +S QEE +I+ + GN+
Sbjct: 350 RCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 472
>gb|CL179208.1|CL179208 104_388_10895151_148_31909_063 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895151, DNA
sequence
Length = 696
Score = 33.5 bits (68), Expect(2) = 8e-005
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L ++ HG +WR +
Sbjct: 657 KKGPWTPEEDQKLLAFIEEHGHGSWRAL 574
Score = 33.0 bits (67), Expect(2) = 8e-005
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + +S QEE +I+ + GN+
Sbjct: 476 RCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 354
>gb|CW283725.1|CW283725 104_760_11409398_148_35488_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11409398, DNA
sequence
Length = 667
Score = 35.7 bits (73), Expect(2) = 8e-005
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L +++HG NWR++
Sbjct: 246 KKGPWTPEEDIVLVSYIQQHGPGNWRSV 329
Score = 32.1 bits (65), Expect(2) = 8e-005
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R + SC RW L P I + ++ EE +I Q + GNK
Sbjct: 506 RCSKSCRLRWTNYLRPGIKRGNFTPHEEGIIIHLQALLGNK 628
>gb|CW389570.1|CW389570 fsbb001f074n04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074n04, DNA
sequence
Length = 534
Score = 33.9 bits (69), Expect(2) = 9e-005
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W EED+ L V+ +GT NWR +
Sbjct: 494 KKGPWPPEEDKLLVDYVQANGTGNWRML 411
Score = 33.5 bits (68), Expect(2) = 9e-005
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + P++ +E +++ + GNK
Sbjct: 263 RCGKSCRMRWPNYLRPDIKRGPFTPEEHNSILQLHAIVGNK 141
>gb|CW306377.1|CW306377 104_792_11466808_148_35716_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466808, DNA
sequence
Length = 760
Score = 34.8 bits (71), Expect(2) = 9e-005
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L V+ +GT NWR +
Sbjct: 421 KKGPWAPEEDKLLVDYVQANGTGNWRML 338
Score = 33.0 bits (67), Expect(2) = 9e-005
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + P++ +E +++ + GNK
Sbjct: 190 RCGKSCRLRWTNYLRPDIKRGPFTPEEHNSILQLHAIVGNK 68
>gb|CW406582.1|CW406582 fsbb001f099k13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f099k13, DNA
sequence
Length = 461
Score = 47.8 bits (100), Expect = 1e-004
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
K W++++++ LI+A + GN W + PGR+ +A+K HW
Sbjct: 133 KTLWTEEDDMALIKAHKRCGNHWSTIATFLPGRSENAVKNHW 258
Score = 31.7 bits (64), Expect = 8.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1 / +1
Query: 289 SEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRW 402
+EED+ + +W TIA +PGR+ N+ + W
Sbjct: 145 TEEDDMALIKAHKRCGNHWSTIATFLPGRSENAVKNHW 258
>gb|BF481215.1|BF481215 FM1_17_A03.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 382
Score = 33.9 bits (69), Expect(2) = 1e-004
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMV 510
R+ SC RW L P+ SQQEE +I +GN++ +V
Sbjct: 34 RSGKSCRMRWVNYLHPSRKHGRLSQQEERLVIELHARWGNRFVSIV 171
Score = 31.2 bits (63), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 496 WCKMVKHFPGRTNDALKEHWK 558
W ++ + PGRT++ +K +WK
Sbjct: 274 WSRIARRLPGRTDNDIKNYWK 336
>gb|AF470063.1| Sorghum bicolor P-type R2R3 Myb protein (Myb5) gene, partial cds
Length = 1117
Score = 33.0 bits (67), Expect(2) = 1e-004
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + + +S QEE ++ + GN++ H
Sbjct: 553 RCGKSCRLRWINYLRPDLKRGAFSPQEEELIVSLHAILGNRYLTRAAH 696
Score = 32.6 bits (66), Expect(2) = 1e-004
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++++K +K WS EEDE L + R G +W +A
Sbjct: 430 AAATKLRKGLWSPEEDERLVAYMLRSGQGSWSDVA 534
>gb|CW408645.1|CW408645 fsbb001f102j23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102j23, DNA
sequence
Length = 763
Score = 34.4 bits (70), Expect(2) = 1e-004
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMV 510
R+ SC RW L P+ SQQEE +I +GN++ +V
Sbjct: 576 RSGKSCRMRWVNYLHPSRKHGRLSQQEERLVIELHSRWGNRFVSIV 439
Score = 31.2 bits (63), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 496 WCKMVKHFPGRTNDALKEHWK 558
W ++ + PGRT++ +K +WK
Sbjct: 327 WSRIARRLPGRTDNDIKNYWK 265
>gb|CW218707.1|CW218707 104_652_11196333_116_37460_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196333, DNA
sequence
Length = 716
Score = 34.4 bits (70), Expect(2) = 1e-004
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMV 510
R+ SC RW L P+ SQQEE +I +GN++ +V
Sbjct: 188 RSGKSCRMRWVNYLHPSRKHGRLSQQEERLVIELHSRWGNRFVSIV 325
Score = 31.2 bits (63), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 496 WCKMVKHFPGRTNDALKEHWK 558
W ++ + PGRT++ +K +WK
Sbjct: 437 WSRIARRLPGRTDNDIKNYWK 499
>gb|CW161765.1|CW161765 104_568_11150585_148_36434_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150585, DNA
sequence
Length = 716
Score = 33.0 bits (67), Expect(2) = 1e-004
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + + +S QEE ++ + GN++ H
Sbjct: 388 RCGKSCRLRWINYLRPDLKRGAFSPQEEELIVSLHAILGNRYLTRAAH 531
Score = 32.6 bits (66), Expect(2) = 1e-004
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++++K +K WS EEDE L + R G +W +A
Sbjct: 265 AAATKLRKGLWSPEEDERLVAYMLRSGQGSWSDVA 369
>gb|CW408644.1|CW408644 fsbb001f102j23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102j23, DNA
sequence
Length = 711
Score = 34.4 bits (70), Expect(2) = 1e-004
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMV 510
R+ SC RW L P+ SQQEE +I +GN++ +V
Sbjct: 251 RSGKSCRMRWVNYLHPSRKHGRLSQQEERLVIELHSRWGNRFVSIV 388
Score = 31.2 bits (63), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 496 WCKMVKHFPGRTNDALKEHWK 558
W ++ + PGRT++ +K +WK
Sbjct: 500 WSRIARRLPGRTDNDIKNYWK 562
>gb|CW172701.1|CW172701 104_584_11156431_148_36546_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156431, DNA
sequence
Length = 679
Score = 34.4 bits (70), Expect(2) = 1e-004
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMV 510
R+ SC RW L P+ SQQEE +I +GN++ +V
Sbjct: 188 RSGKSCRMRWVNYLHPSRKHGRLSQQEERLVIELHSRWGNRFVSIV 325
Score = 31.2 bits (63), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 496 WCKMVKHFPGRTNDALKEHWK 558
W ++ + PGRT++ +K +WK
Sbjct: 437 WSRIARRLPGRTDNDIKNYWK 499
>gb|CW260485.1|CW260485 104_727_11228990_148_35200_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228990, DNA
sequence
Length = 634
Score = 34.4 bits (70), Expect(2) = 1e-004
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMV 510
R+ SC RW L P+ SQQEE +I +GN++ +V
Sbjct: 172 RSGKSCRMRWVNYLHPSRKHGRLSQQEERLVIELHSRWGNRFVSIV 309
Score = 31.2 bits (63), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 496 WCKMVKHFPGRTNDALKEHWK 558
W ++ + PGRT++ +K +WK
Sbjct: 421 WSRIARRLPGRTDNDIKNYWK 483
>gb|CW247980.1|CW247980 104_709_11222049_148_35027_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222049, DNA
sequence
Length = 675
Score = 33.9 bits (69), Expect(2) = 2e-004
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+++ED+ L VK HG WR +
Sbjct: 517 KRGAWTAKEDDVLAAYVKAHGEGKWREV 434
Score = 33.0 bits (67), Expect(2) = 2e-004
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
R SC RW L P I + S EE +IR ++ GN+ +V+ GR
Sbjct: 268 RCGKSCRLRWLNYLRPNIKRGNISYDEEDLIIRLHKLLGNRSVSVVRAGGGR 113
>gb|CW189916.1|CW189916 104_611_11174220_116_36748_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174220, DNA
sequence
Length = 157
Score = 47.4 bits (99), Expect = 2e-004
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1 / +3
Query: 424 INKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+ K+ WS +E++ LI+A + G+KW ++ K P RT +++K H
Sbjct: 27 MQKDIWSDEEDMDLIQAHKEVGDKWAEIAKRLPRRTENSIKIH 155
>gb|CF074455.1|CF074455 FE1_24_A11.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_A11_A002 5', mRNA sequence
Length = 691
Score = 33.9 bits (69), Expect(2) = 2e-004
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + +HG W T+
Sbjct: 251 KLRKGLWSPEEDEKLMNHITKHGHGCWSTV 340
Score = 32.6 bits (66), Expect(2) = 2e-004
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +SQ+EE +I V GN+
Sbjct: 487 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNR 609
>gb|CW187951.1|CW187951 104_607_11172759_116_36725_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172759, DNA
sequence
Length = 670
Score = 46.9 bits (98), Expect = 2e-004
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K P+ +E ++IR ++GNKW KM H
Sbjct: 642 RCGKSCRLRWANHLRPDLKKGPFDAEEVDKIIRFHIMWGNKWAKMASH 499
>gb|CW427204.1|CW427204 fsbb001f139b08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f139b08, DNA
sequence
Length = 671
Score = 28.6 bits (57), Expect(3) = 4e-004
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1 / -1
Query: 493 KWCKMVKHFPGRTNDALK 546
+W K+ H PGRT++ +K
Sbjct: 56 RWSKIASHLPGRTDNEIK 3
Score = 28.1 bits (56), Expect(3) = 4e-004
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED+ L + +G WR +
Sbjct: 558 KKGPWTAEEDQKLVSFILGNGQCCWRAV 475
Score = 25.4 bits (50), Expect(3) = 4e-004
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P + + S EE +I GN++
Sbjct: 289 RCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHAQLGNRY 164
>gb|CX618593.1|CX618593 GABR1_40_B10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_40_B10_A002 5', mRNA sequence
Length = 745
Score = 34.4 bits (70), Expect(2) = 4e-004
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
R SC RW L P + + + EE R++ +G++W ++
Sbjct: 611 RTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRI 745
Score = 31.2 bits (63), Expect(2) = 4e-004
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
S+ + +K W+ EEDE L + V+ G + W +A
Sbjct: 219 STPAAMRKGPWTDEEDEQLVRFVRLFGERRWDFLA 323
>gb|CW347400.1|CW347400 fsbb001f007e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f007e18, DNA
sequence
Length = 361
Score = 32.1 bits (65), Expect(2) = 4e-004
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1 / -1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P I + ++ EE +IR GNK+
Sbjct: 163 RCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 38
Score = 31.2 bits (63), Expect(2) = 4e-004
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 271 KKHRWSSEEDEALKQMVKRHG 333
KK W+ EED AL + ++RHG
Sbjct: 274 KKGPWTEEEDRALVEHIQRHG 212
>gb|CW283724.1|CW283724 104_760_11409398_116_35484_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11409398, DNA
sequence
Length = 595
Score = 33.0 bits (67), Expect(2) = 4e-004
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1 / -3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTI 354
W+ EED L +++HG NWR++
Sbjct: 587 WTPEEDIVLVSYIQQHGPGNWRSV 516
Score = 32.1 bits (65), Expect(2) = 4e-004
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / -2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R + SC RW L P I + ++ EE +I Q + GNK
Sbjct: 339 RCSKSCRLRWTNYLRPGIKRGNFTPHEEGIIIHLQALLGNK 217
>gb|CW051793.1|CW051793 104_292_10515365_114_30189 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515365, DNA
sequence
Length = 633
Score = 32.1 bits (65), Expect(2) = 5e-004
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1 / -2
Query: 352 IACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
+AC+ R+ SC RW L P + + + EE +++ + GN++ + H
Sbjct: 218 MACSGLRRSGKSCRLRWVNYLRPDLKRGKITPDEETVILQLHAMLGNRYVHVRTH 54
Score = 31.7 bits (64), Expect(2) = 5e-004
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1 / -3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W++ ED L + V++HG +W ++A
Sbjct: 418 RKGPWTALEDRLLTEYVQQHGEGSWNSVA 332
>gb|CW209992.1|CW209992 104_640_11189556_116_37000_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189556, DNA
sequence
Length = 669
Score = 33.0 bits (67), Expect(2) = 5e-004
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P I + +S QEE +I+ + GN+
Sbjct: 133 RCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 11
Score = 32.1 bits (65), Expect(2) = 5e-004
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1 / -2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L +++HG WR++
Sbjct: 380 KKGPWTPEEDQKLLAYIEQHGHGCWRSL 297
>gb|CW174572.1|CW174572 104_586_11157479_116_36558_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157479, DNA
sequence
Length = 576
Score = 45.6 bits (95), Expect = 6e-004
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1 / -3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW + P + K P+ +E ++IR ++GNKW KM H
Sbjct: 550 RCGKSCRLRWANHVRPDLKKGPFDAEEVDKIIRFHIMWGNKWAKMASH 407
>gb|CW419931.1|CW419931 fsbb001f126a07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f126a07, DNA
sequence
Length = 705
Score = 32.1 bits (65), Expect(2) = 6e-004
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P I + ++ EE +IR GNK+
Sbjct: 550 RCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 675
Score = 31.2 bits (63), Expect(2) = 6e-004
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHG 333
KK W+ EED AL + ++RHG
Sbjct: 439 KKGPWTEEEDRALVEHIQRHG 501
>gb|CW203051.1|CW203051 104_629_11185423_148_36910_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185423, DNA
sequence
Length = 651
Score = 32.1 bits (65), Expect(2) = 6e-004
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKW 498
R SC RW L P I + ++ EE +IR GNK+
Sbjct: 492 RCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 617
Score = 31.2 bits (63), Expect(2) = 6e-004
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHG 333
KK W+ EED AL + ++RHG
Sbjct: 381 KKGPWTEEEDRALVEHIQRHG 443
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.311 0.125 0.383
Matrix: BLOSUM62
Number of Hits to DB: 773,641,875
Number of Sequences: 832831
Number of extensions: 11464187
Number of successful extensions: 99303
Number of sequences better than 10.0: 646
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 15337510630
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 0 ( 0.0 bits)
S1: 42 (21.8 bits)