TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL10h01.xg.2.1
(610 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 314 1e-085
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 314 1e-085
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 306 6e-083
gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1... 304 2e-082
gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorgh... 171 5e-081
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 171 3e-079
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 241 2e-074
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 241 2e-074
gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassino... 241 2e-074
gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1... 241 2e-074
gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed see... 241 2e-074
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 240 5e-074
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 239 6e-074
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 239 9e-074
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 239 9e-074
gb|BE359862.1|BE359862 DG1_58_G02.b2_A002 Dark Grown 1 (DG1... 228 8e-070
gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) So... 258 1e-068
gb|CN151800.1|CN151800 WOUND1_77_E10.g1_A002 Wounded leaves... 220 2e-067
gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2... 251 1e-066
gb|CW219580.1|CW219580 104_653_11196859_116_37141_068 Sorgh... 142 1e-065
gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sor... 210 1e-062
gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2... 232 9e-061
gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/c... 207 3e-060
gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1... 201 8e-060
gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Me... 201 2e-058
gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (L... 187 4e-058
gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation... 124 5e-057
gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1... 214 2e-055
gb|CD428137.1|CD428137 ETH1_32_H05.g1_A002 Ethylene-treated... 133 5e-055
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 211 6e-054
gb|CW292511.1|CW292511 104_772_11414127_148_35581_054 Sorgh... 151 2e-050
gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficien... 194 1e-049
gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (L... 166 3e-049
gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1... 153 4e-048
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 166 4e-043
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 171 1e-041
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 169 4e-041
gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2... 136 6e-040
gb|CW292510.1|CW292510 104_772_11414127_116_35577_054 Sorgh... 151 3e-039
gb|CW130175.1|CW130175 104_512_11114967_148_34774_056 Sorgh... 151 3e-039
gb|CW063399.1|CW063399 104_309_10521981_115_30140 Sorghum m... 151 3e-039
gb|CF427844.1|CF427844 PH1_11_F08.b1_A002 Phosphorous-defic... 160 1e-038
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 155 6e-037
gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves... 99 2e-033
gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seed... 99 2e-033
gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves... 99 2e-033
gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seed... 99 2e-033
gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassino... 99 2e-033
gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedl... 99 2e-033
gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorgh... 99 2e-033
gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassino... 99 2e-033
gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation... 99 2e-033
gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seed... 99 2e-033
gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2... 99 2e-033
gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (L... 99 2e-033
gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves... 99 2e-033
gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassino... 98 2e-033
gb|CW044997.1|CW044997 104_281_10509293_114_30236 Sorghum m... 105 9e-032
gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seed... 101 1e-031
gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorgh... 101 1e-031
gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation... 137 1e-031
gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves... 100 2e-031
gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorgh... 99 2e-031
gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/c... 99 2e-031
gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2... 99 2e-031
gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1... 99 2e-031
gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1... 99 2e-031
gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2... 99 2e-031
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 99 3e-031
gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seed... 99 8e-031
gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation... 101 1e-029
gb|BE593489.1|BE593489 WS1_98_E03.b1_A002 Water-stressed 1 ... 88 3e-028
gb|BE356459.1|BE356459 DG1_125_C07.b1_A002 Dark Grown 1 (DG... 88 3e-028
gb|CL154551.1|CL154551 104_339_10781491_116_31372_355 Sorgh... 99 4e-028
gb|CW171233.1|CW171233 104_581_11155631_116_36521_082 Sorgh... 99 4e-028
gb|CW032387.1|CW032387 104_261_10501349_114_30363 Sorghum m... 99 4e-028
gb|CN125727.1|CN125727 RHOH1_12_H07.g1_A002 Acid- and alkal... 99 8e-028
gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum m... 87 8e-028
gb|CX616548.1|CX616548 GABR1_28_C07.g1_A002 GA- or brassino... 88 8e-028
gb|CN136100.1|CN136100 OX1_40_F12.g1_A002 Oxidatively-stres... 92 2e-027
gb|CF433664.1|CF433664 NIT1_28_D06.g1_A002 Nitrogen-deficie... 92 2e-027
gb|CD225014.1|CD225014 CCC1_37_D01.g1_A007 Callus culture/c... 92 2e-027
gb|CW175933.1|CW175933 104_588_11158217_116_36578_069 Sorgh... 88 4e-027
gb|CD229214.1|CD229214 CCC1_13_B02.g1_A007 Callus culture/c... 91 4e-027
gb|CW253378.1|CW253378 104_717_11225053_116_35110_063 Sorgh... 95 9e-027
gb|CW053111.1|CW053111 104_293_10515781_114_30184 Sorghum m... 95 9e-027
gb|CD211845.1|CD211845 HS1_64_C08.g1_A012 Heat-shocked seed... 90 1e-026
gb|BI075202.1|BI075202 IP1_17_D05.b1_A002 Immature pannicle... 90 1e-026
gb|CF427438.1|CF427438 PH1_1_H06.g1_A002 Phosphorous-defici... 90 1e-026
gb|CF429532.1|CF429532 PH1_22_C12.g1_A002 Phosphorous-defic... 82 1e-026
gb|CW396733.1|CW396733 fsbb001f085f03f0 Sorghum methylation... 99 2e-026
gb|CW221899.1|CW221899 104_657_11202092_116_37451_078 Sorgh... 88 4e-026
gb|CW493542.1|CW493542 fsbb001f284f17k0 Sorghum methylation... 88 4e-026
gb|CN136666.1|CN136666 OX1_44_D01.g1_A002 Oxidatively-stres... 92 5e-026
gb|BE918783.1|BE918783 OV1_4_H11.b1_A002 Ovary 1 (OV1) Sorg... 88 7e-026
gb|CW201322.1|CW201322 104_627_11184511_148_37110_030 Sorgh... 79 9e-026
gb|CW201321.1|CW201321 104_627_11184511_116_37109_030 Sorgh... 79 9e-026
gb|CW289114.1|CW289114 104_767_11412305_116_35541_065 Sorgh... 79 9e-026
gb|CW325952.1|CW325952 104_821_11477963_116_36062_046 Sorgh... 79 9e-026
gb|CW166039.1|CW166039 104_574_11152832_116_36481_022 Sorgh... 79 9e-026
gb|CW360230.1|CW360230 fsbb001f028d16f0 Sorghum methylation... 99 2e-025
gb|CL165204.1|CL165204 104_360_10808428_116_31819_028 Sorgh... 90 6e-025
gb|CW105399.1|CW105399 104_474_11012877_116_34452_085 Sorgh... 90 6e-025
gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorgh... 79 8e-025
gb|CW439907.1|CW439907 fsbb001f158e17f0 Sorghum methylation... 88 1e-024
gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stres... 97 3e-024
gb|CW325953.1|CW325953 104_821_11477963_148_36063_046 Sorgh... 73 4e-024
gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seed... 76 5e-024
gb|CN131411.1|CN131411 RHOH1_47_H10.g1_A002 Acid- and alkal... 73 1e-023
gb|BE356437.1|BE356437 DG1_125_G03.b1_A002 Dark Grown 1 (DG... 73 1e-023
gb|CW465154.1|CW465154 fsbb001f215m11f0 Sorghum methylation... 99 2e-023
gb|CD213004.1|CD213004 HS1_17_C02.g1_A012 Heat-shocked seed... 77 9e-023
gb|CW045087.1|CW045087 104_281_10509350_114_30237 Sorghum m... 88 3e-022
gb|BG933512.1|BG933512 WS1_4_C09.b1_A002 Water-stressed 1 (... 67 6e-022
gb|CL177479.1|CL177479 104_384_10893857_116_31916_305 Sorgh... 105 6e-022
gb|CF427643.1|CF427643 PH1_16_E07.g1_A002 Phosphorous-defic... 65 2e-021
gb|CW442061.1|CW442061 fsbb001f161i13f0 Sorghum methylation... 87 3e-021
gb|CD225628.1|CD225628 CCC1_40_G02.g1_A007 Callus culture/c... 67 3e-021
gb|CW266820.1|CW266820 104_736_11232639_148_35285_052 Sorgh... 87 3e-021
gb|BE355343.1|BE355343 DG1_114_G02.b1_A002 Dark Grown 1 (DG... 64 4e-021
gb|CW307219.1|CW307219 104_795_11468026_116_36059_043 Sorgh... 87 7e-021
gb|AW286800.2|AW286800 LG1_206_F03.b1_A002 Light Grown 1 (L... 65 7e-021
>gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 5', mRNA sequence
Length = 800
Score = 314 bits (681), Expect(2) = 1e-085
Identities = 125/148 (84%), Positives = 132/148 (89%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 131 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 310
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GD KKEHQFDLWFDP+ADY
Sbjct: 311 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDSKKEHQFDLWFDPAADY 490
Query: 526 HTYTIIWNXTNILXXXXDLFXXXXKRYA 609
HTYTIIWN TNIL +LF KRYA
Sbjct: 491 HTYTIIWNPTNILFKVDNLFIRSFKRYA 574
Score = 246 bits (532), Expect(3) = 2e-068
Identities = 111/149 (74%), Positives = 112/149 (75%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL MKR RM V FQMMV*VW*SA GSN RSNWCSFL SPLAHTLV STTG P
Sbjct: 573 A*RLKDRMKRLSTLNRMFVGFQMMV*VW*SAAGSNHRSNWCSFLLSPLAHTLVLSTTG*P 394
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWS 249
+ L PEER*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWS
Sbjct: 393 VALPMNSMSISSCPSPSPEER*KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWS 214
Query: 248 RRSITTCWPESSYPVRTVPSVVNLLSSHD 162
R SITTCWPE SYP RTVPSVVNL S D
Sbjct: 213 RLSITTCWPELSYPSRTVPSVVNLAPSQD 127
Score = 176 bits (379), Expect(3) = 1e-049
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVAGR+VEA DGAGGVP DELHLDAELAV+VLLLGVEAG
Sbjct: 412 EHHRLTGGVAHELHVDLVVPVAVAGRKVEA*DGAGGVPADELHLDAELAVEVLLLGVEAG 233
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AGVLVEAEHHHLLA VVS ADGAVRGE KP
Sbjct: 232 GAGVLVEAEHHHLLAGTVVSLADGAVRGELGAKP 131
Score = 84.0 bits (177), Expect(4) = 1e-034
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 330 TFLPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 449
Score = 50.6 bits (104), Expect(4) = 1e-034
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 132 GLAPSSPRTAPSARDTTVPASRW*C 206
Score = 40.5 bits (82), Expect(4) = 1e-034
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 250 GAVPLRRVQHRDEAHPRE 303
Score = 35.0 bits (70), Expect(3) = 1e-049
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSC RRWPTRW
Sbjct: 452 APSCCRRWPTRW 417
Score = 28.6 bits (56), Expect(3) = 2e-068
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 77 ENAVPWCGCCSIEEL 33
Score = 28.1 bits (55), Expect(4) = 1e-034
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +PLH QALR
Sbjct: 511 EPYEHPVQGGQPLHPVLQALR 573
Score = 24.9 bits (48), Expect(3) = 1e-049
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 79 QRTRCHGVAAAL 44
Score = 24.0 bits (46), Expect(3) = 2e-068
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 127 LRRGGLQEREG 95
Score = 23.1 bits (44), Expect(2) = 1e-085
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 57 TPWHRVL 77
>gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 5', mRNA sequence
Length = 725
Score = 314 bits (681), Expect(2) = 1e-085
Identities = 125/148 (84%), Positives = 132/148 (89%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 131 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 310
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADY
Sbjct: 311 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADY 490
Query: 526 HTYTIIWNXTNILXXXXDLFXXXXKRYA 609
HTYTIIWN TNIL +L KRYA
Sbjct: 491 HTYTIIWNPTNILFKVDNLLIRSFKRYA 574
Score = 249 bits (539), Expect(3) = 3e-069
Identities = 111/149 (74%), Positives = 113/149 (75%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL M+R RM V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P
Sbjct: 573 A*RLKDRMRRLSTLNRMFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*P 394
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWS 249
+ L PEER*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWS
Sbjct: 393 VALPMNSMSISSCPSPSPEER*KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWS 214
Query: 248 RRSITTCWPESSYPVRTVPSVVNLLSSHD 162
R SITTCWPE SYP RTVPSVVNL S D
Sbjct: 213 RLSITTCWPELSYPSRTVPSVVNLAPSQD 127
Score = 176 bits (379), Expect(3) = 9e-051
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVAGR+VEA DGAGGVP DELHLDAELAV+VLLLGVEAG
Sbjct: 412 EHHRLTGGVAHELHVDLVVPVAVAGRKVEA*DGAGGVPADELHLDAELAVEVLLLGVEAG 233
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AGVLVEAEHHHLLA VVS ADGAVRGE KP
Sbjct: 232 GAGVLVEAEHHHLLAGTVVSLADGAVRGELGAKP 131
Score = 84.0 bits (177), Expect(4) = 1e-033
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 330 TFLPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 449
Score = 50.6 bits (104), Expect(4) = 1e-033
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 132 GLAPSSPRTAPSARDTTVPASRW*C 206
Score = 40.5 bits (82), Expect(4) = 1e-033
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 250 GAVPLRRVQHRDEAHPRE 303
Score = 38.6 bits (78), Expect(3) = 9e-051
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 452 APSCRRRWPTRW 417
Score = 28.6 bits (56), Expect(3) = 3e-069
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 77 ENAVPWCGCCSIEEL 33
Score = 24.9 bits (48), Expect(3) = 9e-051
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 79 QRTRCHGVAAAL 44
Score = 24.9 bits (48), Expect(4) = 1e-033
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +P H QALR
Sbjct: 511 EPYEHPVQGGQPPHPVLQALR 573
Score = 24.0 bits (46), Expect(3) = 3e-069
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 127 LRRGGLQEREG 95
Score = 23.1 bits (44), Expect(2) = 1e-085
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 57 TPWHRVL 77
>gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_D09_A002 5', mRNA sequence
Length = 751
Score = 306 bits (662), Expect(2) = 6e-083
Identities = 120/133 (90%), Positives = 126/133 (94%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 155 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 334
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADY
Sbjct: 335 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADY 514
Query: 526 HTYTIIWNXTNIL 564
HTYTIIWN TNIL
Sbjct: 515 HTYTIIWNPTNIL 553
Score = 241 bits (520), Expect(3) = 1e-066
Identities = 105/134 (78%), Positives = 106/134 (79%)
Frame = -3 / -2
Query: 563 RMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXX 384
RM V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P+ L
Sbjct: 552 RMFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*PVALPMNSMSISSCPS 373
Query: 383 XXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPV 204
PEER*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP
Sbjct: 372 PSPEER*KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPS 193
Query: 203 RTVPSVVNLLSSHD 162
RTVPSVVNL S D
Sbjct: 192 RTVPSVVNLAPSQD 151
Score = 176 bits (379), Expect(3) = 9e-051
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVAGR+VEA DGAGGVP DELHLDAELAV+VLLLGVEAG
Sbjct: 436 EHHRLTGGVAHELHVDLVVPVAVAGRKVEA*DGAGGVPADELHLDAELAVEVLLLGVEAG 257
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AGVLVEAEHHHLLA VVS ADGAVRGE KP
Sbjct: 256 GAGVLVEAEHHHLLAGTVVSLADGAVRGELGAKP 155
Score = 84.0 bits (177), Expect(3) = 2e-031
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 354 TFLPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 473
Score = 50.6 bits (104), Expect(3) = 2e-031
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 156 GLAPSSPRTAPSARDTTVPASRW*C 230
Score = 40.5 bits (82), Expect(3) = 2e-031
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 274 GAVPLRRVQHRDEAHPRE 327
Score = 38.6 bits (78), Expect(3) = 9e-051
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 476 APSCRRRWPTRW 441
Score = 28.6 bits (56), Expect(3) = 1e-066
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 101 ENAVPWCGCCSIEEL 57
Score = 24.9 bits (48), Expect(3) = 9e-051
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 103 QRTRCHGVAAAL 68
Score = 24.0 bits (46), Expect(3) = 1e-066
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 151 LRRGGLQEREG 119
Score = 23.1 bits (44), Expect(2) = 6e-083
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 81 TPWHRVL 101
>gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 304 bits (658), Expect(2) = 2e-082
Identities = 119/132 (90%), Positives = 125/132 (94%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 126 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 305
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADY
Sbjct: 306 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADY 485
Query: 526 HTYTIIWNXTNI 561
HTYTIIWN TNI
Sbjct: 486 HTYTIIWNPTNI 521
Score = 238 bits (515), Expect(3) = 5e-066
Identities = 104/133 (78%), Positives = 105/133 (78%)
Frame = -3 / -2
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P+ L
Sbjct: 520 MFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*PVALPMNSMSISSCPSP 341
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
PEER*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP R
Sbjct: 340 SPEER*KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSR 161
Query: 200 TVPSVVNLLSSHD 162
TVPSVVNL S D
Sbjct: 160 TVPSVVNLAPSQD 122
Score = 176 bits (379), Expect(3) = 9e-051
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVAGR+VEA DGAGGVP DELHLDAELAV+VLLLGVEAG
Sbjct: 407 EHHRLTGGVAHELHVDLVVPVAVAGRKVEA*DGAGGVPADELHLDAELAVEVLLLGVEAG 228
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AGVLVEAEHHHLLA VVS ADGAVRGE KP
Sbjct: 227 GAGVLVEAEHHHLLAGTVVSLADGAVRGELGAKP 126
Score = 84.0 bits (177), Expect(3) = 2e-031
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 325 TFLPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 444
Score = 50.6 bits (104), Expect(3) = 2e-031
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 127 GLAPSSPRTAPSARDTTVPASRW*C 201
Score = 40.5 bits (82), Expect(3) = 2e-031
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 245 GAVPLRRVQHRDEAHPRE 298
Score = 38.6 bits (78), Expect(3) = 9e-051
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 447 APSCRRRWPTRW 412
Score = 28.6 bits (56), Expect(3) = 5e-066
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 72 ENAVPWCGCCSIEEL 28
Score = 24.9 bits (48), Expect(3) = 9e-051
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 74 QRTRCHGVAAAL 39
Score = 24.0 bits (46), Expect(3) = 5e-066
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 122 LRRGGLQEREG 90
Score = 23.1 bits (44), Expect(2) = 2e-082
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +1
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 52 TPWHRVL 72
>gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114967, DNA
sequence
Length = 581
Score = 171 bits (367), Expect(2) = 5e-081
Identities = 66/81 (81%), Positives = 71/81 (87%)
Frame = +1 / -1
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
LSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIW
Sbjct: 248 LSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIW 69
Query: 547 NXTNILXXXXDLFXXXXKRYA 609
N TNIL +LF KRYA
Sbjct: 68 NPTNILFKVDNLFIRSFKRYA 6
Score = 151 bits (325), Expect(2) = 5e-081
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +1 / -2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 562 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 383
Query: 346 GTVSCFYLS 372
GTVSCFY+S
Sbjct: 382 GTVSCFYVS 356
Score = 148 bits (318), Expect(2) = 6e-060
Identities = 61/68 (89%), Positives = 61/68 (89%)
Frame = -3 / +3
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSV 186
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSV
Sbjct: 363 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSV 542
Query: 185 VNLLSSHD 162
VNL S D
Sbjct: 543 VNLAPSQD 566
Score = 126 bits (269), Expect(3) = 1e-044
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = -2 / +2
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVR 187
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VVS ADGAVR
Sbjct: 362 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVVSLADGAVR 541
Query: 186 GEPPVKP 166
GE KP
Sbjct: 542 GELGAKP 562
Score = 105 bits (223), Expect(2) = 6e-060
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -3 / +1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL MKR RM V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P
Sbjct: 7 A*RLKDRMKRLSTLNRMFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*P 186
Query: 428 LEL 420
+ L
Sbjct: 187 VAL 195
Score = 82.6 bits (174), Expect(4) = 6e-034
Identities = 32/38 (84%), Positives = 32/38 (84%)
Frame = +2 / -2
Query: 371 LPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 244 LPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 131
Score = 54.7 bits (113), Expect(3) = 1e-044
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / +3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVE 361
+HHRL VAHELHVDLV PVAVAGR+++
Sbjct: 168 EHHRLTGGVAHELHVDLVVPVAVAGRKLQ 254
Score = 50.6 bits (104), Expect(4) = 6e-034
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / -3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 561 GLAPSSPRTAPSARDTTVPASRW*C 487
Score = 40.5 bits (82), Expect(4) = 6e-034
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / -1
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 443 GAVPLRRVQHRDEAHPRE 390
Score = 38.6 bits (78), Expect(3) = 1e-044
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 128 APSCRRRWPTRW 163
Score = 28.1 bits (55), Expect(4) = 6e-034
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / -3
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +PLH QALR
Sbjct: 69 EPYEHPVQGGQPLHPVLQALR 7
>gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467109, DNA
sequence
Length = 702
Score = 171 bits (367), Expect(2) = 3e-079
Identities = 66/81 (81%), Positives = 71/81 (87%)
Frame = +1 / +3
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
LSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIW
Sbjct: 303 LSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIW 482
Query: 547 NXTNILXXXXDLFXXXXKRYA 609
N TNIL +LF KRYA
Sbjct: 483 NPTNILFKVDNLFIRSFKRYA 545
Score = 145 bits (312), Expect(2) = 3e-079
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +1 / +1
Query: 178 RFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVS 357
+FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSAGTVS
Sbjct: 1 KFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSAGTVS 180
Query: 358 CFYLS 372
CFY+S
Sbjct: 181 CFYVS 195
Score = 143 bits (306), Expect(3) = 2e-069
Identities = 58/62 (93%), Positives = 58/62 (93%)
Frame = -3 / -2
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSV 186
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSV
Sbjct: 188 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSV 9
Query: 185 VN 180
VN
Sbjct: 8 VN 3
Score = 122 bits (262), Expect(2) = 2e-032
Identities = 55/62 (88%), Positives = 56/62 (90%)
Frame = -2 / -1
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVR 187
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VVS ADGAVR
Sbjct: 189 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVVSLADGAVR 10
Query: 186 GE 181
GE
Sbjct: 9 GE 4
Score = 105 bits (223), Expect(3) = 2e-069
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL MKR RM V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P
Sbjct: 544 A*RLKDRMKRLSTLNRMFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*P 365
Query: 428 LEL 420
+ L
Sbjct: 364 VAL 356
Score = 82.6 bits (174), Expect(4) = 1e-032
Identities = 32/38 (84%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 371 LPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 307 LPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 420
Score = 54.7 bits (113), Expect(3) = 2e-069
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVE 361
+HHRL VAHELHVDLV PVAVAGR+++
Sbjct: 383 EHHRLTGGVAHELHVDLVVPVAVAGRKLQ 297
Score = 46.9 bits (96), Expect(4) = 1e-032
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2 / +2
Query: 182 SPRTAPSARDTTIRASRW*C 241
SPRTAPSARDTT+ ASRW*C
Sbjct: 5 SPRTAPSARDTTVPASRW*C 64
Score = 40.5 bits (82), Expect(4) = 1e-032
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 108 GAVPLRRVQHRDEAHPRE 161
Score = 38.6 bits (78), Expect(2) = 2e-032
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 423 APSCRRRWPTRW 388
Score = 28.1 bits (55), Expect(4) = 1e-032
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +2
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +PLH QALR
Sbjct: 482 EPYEHPVQGGQPLHPVLQALR 544
>gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 5', mRNA sequence
Length = 826
Score = 241 bits (521), Expect(2) = 2e-074
Identities = 96/117 (82%), Positives = 102/117 (87%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 264 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 443
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 444 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 614
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 78/114 (68%), Positives = 80/114 (70%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 613 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 434
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 433 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 272
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 452 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 273
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 272 AGAAVEVEHRHLRAGLVVV 216
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 370 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 489
Score = 59.3 bits (123), Expect(2) = 2e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 174 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 275
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 272 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 135
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 290 GAVPLRPVQRPDEAHP 337
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 492 APSCRRRWPTR 460
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 175 GSTRSSARTAPSAPTTTSPARRWRC 249
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 213 CGRCRPC*TS 184
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +2
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 551 EPDQHPLQGGRQRDPRLQALR 613
>gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 5', mRNA sequence
Length = 806
Score = 241 bits (521), Expect(2) = 2e-074
Identities = 96/117 (82%), Positives = 102/117 (87%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 266 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 445
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 446 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 616
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 78/114 (68%), Positives = 80/114 (70%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 615 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 436
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 435 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 274
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 454 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 275
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 274 AGAAVEVEHRHLRAGLVVV 218
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 372 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 491
Score = 59.3 bits (123), Expect(2) = 2e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 176 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 277
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -2
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 274 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 137
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 292 GAVPLRPVQRPDEAHP 339
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 494 APSCRRRWPTR 462
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 177 GSTRSSARTAPSAPTTTSPARRWRC 251
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 215 CGRCRPC*TS 186
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 553 EPDQHPLQGGRQRDPRLQALR 615
>gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_F01_A002 5', mRNA sequence
Length = 643
Score = 241 bits (521), Expect(2) = 2e-074
Identities = 96/117 (82%), Positives = 102/117 (87%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 258 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 437
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 438 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 608
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 78/114 (68%), Positives = 80/114 (70%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 607 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 428
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 427 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 266
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 446 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 267
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 266 AGAAVEVEHRHLRAGLVVV 210
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 364 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 483
Score = 59.3 bits (123), Expect(2) = 2e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 168 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 269
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 266 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 129
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 284 GAVPLRPVQRPDEAHP 331
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 486 APSCRRRWPTR 454
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 169 GSTRSSARTAPSAPTTTSPARRWRC 243
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 207 CGRCRPC*TS 178
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +2
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 545 EPDQHPLQGGRQRDPRLQALR 607
>gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 624
Score = 241 bits (521), Expect(2) = 2e-074
Identities = 96/117 (82%), Positives = 102/117 (87%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 271 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 450
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 451 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 621
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 78/114 (68%), Positives = 80/114 (70%)
Frame = -3 / -2
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 620 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 441
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 440 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 279
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 459 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 280
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 279 AGAAVEVEHRHLRAGLVVV 223
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +2
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 377 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 496
Score = 59.3 bits (123), Expect(2) = 2e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 181 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 282
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -1
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 279 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 142
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 297 GAVPLRPVQRPDEAHP 344
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 499 APSCRRRWPTR 467
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 182 GSTRSSARTAPSAPTTTSPARRWRC 256
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 220 CGRCRPC*TS 191
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +3
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 558 EPDQHPLQGGRQRDPRLQALR 620
>gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_C10_A012 5', mRNA sequence
Length = 681
Score = 241 bits (520), Expect(2) = 2e-074
Identities = 95/117 (81%), Positives = 102/117 (87%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 278 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 457
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTI+WN TNIL D KRYA
Sbjct: 458 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIVWNPTNILFKVDDNVIRVFKRYA 628
Score = 164 bits (352), Expect(2) = 8e-049
Identities = 77/114 (67%), Positives = 79/114 (69%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQ MV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 627 A*RLKTRITLSSTLKRMLVGFQTMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 448
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 447 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 286
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 466 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 287
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 286 AGAAVEVEHRHLRAGLVVV 230
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 384 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 503
Score = 59.3 bits (123), Expect(2) = 2e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 188 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 289
Score = 51.0 bits (105), Expect(2) = 8e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 286 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 149
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 304 GAVPLRPVQRPDEAHP 351
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 506 APSCRRRWPTR 474
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 189 GSTRSSARTAPSAPTTTSPARRWRC 263
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 227 CGRCRPC*TS 198
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 565 EPDQHPLQGGRQRDPRLQALR 627
>gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 5', mRNA sequence
Length = 804
Score = 240 bits (518), Expect(2) = 5e-074
Identities = 95/117 (81%), Positives = 102/117 (87%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEF+GN++GQP
Sbjct: 263 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFLGNATGQP 442
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 443 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 613
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 78/114 (68%), Positives = 80/114 (70%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 612 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 433
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 432 VALPRNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 271
Score = 114 bits (244), Expect(3) = 4e-031
Identities = 52/79 (65%), Positives = 58/79 (73%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VA ELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 451 EHHRLPRGVAQELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 272
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 271 AGAAVEVEHRHLRAGLVVV 215
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 369 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 488
Score = 59.3 bits (123), Expect(2) = 5e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 173 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 274
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 271 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 134
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 289 GAVPLRPVQRPDEAHP 336
Score = 33.6 bits (67), Expect(3) = 4e-031
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 491 APSCRRRWPTR 459
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 174 GSTRSSARTAPSAPTTTSPARRWRC 248
Score = 25.4 bits (49), Expect(3) = 4e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 212 CGRCRPC*TS 183
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 550 EPDQHPLQGGRQRDPRLQALR 612
>gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_F09_A002 5', mRNA sequence
Length = 764
Score = 239 bits (517), Expect(2) = 6e-074
Identities = 95/117 (81%), Positives = 101/117 (86%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 272 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 451
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNI D KRYA
Sbjct: 452 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNIFFKVDDNVIRVFKRYA 622
Score = 165 bits (355), Expect(2) = 3e-049
Identities = 77/114 (67%), Positives = 80/114 (70%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S +MLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 621 A*RLKTRITLSSTLKKMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 442
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 441 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 280
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 460 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 281
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 280 AGAAVEVEHRHLRAGLVVV 224
Score = 79.4 bits (167), Expect(3) = 2e-023
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 378 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 497
Score = 59.3 bits (123), Expect(2) = 6e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 182 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 283
Score = 51.0 bits (105), Expect(2) = 3e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -2
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 280 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 143
Score = 35.0 bits (70), Expect(3) = 2e-023
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 298 GAVPLRPVQRPDEAHP 345
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 500 APSCRRRWPTR 468
Score = 33.1 bits (66), Expect(3) = 2e-023
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 183 GSTRSSARTAPSAPTTTSPARRWRC 257
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 221 CGRCRPC*TS 192
>gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 5', mRNA sequence
Length = 810
Score = 239 bits (516), Expect(2) = 9e-074
Identities = 95/117 (81%), Positives = 102/117 (87%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGF+SKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 248 SSGAGFDSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 427
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 428 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 598
Score = 164 bits (352), Expect(2) = 8e-049
Identities = 77/114 (67%), Positives = 79/114 (69%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 597 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 418
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PEER*K ETVPAE P MSFI TLN P*RYCSLE KPA
Sbjct: 417 VALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RYCSLESKPA 256
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 436 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 257
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 256 AGAAVEVEHRHLRAGLVVV 200
Score = 79.4 bits (167), Expect(4) = 1e-025
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 354 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 473
Score = 59.3 bits (123), Expect(2) = 9e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 158 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 259
Score = 51.0 bits (105), Expect(2) = 8e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 256 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 119
Score = 35.0 bits (70), Expect(4) = 1e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 274 GAVPLRPVQRPDEAHP 321
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 476 APSCRRRWPTR 444
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 159 GSTRSSARTAPSAPTTTSPARRWRC 233
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 197 CGRCRPC*TS 168
Score = 24.9 bits (48), Expect(4) = 1e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 535 EPDQHPLQGGRQRDPRLQALR 597
>gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_H05_A002 5', mRNA sequence
Length = 676
Score = 239 bits (516), Expect(2) = 9e-074
Identities = 95/117 (81%), Positives = 101/117 (86%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYL SGDGDG DEIDMEFMGN++GQP
Sbjct: 252 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLCSGDGDGHDEIDMEFMGNATGQP 431
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNIL D KRYA
Sbjct: 432 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYA 602
Score = 165 bits (355), Expect(2) = 3e-049
Identities = 77/114 (67%), Positives = 80/114 (70%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 601 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 422
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
+ L PE+R*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 421 VALPMNSMSISSCPSPSPEQR*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 260
Score = 115 bits (246), Expect(3) = 2e-031
Identities = 52/79 (65%), Positives = 58/79 (73%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA +VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 440 EHHRLPRGVAHELHVDLVMPVAVARTKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 261
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 260 AGAAVEVEHRHLRAGLVVV 204
Score = 76.7 bits (161), Expect(4) = 6e-025
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T + ATATG TRSTWSSWAT G+RWC T TCGP ATARR
Sbjct: 358 TFVLATATGMTRSTWSSWATPRGNRWCSTQTCGPTATARR 477
Score = 59.3 bits (123), Expect(2) = 9e-074
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 162 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 263
Score = 51.0 bits (105), Expect(2) = 3e-049
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 260 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 123
Score = 35.0 bits (70), Expect(4) = 6e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 278 GAVPLRPVQRPDEAHP 325
Score = 33.6 bits (67), Expect(3) = 2e-031
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 480 APSCRRRWPTR 448
Score = 33.1 bits (66), Expect(4) = 6e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 163 GSTRSSARTAPSAPTTTSPARRWRC 237
Score = 25.4 bits (49), Expect(3) = 2e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 201 CGRCRPC*TS 172
Score = 24.9 bits (48), Expect(4) = 6e-025
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +2
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EPDQHP R QALR
Sbjct: 539 EPDQHPLQGGRQRDPRLQALR 601
>gb|BE359862.1|BE359862 DG1_58_G02.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 228 bits (492), Expect(2) = 8e-070
Identities = 88/100 (88%), Positives = 94/100 (94%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDME MGN++GQP
Sbjct: 261 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMELMGNATGQP 440
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTN 558
VVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TN
Sbjct: 441 VVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTN 560
Score = 157 bits (337), Expect(2) = 1e-045
Identities = 71/97 (73%), Positives = 72/97 (74%)
Frame = -3 / -2
Query: 557 LVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXX 378
LV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP+ L
Sbjct: 559 LVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCPVALPMSSMSISSCPSPS 380
Query: 377 PEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
PEER*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 379 PEER*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 269
Score = 118 bits (253), Expect(3) = 2e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 449 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 270
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 269 AGAAVEVEHRHMRAGLVVV 213
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 367 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 486
Score = 57.0 bits (118), Expect(2) = 8e-070
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG V ML LD+ SGA
Sbjct: 171 WLYEKFSTDGTVRTNYDESGAHVAMLNLDRSSGA 272
Score = 46.9 bits (96), Expect(2) = 1e-045
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / -2
Query: 266 APECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
APE SR SI TC P+SS VRTVPSV+N SH+
Sbjct: 271 APELRSRLSIATCAPDSS*LVRTVPSVLNFS*SHE 167
Score = 35.0 bits (70), Expect(3) = 1e-022
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 287 GAVPLRPVQRPDEAHP 334
Score = 33.6 bits (67), Expect(3) = 2e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 489 APSCRRRWPTR 457
Score = 30.4 bits (60), Expect(3) = 1e-022
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A W C
Sbjct: 172 GSTRSSARTAPSAPTTTSPARMWRC 246
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 210 CGRCRPC*TS 181
>gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 473
Score = 258 bits (558), Expect(2) = 1e-068
Identities = 102/113 (90%), Positives = 107/113 (94%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 134 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 313
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLW 504
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLW
Sbjct: 314 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLW 472
Score = 205 bits (442), Expect(3) = 5e-056
Identities = 88/113 (77%), Positives = 89/113 (78%)
Frame = -3 / -3
Query: 500 RSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSF 321
RSNWCSFLPSPLAHTLV STTG P+ L PEER*KHETVPAEFPRMSF
Sbjct: 468 RSNWCSFLPSPLAHTLVLSTTG*PVALPMNSMSISSCPSPSPEER*KHETVPAEFPRMSF 289
Query: 320 ISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
IS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSVVNL S D
Sbjct: 288 ISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSVVNLAPSQD 130
Score = 176 bits (379), Expect(3) = 9e-051
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVAGR+VEA DGAGGVP DELHLDAELAV+VLLLGVEAG
Sbjct: 415 EHHRLTGGVAHELHVDLVVPVAVAGRKVEA*DGAGGVPADELHLDAELAVEVLLLGVEAG 236
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AGVLVEAEHHHLLA VVS ADGAVRGE KP
Sbjct: 235 GAGVLVEAEHHHLLAGTVVSLADGAVRGELGAKP 134
Score = 84.0 bits (177), Expect(3) = 2e-031
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 333 TFLPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 452
Score = 50.6 bits (104), Expect(3) = 2e-031
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 135 GLAPSSPRTAPSARDTTVPASRW*C 209
Score = 40.5 bits (82), Expect(3) = 2e-031
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 253 GAVPLRRVQHRDEAHPRE 306
Score = 38.6 bits (78), Expect(3) = 9e-051
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 455 APSCRRRWPTRW 420
Score = 28.6 bits (56), Expect(3) = 5e-056
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 80 ENAVPWCGCCSIEEL 36
Score = 24.9 bits (48), Expect(3) = 9e-051
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 82 QRTRCHGVAAAL 47
Score = 24.0 bits (46), Expect(3) = 5e-056
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 130 LRRGGLQEREG 98
Score = 23.1 bits (44), Expect(2) = 1e-068
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 60 TPWHRVL 80
>gb|CN151800.1|CN151800 WOUND1_77_E10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_77_E10_A002 5', mRNA sequence
Length = 650
Score = 220 bits (474), Expect(2) = 2e-067
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNS+EQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 361 SSGAGFNSREQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 540
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
VLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIW
Sbjct: 541 EVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIW 648
Score = 151 bits (325), Expect(2) = 2e-043
Identities = 68/94 (72%), Positives = 70/94 (74%)
Frame = -3 / -1
Query: 548 FQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEE 369
FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V ST+GCP+ L PEE
Sbjct: 650 FQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTSGCPVALPMNSMSISSCPSPSPEE 471
Query: 368 R*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
R*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 470 R*KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 369
Score = 110 bits (234), Expect(3) = 9e-030
Identities = 51/79 (64%), Positives = 57/79 (72%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H RLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLL GVEAG
Sbjct: 549 EHLRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLPGVEAG 370
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 369 AGAAVEVEHRHLRAGLVVV 313
Score = 73.0 bits (153), Expect(3) = 1e-021
Identities = 31/40 (77%), Positives = 31/40 (77%)
Frame = +2 / +2
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSR C T TCGP ATARR
Sbjct: 467 TFLLATATGMTRSTWSSWATPRGSRRCSTQTCGPTATARR 586
Score = 57.0 bits (118), Expect(2) = 2e-067
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+ G QV ML LD+ SGA
Sbjct: 271 WLYEKFSTDGTVRTNYDEPGAQVAMLNLDRSSGA 372
Score = 45.1 bits (92), Expect(2) = 2e-043
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = -3 / -1
Query: 266 APECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
APE SR SI TC P SS VRTVPSV+N SH+
Sbjct: 371 APELRSRLSIATCAPGSS*LVRTVPSVLNFS*SHE 267
Score = 35.0 bits (70), Expect(3) = 1e-021
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 387 GAVPLRPVQRPDEAHP 434
Score = 33.6 bits (67), Expect(3) = 9e-030
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 589 APSCRRRWPTR 557
Score = 33.1 bits (66), Expect(3) = 1e-021
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 272 GSTRSSARTAPSAPTTTSPARRWRC 346
Score = 25.4 bits (49), Expect(3) = 9e-030
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 310 CGRCRPC*TS 281
>gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 463
Score = 251 bits (543), Expect(2) = 1e-066
Identities = 100/111 (90%), Positives = 105/111 (94%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 130 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 309
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFD 498
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFD
Sbjct: 310 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFD 462
Score = 196 bits (423), Expect(2) = 1e-051
Identities = 85/112 (75%), Positives = 87/112 (77%)
Frame = -3 / -3
Query: 497 SNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFI 318
SNWCSFLPSPLAHTLV STTG P+ L P+ER*KHETVPAEFPRMSFI
Sbjct: 461 SNWCSFLPSPLAHTLVLSTTG*PVALPMNSMSISSCPSPSPDER*KHETVPAEFPRMSFI 282
Query: 317 STLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
S LNSP*RYCSLELKPAAPECWSR SITTCWPE S P RTVPSVVNL S D
Sbjct: 281 SMLNSP*RYCSLELKPAAPECWSRLSITTCWPELS*PSRTVPSVVNLAPSQD 126
Score = 170 bits (366), Expect(3) = 5e-049
Identities = 76/94 (80%), Positives = 80/94 (85%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVA +VEA DGAGGVPPDELHLDAELAV+VLLLGVEAG
Sbjct: 411 EHHRLTGGVAHELHVDLVVPVAVAR*KVEA*DGAGGVPPDELHLDAELAVEVLLLGVEAG 232
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
A VLVEAEHHHLLAR VV+ ADGAVRGE KP
Sbjct: 231 GARVLVEAEHHHLLARAVVTLADGAVRGELGAKP 130
Score = 77.6 bits (163), Expect(3) = 7e-030
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 377 ATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
ATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 341 ATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 448
Score = 47.8 bits (98), Expect(3) = 7e-030
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSAR TT RASRW*C
Sbjct: 131 GLAPSSPRTAPSARVTTARASRW*C 205
Score = 44.1 bits (90), Expect(3) = 7e-030
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHPGE
Sbjct: 249 GAVPLRRVQHRDEAHPGE 302
Score = 38.6 bits (78), Expect(3) = 5e-049
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 451 APSCRRRWPTRW 416
Score = 27.6 bits (54), Expect(2) = 1e-051
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C AL
Sbjct: 76 ENAVPWCGCCFRGAL 32
Score = 24.9 bits (48), Expect(3) = 5e-049
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 78 QRTRCHGVAAAL 43
Score = 23.1 bits (44), Expect(2) = 1e-066
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +2
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 56 TPWHRVL 76
>gb|CW219580.1|CW219580 104_653_11196859_116_37141_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196859, DNA
sequence
Length = 525
Score = 142 bits (304), Expect(2) = 1e-065
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +1 / -3
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
LSSGDGDG DEIDMEFMG ++G PVVLN+NVWA+GDGKKEHQFDLWFDP+ADYHTYTIIW
Sbjct: 181 LSSGDGDGHDEIDMEFMGTATGHPVVLNSNVWANGDGKKEHQFDLWFDPAADYHTYTIIW 2
Score = 133 bits (285), Expect(3) = 4e-058
Identities = 55/67 (82%), Positives = 57/67 (85%)
Frame = -3 / +2
Query: 362 KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSVV 183
KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAP+CWSR ITTCW E SYP RTVPSV
Sbjct: 299 KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPDCWSRLIITTCWLELSYPSRTVPSVE 478
Query: 182 NLLSSHD 162
+L S D
Sbjct: 479 SLEPSQD 499
Score = 129 bits (276), Expect(2) = 1e-065
Identities = 53/69 (76%), Positives = 59/69 (85%)
Frame = +1 / -1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL + +TDGTVR GYD S QQVVM+ LDQ SGAAGFNSKEQYL GEFS+EMKL+RGNSA
Sbjct: 495 WLGSKLSTDGTVREGYDSSSQQVVMISLDQQSGAAGFNSKEQYL*GEFSIEMKLMRGNSA 316
Query: 346 GTVSCFYLS 372
GTVSCF +S
Sbjct: 315 GTVSCFSVS 289
Score = 98.2 bits (208), Expect(2) = 4e-025
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = -2 / +1
Query: 363 EARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVRG 184
EA D AGGVP ELHL+AELA++VLLLGVEAG A +LVEA+HHHLLA VVS AD AVRG
Sbjct: 298 EA*DCAGGVPAHELHLNAELALEVLLLGVEAGCA*LLVEADHHHLLAGTVVSLADCAVRG 477
Query: 183 E 181
E
Sbjct: 478 E 480
Score = 82.2 bits (173), Expect(3) = 4e-058
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -3 / +3
Query: 545 QMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPL 426
QMMV*VW*SA GSN RSNWCSFLPSPLAHTL STTG P+
Sbjct: 3 QMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLELSTTG*PV 122
Score = 78.5 bits (165), Expect(3) = 7e-024
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = +2 / -1
Query: 371 LPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
LPATATG TRSTWSSWA +RWC TPTCGP ATARR
Sbjct: 177 LPATATGTTRSTWSSWAPPPVTRWCSTPTCGPTATARR 64
Score = 49.2 bits (101), Expect(3) = 4e-058
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2 / +2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREV 364
+HHR+ AHELHVDLV PVAVAGR++
Sbjct: 101 EHHRVTGGGAHELHVDLVVPVAVAGRKL 184
Score = 39.1 bits (79), Expect(3) = 7e-024
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / -2
Query: 182 SPRTAPSARDTTIRASRW* 238
SPRTA SARDTT+ ASRW*
Sbjct: 479 SPRTAQSARDTTVPASRW* 423
Score = 38.6 bits (78), Expect(2) = 4e-025
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 61 APSCRRRWPTRW 96
Score = 32.7 bits (65), Expect(3) = 7e-024
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ DEAH E
Sbjct: 376 GAVPLRRVQH*DEAHARE 323
>gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 525
Score = 210 bits (454), Expect(2) = 1e-062
Identities = 80/104 (76%), Positives = 92/104 (88%)
Frame = +1 / +1
Query: 274 FNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNT 453
F S+++YLYGEFS++MKLI GNSAGTV+ FYL+SGDGDG DEIDMEFMGNSSG PVVLNT
Sbjct: 202 FRSRQRYLYGEFSIQMKLIPGNSAGTVTSFYLTSGDGDGHDEIDMEFMGNSSGDPVVLNT 381
Query: 454 NVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLF 585
NVWA+GDGKKEHQF LWFDP+AD+HTYTIIWN N++ DLF
Sbjct: 382 NVWANGDGKKEHQFYLWFDPAADFHTYTIIWNDKNVIFKVDDLF 513
Score = 135 bits (290), Expect(2) = 2e-040
Identities = 66/105 (62%), Positives = 68/105 (64%)
Frame = -3 / -2
Query: 587 MKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXX 408
MKRS + FQMMV*VW SA GSNQR NWCSFLPSPLAHTLV STTG PLEL
Sbjct: 515 MKRSSTLKMTFLSFQMMV*VWKSAAGSNQR*NWCSFLPSPLAHTLVLSTTGSPLELPMNS 336
Query: 407 XXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELK 273
PE R*K TVPAE P MSFI LNSP*RY +LK
Sbjct: 335 MSISSCPSPSPEVR*KEVTVPAELPGMSFIWMLNSP*RYLWRDLK 201
Score = 102 bits (217), Expect(2) = 1e-026
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H + A VAHELHVDLV PVAVAG EVE DGAGGV DELHLDAELAV+V L G E
Sbjct: 375 EHDGVAAGVAHELHVDLVVPVAVAGGEVEGGDGAGGVAGDELHLDAELAVEVPLAGPEGA 196
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ ++ + H L R+VV
Sbjct: 195 AGLLVQDQRRHLLALRVVV 139
Score = 51.0 bits (105), Expect(2) = 2e-040
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -3 / -2
Query: 269 AAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
A P+CW R S TCWP + RT+PSVVN SH+
Sbjct: 200 APPDCWFRISDVTCWPSAL*SARTLPSVVNFSYSHE 93
Score = 50.6 bits (104), Expect(2) = 1e-062
Identities = 23/61 (37%), Positives = 26/61 (42%)
Frame = +1 / +1
Query: 88 MAPRXXXXXXXXXXXXXXXXXXXXXXWLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
MA R WL +FTTDG VR Y+ GQQV L L+Q SG
Sbjct: 19 MARRAVSVAVVALALLAAATAASADSWLYEKFTTDGNVRADYNAEGQQVTSLILNQQSGG 198
Query: 268 A 270
A
Sbjct: 199 A 201
Score = 38.6 bits (78), Expect(2) = 1e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 415 APSCRRRWPTRW 380
>gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 452
Score = 232 bits (500), Expect(2) = 9e-061
Identities = 92/104 (88%), Positives = 98/104 (94%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 139 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 318
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDG 477
GTVSCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTN+WA+GDG
Sbjct: 319 GTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNMWANGDG 450
Score = 175 bits (377), Expect(2) = 2e-044
Identities = 78/106 (73%), Positives = 80/106 (75%)
Frame = -3 / -1
Query: 479 LPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP 300
LPSPLAH LV STTG P+ L P+ER*KHETVPAEFPRMSFIS LNSP
Sbjct: 452 LPSPLAHMLVLSTTG*PVALPMNSMSISSCPSPSPDER*KHETVPAEFPRMSFISMLNSP 273
Query: 299 *RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
*RYCSLELKPAAPECWSR SITTCWPE S P RTVPSVVNL S D
Sbjct: 272 *RYCSLELKPAAPECWSRLSITTCWPELS*PSRTVPSVVNLAPSQD 135
Score = 170 bits (366), Expect(3) = 1e-046
Identities = 76/94 (80%), Positives = 80/94 (85%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVA +VEA DGAGGVPPDELHLDAELAV+VLLLGVEAG
Sbjct: 420 EHHRLTGGVAHELHVDLVVPVAVAR*KVEA*DGAGGVPPDELHLDAELAVEVLLLGVEAG 241
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
A VLVEAEHHHLLAR VV+ ADGAVRGE KP
Sbjct: 240 GARVLVEAEHHHLLARAVVTLADGAVRGELGAKP 139
Score = 73.0 bits (153), Expect(3) = 1e-028
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 377 ATATGATRSTWSSWATRAGSRWC*TPTCGPAATA 478
ATATG TRSTWSSWAT SRWC TPTCGP ATA
Sbjct: 350 ATATGTTRSTWSSWATPPVSRWCSTPTCGPTATA 451
Score = 47.8 bits (98), Expect(3) = 1e-028
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSAR TT RASRW*C
Sbjct: 140 GLAPSSPRTAPSARVTTARASRW*C 214
Score = 44.1 bits (90), Expect(3) = 1e-028
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHPGE
Sbjct: 258 GAVPLRRVQHRDEAHPGE 311
Score = 28.1 bits (55), Expect(3) = 1e-046
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 478 CRRRWPTRW 452
CRRRWPT W
Sbjct: 451 CRRRWPTCW 425
Score = 27.6 bits (54), Expect(3) = 1e-046
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C AL
Sbjct: 85 ENAVPWCGCCFRGAL 41
Score = 24.9 bits (48), Expect(2) = 2e-044
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 87 QRTRCHGVAAAL 52
Score = 23.1 bits (44), Expect(2) = 9e-061
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +2
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 65 TPWHRVL 85
>gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H10_A007 5', mRNA sequence
Length = 621
Score = 207 bits (446), Expect(2) = 3e-060
Identities = 82/117 (70%), Positives = 92/117 (78%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNS +YL+GEFSVEMKL+ GNSAGTV+ FYL+SG+GD DEIDMEFMGNSSG P
Sbjct: 249 SSGAGFNSTRKYLFGEFSVEMKLVAGNSAGTVTSFYLTSGEGDEHDEIDMEFMGNSSGSP 428
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VLNTNVWASGDGKKEHQF LWFDP+AD+H Y I WN NI+ D+ KRYA
Sbjct: 429 TVLNTNVWASGDGKKEHQFYLWFDPAADFHKYKITWNDKNIIFQVDDVTVRVFKRYA 599
Score = 130 bits (278), Expect(2) = 8e-037
Identities = 63/114 (55%), Positives = 70/114 (61%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL S M + FQ+++ +W SA GSN R NWCSFLPSPLAHTLV ST G P
Sbjct: 598 A*RLKTRTVTSSTWKMMFLSFQVILYLWKSAAGSNHR*NWCSFLPSPLAHTLVLSTVGDP 419
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
LEL P+ R*K TVPAE P SFISTLNSP RY +ELKPA
Sbjct: 418 LELPMNSMSISSCSSPSPDVR*KEVTVPAELPATSFISTLNSPKRYLRVELKPA 257
Score = 97.3 bits (206), Expect(3) = 4e-027
Identities = 45/79 (56%), Positives = 54/79 (68%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H R PA VAHELHVDLV VA+AGR+VE D AGGV DELHLDAELA +VL GVEA
Sbjct: 437 EHRRRPAGVAHELHVDLVVLVALAGRQVEGGDSAGGVAGDELHLDAELAEEVLAGGVEAS 258
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ ++ + H +VV
Sbjct: 257 ARTLVEDQRRHLPARTVVV 201
Score = 46.0 bits (94), Expect(2) = 3e-060
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 181 FTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
FTTDG VR YD SG+QV L LDQ SGA
Sbjct: 174 FTTDGDVRKDYDGSGRQVASLVLDQSSGA 260
Score = 44.6 bits (91), Expect(2) = 8e-037
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = -3 / -3
Query: 266 APECWSRRSITTCWPESSYPVRTVPSVVNLLSSH 165
APE WSR S TC PE S +RT PSVVN S +
Sbjct: 259 APELWSRTSDATCRPEPS*SLRTSPSVVNSSSQN 158
Score = 38.6 bits (78), Expect(3) = 4e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 477 APSCRRRWPTRW 442
Score = 24.0 bits (46), Expect(3) = 4e-027
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 205 CGRCRPW*T 179
CGR RPW*T
Sbjct: 198 CGRRRPW*T 172
>gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 201 bits (433), Expect(2) = 8e-060
Identities = 76/92 (82%), Positives = 86/92 (93%)
Frame = +1 / +3
Query: 274 FNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNT 453
F S+++YLYGEFS++MKLI GNSAGTV+ FYL+SGDGDG DEIDMEFMGNSSG PVVLNT
Sbjct: 294 FRSRQRYLYGEFSIQMKLIPGNSAGTVTSFYLTSGDGDGHDEIDMEFMGNSSGDPVVLNT 473
Query: 454 NVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 549
NVWA+GDGKKEHQF LWFDP+AD+HTYTIIWN
Sbjct: 474 NVWANGDGKKEHQFYLWFDPAADFHTYTIIWN 569
Score = 128 bits (274), Expect(2) = 4e-038
Identities = 62/92 (67%), Positives = 63/92 (68%)
Frame = -3 / -1
Query: 548 FQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEE 369
FQMMV*VW SA GSNQR NWCSFLPSPLAHTLV STTG PLEL PE
Sbjct: 568 FQMMV*VWKSAAGSNQR*NWCSFLPSPLAHTLVLSTTGSPLELPMNSMSISSCPSPSPEV 389
Query: 368 R*KHETVPAEFPRMSFISTLNSP*RYCSLELK 273
R*K TVPAE P MSFI LNSP*RY +LK
Sbjct: 388 R*KEVTVPAELPGMSFIWMLNSP*RYLWRDLK 293
Score = 102 bits (217), Expect(2) = 1e-026
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H + A VAHELHVDLV PVAVAG EVE DGAGGV DELHLDAELAV+V L G E
Sbjct: 467 EHDGVAAGVAHELHVDLVVPVAVAGGEVEGGDGAGGVAGDELHLDAELAVEVPLAGPEGA 288
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ ++ + H L R+VV
Sbjct: 287 AGLLVQDQRRHLLALRVVV 231
Score = 51.0 bits (105), Expect(2) = 4e-038
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -3 / -1
Query: 269 AAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
A P+CW R S TCWP + RT+PSVVN SH+
Sbjct: 292 APPDCWFRISDVTCWPSAL*SARTLPSVVNFSYSHE 185
Score = 50.6 bits (104), Expect(2) = 8e-060
Identities = 23/61 (37%), Positives = 26/61 (42%)
Frame = +1 / +3
Query: 88 MAPRXXXXXXXXXXXXXXXXXXXXXXWLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
MA R WL +FTTDG VR Y+ GQQV L L+Q SG
Sbjct: 111 MARRAVSVAVVALALLAAATAASADSWLYEKFTTDGNVRADYNAEGQQVTSLILNQQSGG 290
Query: 268 A 270
A
Sbjct: 291 A 293
Score = 38.6 bits (78), Expect(2) = 1e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 507 APSCRRRWPTRW 472
>gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 201 bits (433), Expect(2) = 2e-058
Identities = 81/117 (69%), Positives = 91/117 (77%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNS +YL+GEFSVEMKL+ GNSAGTV+ FYL+SG+GD DEIDMEFMGNSSG P
Sbjct: 211 SSGAGFNSTRKYLFGEFSVEMKLVAGNSAGTVTSFYLTSGEGDEHDEIDMEFMGNSSGSP 390
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VLNTNVWASGDGKKEHQF LWFDP+AD+H Y I N NI+ D+ KRYA
Sbjct: 391 TVLNTNVWASGDGKKEHQFYLWFDPAADFHRYKITXNDKNIIFQVDDVTVRVFKRYA 561
Score = 127 bits (271), Expect(2) = 5e-036
Identities = 62/114 (54%), Positives = 69/114 (60%)
Frame = -3 / -3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL S M + Q+++ +W SA GSN R NWCSFLPSPLAHTLV ST G P
Sbjct: 560 A*RLKTRTVTSSTWKMMFLSXQVILYLWKSAAGSNHR*NWCSFLPSPLAHTLVLSTVGDP 381
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
LEL P+ R*K TVPAE P SFISTLNSP RY +ELKPA
Sbjct: 380 LELPMNSMSISSCSSPSPDVR*KEVTVPAELPATSFISTLNSPKRYLRVELKPA 219
Score = 97.3 bits (206), Expect(3) = 4e-027
Identities = 45/79 (56%), Positives = 54/79 (68%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H R PA VAHELHVDLV VA+AGR+VE D AGGV DELHLDAELA +VL GVEA
Sbjct: 399 EHRRRPAGVAHELHVDLVVLVALAGRQVEGGDSAGGVAGDELHLDAELAEEVLAGGVEAS 220
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ ++ + H +VV
Sbjct: 219 ARTLVEDERRHLPARAVVV 163
Score = 46.0 bits (94), Expect(2) = 2e-058
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 181 FTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
FTTDG VR YD SG+QV L LDQ SGA
Sbjct: 136 FTTDGDVRKDYDGSGRQVASLVLDQSSGA 222
Score = 45.1 bits (92), Expect(2) = 5e-036
Identities = 29/65 (44%), Positives = 32/65 (49%)
Frame = -2 / -2
Query: 291 LLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREGGDGEH 112
+L G SA LVE E HL AR VV AD AVRGE R G E E GD E
Sbjct: 246 VLAGGVEASARTLVEDERRHLPARAVVVFADVAVRGELVEPELRGGGPDDDEAEDGDRER 67
Query: 111 CQQRT 97
+R+
Sbjct: 66 QSRRS 52
Score = 38.6 bits (78), Expect(3) = 4e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 439 APSCRRRWPTRW 404
Score = 24.0 bits (46), Expect(3) = 4e-027
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 205 CGRCRPW*T 179
CGR RPW*T
Sbjct: 160 CGRRRPW*T 134
>gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 187 bits (402), Expect(2) = 4e-058
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 267 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 446
Query: 439 VVLNTNVWASGDGKKEHQFDLW 504
VVLNTNVWA+GDGKKEHQFDLW
Sbjct: 447 VVLNTNVWANGDGKKEHQFDLW 512
Score = 123 bits (264), Expect(2) = 8e-037
Identities = 55/78 (70%), Positives = 56/78 (71%)
Frame = -3 / -3
Query: 500 RSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSF 321
RSNWCSFLPSPLAHT V STTGCP+ L PEER*K ETVPAE P MSF
Sbjct: 508 RSNWCSFLPSPLAHTFVLSTTGCPVALPMNSMSISSCPSPSPEER*KQETVPAELPGMSF 329
Query: 320 ISTLNSP*RYCSLELKPA 267
I TLN P*RYCSLELKPA
Sbjct: 328 IWTLNWP*RYCSLELKPA 275
Score = 118 bits (252), Expect(3) = 3e-032
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 455 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 276
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 275 AGAAVEVEHRHLRAGLVVV 219
Score = 79.4 bits (167), Expect(3) = 2e-023
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T L ATATG TRSTWSSWAT GSRWC T TCGP ATARR
Sbjct: 373 TFLLATATGMTRSTWSSWATPRGSRWCSTQTCGPTATARR 492
Score = 59.3 bits (123), Expect(2) = 4e-058
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 177 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 278
Score = 51.0 bits (105), Expect(2) = 8e-037
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -2
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 275 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 138
Score = 35.0 bits (70), Expect(3) = 2e-023
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHP 332
GAVPLR VQR DEAHP
Sbjct: 293 GAVPLRPVQRPDEAHP 340
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 495 APSCRRRWPTR 463
Score = 33.1 bits (66), Expect(3) = 2e-023
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T S RTAPSA TT A RW C
Sbjct: 178 GSTRSSARTAPSAPTTTSPARRWRC 252
Score = 25.4 bits (49), Expect(3) = 3e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 216 CGRCRPC*TS 187
>gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203h22, DNA
sequence
Length = 431
Score = 124 bits (265), Expect(3) = 2e-052
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = -3 / -1
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYP 207
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE S+P
Sbjct: 170 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSFP 12
Score = 122 bits (260), Expect(2) = 5e-057
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +1 / +1
Query: 208 GYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLS 372
G D SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSAGTVSCFY+S
Sbjct: 13 GNDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSAGTVSCFYVS 177
Score = 120 bits (257), Expect(2) = 5e-057
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +1 / +3
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDP 513
LSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP
Sbjct: 285 LSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDP 431
Score = 103 bits (220), Expect(2) = 8e-027
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = -2 / -3
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVV 211
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VV
Sbjct: 171 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVV 16
Score = 82.6 bits (174), Expect(3) = 6e-023
Identities = 32/38 (84%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 371 LPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
LPATATG TRSTWSSWAT SRWC TPTCGP ATARR
Sbjct: 289 LPATATGTTRSTWSSWATPPVSRWCSTPTCGPTATARR 402
Score = 66.6 bits (139), Expect(3) = 2e-052
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3 / -2
Query: 512 GSNQRSNWCSFLPSPLAHTLVFSTTGCPLEL 420
GSN RSNWCSFLPSPLAHTLV STTG P+ L
Sbjct: 430 GSNHRSNWCSFLPSPLAHTLVLSTTG*PVAL 338
Score = 54.7 bits (113), Expect(3) = 2e-052
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVE 361
+HHRL VAHELHVDLV PVAVAGR+++
Sbjct: 365 EHHRLTGGVAHELHVDLVVPVAVAGRKLQ 279
Score = 40.5 bits (82), Expect(3) = 6e-023
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 90 GAVPLRRVQHRDEAHPRE 143
Score = 38.6 bits (78), Expect(2) = 8e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 405 APSCRRRWPTRW 370
Score = 23.5 bits (45), Expect(3) = 6e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 212 TTIRASRW*C 241
TT+ ASRW*C
Sbjct: 17 TTVPASRW*C 46
>gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 424
Score = 214 bits (462), Expect(2) = 2e-055
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 126 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 305
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNV 459
GT SCFYLSSGDGDG DEIDMEFMGN++GQPVVLNTNV
Sbjct: 306 GTGSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNV 419
Score = 172 bits (371), Expect(3) = 2e-046
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRL VAHELHVDLV PVAVAGR+VEA GAGGVP DELHLDAELAV+VLLLGVEAG
Sbjct: 407 EHHRLTGGVAHELHVDLVVPVAVAGRKVEA*AGAGGVPADELHLDAELAVEVLLLGVEAG 228
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AGVLVEAEHHHLLA VVS ADGAVRGE KP
Sbjct: 227 GAGVLVEAEHHHLLAGTVVSLADGAVRGELGAKP 126
Score = 170 bits (365), Expect(2) = 8e-043
Identities = 75/101 (74%), Positives = 76/101 (75%)
Frame = -3 / -1
Query: 464 AHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCS 285
AHTLV STTG P+ L PEER*KHE VPAEFPRMSFIS LNSP*RYCS
Sbjct: 424 AHTLVLSTTG*PVALPMNSMSISSCPSPSPEER*KHEPVPAEFPRMSFISMLNSP*RYCS 245
Query: 284 LELKPAAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
LELKPAAPECWSR SITTCWPE SYP RTVPSVVNL S D
Sbjct: 244 LELKPAAPECWSRLSITTCWPELSYPSRTVPSVVNLAPSQD 122
Score = 67.5 bits (141), Expect(3) = 1e-026
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTC 460
T LPATATG TRSTWSSWAT SRWC TPTC
Sbjct: 325 TFLPATATGTTRSTWSSWATPPVSRWCSTPTC 420
Score = 50.6 bits (104), Expect(3) = 1e-026
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 127 GLAPSSPRTAPSARDTTVPASRW*C 201
Score = 40.5 bits (82), Expect(3) = 1e-026
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 245 GAVPLRRVQHRDEAHPRE 298
Score = 28.6 bits (56), Expect(3) = 2e-046
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 72 ENAVPWCGCCSIEEL 28
Score = 24.9 bits (48), Expect(2) = 8e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 74 QRTRCHGVAAAL 39
Score = 24.0 bits (46), Expect(3) = 2e-046
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 122 LRRGGLQEREG 90
Score = 23.1 bits (44), Expect(2) = 2e-055
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +1
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 52 TPWHRVL 72
>gb|CD428137.1|CD428137 ETH1_32_H05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_H05_A002 5', mRNA sequence
Length = 772
Score = 133 bits (286), Expect(3) = 5e-055
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXT 555
DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN T
Sbjct: 543 DEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPT 704
Score = 95.0 bits (201), Expect(3) = 1e-036
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -1
Query: 557 LVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLEL 420
+V FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP+ L
Sbjct: 706 VVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCPVAL 569
Score = 78.5 bits (165), Expect(3) = 5e-055
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYL 369
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFY+
Sbjct: 161 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYV 271
Score = 62.9 bits (131), Expect(3) = 1e-036
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = -3 / -2
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
*K ETVPAE P MSFI TLN P*RYCSLELKPA
Sbjct: 267 *KQETVPAELPGMSFIWTLNWP*RYCSLELKPA 169
Score = 44.6 bits (91), Expect(3) = 5e-055
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 193 GTVRTGYDDSGQQVVMLRLDQHSGA 267
GTVRT YD+SG QV ML LD+ SGA
Sbjct: 98 GTVRTNYDESGAQVAMLNLDRSSGA 172
Score = 36.8 bits (74), Expect(3) = 1e-036
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / -2
Query: 266 APECWSRRSITTCWPESSYPVRTVPS 189
APE SR SI TC P+SS VRTVP+
Sbjct: 171 APELRSRLSIATCAPDSS*LVRTVPA 94
>gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 211 bits (456), Expect = 6e-054
Identities = 81/107 (75%), Positives = 92/107 (85%)
Frame = +1 / +2
Query: 286 EQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWA 465
++YLYGEFS++MKLI GNSAGTV+ FYL+SGDGDG DEIDMEFMGNSSG PVVLNTNVWA
Sbjct: 11 QRYLYGEFSIQMKLIPGNSAGTVTSFYLTSGDGDGHDEIDMEFMGNSSGDPVVLNTNVWA 190
Query: 466 SGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
+GDGKKEHQF LWFDP+AD+HTYTIIWN N++ DLF KRY
Sbjct: 191 NGDGKKEHQFYLWFDPAADFHTYTIIWNDKNVIFKVDDLFIRSFKRY 331
Score = 136 bits (292), Expect = 3e-031
Identities = 67/105 (63%), Positives = 68/105 (64%)
Frame = -3 / -1
Query: 605 *RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPL 426
*RL MKRS + FQMMV*VW SA GSNQR NWCSFLPSPLAHTLV STTG PL
Sbjct: 330 *RLKLRMKRSSTLKMTFLSFQMMV*VWKSAAGSNQR*NWCSFLPSPLAHTLVLSTTGSPL 151
Query: 425 ELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RY 291
EL PE R*K TVPAE P MSFI LNSP*RY
Sbjct: 150 ELPMNSMSISSCPSPSPEVR*KEVTVPAELPGMSFIWMLNSP*RY 16
Score = 89.0 bits (188), Expect(2) = 9e-023
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLL 286
+H + A VAHELHVDLV PVAVAG EVE DGAGGV DELHLDAELAV+V L
Sbjct: 172 EHDGVAAGVAHELHVDLVVPVAVAGGEVEGGDGAGGVAGDELHLDAELAVEVPL 11
Score = 38.6 bits (78), Expect(2) = 9e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 212 APSCRRRWPTRW 177
>gb|CW292511.1|CW292511 104_772_11414127_148_35581_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414127, DNA
sequence
Length = 606
Score = 151 bits (325), Expect(3) = 2e-050
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +1 / -2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 398 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 219
Query: 346 GTVSCFYLS 372
GTVSCFY+S
Sbjct: 218 GTVSCFYVS 192
Score = 148 bits (318), Expect(4) = 4e-050
Identities = 61/68 (89%), Positives = 61/68 (89%)
Frame = -3 / +1
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSV 186
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSV
Sbjct: 199 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSV 378
Query: 185 VNLLSSHD 162
VNL S D
Sbjct: 379 VNLAPSQD 402
Score = 126 bits (269), Expect(2) = 1e-029
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = -2 / +3
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVR 187
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VVS ADGAVR
Sbjct: 198 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVVSLADGAVR 377
Query: 186 GEPPVKP 166
GE KP
Sbjct: 378 GELGAKP 398
Score = 64.3 bits (134), Expect(3) = 2e-050
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1 / -1
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
LSSGDGDG DEIDMEFMGN++GQPVVLN
Sbjct: 84 LSSGDGDGHDEIDMEFMGNATGQPVVLN 1
Score = 56.1 bits (116), Expect(3) = 8e-023
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +2 / -2
Query: 371 LPATATGATRSTWSSWATRAGSRWC 445
LPATATG TRSTWSSWAT SRWC
Sbjct: 80 LPATATGTTRSTWSSWATPPVSRWC 6
Score = 54.7 bits (113), Expect(4) = 4e-050
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / +1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVE 361
+HHRL VAHELHVDLV PVAVAGR+++
Sbjct: 4 EHHRLTGGVAHELHVDLVVPVAVAGRKLQ 90
Score = 50.6 bits (104), Expect(3) = 8e-023
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / -3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 397 GLAPSSPRTAPSARDTTVPASRW*C 323
Score = 40.5 bits (82), Expect(3) = 8e-023
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / -1
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 279 GAVPLRRVQHRDEAHPRE 226
Score = 28.6 bits (56), Expect(4) = 4e-050
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / +2
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 452 ENAVPWCGCCSIEEL 496
Score = 24.9 bits (48), Expect(2) = 1e-029
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / +3
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 450 QRTRCHGVAAAL 485
Score = 24.0 bits (46), Expect(4) = 4e-050
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 402 LRRGGLQEREG 434
Score = 23.1 bits (44), Expect(3) = 2e-050
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / -3
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 472 TPWHRVL 452
>gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_H09_A002 5', mRNA sequence
Length = 363
Score = 194 bits (418), Expect(2) = 1e-049
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 99 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 278
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSS 429
GTVSCFYLSSGDGDG DEIDMEFMGN++
Sbjct: 279 GTVSCFYLSSGDGDGHDEIDMEFMGNAT 362
Score = 165 bits (355), Expect(3) = 2e-044
Identities = 74/86 (86%), Positives = 76/86 (88%)
Frame = -2 / -2
Query: 423 VAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEA 244
VAHELHVDLV PVAVAGR+VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEA
Sbjct: 356 VAHELHVDLVVPVAVAGRKVEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEA 177
Query: 243 EHHHLLARIVVSRADGAVRGEPPVKP 166
EHHHLLA VVS ADGAVRGE KP
Sbjct: 176 EHHHLLAGTVVSLADGAVRGELGAKP 99
Score = 155 bits (333), Expect(2) = 1e-038
Identities = 64/71 (90%), Positives = 64/71 (90%)
Frame = -3 / -3
Query: 374 EER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTV 195
EER*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTV
Sbjct: 307 EER*KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTV 128
Query: 194 PSVVNLLSSHD 162
PSVVNL S D
Sbjct: 127 PSVVNLAPSQD 95
Score = 50.6 bits (104), Expect(4) = 7e-022
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
GL SPRTAPSARDTT+ ASRW*C
Sbjct: 100 GLAPSSPRTAPSARDTTVPASRW*C 174
Score = 46.9 bits (96), Expect(4) = 7e-022
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWAT 424
T LPATATG TRSTWSSWAT
Sbjct: 298 TFLPATATGTTRSTWSSWAT 357
Score = 40.5 bits (82), Expect(4) = 7e-022
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 285 GAVPLRRVQRRDEAHPGE 338
GAVPLRRVQ RDEAHP E
Sbjct: 218 GAVPLRRVQHRDEAHPRE 271
Score = 28.6 bits (56), Expect(3) = 2e-044
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 45 ENAVPWCGCCSIEEL 1
Score = 24.9 bits (48), Expect(2) = 1e-038
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 47 QRTRCHGVAAAL 12
Score = 24.0 bits (46), Expect(3) = 2e-044
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 95 LRRGGLQEREG 63
Score = 23.1 bits (44), Expect(2) = 1e-049
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +1
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 25 TPWHRVL 45
Score = 18.9 bits (35), Expect(4) = 7e-022
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +1 / +3
Query: 79 THTMAPR 99
+HTMAPR
Sbjct: 21 SHTMAPR 41
>gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 166 bits (356), Expect(2) = 3e-049
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +1 / -2
Query: 274 FNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNT 453
F S+++YLYGEFS++MKLI GNSAGTV+ FYL+SGDGDG DEIDMEFMGNSSG PVVLNT
Sbjct: 235 FRSRQRYLYGEFSIQMKLIPGNSAGTVTSFYLTSGDGDGHDEIDMEFMGNSSGDPVVLNT 56
Query: 454 NVWASGDGKKEHQFDLWF 507
NVWA+GDGKKEHQF LWF
Sbjct: 55 NVWANGDGKKEHQFYLWF 2
Score = 103 bits (220), Expect(2) = 8e-031
Identities = 50/78 (64%), Positives = 51/78 (65%)
Frame = -3 / +3
Query: 506 NQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRM 327
NQR NWCSFLPSPLAHTLV STTG PLEL PE R*K TVPAE P M
Sbjct: 3 NQR*NWCSFLPSPLAHTLVLSTTGSPLELPMNSMSISSCPSPSPEVR*KEVTVPAELPGM 182
Query: 326 SFISTLNSP*RYCSLELK 273
SFI LNSP*RY +LK
Sbjct: 183 SFIWMLNSP*RYLWRDLK 236
Score = 102 bits (217), Expect(2) = 1e-026
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = -2 / +2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H + A VAHELHVDLV PVAVAG EVE DGAGGV DELHLDAELAV+V L G E
Sbjct: 62 EHDGVAAGVAHELHVDLVVPVAVAGGEVEGGDGAGGVAGDELHLDAELAVEVPLAGPEGA 241
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ ++ + H L R+VV
Sbjct: 242 AGLLVQDQRRHLLALRVVV 298
Score = 51.0 bits (105), Expect(2) = 8e-031
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -3 / +3
Query: 269 AAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
A P+CW R S TCWP + RT+PSVVN SH+
Sbjct: 237 APPDCWFRISDVTCWPSAL*SARTLPSVVNFSYSHE 344
Score = 50.6 bits (104), Expect(2) = 3e-049
Identities = 23/61 (37%), Positives = 26/61 (42%)
Frame = +1 / -2
Query: 88 MAPRXXXXXXXXXXXXXXXXXXXXXXWLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
MA R WL +FTTDG VR Y+ GQQV L L+Q SG
Sbjct: 418 MARRAVSVAVVALALLAAATAASADSWLYEKFTTDGNVRADYNAEGQQVTSLILNQQSGG 239
Query: 268 A 270
A
Sbjct: 238 A 236
Score = 38.6 bits (78), Expect(2) = 1e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 22 APSCRRRWPTRW 57
>gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 482
Score = 153 bits (329), Expect(2) = 4e-048
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S AGFNSKEQYLYG+FSV+MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGN++GQP
Sbjct: 271 SSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQP 450
Query: 439 VVLNTNVWAS 468
VVLNTNVWA+
Sbjct: 451 VVLNTNVWAN 480
Score = 118 bits (252), Expect(2) = 2e-027
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV PVAVA R+VEA DGAGGV DELHLDAELAV+VLLLGVEAG
Sbjct: 459 EHHRLPRGVAHELHVDLVMPVAVARRKVEAGDGAGGVAGDELHLDAELAVEVLLLGVEAG 280
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ + H +VV
Sbjct: 279 AGAAVEVEHRHLRAGLVVV 223
Score = 96.4 bits (204), Expect(2) = 1e-028
Identities = 45/68 (66%), Positives = 46/68 (67%)
Frame = -3 / -1
Query: 470 PLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RY 291
PLAHT V STTGCP+ L PEER*K ETVPAE P MSFI TLN P*RY
Sbjct: 482 PLAHTFVLSTTGCPVALPMNSMSISSCPSPSPEER*KQETVPAELPGMSFIWTLNWP*RY 303
Query: 290 CSLELKPA 267
CSLELKPA
Sbjct: 302 CSLELKPA 279
Score = 59.3 bits (123), Expect(2) = 4e-048
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WL +F+TDGTVRT YD+SG QV ML LD+ SGA
Sbjct: 181 WLYEKFSTDGTVRTNYDESGAQVAMLNLDRSSGA 282
Score = 51.0 bits (105), Expect(2) = 1e-028
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 264 AGVLVEAEHHHLLARIVVSRADGAVRGEPPVKPRRLGRGGVQEREG 127
AG VE EH HL A +VV ADGAVR E V+PR R G EG
Sbjct: 279 AGAAVEVEHRHLRAGLVVVGADGAVRAELLVEPRVRRRDGRHHHEG 142
Score = 25.4 bits (49), Expect(2) = 2e-027
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 205 CGRCRPW*TS 176
CGRCRP *TS
Sbjct: 220 CGRCRPC*TS 191
>gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 655
Score = 166 bits (357), Expect(2) = 4e-043
Identities = 65/81 (80%), Positives = 69/81 (85%)
Frame = +1 / +2
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
LSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIW
Sbjct: 200 LSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIW 379
Query: 547 NXTNILXXXXDLFXXXXKRYA 609
N TNIL D KRYA
Sbjct: 380 NPTNILFKVDDNVIRVFKRYA 442
Score = 106 bits (226), Expect(3) = 6e-033
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = -3 / -2
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 441 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 262
Query: 428 LEL 420
+ L
Sbjct: 261 VAL 253
Score = 52.8 bits (109), Expect(3) = 6e-033
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREV 364
+HHRLP VAHELHVDLV PVAVA R++
Sbjct: 280 EHHRLPRGVAHELHVDLVMPVAVARRKL 197
Score = 31.3 bits (62), Expect(2) = 4e-043
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +2
Query: 334 GNSAGTVSCFYL 369
GNSAGTVSCFY+
Sbjct: 5 GNSAGTVSCFYV 40
Score = 22.6 bits (43), Expect(3) = 6e-033
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 366 VEARDGAGGV 337
VEA DGAGGV
Sbjct: 37 VEAGDGAGGV 8
>gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 670
Score = 171 bits (367), Expect = 1e-041
Identities = 66/81 (81%), Positives = 71/81 (87%)
Frame = +1 / +2
Query: 367 LSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
LSSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIW
Sbjct: 23 LSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIW 202
Query: 547 NXTNILXXXXDLFXXXXKRYA 609
N TNIL +LF KRYA
Sbjct: 203 NPTNILFKVDNLFIRSFKRYA 265
Score = 105 bits (223), Expect(2) = 3e-032
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -3 / -2
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL MKR RM V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P
Sbjct: 264 A*RLKDRMKRLSTLNRMFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*P 85
Query: 428 LEL 420
+ L
Sbjct: 84 VAL 76
Score = 54.7 bits (113), Expect(2) = 3e-032
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVE 361
+HHRL VAHELHVDLV PVAVAGR+++
Sbjct: 103 EHHRLTGGVAHELHVDLVVPVAVAGRKLQ 17
>gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191g19, DNA
sequence
Length = 624
Score = 169 bits (363), Expect = 4e-041
Identities = 65/80 (81%), Positives = 70/80 (87%)
Frame = +1 / +1
Query: 370 SSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 549
SSGDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN
Sbjct: 4 SSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWN 183
Query: 550 XTNILXXXXDLFXXXXKRYA 609
TNIL +LF KRYA
Sbjct: 184 PTNILFKVDNLFIRSFKRYA 243
Score = 105 bits (223), Expect(2) = 9e-032
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -3 / -2
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL MKR RM V FQMMV*VW*SA GSN RSNWCSFLPSPLAHTLV STTG P
Sbjct: 242 A*RLKDRMKRLSTLNRMFVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTLVLSTTG*P 63
Query: 428 LEL 420
+ L
Sbjct: 62 VAL 54
Score = 52.8 bits (109), Expect(2) = 9e-032
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGR 370
+HHRL VAHELHVDLV PVAVAGR
Sbjct: 81 EHHRLTGGVAHELHVDLVVPVAVAGR 4
>gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 136 bits (292), Expect(2) = 6e-040
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1 / +3
Query: 274 FNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNT 453
F S+++YLYGEFS++MKLI GNSAGTV+ FYL+SGDGDG DEIDMEFMGNSSG PVVLNT
Sbjct: 303 FRSRQRYLYGEFSIQMKLIPGNSAGTVTSFYLTSGDGDGHDEIDMEFMGNSSGDPVVLNT 482
Query: 454 NVWASG 471
NVWA+G
Sbjct: 483 NVWANG 500
Score = 102 bits (217), Expect(2) = 9e-023
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+H + A VAHELHVDLV PVAVAG EVE DGAGGV DELHLDAELAV+V L G E
Sbjct: 476 EHDGVAAGVAHELHVDLVVPVAVAGGEVEGGDGAGGVAGDELHLDAELAVEVPLAGPEGA 297
Query: 267 SAGVLVEAEHHHLLARIVV 211
+ ++ + H L R+VV
Sbjct: 296 AGLLVQDQRRHLLALRVVV 240
Score = 74.8 bits (157), Expect(2) = 3e-022
Identities = 39/66 (59%), Positives = 40/66 (60%)
Frame = -3 / -3
Query: 470 PLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RY 291
PLAHTLV STTG PLEL PE R*K TVPAE P MSFI LNSP*RY
Sbjct: 499 PLAHTLVLSTTGSPLELPMNSMSISSCPSPSPEVR*KEVTVPAELPGMSFIWMLNSP*RY 320
Query: 290 CSLELK 273
+LK
Sbjct: 319 LWRDLK 302
Score = 51.0 bits (105), Expect(2) = 3e-022
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -3 / -3
Query: 269 AAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
A P+CW R S TCWP + RT+PSVVN SH+
Sbjct: 301 APPDCWFRISDVTCWPSAL*SARTLPSVVNFSYSHE 194
Score = 48.7 bits (100), Expect(2) = 6e-040
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAA 270
WL +FTTDG VR Y+ GQQV L L+Q SG A
Sbjct: 198 WLYEKFTTDGNVRADYNAEGQQVTSLILNQQSGGA 302
Score = 25.4 bits (49), Expect(2) = 9e-023
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -1
Query: 472 RRWPTRW 452
RRWPTRW
Sbjct: 501 RRWPTRW 481
>gb|CW292510.1|CW292510 104_772_11414127_116_35577_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414127, DNA
sequence
Length = 732
Score = 151 bits (325), Expect(2) = 8e-037
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 439 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 618
Query: 346 GTVSCFYLS 372
GTVSCFY+S
Sbjct: 619 GTVSCFYVS 645
Score = 148 bits (318), Expect(3) = 3e-039
Identities = 61/68 (89%), Positives = 61/68 (89%)
Frame = -3 / -2
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSV 186
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSV
Sbjct: 638 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSV 459
Query: 185 VNLLSSHD 162
VNL S D
Sbjct: 458 VNLAPSQD 435
Score = 126 bits (269), Expect(2) = 1e-029
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = -2 / -1
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVR 187
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VVS ADGAVR
Sbjct: 639 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVVSLADGAVR 460
Query: 186 GEPPVKP 166
GE KP
Sbjct: 459 GELGAKP 439
Score = 28.6 bits (56), Expect(3) = 3e-039
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 385 ENAVPWCGCCSIEEL 341
Score = 24.9 bits (48), Expect(2) = 1e-029
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 387 QRTRCHGVAAAL 352
Score = 24.0 bits (46), Expect(3) = 3e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 435 LRRGGLQEREG 403
Score = 23.1 bits (44), Expect(2) = 8e-037
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +2
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 365 TPWHRVL 385
>gb|CW130175.1|CW130175 104_512_11114967_148_34774_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114967, DNA
sequence
Length = 690
Score = 151 bits (325), Expect(2) = 8e-037
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 367 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 546
Query: 346 GTVSCFYLS 372
GTVSCFY+S
Sbjct: 547 GTVSCFYVS 573
Score = 148 bits (318), Expect(3) = 3e-039
Identities = 61/68 (89%), Positives = 61/68 (89%)
Frame = -3 / -2
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSV 186
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSV
Sbjct: 566 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSV 387
Query: 185 VNLLSSHD 162
VNL S D
Sbjct: 386 VNLAPSQD 363
Score = 126 bits (269), Expect(2) = 1e-029
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = -2 / -1
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVR 187
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VVS ADGAVR
Sbjct: 567 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVVSLADGAVR 388
Query: 186 GEPPVKP 166
GE KP
Sbjct: 387 GELGAKP 367
Score = 28.6 bits (56), Expect(3) = 3e-039
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 313 ENAVPWCGCCSIEEL 269
Score = 24.9 bits (48), Expect(2) = 1e-029
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 315 QRTRCHGVAAAL 280
Score = 24.0 bits (46), Expect(3) = 3e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 363 LRRGGLQEREG 331
Score = 23.1 bits (44), Expect(2) = 8e-037
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +2
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 293 TPWHRVL 313
>gb|CW063399.1|CW063399 104_309_10521981_115_30140 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521981, DNA
sequence
Length = 604
Score = 151 bits (325), Expect(2) = 8e-037
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WL +FTTDGTVR GYD SGQQVVML LDQHSGAAGFNSKEQYLYGEFS+EMKLIRGNSA
Sbjct: 287 WLGAKFTTDGTVREGYDSSGQQVVMLSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSA 466
Query: 346 GTVSCFYLS 372
GTVSCFY+S
Sbjct: 467 GTVSCFYVS 493
Score = 148 bits (318), Expect(3) = 3e-039
Identities = 61/68 (89%), Positives = 61/68 (89%)
Frame = -3 / -2
Query: 365 *KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVPSV 186
*KHETVPAEFPRMSFIS LNSP*RYCSLELKPAAPECWSR SITTCWPE SYP RTVPSV
Sbjct: 486 *KHETVPAEFPRMSFISMLNSP*RYCSLELKPAAPECWSRLSITTCWPELSYPSRTVPSV 307
Query: 185 VNLLSSHD 162
VNL S D
Sbjct: 306 VNLAPSQD 283
Score = 126 bits (269), Expect(2) = 1e-029
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = -2 / -1
Query: 366 VEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRADGAVR 187
VEA DGAGGVP DELHLDAELAV+VLLLGVEAG AGVLVEAEHHHLLA VVS ADGAVR
Sbjct: 487 VEA*DGAGGVPADELHLDAELAVEVLLLGVEAGGAGVLVEAEHHHLLAGTVVSLADGAVR 308
Query: 186 GEPPVKP 166
GE KP
Sbjct: 307 GELGAKP 287
Score = 28.6 bits (56), Expect(3) = 3e-039
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 103 ENAVPWCVCVCVSAL 59
ENAVPWC C + L
Sbjct: 233 ENAVPWCGCCSIEEL 189
Score = 24.9 bits (48), Expect(2) = 1e-029
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 105 QRTRCHGVCVCV 70
QRTRCHGV +
Sbjct: 235 QRTRCHGVAAAL 200
Score = 24.0 bits (46), Expect(3) = 3e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 159 LGRGGVQEREG 127
L RGG+QEREG
Sbjct: 283 LRRGGLQEREG 251
Score = 23.1 bits (44), Expect(2) = 8e-037
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 83 TPWHRVL 103
TPWHRVL
Sbjct: 213 TPWHRVL 233
>gb|CF427844.1|CF427844 PH1_11_F08.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_F08_A002 3', mRNA sequence
Length = 634
Score = 160 bits (345), Expect = 1e-038
Identities = 62/78 (79%), Positives = 66/78 (84%)
Frame = +1 / -1
Query: 376 GDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXT 555
GDGDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN T
Sbjct: 268 GDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPT 89
Query: 556 NILXXXXDLFXXXXKRYA 609
NIL D KRYA
Sbjct: 88 NILFKVDDNVIRVFKRYA 35
Score = 106 bits (226), Expect(2) = 2e-031
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = -3 / +3
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 36 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 215
Query: 428 LEL 420
+ L
Sbjct: 216 VAL 224
Score = 50.6 bits (104), Expect(2) = 2e-031
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -2 / +2
Query: 447 QHHRLPARVAHELHVDLVAPVAVA 376
+HHRLP VAHELHVDLV PVAVA
Sbjct: 197 EHHRLPRGVAHELHVDLVMPVAVA 268
>gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 623
Score = 155 bits (333), Expect = 6e-037
Identities = 60/76 (78%), Positives = 64/76 (84%)
Frame = +1 / -1
Query: 382 GDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNI 561
GDG DEIDMEFMGN++GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN TNI
Sbjct: 623 GDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNPTNI 444
Query: 562 LXXXXDLFXXXXKRYA 609
L D KRYA
Sbjct: 443 LFKVDDNVIRVFKRYA 396
Score = 106 bits (226), Expect = 3e-022
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = -3 / +1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*RL + S RMLV FQMMV*VW*SA GSN RSNWCSFLPSPLAHT V STTGCP
Sbjct: 397 A*RLKTRITLSSTLKRMLVGFQMMV*VW*SAAGSNHRSNWCSFLPSPLAHTFVLSTTGCP 576
Query: 428 LEL 420
+ L
Sbjct: 577 VAL 585
>gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_D07_A002 5', mRNA sequence
Length = 770
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 389 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 568
Query: 553 TNIL 564
++I+
Sbjct: 569 SHIV 580
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 278 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 394
>gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_60_G11_A012 5', mRNA sequence
Length = 726
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 395 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 574
Query: 553 TNIL 564
++I+
Sbjct: 575 SHIV 586
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 284 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 400
>gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_12_B12_A002 5', mRNA sequence
Length = 711
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 398 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 577
Query: 553 TNIL 564
++I+
Sbjct: 578 SHIV 589
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 287 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 403
>gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_20_F09_A012 5', mRNA sequence
Length = 695
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 401 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 580
Query: 553 TNIL 564
++I+
Sbjct: 581 SHIV 592
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 290 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 406
>gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_A06_A002 5', mRNA sequence
Length = 697
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +3
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 369 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 548
Query: 553 TNIL 564
++I+
Sbjct: 549 SHIV 560
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 258 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 374
>gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_F11_A012 5', mRNA sequence
Length = 690
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 395 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 574
Query: 553 TNIL 564
++I+
Sbjct: 575 SHIV 586
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 284 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 400
>gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 656
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 32/64 (50%), Positives = 49/64 (76%)
Frame = +1 / +3
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SG+P ++TNV++ G G +E QF +WFDP+AD+H Y+++WN
Sbjct: 291 SSQGSAHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTADFHAYSVLWNP 470
Query: 553 TNIL 564
++I+
Sbjct: 471 SHIV 482
Score = 65.2 bits (136), Expect(2) = 2e-033
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
S +GF SK QYLYG F +++KL+ GNSAGTV+ FYLSS
Sbjct: 180 SSGSGFQSKSQYLYGRFDMQLKLVPGNSAGTVTTFYLSS 296
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 562,327,251
Number of Sequences: 832831
Number of extensions: 7144921
Number of successful extensions: 180889
Number of sequences better than 1.0e-020: 127
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17827330437
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)