TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL6b07.xg.2.1
(644 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW316355.1|CW316355 104_807_11472851_116_35842_036 Sorgh... 355 3e-096
gb|CW217296.1|CW217296 104_650_11195581_148_37130_055 Sorgh... 182 4e-074
gb|CW324354.1|CW324354 104_818_11477117_116_35904_017 Sorgh... 182 4e-074
gb|CL171423.1|CL171423 104_373_10889416_148_31776_088 Sorgh... 151 1e-067
gb|CW040454.1|CW040454 104_273_10506161_114_30265 Sorghum m... 182 3e-054
gb|AW745956.1|AW745956 WS1_38_B07.g1_A002 Water-stressed 1 ... 185 1e-045
gb|CW076696.1|CW076696 104_373_10889416_116_31777_088 Sorgh... 96 2e-045
gb|CW107325.1|CW107325 104_477_11096522_148_34473_007 Sorgh... 99 4e-044
gb|CW217295.1|CW217295 104_650_11195581_116_37129_055 Sorgh... 104 7e-044
gb|CW309446.1|CW309446 104_798_11469200_116_35734_028 Sorgh... 142 3e-040
gb|CW089349.1|CW089349 104_434_10948660_114_32602_004 Sorgh... 97 8e-040
gb|CW262007.1|CW262007 104_729_11229818_148_35206_009 Sorgh... 120 2e-039
gb|CW107324.1|CW107324 104_477_11096522_116_34477_007 Sorgh... 164 2e-039
gb|CW324355.1|CW324355 104_818_11477117_148_35908_017 Sorgh... 128 2e-035
gb|CL168136.1|CL168136 104_365_10810586_114_31804_266 Sorgh... 144 2e-033
gb|CN135637.1|CN135637 OX1_38_C08.b1_A002 Oxidatively-stres... 117 5e-033
gb|CW168734.1|CW168734 104_578_11154305_148_36600_071 Sorgh... 113 3e-032
gb|CW784741.1|CW784741 SP__Ba0002M01.f SP__Ba Sorghum propi... 92 2e-031
gb|CW385505.1|CW385505 fsbb001f069a06k0 Sorghum methylation... 92 2e-031
gb|CW167484.1|CW167484 104_576_11153628_148_36679_036 Sorgh... 92 2e-031
gb|CW281298.1|CW281298 104_756_11408099_148_35455_034 Sorgh... 92 2e-031
gb|CX612716.1|CX612716 GABR1_4_C04.b1_A002 GA- or brassinol... 126 2e-031
gb|BZ691140.1|BZ691140 SP__Ba0002M01.f SP__Ba Sorghum propi... 92 1e-030
gb|CW421212.1|CW421212 fsbb001f128o20f0 Sorghum methylation... 128 1e-030
gb|BI074560.1|BI074560 IP1_13_A11.b1_A002 Immature pannicle... 123 1e-030
gb|AW284352.2|AW284352 LG1_275_D12.g1_A002 Light Grown 1 (L... 119 4e-030
gb|CW417882.1|CW417882 fsbb001f121b13k0 Sorghum methylation... 133 5e-030
gb|CW309447.1|CW309447 104_798_11469200_148_35742_028 Sorgh... 119 7e-030
gb|CW234831.1|CW234831 104_688_11214253_148_37386_049 Sorgh... 113 9e-030
gb|CW326585.1|CW326585 104_822_11478294_148_35969_031 Sorgh... 132 1e-029
gb|CW212186.1|CW212186 104_643_11190891_116_37022_012 Sorgh... 121 2e-029
gb|BE367090.1|BE367090 PI1_42_C12.g2_A002 Pathogen induced ... 96 2e-029
gb|CW377275.1|CW377275 fsbb001f055i11f0 Sorghum methylation... 116 2e-029
gb|CW326584.1|CW326584 104_822_11478294_116_35968_031 Sorgh... 122 3e-029
gb|CW383753.1|CW383753 fsbb001f066h01k0 Sorghum methylation... 119 4e-029
gb|CW326662.1|CW326662 104_822_11478336_148_35965_096 Sorgh... 130 5e-029
gb|CW074398.1|CW074398 104_347_10803474_114_31377_066 Sorgh... 110 8e-029
gb|CW269736.1|CW269736 104_740_11401968_148_35317_082 Sorgh... 118 1e-028
gb|CW269737.1|CW269737 104_740_11401968_148_36232_082 Sorgh... 118 1e-028
gb|CW407446.1|CW407446 fsbb001f100o22k0 Sorghum methylation... 110 2e-028
gb|CW203559.1|CW203559 104_631_11186083_116_37092_076 Sorgh... 99 2e-028
gb|CW149795.1|CW149795 104_549_11142687_148_36300_064 Sorgh... 99 2e-028
gb|CX612968.1|CX612968 GABR1_5_B04.g1_A002 GA- or brassinol... 115 2e-028
gb|CL171430.1|CL171430 104_373_10889420_116_31777_092 Sorgh... 119 3e-028
gb|CW071934.1|CW071934 104_324_10591951_116_30464 Sorghum m... 96 3e-028
gb|CW348198.1|CW348198 fsbb001f008h06k0 Sorghum methylation... 96 3e-028
gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complet... 87 3e-028
gb|BI140868.1|BI140868 IP1_40_B03.b1_A002 Immature pannicle... 87 3e-028
gb|CW276575.1|CW276575 104_750_11405564_116_35397_076 Sorgh... 85 5e-028
gb|CW112156.1|CW112156 104_485_11104730_116_34540_001 Sorgh... 114 5e-028
gb|CW486450.1|CW486450 fsbb001f249l07k0 Sorghum methylation... 106 1e-027
gb|CW365429.1|CW365429 fsbb001f037p11k0 Sorghum methylation... 113 1e-027
gb|CW358776.1|CW358776 fsbb001f026b21k0 Sorghum methylation... 113 1e-027
gb|BE356408.1|BE356408 DG1_125_A04.b1_A002 Dark Grown 1 (DG... 111 1e-027
gb|CW259508.1|CW259508 104_725_11228461_148_35178_049 Sorgh... 79 2e-027
gb|CW146077.1|CW146077 104_538_11138798_148_34981_049 Sorgh... 113 2e-027
gb|CW227376.1|CW227376 104_665_11205382_148_37225_083 Sorgh... 112 2e-027
gb|CW346915.1|CW346915 fsbb001f006j20f0 Sorghum methylation... 83 2e-027
gb|CW260861.1|CW260861 104_727_11229195_148_35201_004 Sorgh... 83 2e-027
gb|BF586029.1|BF586029 FM1_33_F10.b1_A003 Floral-Induced Me... 104 3e-027
gb|CW042740.1|CW042740 104_276_10507256_116_30489 Sorghum m... 100 3e-027
gb|CW058804.1|CW058804 104_301_10518945_114_30158 Sorghum m... 82 4e-027
gb|CW179664.1|CW179664 104_593_11160220_116_36626_002 Sorgh... 112 5e-027
gb|AW565461.1|AW565461 LG1_344_F11.g1_A002 Light Grown 1 (L... 113 6e-027
gb|CW202968.1|CW202968 104_629_11185381_148_36910_057 Sorgh... 111 9e-027
gb|AW925036.1|AW925036 WS1_74_F04.b1_A002 Water-stressed 1 ... 107 9e-027
gb|CW198073.1|CW198073 104_622_11182015_116_36829_022 Sorgh... 77 2e-026
gb|BZ341866.1|BZ341866 ic79b10.b1 WGS-SbicolorF (JM107 adap... 111 3e-026
gb|CW056626.1|CW056626 104_298_10517783_115_30157 Sorghum m... 108 3e-026
gb|CW285323.1|CW285323 104_762_11410269_148_35499_087 Sorgh... 87 4e-026
gb|CW479999.1|CW479999 fsbb001f238n01f0 Sorghum methylation... 77 4e-026
gb|CN149581.1|CN149581 WOUND1_63_D10.g1_A002 Wounded leaves... 63 4e-026
gb|CN151803.1|CN151803 WOUND1_77_F03.g1_A002 Wounded leaves... 113 4e-026
gb|CW189300.1|CW189300 104_610_11173891_116_37097_072 Sorgh... 87 4e-026
gb|CW208477.1|CW208477 104_638_11188693_116_36981_063 Sorgh... 87 4e-026
gb|CW209349.1|CW209349 104_639_11189193_116_37080_041 Sorgh... 83 9e-026
gb|CW151970.1|CW151970 104_553_11144236_116_36325_016 Sorgh... 83 1e-025
gb|CW091586.1|CW091586 104_453_10998640_116_33033_054 Sorgh... 110 1e-025
gb|CW055343.1|CW055343 104_296_10517039_114_30174 Sorghum m... 118 2e-025
gb|CW078152.1|CW078152 104_389_10895679_148_31907_207 Sorgh... 118 2e-025
gb|CW182933.1|CW182933 104_598_11164343_148_36664_086 Sorgh... 118 2e-025
gb|BZ340551.1|BZ340551 ic39e11.g1 WGS-SbicolorF (JM107 adap... 85 2e-025
gb|BG322879.1|BG322879 EM1_15_C05.b1_A002 Embryo 1 (EM1) So... 107 2e-025
gb|CW118529.1|CW118529 104_495_11108261_116_34624_029 Sorgh... 76 2e-025
gb|CW310194.1|CW310194 104_799_11469589_116_35745_059 Sorgh... 96 4e-025
gb|CW152328.1|CW152328 104_553_11144431_148_36329_024 Sorgh... 97 5e-025
gb|CW305843.1|CW305843 104_791_11466522_148_36276_075 Sorgh... 105 5e-025
gb|CW135512.1|CW135512 104_520_11117888_148_34835_030 Sorgh... 83 9e-025
gb|CX610479.1|CX610479 ANR1_19_B01.b1_A002 Anaerobic roots ... 64 1e-024
gb|CN141534.1|CN141534 OX1_52_F08.b1_A002 Oxidatively-stres... 108 2e-024
gb|CW460643.1|CW460643 fsbb001f207o21f0 Sorghum methylation... 105 2e-024
gb|CW266446.1|CW266446 104_736_11232431_148_35287_094 Sorgh... 105 2e-024
gb|BE597509.1|BE597509 PI1_70_D09.b1_A002 Pathogen induced ... 72 2e-024
gb|CW300139.1|CW300139 104_783_11463491_148_36250_042 Sorgh... 103 2e-024
gb|AA738545.1|AA738545 SbRLK3 Sorghum bicolor cv. TX430 lea... 95 3e-024
gb|CW160627.1|CW160627 104_567_11149987_116_36415_076 Sorgh... 73 3e-024
gb|CW082231.1|CW082231 104_423_10943387_114_32325_040 Sorgh... 105 3e-024
gb|BF587221.1|BF587221 FM1_33_F10.b2_A003 Floral-Induced Me... 94 3e-024
gb|CW068017.1|CW068017 104_316_10524767_115_30145 Sorghum m... 113 4e-024
gb|CW033034.1|CW033034 104_262_10501727_115_30362 Sorghum m... 109 4e-024
gb|CW250177.1|CW250177 104_712_11223245_116_35052_027 Sorgh... 113 5e-024
gb|CW433928.1|CW433928 fsbb001f149g02f0 Sorghum methylation... 113 5e-024
gb|CN126982.1|CN126982 RHOH1_20_G06.b1_A002 Acid- and alkal... 105 6e-024
gb|CW075061.1|CW075061 104_354_10806335_114_31830_239 Sorgh... 105 6e-024
gb|CW392917.1|CW392917 fsbb001f079m03k0 Sorghum methylation... 105 6e-024
gb|CF755727.1|CF755727 DSAF1_1_B09.b1_A011 Drought-stressed... 77 6e-024
gb|CW074463.1|CW074463 104_348_10803808_116_31380_016 Sorgh... 108 8e-024
gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete seq... 102 1e-023
gb|CW192987.1|CW192987 104_615_11179322_116_36776_005 Sorgh... 102 1e-023
gb|BZ336703.1|BZ336703 hz38f03.g1 WGS-SbicolorF (JM107 adap... 109 1e-023
gb|AA738544.1|AA738544 SbRLK2 Sorghum bicolor cv. TX430 lea... 92 1e-023
gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 100 1e-023
gb|CW300453.1|CW300453 104_783_11463667_148_36246_066 Sorgh... 102 2e-023
gb|BZ691529.1|BZ691529 SP__Ba0009J24.f SP__Ba Sorghum propi... 100 2e-023
gb|CW212258.1|CW212258 104_643_11190928_116_37021_058 Sorgh... 101 2e-023
gb|CW222068.1|CW222068 104_657_11202181_148_37175_057 Sorgh... 81 4e-023
gb|CW219101.1|CW219101 104_653_11196548_148_37139_080 Sorgh... 81 4e-023
gb|CF070588.1|CF070588 FE1_1_C06.b1_A002 Iron-deficient see... 101 4e-023
gb|CW145759.1|CW145759 104_538_11138635_116_34978_074 Sorgh... 81 4e-023
gb|CW204246.1|CW204246 104_632_11186440_148_36923_062 Sorgh... 110 5e-023
gb|CW039120.1|CW039120 104_271_10505314_115_30388 Sorghum m... 83 5e-023
gb|CW393659.1|CW393659 fsbb001f080n04f0 Sorghum methylation... 105 5e-023
gb|CW310195.1|CW310195 104_799_11469589_148_35749_059 Sorgh... 96 7e-023
gb|CW258866.1|CW258866 104_724_11228109_148_35168_081 Sorgh... 96 7e-023
gb|CW191093.1|CW191093 104_613_11178317_116_36939_031 Sorgh... 83 7e-023
gb|CW229929.1|CW229929 104_671_11207578_116_37268_039 Sorgh... 98 1e-022
gb|CW394873.1|CW394873 fsbb001f082k19k0 Sorghum methylation... 95 2e-022
gb|BG241416.1|BG241416 RHIZ2_51_F11.g1_A003 Rhizome2 (RHIZ2... 108 2e-022
gb|CW308199.1|CW308199 104_796_11468541_148_35740_087 Sorgh... 85 2e-022
gb|CW486445.1|CW486445 fsbb001f249l04f0 Sorghum methylation... 97 2e-022
gb|CW392895.1|CW392895 fsbb001f079l14k0 Sorghum methylation... 99 2e-022
gb|CX621944.1|CX621944 GABR1_61_D01.b2_A002 GA- or brassino... 66 3e-022
gb|CW266955.1|CW266955 104_736_11232716_148_35288_066 Sorgh... 70 5e-022
gb|CW220785.1|CW220785 104_655_11197546_148_37155_037 Sorgh... 67 5e-022
gb|CW274173.1|CW274173 104_747_11404288_116_35375_064 Sorgh... 52 5e-022
gb|CW076668.1|CW076668 104_372_10889299_148_31778_355 Sorgh... 65 6e-022
gb|CW304646.1|CW304646 104_789_11465891_148_35707_038 Sorgh... 65 6e-022
gb|BF588141.1|BF588141 FM1_38_C05.b1_A003 Floral-Induced Me... 65 7e-022
gb|CW227416.1|CW227416 104_665_11205405_148_37228_083 Sorgh... 95 7e-022
gb|CW443886.1|CW443886 fsbb001f164d13k0 Sorghum methylation... 62 9e-022
gb|CF759894.1|CF759894 DSAF1_52_F07.b1_A011 Drought-stresse... 100 9e-022
gb|CF760562.1|CF760562 DSAF1_62_G12.b1_A011 Drought-stresse... 105 1e-021
gb|CW191302.1|CW191302 104_613_11178422_148_36941_059 Sorgh... 95 1e-021
gb|CW329914.1|CW329914 104_826_11480096_148_35997_022 Sorgh... 95 1e-021
gb|CW248654.1|CW248654 104_710_11222416_148_35034_062 Sorgh... 94 1e-021
gb|CW128773.1|CW128773 104_510_11114197_148_34754_055 Sorgh... 97 1e-021
gb|CW221161.1|CW221161 104_656_11197750_148_37170_093 Sorgh... 97 2e-021
gb|CX609056.1|CX609056 ANR1_10_H10.b1_A002 Anaerobic roots ... 105 2e-021
gb|CW244009.1|CW244009 104_704_11220357_116_37577_083 Sorgh... 97 2e-021
gb|CW117357.1|CW117357 104_493_11107614_116_34617_025 Sorgh... 84 2e-021
gb|CW164288.1|CW164288 104_572_11151909_148_36462_091 Sorgh... 97 2e-021
gb|CW464000.1|CW464000 fsbb001f213a03f0 Sorghum methylation... 104 2e-021
gb|BE918668.1|BE918668 FM1_1_A11.g1_A003 Floral-Induced Mer... 104 2e-021
gb|CW079261.1|CW079261 104_399_10899637_114_32392_051 Sorgh... 96 2e-021
gb|BI245910.1|BI245910 IP1_65_B03.b1_A002 Immature pannicle... 70 2e-021
gb|BE592541.1|BE592541 WS1_94_D12.b1_A002 Water-stressed 1 ... 64 2e-021
gb|BE918959.1|BE918959 FM1_2_C11.b1_A003 Floral-Induced Mer... 70 2e-021
gb|CW043987.1|CW043987 104_279_10508690_115_30245 Sorghum m... 68 2e-021
gb|CN135970.1|CN135970 OX1_40_B09.b1_A002 Oxidatively-stres... 95 3e-021
gb|CW079262.1|CW079262 104_399_10899637_116_32396_051 Sorgh... 96 3e-021
gb|CW234739.1|CW234739 104_688_11214195_148_37386_004 Sorgh... 88 3e-021
gb|CW316315.1|CW316315 104_807_11472830_148_35845_051 Sorgh... 64 4e-021
gb|CW151222.1|CW151222 104_551_11143823_116_36311_082 Sorgh... 103 4e-021
gb|CW279882.1|CW279882 104_754_11407318_148_35438_081 Sorgh... 103 4e-021
gb|CW500862.1|CW500862 fsbb001f296g09f0 Sorghum methylation... 103 4e-021
gb|CW073571.1|CW073571 104_337_10780440_116_31368_072 Sorgh... 93 4e-021
gb|CW444368.1|CW444368 fsbb001f164o22f0 Sorghum methylation... 66 5e-021
gb|CN126073.1|CN126073 RHOH1_15_B03.b1_A002 Acid- and alkal... 65 5e-021
gb|BE363874.1|BE363874 PI1_10_D09.b1_A002 Pathogen induced ... 64 6e-021
gb|CW319957.1|CW319957 104_812_11474756_116_35887_068 Sorgh... 97 6e-021
gb|CW328191.1|CW328191 104_824_11479163_148_35984_044 Sorgh... 95 6e-021
gb|CW030524.1|CW030524 104_258_10500287_116_30404 Sorghum m... 57 7e-021
gb|BZ337034.1|BZ337034 ia84g07.g1 WGS-SbicolorF (JM107 adap... 102 7e-021
gb|CW076575.1|CW076575 104_371_10813975_116_31791_295 Sorgh... 102 7e-021
gb|CW377086.1|CW377086 fsbb001f055e01f0 Sorghum methylation... 102 7e-021
gb|CW078437.1|CW078437 104_393_10897062_148_31921_054 Sorgh... 92 8e-021
gb|CD210349.1|CD210349 HS1_50_A12.g1_A012 Heat-shocked seed... 59 8e-021
gb|CW417478.1|CW417478 fsbb001f120i06k0 Sorghum methylation... 62 1e-020
gb|BZ691939.1|BZ691939 SP__Ba0014I01.r SP__Ba Sorghum propi... 84 1e-020
>gb|CW316355.1|CW316355 104_807_11472851_116_35842_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472851, DNA
sequence
Length = 679
Score = 355 bits (769), Expect = 3e-096
Identities = 153/175 (87%), Positives = 157/175 (89%)
Frame = +2 / -2
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
AVEIIHRDVKTNNILLDNS HVKVADFGLSRL PPEVTHVSTVPQGTPGYVDPVYHQCYK
Sbjct: 678 AVEIIHRDVKTNNILLDNSXHVKVADFGLSRLCPPEVTHVSTVPQGTPGYVDPVYHQCYK 499
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
LTEKSDVYSFGVVLVEL+SSKPAVDM RSHS+INLANMALNRIQNHEV QLVDPELGY+T
Sbjct: 498 LTEKSDVYSFGVVLVELISSKPAVDMTRSHSDINLANMALNRIQNHEVDQLVDPELGYKT 319
Query: 440 DGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRIXNGDSLENNXTDRSXS 604
D ETKKSIDLVAELAF+CLQLERDSRPSM VVE LN I NGDS E S S
Sbjct: 318 DDETKKSIDLVAELAFQCLQLERDSRPSMKEVVETLNCIKNGDSPETKMDKTSSS 154
Score = 218 bits (471), Expect = 6e-056
Identities = 97/162 (59%), Positives = 116/162 (71%)
Frame = -2 / +1
Query: 568 IPVXDTVQGLHHXXHRRP*IPF*LQAPERQLSDEIYGFLRLTVSLVPELRVDQLAHLVVL 389
IP+ DTV+GLH+ H RP*IPF*LQ + QLS+EIY FL +SLVPELRV+QL VVL
Sbjct: 190 IPILDTVEGLHYFLH*RP*IPF*LQTLKCQLSNEIYRFLCFIISLVPELRVNQLIDFVVL 369
Query: 388 DSVESHVGQVDLAVAPAHVDGWLRGHELDQHDAEXXXXXXXXXXXXXXVHRVDVARRALW 209
+SVESHVGQV++AVAP HV+ W RG+E DQ D E +H VD+A ALW
Sbjct: 370 NSVESHVGQVNIAVAPGHVNSWFRGYEFDQDDTEAVHIALLS*LVALVIHWVDIAWCALW 549
Query: 208 DGRHVGDFRRVQARQPKVGDLHVEAVVQQYVVGLHVTVYDLD 83
D ++GDFRR QA QPKV + V AVVQQYVVGL++TVYD D
Sbjct: 550 DS*YMGDFRRAQA*QPKVRNFDVXAVVQQYVVGLNITVYDFD 675
Score = 214 bits (461), Expect(2) = 7e-067
Identities = 93/103 (90%), Positives = 96/103 (93%)
Frame = -3 / +2
Query: 387 ILLRAMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCG 208
ILLRAMLA+LISLWLL MSTAGLED SST TTPKLYTSLFSVSL*HW YTGST*PGVPCG
Sbjct: 371 ILLRAMLAKLISLWLLVMSTAGLEDMSSTKTTPKLYTSLFSVSL*HW*YTGST*PGVPCG 550
Query: 207 TVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRCMISTA 79
TVDTWVTSGG+RRD+PKSAT T KLLSSSMLLV TSRCMISTA
Sbjct: 551 TVDTWVTSGGHRRDNPKSATLTXKLLSSSMLLVLTSRCMISTA 679
Score = 121 bits (258), Expect(2) = 2e-048
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +3 / -3
Query: 342 GATARSTWPTWLSTESRTTRWASWSTLSSGTRLTVRRRNP*ISSLSWRSGACS*KGIHGR 521
GATA TWPTWLSTE RTT+ +W TLSSGTRL +++RN *IS LSW CS*KGIHGR
Sbjct: 416 GATAILTWPTWLSTEFRTTKSINWLTLSSGTRLMMKQRNR*ISLLSWHFSVCS*KGIHGR 237
Query: 522 R*XKWWRP*TVSXTGIHWRI 581
+* K WRP TVS GI R+
Sbjct: 236 Q*RK*WRPSTVSRMGIPQRL 177
Score = 102 bits (217), Expect(2) = 4e-041
Identities = 46/76 (60%), Positives = 49/76 (64%)
Frame = -1 / +3
Query: 569 NPRX*YXXXXXXXXXSTAVNPFLAASTGTPAQRRDLWISSSHRQSRTRAQGRPAGPPRGS 390
NP *Y TAVNPFLAA+T P Q+RDL IS H QS TRAQG+P RGS
Sbjct: 189 NPHS*YS*GSPLLPSLTAVNPFLAANTEMPTQQRDLSISLFHHQSCTRAQGQPVDRLRGS 368
Query: 389 GFC*EPCWPG*SRCGS 342
FC*EPCWP * RCGS
Sbjct: 369 EFC*EPCWPS*YRCGS 416
Score = 93.2 bits (197), Expect(2) = 2e-048
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +1 / -1
Query: 85 RDHTP*REDQQHTAGQQLPREGRRLWAVAPVPS*SHPRVDRPTGHAGLRRPGVPPVLQAD 264
R+HTP* DQQHTAGQQL R+ LW V PVPS*SHP ++ PTGH L RP V PVLQA+
Sbjct: 673 RNHTP*C*DQQHTAGQQLXRQSCGLWVVTPVPS*SHPCINCPTGHTRLCRPSVSPVLQAN 494
Score = 87.2 bits (184), Expect(2) = 4e-041
Identities = 37/56 (66%), Positives = 39/56 (69%)
Frame = -1 / +3
Query: 251 TGGTPGRRSPACPVGRSTRG*LQEGTGATAQSRRPSRGSCCPAVCCWSSRHGV*SR 84
TG T GR S CPVG+ G*LQEGTG T QS + R SCCPAVCCWS HGV* R
Sbjct: 507 TGDTLGRHSLVCPVGQLIHG*LQEGTGVTTQSPQL*RXSCCPAVCCWS*HHGV*FR 674
Score = 61.6 bits (128), Expect(2) = 7e-067
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -3 / +2
Query: 564 PXXIRFRASTTXXIDGRESLSSCKHRNASSATRSMD 457
P I+ R STT IDGRESLSSCKH NA+SATRS+D
Sbjct: 194 PFLIQLRVSTTSFIDGRESLSSCKH*NANSATRSID 301
>gb|CW217296.1|CW217296 104_650_11195581_148_37130_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195581, DNA
sequence
Length = 656
Score = 182 bits (392), Expect(3) = 4e-074
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2 / +1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVKTNNILLD +FHVKVADFGLSRL+P THVST PQGTPGY+DP+YHQCY+LT
Sbjct: 184 QVVHRDVKTNNILLDAAFHVKVADFGLSRLFPAHATHVSTAPQGTPGYLDPMYHQCYQLT 363
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRS 346
+KSDVYSFGVVLVEL+SSKPAVDM R+
Sbjct: 364 DKSDVYSFGVVLVELISSKPAVDMSRA 444
Score = 143 bits (306), Expect(3) = 6e-052
Identities = 60/81 (74%), Positives = 62/81 (76%)
Frame = -3 / -1
Query: 336 MSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDTWVTSGGYRRDSPK 157
MSTAGLE+ SSTSTTPKLYTSL SVS *HWWY GS PGVPCG VDT V G R+ PK
Sbjct: 434 MSTAGLEEMSSTSTTPKLYTSLLSVSW*HWWYMGSRYPGVPCGAVDTCVACAGNSRERPK 255
Query: 156 SATFTWKLLSSSMLLVFTSRC 94
SATFTW S MLLVFTSRC
Sbjct: 254 SATFTWNAASRRMLLVFTSRC 192
Score = 95.9 bits (203), Expect(3) = 4e-074
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +2 / +1
Query: 353 EINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXX 532
++NLA MA++ IQ +E+ +LVDP +GY TDG TK+++DLVAE+AFRCLQ E+D RP +
Sbjct: 454 DVNLATMAVHMIQCYEIDRLVDPRIGYRTDGGTKRAVDLVAEMAFRCLQPEQDVRPPISE 633
Query: 533 VVEAL 547
V++AL
Sbjct: 634 VLDAL 648
Score = 78.5 bits (165), Expect(3) = 4e-026
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = -2 / -3
Query: 352 AVAPAHVDGWLRGHELDQHDAEXXXXXXXXXXXXXXVHRVDVARRALWDGRHVGDFRRVQ 173
A AHV G L G EL QHDAE VH V+V RAL HV RR Q
Sbjct: 450 AAGAAHVHGGLGGDELHQHDAEAVHVALVGELVALVVHGVEVPGRALRRRGHVRGVRREQ 271
Query: 172 ARQPKVGDLHVEAVVQQYVVGLHVTVYDLDRV 77
+ +VG LHVE VQ+ VVGLHV V+ L R+
Sbjct: 270 PGKAEVGHLHVERRVQEDVVGLHVAVHHLVRL 175
Score = 69.3 bits (145), Expect(3) = 6e-052
Identities = 34/70 (48%), Positives = 41/70 (58%)
Frame = -2 / -3
Query: 547 QGLHHXXHRRP*IPF*LQAPERQLSDEIYGFLRLTVSLVPELRVDQLAHLVVLDSVESHV 368
Q + H RP + LQAPER LSDE++G L V VP+ RV + LV LD V H
Sbjct: 648 QRVQHLADGRPDVLLRLQAPERHLSDEVHGALGPAVRPVPDPRVHEAVDLVALDHVHGHG 469
Query: 367 GQVDLAVAPA 338
GQVD+A A A
Sbjct: 468 GQVDVAAAGA 439
Score = 65.2 bits (136), Expect(3) = 3e-023
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1 / +3
Query: 97 P*REDQQHTAGQQLPREGRRLWAVAPVPS*SHPRVDRPTGHAGLRRPGVPPVLQA 261
P REDQQH G+ +PREG RL VP H RV GHA + RP VPPVL A
Sbjct: 195 PRREDQQHPPGRGVPREGGRLRPFPAVPGARHARVHGAAGHARVPRPHVPPVLPA 359
Score = 59.7 bits (124), Expect(3) = 3e-023
Identities = 31/67 (46%), Positives = 33/67 (49%)
Frame = +3 / +2
Query: 339 AGATARSTWPTWLSTESRTTRWASWSTLSSGTRLTVRRRNP*ISSLSWRSGACS*KGIHG 518
A A A STWP W T S TR + T SGT T P SSL WRSGACS G
Sbjct: 440 APAAATSTWPPWPCT*SSATRSTASWTRGSGTGRTAGPSAPWTSSLRWRSGACSRSRTSG 619
Query: 519 RR*XKWW 539
R + W
Sbjct: 620 RPSARCW 640
Score = 53.8 bits (111), Expect(3) = 4e-026
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = -1 / -2
Query: 509 PFLAASTGTPAQRRDLWISSSHRQSRTRAQGRPAGPPRGSGFC*EPCWPG*SR 351
P AA TGTP+QRR + S R S TR+ G G R +G C P WPG* R
Sbjct: 610 PAPAAGTGTPSQRRGPRRAWSRRPSGTRSAGPRGGRSRSTGSCARPWWPG*RR 452
Score = 42.8 bits (87), Expect(3) = 4e-074
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLHAVE 88
L+WP R+ IA+ETA AL YLH VE
Sbjct: 106 LSWPVRLGIAVETASALEYLHGVE 177
Score = 31.8 bits (63), Expect(3) = 6e-052
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 87 STAWRYASASAVSMAMLILRGH 22
ST WRY+SA AVS AM GH
Sbjct: 176 STPWRYSSALAVSTAMPRRTGH 111
Score = 24.4 bits (47), Expect(3) = 4e-026
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2 / -3
Query: 88 LDRVEVRQRLSCFYGDAHPSRPRE 17
L VEV QR +GDA PR+
Sbjct: 177 LHAVEVLQRARRLHGDAQADGPRQ 106
Score = 22.1 bits (42), Expect(3) = 3e-023
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1 / +3
Query: 22 VASKDEHRHRNS*GAGVPPR 81
VA HR + AGVPPR
Sbjct: 111 VARPPGHRRGDGERAGVPPR 170
>gb|CW324354.1|CW324354 104_818_11477117_116_35904_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477117, DNA
sequence
Length = 621
Score = 182 bits (392), Expect(3) = 4e-074
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2 / -1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVKTNNILLD +FHVKVADFGLSRL+P THVST PQGTPGY+DP+YHQCY+LT
Sbjct: 519 QVVHRDVKTNNILLDAAFHVKVADFGLSRLFPAHATHVSTAPQGTPGYLDPMYHQCYQLT 340
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRS 346
+KSDVYSFGVVLVEL+SSKPAVDM R+
Sbjct: 339 DKSDVYSFGVVLVELISSKPAVDMSRA 259
Score = 143 bits (306), Expect(3) = 6e-052
Identities = 60/81 (74%), Positives = 62/81 (76%)
Frame = -3 / +2
Query: 336 MSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDTWVTSGGYRRDSPK 157
MSTAGLE+ SSTSTTPKLYTSL SVS *HWWY GS PGVPCG VDT V G R+ PK
Sbjct: 269 MSTAGLEEMSSTSTTPKLYTSLLSVSW*HWWYMGSRYPGVPCGAVDTCVACAGNSRERPK 448
Query: 156 SATFTWKLLSSSMLLVFTSRC 94
SATFTW S MLLVFTSRC
Sbjct: 449 SATFTWNAASRRMLLVFTSRC 511
Score = 95.9 bits (203), Expect(3) = 4e-074
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +2 / -1
Query: 353 EINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXX 532
++NLA MA++ IQ +E+ +LVDP +GY TDG TK+++DLVAE+AFRCLQ E+D RP +
Sbjct: 249 DVNLATMAVHMIQCYEIDRLVDPRIGYRTDGGTKRAVDLVAEMAFRCLQPEQDVRPPISE 70
Query: 533 VVEAL 547
V++AL
Sbjct: 69 VLDAL 55
Score = 78.5 bits (165), Expect(3) = 4e-026
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = -2 / +1
Query: 352 AVAPAHVDGWLRGHELDQHDAEXXXXXXXXXXXXXXVHRVDVARRALWDGRHVGDFRRVQ 173
A AHV G L G EL QHDAE VH V+V RAL HV RR Q
Sbjct: 253 AAGAAHVHGGLGGDELHQHDAEAVHVALVGELVALVVHGVEVPGRALRRRGHVRGVRREQ 432
Query: 172 ARQPKVGDLHVEAVVQQYVVGLHVTVYDLDRV 77
+ +VG LHVE VQ+ VVGLHV V+ L R+
Sbjct: 433 PGKAEVGHLHVERRVQEDVVGLHVAVHHLVRL 528
Score = 69.3 bits (145), Expect(3) = 6e-052
Identities = 34/70 (48%), Positives = 41/70 (58%)
Frame = -2 / +1
Query: 547 QGLHHXXHRRP*IPF*LQAPERQLSDEIYGFLRLTVSLVPELRVDQLAHLVVLDSVESHV 368
Q + H RP + LQAPER LSDE++G L V VP+ RV + LV LD V H
Sbjct: 55 QRVQHLADGRPDVLLRLQAPERHLSDEVHGALGPAVRPVPDPRVHEAVDLVALDHVHGHG 234
Query: 367 GQVDLAVAPA 338
GQVD+A A A
Sbjct: 235 GQVDVAAAGA 264
Score = 65.2 bits (136), Expect(3) = 3e-023
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1 / -3
Query: 97 P*REDQQHTAGQQLPREGRRLWAVAPVPS*SHPRVDRPTGHAGLRRPGVPPVLQA 261
P REDQQH G+ +PREG RL VP H RV GHA + RP VPPVL A
Sbjct: 508 PRREDQQHPPGRGVPREGGRLRPFPAVPGARHARVHGAAGHARVPRPHVPPVLPA 344
Score = 59.7 bits (124), Expect(3) = 3e-023
Identities = 31/67 (46%), Positives = 33/67 (49%)
Frame = +3 / -2
Query: 339 AGATARSTWPTWLSTESRTTRWASWSTLSSGTRLTVRRRNP*ISSLSWRSGACS*KGIHG 518
A A A STWP W T S TR + T SGT T P SSL WRSGACS G
Sbjct: 263 APAAATSTWPPWPCT*SSATRSTASWTRGSGTGRTAGPSAPWTSSLRWRSGACSRSRTSG 84
Query: 519 RR*XKWW 539
R + W
Sbjct: 83 RPSARCW 63
Score = 53.8 bits (111), Expect(3) = 4e-026
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = -1 / +3
Query: 509 PFLAASTGTPAQRRDLWISSSHRQSRTRAQGRPAGPPRGSGFC*EPCWPG*SR 351
P AA TGTP+QRR + S R S TR+ G G R +G C P WPG* R
Sbjct: 93 PAPAAGTGTPSQRRGPRRAWSRRPSGTRSAGPRGGRSRSTGSCARPWWPG*RR 251
Score = 42.8 bits (87), Expect(3) = 4e-074
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / -1
Query: 17 LTWPRRMSIAIETAEALAYLHAVE 88
L+WP R+ IA+ETA AL YLH VE
Sbjct: 597 LSWPVRLGIAVETASALEYLHGVE 526
Score = 31.8 bits (63), Expect(3) = 6e-052
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / +2
Query: 87 STAWRYASASAVSMAMLILRGH 22
ST WRY+SA AVS AM GH
Sbjct: 527 STPWRYSSALAVSTAMPRRTGH 592
Score = 24.4 bits (47), Expect(3) = 4e-026
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2 / +1
Query: 88 LDRVEVRQRLSCFYGDAHPSRPRE 17
L VEV QR +GDA PR+
Sbjct: 526 LHAVEVLQRARRLHGDAQADGPRQ 597
Score = 22.1 bits (42), Expect(3) = 3e-023
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1 / -3
Query: 22 VASKDEHRHRNS*GAGVPPR 81
VA HR + AGVPPR
Sbjct: 592 VARPPGHRRGDGERAGVPPR 533
>gb|CL171423.1|CL171423 104_373_10889416_148_31776_088 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889416, DNA
sequence
Length = 604
Score = 151 bits (325), Expect(3) = 1e-067
Identities = 62/91 (68%), Positives = 78/91 (85%)
Frame = +2 / -2
Query: 227 YVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVG 406
YVDP YHQCY+LT++SDVYSFGVVLVEL+SSKPAVD+ R SEINLA MA+++IQ ++
Sbjct: 276 YVDPEYHQCYQLTDRSDVYSFGVVLVELISSKPAVDVTRDRSEINLAGMAIHKIQQCQLE 97
Query: 407 QLVDPELGYETDGETKKSIDLVAELAFRCLQ 499
QLVD +LGY +D T+K++ +VAELAFRCLQ
Sbjct: 96 QLVDLDLGYGSDEATRKAMTMVAELAFRCLQ 4
Score = 96.4 bits (204), Expect(3) = 1e-067
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +2 / -3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPG 226
++HRDVKT+NILLD +FHVKVADFGLSRL+P +VTHVST PQGTPG
Sbjct: 512 VVHRDVKTSNILLDANFHVKVADFGLSRLFPLDVTHVSTAPQGTPG 375
Score = 85.8 bits (181), Expect(3) = 7e-032
Identities = 39/71 (54%), Positives = 44/71 (61%)
Frame = -2 / +1
Query: 499 LQAPERQLSDEIYGFLRLTVSLVPELRVDQLAHLVVLDSVESHVGQVDLAVAPAHVDGWL 320
LQAPERQL D + R V VPE+ V QL L +LD V+ H GQVDLA HV G L
Sbjct: 4 LQAPERQLGDHRHRLPRRLVGAVPEVEVHQLLQLALLDLVDGHAGQVDLAAVAGHVHGGL 183
Query: 319 RGHELDQHDAE 287
R EL +HDAE
Sbjct: 184 RRDELHEHDAE 216
Score = 85.4 bits (180), Expect(3) = 3e-037
Identities = 37/59 (62%), Positives = 41/59 (69%)
Frame = -3 / +1
Query: 225 PGVPCGTVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRCMISTAWRYASASAVS 49
PGVPCG V+T VTS G RRDSPKSAT TWKL S MLLV TSRC + + ASA +
Sbjct: 376 PGVPCGAVETCVTSSGKRRDSPKSATLTWKLASRRMLLVLTSRCTTGGSTAWR*ASAAA 552
Score = 83.1 bits (175), Expect(3) = 3e-037
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = -3 / +2
Query: 387 ILLRAMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST 229
IL AM ARLISL STAG ++ SSTSTTPKLYTSL SVS *HWWY+GST
Sbjct: 116 ILWMAMPARLISLRSRVTSTAGFDEMSSTSTTPKLYTSLLSVSW*HWWYSGST 274
Score = 69.8 bits (146), Expect(3) = 2e-028
Identities = 30/50 (60%), Positives = 33/50 (66%)
Frame = +3 / -3
Query: 351 ARSTWPTWLSTESRTTRWASWSTLSSGTRLTVRRRNP*ISSLSWRSGACS 500
ARSTWP W ST S + W+SW T +SGT T RR * S SWRSGACS
Sbjct: 152 ARSTWPAWPSTRSSSASWSSWWTSTSGTAPTRRRGRR*RWSPSWRSGACS 3
Score = 68.0 bits (142), Expect(3) = 2e-022
Identities = 31/52 (59%), Positives = 35/52 (67%)
Frame = -1 / +3
Query: 500 AASTGTPAQRRDLWISSSHRQSRTRAQGRPAGPPRGSGFC*EPCWPG*SRCG 345
AA TGTPA+R SSS R+SRTR +G PA P +G C PC PG*SRCG
Sbjct: 3 AAGTGTPARRPSSSPSSSPRRSRTRGRGPPAAPAGTAGSCGWPCRPG*SRCG 158
Score = 64.8 bits (135), Expect(3) = 2e-028
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +1 / -2
Query: 79 RGRDHTP*REDQQHTAGQQLPREGRRLWAVAPVPS*SHPRVDRPTGHAGL 228
R P R+DQQH +QLPR+GRRL AV P+P+ H R+ RP GH G+
Sbjct: 522 RAARRAPRRQDQQHPPRRQLPRQGRRLRAVPPLPARRHARLHRPAGHPGV 373
Score = 57.0 bits (118), Expect(3) = 7e-032
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = -1 / +2
Query: 227 SPACPVGRSTRG*LQEGTGATAQSRRPSRGSCCPAVCCWSSRHG 96
+P CP GR R * + G G TA+SRRP RGS CCWS R G
Sbjct: 374 TPGCPAGRWRRA*RRAGRGGTARSRRP*RGSWRRGGCCWS*RRG 505
Score = 51.0 bits (105), Expect(3) = 1e-067
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / -3
Query: 5 SERGLTWPRRMSIAIETAEALAYLHAVE 88
+ER LTWP R+ +A+E A ALAYLHAVE
Sbjct: 602 AERALTWPLRLGVAVEAAAALAYLHAVE 519
Score = 49.6 bits (102), Expect(3) = 2e-022
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -2 / +3
Query: 241 HRVDVARRALWDGRHVGDFRRVQARQPKVGDLHVEAVVQQYVVGLHVTVYD 89
H ++ R AL G V D R +A QP+VGDL VE V++ V GL V V+D
Sbjct: 360 HGFNLPRGALRGGGDVRDVEREEAGQPEVGDLDVEVGVEEDVAGLDVAVHD 512
Score = 35.4 bits (71), Expect(3) = 7e-032
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 88 LDRVEVRQRLSCFYGDAHPSRPREAALR 5
LD VEV +R YGDA RP E ALR
Sbjct: 519 LDGVEVGERRGRLYGDAEAERPSERALR 602
Score = 31.8 bits (63), Expect(3) = 2e-028
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1 / -2
Query: 7 GARPHVASKDEHRHRNS*GAGVPPRGR 87
GAR H+A+ R R GA +PPR R
Sbjct: 600 GARAHLAAPPRRRRRGGRGARLPPRRR 520
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -3 / +1
Query: 87 STAWRYASASAVSMAMLILRGHVRPRS 7
STAWR ASA+A S A G V RS
Sbjct: 520 STAWR*ASAAAASTATPRRSGQVSARS 600
Score = 26.3 bits (51), Expect(3) = 3e-037
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +2
Query: 498 CKHRNASSAT 469
C+HRNASSAT
Sbjct: 5 CRHRNASSAT 34
>gb|CW040454.1|CW040454 104_273_10506161_114_30265 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506161, DNA
sequence
Length = 599
Score = 182 bits (392), Expect(3) = 3e-054
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2 / +1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVKTNNILLD +FHVKVADFGLSRL+P THVST PQGTPGY+DP+YHQCY+LT
Sbjct: 280 QVVHRDVKTNNILLDAAFHVKVADFGLSRLFPAHATHVSTAPQGTPGYLDPMYHQCYQLT 459
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRS 346
+KSDVYSFGVVLVEL+SSKPAVDM R+
Sbjct: 460 DKSDVYSFGVVLVELISSKPAVDMSRA 540
Score = 143 bits (306), Expect(3) = 6e-039
Identities = 60/81 (74%), Positives = 62/81 (76%)
Frame = -3 / -1
Query: 336 MSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCGTVDTWVTSGGYRRDSPK 157
MSTAGLE+ SSTSTTPKLYTSL SVS *HWWY GS PGVPCG VDT V G R+ PK
Sbjct: 530 MSTAGLEEMSSTSTTPKLYTSLLSVSW*HWWYMGSRYPGVPCGAVDTCVACAGNSRERPK 351
Query: 156 SATFTWKLLSSSMLLVFTSRC 94
SATFTW S MLLVFTSRC
Sbjct: 350 SATFTWNAASRRMLLVFTSRC 288
Score = 42.8 bits (87), Expect(3) = 3e-054
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLHAVE 88
L+WP R+ IA+ETA AL YLH VE
Sbjct: 202 LSWPVRLGIAVETASALEYLHGVE 273
Score = 31.8 bits (63), Expect(3) = 6e-039
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 87 STAWRYASASAVSMAMLILRGH 22
ST WRY+SA AVS AM GH
Sbjct: 272 STPWRYSSALAVSTAMPRRTGH 207
Score = 28.6 bits (56), Expect(3) = 3e-054
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3 / +2
Query: 339 AGATARSTWPTWLSTESRTTR 401
A A A STWP W T S TR
Sbjct: 536 APAAATSTWPPWPCT*SSATR 598
Score = 25.4 bits (49), Expect(3) = 6e-039
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -2
Query: 398 RGSGFC*EPCWPG*SR 351
R +G C P WPG* R
Sbjct: 595 RSTGSCARPWWPG*RR 548
>gb|AW745956.1|AW745956 WS1_38_B07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 627
Score = 185 bits (399), Expect = 1e-045
Identities = 77/120 (64%), Positives = 97/120 (80%)
Frame = +2 / +2
Query: 197 VSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMA 376
VST PQGTPGYVDP YHQCY+LT++SDVYSFGVVLVEL+SSKPAVD+ R SEINLA MA
Sbjct: 2 VSTAPQGTPGYVDPEYHQCYQLTDRSDVYSFGVVLVELISSKPAVDVTRDRSEINLAGMA 181
Query: 377 LNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
+++IQ ++ QLVD +LGY +D T+K++ +VAELAFRCLQ + RP + V++AL I
Sbjct: 182 IHKIQQCQLEQLVDLDLGYGSDEATRKAMTMVAELAFRCLQQNGEMRPPIKEVLDALRSI 361
Score = 104 bits (221), Expect(2) = 3e-027
Identities = 46/64 (71%), Positives = 50/64 (78%)
Frame = -3 / -1
Query: 387 ILLRAMLARLISLWLLPMSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCG 208
IL AM ARLISL STAG ++ SSTSTTPKLYTSL SVS *HWWY+GST PGVPCG
Sbjct: 192 ILWMAMPARLISLRSRVTSTAGFDEMSSTSTTPKLYTSLLSVSW*HWWYSGSTYPGVPCG 13
Query: 207 TVDT 196
V+T
Sbjct: 12 AVET 1
Score = 97.7 bits (207), Expect(2) = 3e-022
Identities = 45/90 (50%), Positives = 53/90 (58%)
Frame = -2 / -3
Query: 556 DTVQGLHHXXHRRP*IPF*LQAPERQLSDEIYGFLRLTVSLVPELRVDQLAHLVVLDSVE 377
D +G+ H RRP + LQAPERQL D + R V VPE+ V QL L +LD V+
Sbjct: 361 DAPKGVEHLLDRRPHLAVLLQAPERQLGDHRHRLPRRLVGAVPEVEVHQLLQLALLDLVD 182
Query: 376 SHVGQVDLAVAPAHVDGWLRGHELDQHDAE 287
H GQVDLA HV G LR EL +HDAE
Sbjct: 181 GHAGQVDLAAVAGHVHGGLRRDELHEHDAE 92
Score = 38.6 bits (78), Expect(2) = 3e-027
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 546 RASTTXXIDGRESLSSCKHRNASSAT 469
RAS+T I GR S C+HRNASSAT
Sbjct: 351 RASSTSLIGGRISPFCCRHRNASSAT 274
Score = 28.6 bits (56), Expect(2) = 3e-022
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 251 TGGTPGRRSPACPVGR 204
TGGT R+P CP GR
Sbjct: 56 TGGTLDPRTPGCPAGR 9
>gb|CW076696.1|CW076696 104_373_10889416_116_31777_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889416, DNA
sequence
Length = 738
Score = 96.4 bits (204), Expect(3) = 2e-045
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPG 226
++HRDVKT+NILLD +FHVKVADFGLSRL+P +VTHVST PQGTPG
Sbjct: 401 VVHRDVKTSNILLDANFHVKVADFGLSRLFPLDVTHVSTAPQGTPG 538
Score = 85.4 bits (180), Expect(2) = 4e-030
Identities = 37/59 (62%), Positives = 41/59 (69%)
Frame = -3 / -1
Query: 225 PGVPCGTVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRCMISTAWRYASASAVS 49
PGVPCG V+T VTS G RRDSPKSAT TWKL S MLLV TSRC + + ASA +
Sbjct: 537 PGVPCGAVETCVTSSGKRRDSPKSATLTWKLASRRMLLVLTSRCTTGGSTAWR*ASAAA 361
Score = 76.7 bits (161), Expect(3) = 2e-045
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / +1
Query: 227 YVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPA 328
YVDP YHQCY+LT++SDVYSFGVVLVEL+SSKPA
Sbjct: 637 YVDPEYHQCYQLTDRSDVYSFGVVLVELISSKPA 738
Score = 67.0 bits (140), Expect(2) = 4e-030
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3 / -2
Query: 327 AGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST 229
AG ++ SSTSTTPKLYTSL SVS *HWWY+GST
Sbjct: 737 AGFDEMSSTSTTPKLYTSLLSVSW*HWWYSGST 639
Score = 51.0 bits (105), Expect(3) = 2e-045
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / +2
Query: 5 SERGLTWPRRMSIAIETAEALAYLHAVE 88
+ER LTWP R+ +A+E A ALAYLHAVE
Sbjct: 311 AERALTWPLRLGVAVEAAAALAYLHAVE 394
>gb|CW107325.1|CW107325 104_477_11096522_148_34473_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096522, DNA
sequence
Length = 669
Score = 99.1 bits (210), Expect(3) = 4e-044
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYV 232
++HRDVKT NILLD +HVKVADFGLSRL+P +VTHVST PQGTPGYV
Sbjct: 337 VVHRDVKTTNILLDADYHVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 480
Score = 73.9 bits (155), Expect(2) = 8e-024
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = -3 / -2
Query: 240 TGST*PGVPCGTVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRCMISTAWRYASA 61
T T PGVP G V+TWVTS G RR+ PKSAT TW S ML+V TSRC +
Sbjct: 488 TTMTYPGVPWGAVETWVTSRGKRRERPKSATLTW*SASRRMLVVLTSRCTTGGSMACR*V 309
Query: 60 SAVSMAMLILR 28
SA + + +LR
Sbjct: 308 SAAADSTAMLR 276
Score = 71.2 bits (149), Expect(3) = 4e-044
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 215 GTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSS 319
G YVDP YHQCY+LT+KSDVYSFGVVLVEL+SS
Sbjct: 564 GLRRYVDPEYHQCYQLTDKSDVYSFGVVLVELISS 668
Score = 57.4 bits (119), Expect(2) = 8e-024
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -3 / -3
Query: 318 EDTSSTSTTPKLYTSLFSVSL*HWWYTGST 229
++ SSTSTTPKL TSL SVS *HWWY+GST
Sbjct: 667 DEMSSTSTTPKL*TSLLSVSW*HWWYSGST 578
Score = 49.2 bits (101), Expect(3) = 4e-044
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / +1
Query: 8 ERGLTWPRRMSIAIETAEALAYLHAVE 88
ER L+WP R+SIA+E+A AL YLHA+E
Sbjct: 250 ERALSWPLRLSIAVESAAALTYLHAIE 330
>gb|CW217295.1|CW217295 104_650_11195581_116_37129_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195581, DNA
sequence
Length = 596
Score = 104 bits (221), Expect(2) = 7e-044
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = +2 / -2
Query: 209 PQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRS 346
PQGTPGY+DP+YHQCY+LT+KSDVYSFGVVLVEL+SSKPAVDM R+
Sbjct: 592 PQGTPGYLDPMYHQCYQLTDKSDVYSFGVVLVELISSKPAVDMSRA 455
Score = 95.9 bits (203), Expect(2) = 7e-044
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +2 / -2
Query: 353 EINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXX 532
++NLA MA++ IQ +E+ +LVDP +GY TDG TK+++DLVAE+AFRCLQ E+D RP +
Sbjct: 445 DVNLATMAVHMIQCYEIDRLVDPRIGYRTDGGTKRAVDLVAEMAFRCLQPEQDVRPPISE 266
Query: 533 VVEAL 547
V++AL
Sbjct: 265 VLDAL 251
Score = 89.0 bits (188), Expect(2) = 7e-032
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -3 / +3
Query: 336 MSTAGLEDTSSTSTTPKLYTSLFSVSL*HWWYTGST*PGVPCG 208
MSTAGLE+ SSTSTTPKLYTSL SVS *HWWY GS PGVPCG
Sbjct: 465 MSTAGLEEMSSTSTTPKLYTSLLSVSW*HWWYMGSRYPGVPCG 593
Score = 69.3 bits (145), Expect(2) = 7e-032
Identities = 34/70 (48%), Positives = 41/70 (58%)
Frame = -2 / +2
Query: 547 QGLHHXXHRRP*IPF*LQAPERQLSDEIYGFLRLTVSLVPELRVDQLAHLVVLDSVESHV 368
Q + H RP + LQAPER LSDE++G L V VP+ RV + LV LD V H
Sbjct: 251 QRVQHLADGRPDVLLRLQAPERHLSDEVHGALGPAVRPVPDPRVHEAVDLVALDHVHGHG 430
Query: 367 GQVDLAVAPA 338
GQVD+A A A
Sbjct: 431 GQVDVAAAGA 460
>gb|CW309446.1|CW309446 104_798_11469200_116_35734_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469200, DNA
sequence
Length = 710
Score = 142 bits (304), Expect(3) = 3e-040
Identities = 60/113 (53%), Positives = 81/113 (71%)
Frame = +2 / -2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRD+K++NILLD+ KV+DFGLSRL P ++HVST QGT GY+DP Y++ Y+LT+
Sbjct: 529 IYHRDIKSSNILLDDRLDGKVSDFGLSRLAEPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 350
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
KSDVYSFGVVL+EL++SK A+D GR ++NLA + +VDP +
Sbjct: 349 KSDVYSFGVVLLELLTSKRAIDFGRGADDVNLAVHVQRVADEERLMDVVDPAI 191
Score = 33.6 bits (67), Expect(3) = 3e-040
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W +R++IA +TAE +AYLH
Sbjct: 610 LRWHQRLAIARQTAEGIAYLH 548
Score = 30.4 bits (60), Expect(3) = 3e-040
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2 / -2
Query: 479 LAFRCLQLERDSRPSMXXVVEALNRIXN 562
LA CL+ R +RPSM V E + I N
Sbjct: 139 LALGCLEERRQNRPSMKEVAEEIEYIIN 56
>gb|CW089349.1|CW089349 104_434_10948660_114_32602_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948660, DNA
sequence
Length = 613
Score = 97.3 bits (206), Expect(3) = 8e-040
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2 / -2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYV 232
++HRDVKT NI LD +HVKVADFGLSRL+P +VTHVST PQGTPGYV
Sbjct: 312 VVHRDVKTTNIFLDADYHVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 169
Score = 74.4 bits (156), Expect(2) = 3e-021
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = -3 / +2
Query: 240 TGST*PGVPCGTVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRCMISTAWRYASA 61
T T PGVP G V+TWVTS G RR+ PKSAT TW S ML+V TSRC +
Sbjct: 161 TTMTYPGVPWGAVETWVTSRGKRRERPKSATLTW*SASRKMLVVLTSRCTTGGSMACR*V 340
Query: 60 SAVSMAMLILR 28
SA + + +LR
Sbjct: 341 SAAADSTAMLR 373
Score = 58.3 bits (121), Expect(3) = 8e-040
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2 / -1
Query: 215 GTPGYVDPVYHQCYKLTEKSDVYSFGVV 298
G YVDP YHQCY+LT+KSDVYSFGVV
Sbjct: 85 GLRRYVDPEYHQCYQLTDKSDVYSFGVV 2
Score = 49.2 bits (101), Expect(3) = 8e-040
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / -2
Query: 8 ERGLTWPRRMSIAIETAEALAYLHAVE 88
ER L+WP R+SIA+E+A AL YLHA+E
Sbjct: 399 ERALSWPLRLSIAVESAAALTYLHAIE 319
Score = 48.3 bits (99), Expect(2) = 3e-021
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / +3
Query: 297 TTPKLYTSLFSVSL*HWWYTGST 229
TTPKL TSL SVS *HWWY+GST
Sbjct: 3 TTPKL*TSLLSVSW*HWWYSGST 71
>gb|CW262007.1|CW262007 104_729_11229818_148_35206_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229818, DNA
sequence
Length = 702
Score = 120 bits (256), Expect(3) = 2e-039
Identities = 50/91 (54%), Positives = 66/91 (72%)
Frame = +2 / -2
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
+H+ST PQGTPGYVDP YHQ + L+++SDVYSFGVVLVE++++ AVD R+ SE+NLA
Sbjct: 281 SHISTAPQGTPGYVDPQYHQNFHLSDRSDVYSFGVVLVEIITAMKAVDFARAPSEVNLAQ 102
Query: 371 MALNRIQNHEVGQLVDPELGYETDGETKKSI 463
+A++RI V +VDP L D T SI
Sbjct: 101 LAVDRIGRGCVDDIVDPYLDPHRDAWTLSSI 9
Score = 50.1 bits (103), Expect(3) = 2e-039
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2 / -2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRL 175
I HRDVK++NILLD ++ KVADFGLSR+
Sbjct: 392 IYHRDVKSSNILLDYEYNSKVADFGLSRM 306
Score = 33.1 bits (66), Expect(3) = 2e-039
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 17 LTWPRRMSIAIETAEALAYLHA 82
+ W R+ IA ETA+A+AYLH+
Sbjct: 473 MPWTVRLRIAAETAKAIAYLHS 408
>gb|CW107324.1|CW107324 104_477_11096522_116_34477_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096522, DNA
sequence
Length = 620
Score = 164 bits (353), Expect = 2e-039
Identities = 70/114 (61%), Positives = 87/114 (76%)
Frame = +2 / -3
Query: 215 GTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQN 394
G YVDP YHQCY+LT+KSDVYSFGVVLVEL+SSKPAVD+ R +EINLA MA+++IQ
Sbjct: 591 GLRRYVDPEYHQCYQLTDKSDVYSFGVVLVELISSKPAVDITRHRNEINLAGMAISKIQK 412
Query: 395 HEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
++ +LVD LGY+TD TKK + +VAELAFRCLQ + RP + V+E L I
Sbjct: 411 SQLEELVDLGLGYDTDPATKKMMTMVAELAFRCLQQNGEMRPPIKEVLEVLRSI 250
>gb|CW324355.1|CW324355 104_818_11477117_148_35908_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477117, DNA
sequence
Length = 665
Score = 128 bits (275), Expect(2) = 2e-035
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +2 / +2
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRDVKTNNILLD +FHVKVADFGLSRL+P THVST PQGTPGY+DP+YHQCY+LT
Sbjct: 485 QVVHRDVKTNNILLDAAFHVKVADFGLSRLFPAHATHVSTAPQGTPGYLDPMYHQCYQLT 664
Score = 96.8 bits (205), Expect(2) = 5e-023
Identities = 39/57 (68%), Positives = 40/57 (70%)
Frame = -3 / -3
Query: 264 VSL*HWWYTGST*PGVPCGTVDTWVTSGGYRRDSPKSATFTWKLLSSSMLLVFTSRC 94
VS *HWWY GS PGVPCG VDT V G R+ PKSATFTW S MLLVFTSRC
Sbjct: 663 VSW*HWWYMGSRYPGVPCGAVDTCVACAGNSRERPKSATFTWNAASRRMLLVFTSRC 493
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLHAVE 88
L+WP R+ IA+ETA AL YLH VE
Sbjct: 407 LSWPVRLGIAVETASALEYLHGVE 478
Score = 31.8 bits (63), Expect(2) = 5e-023
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 87 STAWRYASASAVSMAMLILRGH 22
ST WRY+SA AVS AM GH
Sbjct: 477 STPWRYSSALAVSTAMPRRTGH 412
>gb|CL168136.1|CL168136 104_365_10810586_114_31804_266 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810586, DNA
sequence
Length = 778
Score = 144 bits (310), Expect = 2e-033
Identities = 62/102 (60%), Positives = 79/102 (77%)
Frame = +2 / +3
Query: 251 CYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELG 430
CY+LT+KSDVYSFGVVLVEL+SSKPAVD+ R +EINLA MA+++IQ ++ +LVD LG
Sbjct: 3 CYQLTDKSDVYSFGVVLVELISSKPAVDITRHRNEINLAGMAISKIQKSQLEELVDLGLG 182
Query: 431 YETDGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
Y+TD TKK + +VAELAFRCLQ + RP + V+E L I
Sbjct: 183 YDTDPATKKMMTMVAELAFRCLQQNGEMRPPIKEVLEVLRSI 308
>gb|CN135637.1|CN135637 OX1_38_C08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_C08_A002 3', mRNA sequence
Length = 805
Score = 117 bits (251), Expect(3) = 5e-033
Identities = 46/114 (40%), Positives = 75/114 (65%)
Frame = +2 / +1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRD+K++NIL+D+ F+ K++DFGL+++ +H++T GT GYV P Y L
Sbjct: 184 KVVHRDIKSSNILIDDEFNAKISDFGLAKMLGAGKSHIATRVMGTFGYVAPEYANSGLLN 363
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
EKSDVYSFGVVL++ ++ + +D R +E+NL + + N ++VDP L
Sbjct: 364 EKSDVYSFGVVLLKAITGRDPIDYDRPTNEVNLVDWLKMMVANRRSEEVVDPNL 525
Score = 35.0 bits (70), Expect(3) = 5e-033
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM I + TA+ALAYLH
Sbjct: 106 LTWLARMKILLGTAKALAYLH 168
Score = 28.6 bits (56), Expect(3) = 5e-033
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 482 AFRCLQLERDSRPSMXXVVEALN 550
A RC+ L + RPSM VV L+
Sbjct: 571 ALRCIDLNAEKRPSMDQVVRMLD 639
>gb|CW168734.1|CW168734 104_578_11154305_148_36600_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154305, DNA
sequence
Length = 705
Score = 113 bits (241), Expect(3) = 3e-032
Identities = 50/118 (42%), Positives = 78/118 (66%)
Frame = +2 / -1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+H DVK++NILLD ++ KV+DFG S L P + + T+ QGT GY+DP Y Q +LT+
Sbjct: 483 ILHGDVKSSNILLDENYAAKVSDFGASILAPTDKSQFMTLVQGTCGYLDPEYMQTCQLTD 304
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETD 442
KSDVYSFGVVL+EL++ K A ++ +E +L+ L+ ++ + ++D + + D
Sbjct: 303 KSDVYSFGVVLLELLTGKMAFNLEGPENERSLSLHFLSAMKEDRLIDIIDDHIKSDND 130
Score = 37.3 bits (75), Expect(3) = 3e-032
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 461 IDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
++ VAELA CL++ D RP+M V E L+R+
Sbjct: 120 LEEVAELAQECLEMSGDRRPAMRDVAEKLDRL 25
Score = 28.1 bits (55), Expect(3) = 3e-032
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2 / -1
Query: 32 RMSIAIETAEALAYLHA 82
R+ IA+E+A ALAYLH+
Sbjct: 549 RLCIALESALALAYLHS 499
>gb|CW784741.1|CW784741 SP__Ba0002M01.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0002M01 5', DNA sequence
Length = 929
Score = 92.3 bits (195), Expect(3) = 2e-031
Identities = 41/110 (37%), Positives = 66/110 (60%)
Frame = +2 / +1
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL E++ ++PA++ ++NL
Sbjct: 307 EQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPAINPALPRDQVNL 486
Query: 365 ANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDS 514
A AL + E+ +++DP + + ++ + AE ++R S
Sbjct: 487 AEWALTWYRKGELSKIIDPHIAGQIRPDSLEMFAEAAEKCLADYGVDRPS 636
Score = 55.1 bits (114), Expect(3) = 2e-031
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F KVADFGLS+ P
Sbjct: 208 IIHRDVKTTNILLDENFVAKVADFGLSKAAP 300
Score = 28.6 bits (56), Expect(3) = 2e-031
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I+I A+ L YLH
Sbjct: 127 LSWKQRLEISIGAAKGLHYLH 189
>gb|CW385505.1|CW385505 fsbb001f069a06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f069a06, DNA
sequence
Length = 694
Score = 92.3 bits (195), Expect(3) = 2e-031
Identities = 41/110 (37%), Positives = 66/110 (60%)
Frame = +2 / +1
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL E++ ++PA++ ++NL
Sbjct: 337 EQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPAINPALPRDQVNL 516
Query: 365 ANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDS 514
A AL + E+ +++DP + + ++ + AE ++R S
Sbjct: 517 AEWALTWYRKGELSKIIDPHIAGQIRPDSLEMFAEAAEKCLADYGVDRPS 666
Score = 55.1 bits (114), Expect(3) = 2e-031
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F KVADFGLS+ P
Sbjct: 238 IIHRDVKTTNILLDENFVAKVADFGLSKAAP 330
Score = 28.6 bits (56), Expect(3) = 2e-031
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I+I A+ L YLH
Sbjct: 157 LSWKQRLEISIGAAKGLHYLH 219
>gb|CW167484.1|CW167484 104_576_11153628_148_36679_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153628, DNA
sequence
Length = 689
Score = 92.3 bits (195), Expect(3) = 2e-031
Identities = 41/110 (37%), Positives = 66/110 (60%)
Frame = +2 / +3
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL E++ ++PA++ ++NL
Sbjct: 207 EQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPAINPALPRDQVNL 386
Query: 365 ANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDS 514
A AL + E+ +++DP + + ++ + AE ++R S
Sbjct: 387 AEWALTWYRKGELSKIIDPHIAGQIRPDSLEMFAEAAEKCLADYGVDRPS 536
Score = 55.1 bits (114), Expect(3) = 2e-031
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F KVADFGLS+ P
Sbjct: 108 IIHRDVKTTNILLDENFVAKVADFGLSKAAP 200
Score = 28.6 bits (56), Expect(3) = 2e-031
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I+I A+ L YLH
Sbjct: 27 LSWKQRLEISIGAAKGLHYLH 89
>gb|CW281298.1|CW281298 104_756_11408099_148_35455_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408099, DNA
sequence
Length = 653
Score = 92.3 bits (195), Expect(3) = 2e-031
Identities = 41/110 (37%), Positives = 66/110 (60%)
Frame = +2 / +3
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL E++ ++PA++ ++NL
Sbjct: 183 EQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPAINPALPRDQVNL 362
Query: 365 ANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDS 514
A AL + E+ +++DP + + ++ + AE ++R S
Sbjct: 363 AEWALTWYRKGELSKIIDPHIAGQIRPDSLEMFAEAAEKCLADYGVDRPS 512
Score = 55.1 bits (114), Expect(3) = 2e-031
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F KVADFGLS+ P
Sbjct: 84 IIHRDVKTTNILLDENFVAKVADFGLSKAAP 176
Score = 28.6 bits (56), Expect(3) = 2e-031
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I+I A+ L YLH
Sbjct: 3 LSWKQRLEISIGAAKGLHYLH 65
>gb|CX612716.1|CX612716 GABR1_4_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_C04_A002 3', mRNA sequence
Length = 762
Score = 126 bits (269), Expect(2) = 2e-031
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +2 / +1
Query: 83 VEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKL 262
V IIHRD+K +NILLD +F K+ADFG SR P + TH++T+ QGT GY+DP Y Q +L
Sbjct: 1 VPIIHRDIKPSNILLDENFVAKIADFGASRSVPFDQTHITTLIQGTIGYLDPEYFQSSQL 180
Query: 263 TEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
TEKSDVYSFGVVL EL++ + + R NLA + + Q ++P +
Sbjct: 181 TEKSDVYSFGVVLAELLTRQKPISAARPEESCNLAMHLVVLFNEGRLLQEIEPHI 345
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 470 VAELAFRCLQLERDSRPSMXXVVEALNRIXNGDSLE 577
VAEL+ RCL ++ + RP+M V L+ + +++
Sbjct: 379 VAELSVRCLNVKGEERPTMVVVASVLHGLIRSFTID 486
>gb|BZ691140.1|BZ691140 SP__Ba0002M01.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0002M01 5', DNA sequence
Length = 798
Score = 92.3 bits (195), Expect(3) = 1e-030
Identities = 41/110 (37%), Positives = 66/110 (60%)
Frame = +2 / +3
Query: 185 EVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINL 364
E THVST +G+ GY+DP Y + +LTEKSDVYSFGVVL E++ ++PA++ ++NL
Sbjct: 357 EQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPAINPALPRDQVNL 536
Query: 365 ANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDS 514
A AL + E+ +++DP + + ++ + AE ++R S
Sbjct: 537 AEWALTWYRKGELSKIIDPHIAGQIRPDSLEMFAEAAEKCLADYGVDRPS 686
Score = 52.8 bits (109), Expect(3) = 1e-030
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
IIHRDVKT NILLD +F VADFGLS+ P
Sbjct: 258 IIHRDVKTTNILLDENFVANVADFGLSKAAP 350
Score = 28.6 bits (56), Expect(3) = 1e-030
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I+I A+ L YLH
Sbjct: 177 LSWKQRLEISIGAAKGLHYLH 239
>gb|CW421212.1|CW421212 fsbb001f128o20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f128o20, DNA
sequence
Length = 749
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 62/143 (43%), Positives = 89/143 (62%)
Frame = +2 / +3
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V I HRDVK++NILLD+++ KV+DFG SR P + THV T QGT GY+DP Y+ +
Sbjct: 282 SVSIFHRDVKSSNILLDSNYTAKVSDFGASRSVPIDQTHVVTNVQGTFGYLDPEYYHTGQ 461
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
L EKSDVYSFGVVLVEL+ + + + S+ NL+N L ++ + ++V ++ E
Sbjct: 462 LNEKSDVYSFGVVLVELLLRRQPILTSDTGSKQNLSNYFLWELKTRPIKEIVATQVWEEA 641
Query: 440 DGETKKSIDLVAELAFRCLQLER 508
E SI +A++ R ER
Sbjct: 642 TEEEINSIASLAKMCLRLNSGER 710
Score = 26.3 bits (51), Expect(2) = 1e-030
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLHA 82
L+W + IA E A AL YLH+
Sbjct: 210 LSWDDCLRIAAEAAGALYYLHS 275
>gb|BI074560.1|BI074560 IP1_13_A11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 484
Score = 123 bits (264), Expect(2) = 1e-030
Identities = 50/114 (43%), Positives = 75/114 (65%)
Frame = +2 / +1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRD+K++NIL+D+ F+ KV+DFGL++L + +H++T GT GYV P Y L
Sbjct: 121 KVVHRDIKSSNILIDDEFNGKVSDFGLAKLLGSDKSHITTRVMGTFGYVAPEYANTGMLN 300
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
EKSDVYSFGV+L+E V+ + VD RS +E+NL + N ++ DP L
Sbjct: 301 EKSDVYSFGVLLLETVTGRNPVDYSRSSNEVNLVEWLKTMVANRRAEEVADPSL 462
Score = 31.3 bits (62), Expect(2) = 1e-030
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 20 TWPRRMSIAIETAEALAYLH 79
+W RM + TA+ALAYLH
Sbjct: 46 SWENRMKVVTGTAKALAYLH 105
>gb|AW284352.2|AW284352 LG1_275_D12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 119 bits (255), Expect(2) = 4e-030
Identities = 49/114 (42%), Positives = 75/114 (65%)
Frame = +2 / +3
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRD+K++NIL+D+ F KV+DFGL++L +HV+T GT GYV P Y L
Sbjct: 102 KVVHRDIKSSNILIDDEFESKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLN 281
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
EKSD+YSFGVVL+E ++ + VD GR +E+NL + + + ++VDP +
Sbjct: 282 EKSDIYSFGVVLLEAITGRDPVDYGRPPNEVNLVDWLKMMVASRRSEEVVDPTI 443
Score = 34.1 bits (68), Expect(2) = 4e-030
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW R+ I + TA+ALAYLH
Sbjct: 24 LTWEARIKILLGTAKALAYLH 86
>gb|CW417882.1|CW417882 fsbb001f121b13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121b13, DNA
sequence
Length = 730
Score = 133 bits (285), Expect = 5e-030
Identities = 63/134 (47%), Positives = 84/134 (62%)
Frame = +2 / -2
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
++ I HRDVK++NILLD ++ KV+DFG SR P + THVST QGT GY+DP Y+Q K
Sbjct: 678 SISIFHRDVKSSNILLDGNYTAKVSDFGASRSAPIDQTHVSTNVQGTFGYLDPEYYQTGK 499
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
L EKSDVYSFGVVL+EL+ K V S + NL N L+ I+ V ++ E E
Sbjct: 498 LNEKSDVYSFGVVLLELLLRKQTVFTNESGMKHNLCNYFLSEIKTKSVTEITAAEFLEEA 319
Query: 440 DGETKKSIDLVAEL 481
E + + +AE+
Sbjct: 318 TVEQIEKVASLAEM 277
>gb|CW309447.1|CW309447 104_798_11469200_148_35742_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469200, DNA
sequence
Length = 642
Score = 119 bits (254), Expect(2) = 7e-030
Identities = 49/77 (63%), Positives = 64/77 (83%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I HRD+K++NILLD+ KV+DFGLSRL P ++HVST QGT GY+DP Y++ Y+LT+
Sbjct: 412 IYHRDIKSSNILLDDRLDGKVSDFGLSRLAEPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 591
Query: 269 KSDVYSFGVVLVELVSS 319
KSDVYSFGVVL+EL++S
Sbjct: 592 KSDVYSFGVVLLELLTS 642
Score = 33.6 bits (67), Expect(2) = 7e-030
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W +R++IA +TAE +AYLH
Sbjct: 331 LRWHQRLAIARQTAEGIAYLH 393
>gb|CW234831.1|CW234831 104_688_11214253_148_37386_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214253, DNA
sequence
Length = 657
Score = 113 bits (241), Expect(3) = 9e-030
Identities = 50/118 (42%), Positives = 78/118 (66%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+H DVK++NILLD ++ KV+DFG S L P + + T+ QGT GY+DP Y Q +LT+
Sbjct: 221 ILHGDVKSSNILLDENYAAKVSDFGASILAPTDKSQFMTLVQGTCGYLDPEYMQTCQLTD 400
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETD 442
KSDVYSFGVVL+EL++ K A ++ +E +L+ L+ ++ + ++D + + D
Sbjct: 401 KSDVYSFGVVLLELLTGKMAFNLEGPENERSLSLHFLSAMKEDRLIDIIDDHIKSDND 574
Score = 29.0 bits (57), Expect(3) = 9e-030
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +2
Query: 461 IDLVAELAFRCLQLERDSRPSM 526
++ VAELA CL++ D RP+M
Sbjct: 584 LEEVAELAQECLEMSGDRRPAM 649
Score = 28.1 bits (55), Expect(3) = 9e-030
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 32 RMSIAIETAEALAYLHA 82
R+ IA+E+A ALAYLH+
Sbjct: 155 RLCIALESALALAYLHS 205
>gb|CW326585.1|CW326585 104_822_11478294_148_35969_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478294, DNA
sequence
Length = 692
Score = 132 bits (282), Expect = 1e-029
Identities = 63/156 (40%), Positives = 95/156 (60%)
Frame = +2 / -2
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V + HRDVK++NILLD S+ KV+DFG SRL P + THV T QGT GY+DP Y+ +
Sbjct: 691 SVSVFHRDVKSSNILLDGSYTAKVSDFGASRLIPIDQTHVVTNVQGTFGYLDPEYYHTGQ 512
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
L EKSDVYSFGVVL+EL+ K + S S+ NL+N L +++ + ++V PE+ +
Sbjct: 511 LNEKSDVYSFGVVLLELLLRKEPIFTSASGSKQNLSNHFLWEMRSRPITEIVAPEVLDQA 332
Query: 440 DGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
+ ++ +A+ R ER + + ++ L
Sbjct: 331 SQDEISTVASLAQECLRLQGEERPTMKQVEMKLQLL 224
>gb|CW212186.1|CW212186 104_643_11190891_116_37022_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11190891, DNA
sequence
Length = 651
Score = 121 bits (258), Expect(2) = 2e-029
Identities = 58/156 (37%), Positives = 92/156 (58%)
Frame = +2 / -3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+H DVK+ NILLD + KV+DFG S L P + + TV QGT GY+DP Y Q Y+LT+
Sbjct: 505 ILHGDVKSTNILLDGDYTAKVSDFGASILAPNDKSQFVTVVQGTCGYLDPEYMQTYELTD 326
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVL+EL++ K A ++ ++ +L+ L ++ +++ +VD ++ + E
Sbjct: 325 KSDVYSFGVVLLELLTGKKAFNLEGPENDRSLSMRFLYAMKENKLEDIVDDQIKNSENLE 146
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
+ I +A + R S + ++ L +I
Sbjct: 145 YLEEIAELARQCLEMSGVNRPSMKEVADKLDRLRKI 38
Score = 30.4 bits (60), Expect(2) = 2e-029
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2 / -3
Query: 32 RMSIAIETAEALAYLHA 82
R+ IA E+AEALAYLH+
Sbjct: 571 RLRIAYESAEALAYLHS 521
>gb|BE367090.1|BE367090 PI1_42_C12.g2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 480
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +2 / +2
Query: 353 EINLANMALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDSRPSMXX 532
++NLA MA++ IQ +E+ +LVDP +GY TDG TK+++DLVAE+AFRCLQ E+D RP +
Sbjct: 92 DVNLATMAVHMIQCYEIDRLVDPRIGYRTDGGTKRAVDLVAEMAFRCLQPEQDVRPPISE 271
Query: 533 VVEAL 547
V++AL
Sbjct: 272 VLDAL 286
Score = 55.6 bits (115), Expect(2) = 2e-029
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2 / +2
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRS 346
KSDVYSFGVVLVEL+SSKPAVDM R+
Sbjct: 5 KSDVYSFGVVLVELISSKPAVDMSRA 82
>gb|CW377275.1|CW377275 fsbb001f055i11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055i11, DNA
sequence
Length = 812
Score = 116 bits (247), Expect(2) = 2e-029
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = +2 / +2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+HRD+K++NILLD S V+DFG SR PP+ T ++T QGT GY+DP+Y+ +LTE
Sbjct: 155 IVHRDIKSHNILLDGSLTANVSDFGASRCIPPDETGIATAIQGTLGYLDPMYYYTGRLTE 334
Query: 269 KSDVYSFGVVLVELVSSK 322
KSDVYSFGVVL+EL++ K
Sbjct: 335 KSDVYSFGVVLIELLTRK 388
Score = 35.0 bits (70), Expect(2) = 2e-029
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W R+ IA ETA ALAYLH
Sbjct: 74 LGWDHRLRIATETARALAYLH 136
>gb|CW326584.1|CW326584 104_822_11478294_116_35968_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478294, DNA
sequence
Length = 541
Score = 122 bits (261), Expect(2) = 3e-029
Identities = 54/97 (55%), Positives = 69/97 (71%)
Frame = +2 / +3
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V + HRDVK++NILLD S+ KV+DFG SRL P + THV T QGT GY+DP Y+ +
Sbjct: 240 SVSVFHRDVKSSNILLDGSYTAKVSDFGASRLIPIDQTHVVTNVQGTFGYLDPEYYHTGQ 419
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
L EKSDVYSFGVVL+EL+ K + S S+ NL+N
Sbjct: 420 LNEKSDVYSFGVVLLELLLRKEPIFTSASGSKQNLSN 530
Score = 28.1 bits (55), Expect(2) = 3e-029
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLHA 82
L+W + IA E A AL YLH+
Sbjct: 168 LSWDDSLRIATEAAGALCYLHS 233
>gb|CW383753.1|CW383753 fsbb001f066h01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f066h01, DNA
sequence
Length = 734
Score = 119 bits (255), Expect(2) = 4e-029
Identities = 57/156 (36%), Positives = 92/156 (58%)
Frame = +2 / -3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+H DVK+ NILLD + KV+DFG S L P + + TV QGT GY+DP Y Q Y+LT+
Sbjct: 570 ILHGDVKSTNILLDGDYTAKVSDFGASILAPNDKSQFVTVVQGTCGYLDPEYMQTYELTD 391
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVL+EL++ K A ++ ++ +L+ L ++ +++ +VD ++ + E
Sbjct: 390 KSDVYSFGVVLLELLTGKKAFNLEGPENDRSLSMRFLYAMKENKLEDIVDDQIKNSENLE 211
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
+ I +A + R + + ++ L +I
Sbjct: 210 YLEEIAELARQCLEMSGVNRPTMKEVADKLDRLRKI 103
Score = 30.4 bits (60), Expect(2) = 4e-029
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2 / -3
Query: 32 RMSIAIETAEALAYLHA 82
R+ IA E+AEALAYLH+
Sbjct: 636 RLRIAYESAEALAYLHS 586
>gb|CW326662.1|CW326662 104_822_11478336_148_35965_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478336, DNA
sequence
Length = 618
Score = 130 bits (278), Expect = 5e-029
Identities = 59/156 (37%), Positives = 92/156 (58%)
Frame = +2 / -1
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V + HRDVK++NILLD ++ KV+DFG SRL P + THV T+ QGT GY+DP Y+ +
Sbjct: 558 SVSVFHRDVKSSNILLDANYTAKVSDFGASRLVPIDETHVDTLVQGTFGYLDPEYYHTGQ 379
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
L EKSDVYSFGVVLVEL+ + + + S NL++ L+ + + +++ E+ E
Sbjct: 378 LNEKSDVYSFGVVLVELLIRRKPIFTNETGSTQNLSSYFLSEFNSRPIEEIIAAEIREEA 199
Query: 440 DGETKKSIDLVAELAFRCLQLERDSRPSMXXVVEAL 547
E S+ +A++ +R + + + L
Sbjct: 198 TKEEISSVASLAKMCLMLRGQDRPTMKQVEMALHTL 91
>gb|CW074398.1|CW074398 104_347_10803474_114_31377_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803474, DNA
sequence
Length = 753
Score = 110 bits (234), Expect(2) = 8e-029
Identities = 54/154 (35%), Positives = 85/154 (55%)
Frame = +2 / +3
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
+V + HRD+K+ NILL + K++DFG SR + T V T QGT GY+DP Y+ +
Sbjct: 210 SVSVFHRDIKSANILLTDILTAKLSDFGASRSISIDETGVLTAIQGTHGYLDPEYYYTSR 389
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
LTEKSDVYSFGV+L EL++ V S +LA+ ++ I+++ + ++D ++ E
Sbjct: 390 LTEKSDVYSFGVILAELLTRVKPVFSSHSSEGASLASHFVSLIRDNRLSDILDSQIVEEG 569
Query: 440 DGETKKSIDLVAELAFRCLQLERDSRPSMXXVVE 541
E K + +A ER + + +E
Sbjct: 570 GTEDAKEVARLAMACLSLKGEERPTMRQVETTLE 671
Score = 39.1 bits (79), Expect(2) = 8e-029
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2 / +3
Query: 5 SERGLTWPRRMSIAIETAEALAYLHA 82
SE L+W R+ IA+ETA A+AYLH+
Sbjct: 126 SESPLSWKDRLRIALETARAIAYLHS 203
>gb|CW269736.1|CW269736 104_740_11401968_148_35317_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401968, DNA
sequence
Length = 662
Score = 118 bits (252), Expect(2) = 1e-028
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 146 KVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKP 325
KV+DFGLSRL P ++HVST QGT GY+DP Y++ Y+LT+KSDVYSFGVVL+EL++SK
Sbjct: 657 KVSDFGLSRLAEPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSKR 478
Query: 326 AVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
A+D GR ++NLA + +VDP +
Sbjct: 477 AIDFGRGADDVNLAVHVQRVADEERLMDVVDPAI 376
Score = 30.4 bits (60), Expect(2) = 1e-028
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2 / -3
Query: 479 LAFRCLQLERDSRPSMXXVVEALNRIXN 562
LA CL+ R +RPSM V E + I N
Sbjct: 324 LALGCLEERRQNRPSMKEVAEEIEYIIN 241
>gb|CW269737.1|CW269737 104_740_11401968_148_36232_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401968, DNA
sequence
Length = 662
Score = 118 bits (252), Expect(2) = 1e-028
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 146 KVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKP 325
KV+DFGLSRL P ++HVST QGT GY+DP Y++ Y+LT+KSDVYSFGVVL+EL++SK
Sbjct: 657 KVSDFGLSRLAEPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSKR 478
Query: 326 AVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
A+D GR ++NLA + +VDP +
Sbjct: 477 AIDFGRGADDVNLAVHVQRVADEERLMDVVDPAI 376
Score = 30.4 bits (60), Expect(2) = 1e-028
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2 / -3
Query: 479 LAFRCLQLERDSRPSMXXVVEALNRIXN 562
LA CL+ R +RPSM V E + I N
Sbjct: 324 LALGCLEERRQNRPSMKEVAEEIEYIIN 241
>gb|CW407446.1|CW407446 fsbb001f100o22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100o22, DNA
sequence
Length = 751
Score = 110 bits (234), Expect(2) = 2e-028
Identities = 52/137 (37%), Positives = 82/137 (59%)
Frame = +2 / +3
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYK 259
++ + HRD+K+ NILL ++ KV+DFG SR + T + T QGT GY+DP Y+ +
Sbjct: 231 SILVFHRDIKSANILLTDALTAKVSDFGASRSISIDDTGILTAIQGTHGYLDPEYYYTSR 410
Query: 260 LTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYET 439
LTEKSDVYSFGV+L EL++ V S +LA+ ++ ++++ + ++DP + E
Sbjct: 411 LTEKSDVYSFGVILAELLTRVKPVFSTPSSEVTSLASHFVSMMRDNRLCDILDPRIVEEG 590
Query: 440 DGETKKSIDLVAELAFR 490
E K + +AE R
Sbjct: 591 STEDIKVVAGLAEACLR 641
Score = 38.2 bits (77), Expect(2) = 2e-028
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +3
Query: 5 SERGLTWPRRMSIAIETAEALAYLHAVEII 94
SE L+W R+ IA+ET+ A+AYLH+ I
Sbjct: 147 SENILSWKDRLRIAVETSRAIAYLHSAASI 236
>gb|CW203559.1|CW203559 104_631_11186083_116_37092_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186083, DNA
sequence
Length = 690
Score = 99.1 bits (210), Expect(2) = 2e-028
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2 / -2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYV 232
++HRDVKT NILLD +HVKVADFGLSRL+P +VTHVST PQGTPGYV
Sbjct: 227 VVHRDVKTTNILLDADYHVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 84
Score = 49.2 bits (101), Expect(2) = 2e-028
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / -2
Query: 8 ERGLTWPRRMSIAIETAEALAYLHAVE 88
ER L+WP R+SIA+E+A AL YLHA+E
Sbjct: 314 ERALSWPLRLSIAVESAAALTYLHAIE 234
>gb|CW149795.1|CW149795 104_549_11142687_148_36300_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142687, DNA
sequence
Length = 679
Score = 99.1 bits (210), Expect(2) = 2e-028
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2 / -3
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYV 232
++HRDVKT NILLD +HVKVADFGLSRL+P +VTHVST PQGTPGYV
Sbjct: 182 VVHRDVKTTNILLDADYHVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 39
Score = 49.2 bits (101), Expect(2) = 2e-028
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / -3
Query: 8 ERGLTWPRRMSIAIETAEALAYLHAVE 88
ER L+WP R+SIA+E+A AL YLHA+E
Sbjct: 269 ERALSWPLRLSIAVESAAALTYLHAIE 189
>gb|CX612968.1|CX612968 GABR1_5_B04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_5_B04_A002 5', mRNA sequence
Length = 623
Score = 115 bits (245), Expect(2) = 2e-028
Identities = 47/114 (41%), Positives = 74/114 (64%)
Frame = +2 / +1
Query: 86 EIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLT 265
+++HRD+K++NIL+D F+ K++DFGL++L +H++T GT GYV P Y L
Sbjct: 241 KVVHRDIKSSNILIDEEFNGKLSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANTGLLN 420
Query: 266 EKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPEL 427
EKSDVYSFGV+L+E V+ + VD GR +E++L + ++VDP++
Sbjct: 421 EKSDVYSFGVLLLEAVTGRDPVDYGRPANEVHLVEWLKMMVGTKRAEEVVDPDM 582
Score = 32.7 bits (65), Expect(2) = 2e-028
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
LTW RM + + A+ALAYLH
Sbjct: 163 LTWEARMKVILGIAKALAYLH 225
>gb|CL171430.1|CL171430 104_373_10889420_116_31777_092 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889420, DNA
sequence
Length = 727
Score = 119 bits (255), Expect(2) = 3e-028
Identities = 57/156 (36%), Positives = 92/156 (58%)
Frame = +2 / -2
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKLTE 268
I+H DVK+ NILLD + KV+DFG S L P + + TV QGT GY+DP Y Q Y+LT+
Sbjct: 666 ILHGDVKSTNILLDGDYTAKVSDFGASILAPNDKSQFVTVVQGTCGYLDPEYMQTYELTD 487
Query: 269 KSDVYSFGVVLVELVSSKPAVDMGRSHSEINLANMALNRIQNHEVGQLVDPELGYETDGE 448
KSDVYSFGVVL+EL++ K A ++ ++ +L+ L ++ +++ +VD ++ + E
Sbjct: 486 KSDVYSFGVVLLELLTGKKAFNLEGPENDRSLSMRFLYAMKENKLEDIVDDQIKNSENLE 307
Query: 449 TKKSIDLVAELAFRCLQLERDSRPSMXXVVEALNRI 556
+ I +A + R + + ++ L +I
Sbjct: 306 YLEEIAELARQCLEMSGVNRPTMKEVADKLDRLRKI 199
Score = 27.6 bits (54), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 41 IAIETAEALAYLHA 82
IA E+AEALAYLH+
Sbjct: 723 IAYESAEALAYLHS 682
>gb|CW071934.1|CW071934 104_324_10591951_116_30464 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591951, DNA
sequence
Length = 694
Score = 96.4 bits (204), Expect(2) = 3e-028
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +2 / +1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPG 226
++HRDVKT+NILLD +FHVKVADFGLSRL+P +VTHVST PQGTPG
Sbjct: 463 VVHRDVKTSNILLDANFHVKVADFGLSRLFPLDVTHVSTAPQGTPG 600
Score = 51.0 bits (105), Expect(2) = 3e-028
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 5 SERGLTWPRRMSIAIETAEALAYLHAVE 88
+ER LTWP R+ +A+E A ALAYLHAVE
Sbjct: 373 AERALTWPLRLGVAVEAAAALAYLHAVE 456
>gb|CW348198.1|CW348198 fsbb001f008h06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f008h06, DNA
sequence
Length = 556
Score = 96.4 bits (204), Expect(2) = 3e-028
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +2 / -1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPG 226
++HRDVKT+NILLD +FHVKVADFGLSRL+P +VTHVST PQGTPG
Sbjct: 232 VVHRDVKTSNILLDANFHVKVADFGLSRLFPLDVTHVSTAPQGTPG 95
Score = 51.0 bits (105), Expect(2) = 3e-028
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / -1
Query: 5 SERGLTWPRRMSIAIETAEALAYLHAVE 88
+ER LTWP R+ +A+E A ALAYLHAVE
Sbjct: 322 AERALTWPLRLGVAVEAAAALAYLHAVE 239
>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence
Length = 70712
Score = 87.2 bits (184), Expect(3) = 3e-028
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +2 / -1
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
THVST +G+ GY+DP Y + KLT+KSDVYSFGVVL+E++ ++P +D INLA
Sbjct: 44300 THVSTAVKGSFGYLDPEYFRRQKLTDKSDVYSFGVVLLEVICARPVIDPTLPRDMINLAE 44121
Query: 371 MALNRIQNHEVGQLVDPEL 427
A+ + E+ Q+VD +
Sbjct: 44120 WAIKWQKRGELDQIVDQRI 44064
Score = 49.6 bits (102), Expect(3) = 3e-028
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2 / -1
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
A IIHRDVK+ NILLD + KV+DFGLS++ P
Sbjct: 44414 AKSIIHRDVKSANILLDENLLAKVSDFGLSKVGP 44313
Score = 28.1 bits (55), Expect(3) = 3e-028
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2 / -1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I I A L YLH
Sbjct: 44486 LSWKKRLEICIGAARGLHYLH 44424
>gb|BI140868.1|BI140868 IP1_40_B03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 569
Score = 87.2 bits (184), Expect(3) = 3e-028
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +2 / +1
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
THVST +G+ GY+DP Y + KLT+KSDVYSFGVVL+E++ ++P +D INLA
Sbjct: 202 THVSTAVKGSFGYLDPEYFRRQKLTDKSDVYSFGVVLLEVICARPVIDPTLPRDMINLAE 381
Query: 371 MALNRIQNHEVGQLVDPEL 427
A+ + E+ Q+VD +
Sbjct: 382 WAIKWQKRGELDQIVDQRI 438
Score = 49.6 bits (102), Expect(3) = 3e-028
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2 / +1
Query: 80 AVEIIHRDVKTNNILLDNSFHVKVADFGLSRLYP 181
A IIHRDVK+ NILLD + KV+DFGLS++ P
Sbjct: 88 AKSIIHRDVKSANILLDENLLAKVSDFGLSKVGP 189
Score = 28.1 bits (55), Expect(3) = 3e-028
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L+W +R+ I I A L YLH
Sbjct: 16 LSWKKRLEICIGAARGLHYLH 78
>gb|CW276575.1|CW276575 104_750_11405564_116_35397_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405564, DNA
sequence
Length = 704
Score = 85.4 bits (180), Expect(3) = 5e-028
Identities = 38/108 (35%), Positives = 64/108 (59%)
Frame = +2 / -1
Query: 191 THVSTVPQGTPGYVDPVYHQCYKLTEKSDVYSFGVVLVELVSSKPAVDMGRSHSEINLAN 370
THVST +GT GY+DP Y + +LT KSDVY+FGVVL E++ ++P +++ +++L +
Sbjct: 341 THVSTAVKGTFGYLDPEYFRSKRLTRKSDVYAFGVVLFEVLCARPVINIQLPEEQVSLHD 162
Query: 371 MALNRIQNHEVGQLVDPELGYETDGETKKSIDLVAELAFRCLQLERDS 514
AL+ +N + +++DP L + E + AE ++R S
Sbjct: 161 WALSCQKNGMLSEIIDPHLQGKITPECFRKFTETAEQCVAHRSIDRPS 18
Score = 52.4 bits (108), Expect(3) = 5e-028
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2 / -1
Query: 89 IIHRDVKTNNILLDNSFHVKVADFGLSR 172
IIHRDVKT NILLD+ F KVADFGLS+
Sbjct: 446 IIHRDVKTANILLDDKFVAKVADFGLSK 363
Score = 26.7 bits (52), Expect(3) = 5e-028
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2 / -1
Query: 17 LTWPRRMSIAIETAEALAYLH 79
L W +R+ I I A L YLH
Sbjct: 527 LPWKQRLEICIGAARGLHYLH 465
>gb|CW112156.1|CW112156 104_485_11104730_116_34540_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104730, DNA
sequence
Length = 624
Score = 114 bits (243), Expect(2) = 5e-028
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 83 VEIIHRDVKTNNILLDNSFHVKVADFGLSRLYPPEVTHVSTVPQGTPGYVDPVYHQCYKL 262
+ I+HRD+K++NILLD KV+DFG SR P + T V+T QGT GY+DP Y+ ++L
Sbjct: 288 ISIVHRDIKSSNILLDERLIAKVSDFGASRDIPIDQTGVNTAVQGTFGYLDPEYYHTWRL 467
Query: 263 TEKSDVYSFGVVLVELVSSKPAVD 334
TEKSDVYSFGV+LVEL++ K D
Sbjct: 468 TEKSDVYSFGVILVELLTRKKPFD 539
Score = 32.2 bits (64), Expect(2) = 5e-028
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 17 LTWPRRMSIAIETAEALAYLHA 82
L W R+ +A+E A +LAYLH+
Sbjct: 213 LPWKERVRVALEIARSLAYLHS 278
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 695,790,314
Number of Sequences: 832831
Number of extensions: 10442239
Number of successful extensions: 162900
Number of sequences better than 1.0e-020: 189
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 19263088593
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)