TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAR2a06.yg.3.1
(612 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW394889.1|CW394889 fsbb001f082l05k0 Sorghum methylation... 157 3e-073
gb|CW313304.1|CW313304 104_803_11471215_148_35790_024 Sorgh... 155 3e-071
gb|CW029687.1|CW029687 104_257_10499816_116_30402 Sorghum m... 155 1e-067
gb|AC152914.1| Sorghum bicolor clone SB132E20, *** SEQUENCI... 128 2e-050
gb|CW434838.1|CW434838 fsbb001f150l16k0 Sorghum methylation... 88 1e-035
gb|CW435026.1|CW435026 fsbb001f150p20k0 Sorghum methylation... 88 1e-035
gb|CW435030.1|CW435030 fsbb001f150p22k0 Sorghum methylation... 84 1e-034
gb|CW041892.1|CW041892 104_275_10506814_115_30285 Sorghum m... 94 1e-032
gb|CN142690.1|CN142690 WOUND1_11_C12.g1_A002 Wounded leaves... 124 1e-027
gb|CW489685.1|CW489685 fsbb001f274l24k0 Sorghum methylation... 120 2e-026
gb|CN144254.1|CN144254 WOUND1_21_C07.b1_A002 Wounded leaves... 116 2e-025
gb|CW482189.1|CW482189 fsbb001f242c13f0 Sorghum methylation... 90 2e-023
gb|CW428404.1|CW428404 fsbb001f141b12k0 Sorghum methylation... 71 5e-023
gb|CW365184.1|CW365184 fsbb001f037j18f0 Sorghum methylation... 101 8e-021
gb|CW426248.1|CW426248 fsbb001f137i18f0 Sorghum methylation... 88 2e-020
gb|CN148869.1|CN148869 WOUND1_59_G08.b1_A002 Wounded leaves... 100 2e-020
gb|CN149300.1|CN149300 WOUND1_61_H11.g1_A002 Wounded leaves... 67 3e-020
gb|CW262232.1|CW262232 104_729_11229943_116_35207_020 Sorgh... 84 1e-018
gb|CN144433.1|CN144433 WOUND1_22_E12.b1_A002 Wounded leaves... 93 3e-018
gb|CW329472.1|CW329472 104_826_11479863_148_35996_064 Sorgh... 77 4e-018
gb|CW073334.1|CW073334 104_334_10779333_114_31361_117 Sorgh... 79 9e-018
gb|CW082183.1|CW082183 104_423_10943238_116_32330_029 Sorgh... 79 9e-018
gb|CW073539.1|CW073539 104_336_10780244_114_31365_260 Sorgh... 90 3e-017
gb|CW440572.1|CW440572 fsbb001f159e18k0 Sorghum methylation... 89 6e-017
gb|CW350447.1|CW350447 fsbb001f011m06k0 Sorghum methylation... 89 8e-017
gb|CW440487.1|CW440487 fsbb001f159c20k0 Sorghum methylation... 88 1e-016
gb|CW350446.1|CW350446 fsbb001f011m06f0 Sorghum methylation... 87 2e-016
gb|CN148951.1|CN148951 WOUND1_59_G08.g1_A002 Wounded leaves... 53 4e-016
gb|CW203947.1|CW203947 104_631_11186282_116_37095_003 Sorgh... 85 7e-016
gb|CW476798.1|CW476798 fsbb001f233n01k0 Sorghum methylation... 85 7e-016
gb|CW426249.1|CW426249 fsbb001f137i18k0 Sorghum methylation... 85 1e-015
gb|CW038499.1|CW038499 104_270_10504959_115_30386 Sorghum m... 68 3e-015
gb|BZ333570.1|BZ333570 hx71a12.g1 WGS-SbicolorF (JM107 adap... 51 4e-015
gb|CB926745.1|CB926745 ABA1_10_F12.b1_A012 Abscisic acid-tr... 83 5e-015
gb|CW022741.1|CW022741 104_162_10432029_1_30008 Sorghum met... 82 7e-015
gb|CW073335.1|CW073335 104_334_10779333_116_31362_117 Sorgh... 82 7e-015
gb|CW130950.1|CW130950 104_513_11115399_148_34778_054 Sorgh... 82 7e-015
gb|CW288118.1|CW288118 104_766_11411781_116_35529_087 Sorgh... 82 7e-015
gb|CW037130.1|CW037130 104_268_10504162_115_30382 Sorghum m... 77 1e-014
gb|CW160136.1|CW160136 104_566_11149723_148_36427_072 Sorgh... 59 2e-014
gb|CW288119.1|CW288119 104_766_11411781_148_35533_087 Sorgh... 79 6e-014
gb|CW370505.1|CW370505 fsbb001f045h16f0 Sorghum methylation... 78 1e-013
gb|CW322613.1|CW322613 104_816_11476190_148_35951_055 Sorgh... 77 2e-013
gb|CN145119.1|CN145119 WOUND1_26_H08.g1_A002 Wounded leaves... 76 4e-013
gb|CW372025.1|CW372025 fsbb001f047l22f0 Sorghum methylation... 76 6e-013
gb|CW422122.1|CW422122 fsbb001f131e02f0 Sorghum methylation... 76 6e-013
gb|CW327174.1|CW327174 104_822_11478606_148_35965_019 Sorgh... 59 1e-012
gb|CW242855.1|CW242855 104_702_11219565_116_37563_085 Sorgh... 75 1e-012
gb|BZ422372.1|BZ422372 id52h06.b1 WGS-SbicolorF (DH5a methy... 74 1e-012
gb|BZ423750.1|BZ423750 id52h06.g1 WGS-SbicolorF (DH5a methy... 74 1e-012
gb|CW115463.1|CW115463 104_490_11106573_148_34588_085 Sorgh... 73 3e-012
gb|CW329471.1|CW329471 104_826_11479863_116_35995_064 Sorgh... 73 3e-012
gb|CW373474.1|CW373474 fsbb001f049n24k0 Sorghum methylation... 66 9e-012
gb|CW096545.1|CW096545 104_462_11001954_116_34349_075 Sorgh... 72 1e-011
gb|CN145031.1|CN145031 WOUND1_26_H08.b2_A002 Wounded leaves... 72 1e-011
gb|BM329343.1|BM329343 PIC1_36_E06.g1_A002 Pathogen-infecte... 71 1e-011
gb|CW033966.1|CW033966 104_263_10502267_114_30359 Sorghum m... 70 3e-011
gb|CW313624.1|CW313624 104_804_11471382_116_35793_031 Sorgh... 57 4e-011
gb|CL704700.2|CL704700 SP__Bb0027A10.f SP__Bb Sorghum propi... 69 5e-011
gb|CW280779.1|CW280779 104_756_11407812_116_35452_046 Sorgh... 68 1e-010
gb|CW077774.1|CW077774 104_385_10894023_148_31913_087 Sorgh... 67 3e-010
gb|CW430767.1|CW430767 fsbb001f144k05f0 Sorghum methylation... 67 3e-010
gb|CW314315.1|CW314315 104_805_11471765_116_35877_031 Sorgh... 65 1e-009
gb|CW479008.1|CW479008 fsbb001f237d06k0 Sorghum methylation... 65 1e-009
gb|CW366624.1|CW366624 fsbb001f039l07k0 Sorghum methylation... 48 1e-009
gb|CW172785.1|CW172785 104_584_11156479_116_36545_030 Sorgh... 64 2e-009
gb|CW317467.1|CW317467 104_809_11473428_148_35866_044 Sorgh... 64 2e-009
gb|CW262233.1|CW262233 104_729_11229943_148_35203_020 Sorgh... 44 6e-009
gb|CW047378.1|CW047378 104_285_10512696_115_30217 Sorghum m... 62 1e-008
gb|CW106959.1|CW106959 104_476_11096284_148_34465_002 Sorgh... 44 2e-008
gb|BZ693882.1|BZ693882 SP__Ba0040C16.r SP__Ba Sorghum propi... 59 5e-008
gb|CW787938.1|CW787938 SP__Ba0040C16.r SP__Ba Sorghum propi... 59 7e-008
gb|CN147553.1|CN147553 WOUND1_50_B06.g1_A002 Wounded leaves... 55 1e-006
gb|CN149964.1|CN149964 WOUND1_66_B10.b1_A002 Wounded leaves... 53 3e-006
gb|CN144336.1|CN144336 WOUND1_21_C07.g1_A002 Wounded leaves... 53 4e-006
gb|CW280780.1|CW280780 104_756_11407812_148_35456_046 Sorgh... 48 1e-004
gb|CB926721.1|CB926721 ABA1_10_F10.b1_A012 Abscisic acid-tr... 47 2e-004
gb|CW077635.1|CW077635 104_383_10893365_116_31773_197 Sorgh... 34 9e-004
gb|CW313303.1|CW313303 104_803_11471215_116_35786_024 Sorgh... 45 0.001
gb|BZ421989.1|BZ421989 id48c06.b1 WGS-SbicolorF (DH5a methy... 32 0.002
gb|CW149615.1|CW149615 104_548_11142588_116_36288_036 Sorgh... 32 0.002
gb|BZ423346.1|BZ423346 id48c06.g1 WGS-SbicolorF (DH5a methy... 32 0.002
gb|CW423099.1|CW423099 fsbb001f132m01k0 Sorghum methylation... 42 0.007
gb|CW131796.1|CW131796 104_514_11115865_148_34790_001 Sorgh... 41 0.012
gb|BZ330142.1|BZ330142 hv90c08.g1 WGS-SbicolorF (JM107 adap... 40 0.024
gb|BZ330230.1|BZ330230 hv90h09.g1 WGS-SbicolorF (JM107 adap... 40 0.024
gb|BG557623.1|BG557623 EM1_54_B09.g1_A002 Embryo 1 (EM1) So... 40 0.032
gb|CW029686.1|CW029686 104_257_10499816_114_30401 Sorghum m... 40 0.044
gb|CW206982.1|CW206982 104_635_11187874_148_36966_033 Sorgh... 38 0.12
gb|CW440648.1|CW440648 fsbb001f159g11k0 Sorghum methylation... 38 0.12
gb|BZ693191.1|BZ693191 SP__Ba0031E17.f SP__Ba Sorghum propi... 37 0.30
gb|CW078217.1|CW078217 104_390_10895968_116_31930_112 Sorgh... 37 0.30
gb|CW787137.1|CW787137 SP__Ba0031E17.f SP__Ba Sorghum propi... 37 0.30
gb|CW787138.1|CW787138 SP__Ba0031E17.r SP__Ba Sorghum propi... 37 0.30
gb|BF657693.1|BF657693 OV2_20_F01.b1_A002 Ovary 2 (OV2) Sor... 37 0.30
gb|BF657702.1|BF657702 OV2_20_G01.b1_A002 Ovary 2 (OV2) Sor... 37 0.30
gb|BM324643.1|BM324643 PIC1_33_G04.b1_A002 Pathogen-infecte... 37 0.30
gb|CN124553.1|CN124553 RHOH1_5_B12.g1_A002 Acid- and alkali... 37 0.30
gb|CN138755.1|CN138755 OX1_13_E11.g1_A002 Oxidatively-stres... 37 0.30
gb|CL185041.1|CL185041 104_398_10899257_114_32368_067 Sorgh... 36 0.41
gb|CW252041.1|CW252041 104_715_11224274_148_35091_015 Sorgh... 36 0.41
gb|CW430768.1|CW430768 fsbb001f144k05k0 Sorghum methylation... 36 0.41
gb|CW039677.1|CW039677 104_272_10505634_114_30389 Sorghum m... 36 0.56
gb|CW252682.1|CW252682 104_715_11224646_148_35093_049 Sorgh... 36 0.56
gb|CW260258.1|CW260258 104_726_11228866_116_35193_033 Sorgh... 36 0.56
gb|AW287232.2|AW287232 LG1_268_C02.b1_A002 Light Grown 1 (L... 36 0.56
gb|AW671381.1|AW671381 LG1_335_G10.b1_A002 Light Grown 1 (L... 36 0.56
gb|AW671933.1|AW671933 LG1_353_E03.b1_A002 Light Grown 1 (L... 36 0.56
gb|BM324874.1|BM324874 PIC1_36_H09.b1_A002 Pathogen-infecte... 36 0.56
gb|CN150040.1|CN150040 WOUND1_66_B10.g1_A002 Wounded leaves... 35 0.77
gb|CW232712.1|CW232712 104_685_11212963_116_37488_072 Sorgh... 35 1.1
gb|CW232713.1|CW232713 104_685_11212963_148_37487_072 Sorgh... 35 1.1
gb|BF655878.1|BF655878 FM1_41_G08.b1_A003 Floral-Induced Me... 35 1.1
gb|CL175374.1|CL175374 104_381_10892409_116_31765_009 Sorgh... 35 1.5
gb|CL175375.1|CL175375 104_381_10892409_148_31764_009 Sorgh... 35 1.5
gb|CL178537.1|CL178537 104_386_10894652_148_31911_332 Sorgh... 35 1.5
gb|CW102039.1|CW102039 104_470_11011125_116_34416_093 Sorgh... 35 1.5
gb|CW133241.1|CW133241 104_516_11116653_148_34802_081 Sorgh... 35 1.5
gb|CW242588.1|CW242588 104_702_11219424_116_37566_092 Sorgh... 35 1.5
gb|CW242589.1|CW242589 104_702_11219424_148_37565_092 Sorgh... 35 1.5
gb|CW299828.1|CW299828 104_783_11463323_116_36245_048 Sorgh... 35 1.5
gb|CW342862.1|CW342862 104_844_11487109_116_36177_049 Sorgh... 35 1.5
gb|CW395433.1|CW395433 fsbb001f083h10k0 Sorghum methylation... 35 1.5
gb|CW046793.1|CW046793 104_284_10512355_114_30219 Sorghum m... 26 1.9
gb|CW073409.1|CW073409 104_335_10779603_114_31363_003 Sorgh... 34 2.0
gb|CW139092.1|CW139092 104_529_11135052_116_34905_046 Sorgh... 34 2.0
gb|CW139093.1|CW139093 104_529_11135052_148_34909_046 Sorgh... 34 2.0
gb|CW365318.1|CW365318 fsbb001f037n02k0 Sorghum methylation... 34 2.0
gb|CW370234.1|CW370234 fsbb001f045a19k0 Sorghum methylation... 34 2.0
gb|CN143324.1|CN143324 WOUND1_15_C03.g1_A002 Wounded leaves... 34 2.0
gb|CL196714.1|CL196714 104_423_10943238_114_32326_029 Sorgh... 34 2.8
gb|CF487544.1|CF487544 POL1_44_A08.g1_A002 Pollen Sorghum b... 34 2.8
gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, pu... 34 2.8
gb|CW454062.1|CW454062 fsbb001f198f10f0 Sorghum methylation... 33 3.8
gb|CW411963.1|CW411963 fsbb001f107f22f0 Sorghum methylation... 27 4.4
gb|CW315066.1|CW315066 104_806_11472161_116_35823_079 Sorgh... 33 5.2
gb|CW315067.1|CW315067 104_806_11472161_148_35827_079 Sorgh... 33 5.2
gb|BE592120.1|BE592120 LG1_224_F05.b2_A002 Light Grown 1 (L... 33 5.2
gb|BZ330297.1|BZ330297 hv91c08.b1 WGS-SbicolorF (JM107 adap... 32 7.1
gb|CC059604.1|CC059604 ii25d03.b1 WGS-SbicolorF (DH5a methy... 32 7.1
gb|CW037683.1|CW037683 104_269_10504486_114_30383 Sorghum m... 32 7.1
gb|CW042207.1|CW042207 104_276_10506989_114_30357 Sorghum m... 32 7.1
gb|CW042208.1|CW042208 104_276_10506989_114_30475 Sorghum m... 32 7.1
gb|CW058537.1|CW058537 104_301_10518790_115_30164 Sorghum m... 32 7.1
gb|CW162043.1|CW162043 104_569_11150737_148_36443_011 Sorgh... 32 7.1
gb|CW190327.1|CW190327 104_611_11174445_116_36749_081 Sorgh... 32 7.1
gb|CW196421.1|CW196421 104_620_11181158_148_36815_057 Sorgh... 32 7.1
gb|CW260073.1|CW260073 104_726_11228770_116_35193_037 Sorgh... 32 7.1
gb|CW339177.1|CW339177 104_839_11485134_148_36136_019 Sorgh... 32 7.1
gb|CW379881.1|CW379881 fsbb001f059g02f0 Sorghum methylation... 32 7.1
gb|CW379882.1|CW379882 fsbb001f059g02k0 Sorghum methylation... 32 7.1
gb|CW413437.1|CW413437 fsbb001f112j09k0 Sorghum methylation... 32 7.1
gb|BE600208.1|BE600208 PI1_80_F06.b1_A002 Pathogen induced ... 32 7.1
gb|CD427321.1|CD427321 SA1_18_H07.g1_A002 Salicylic acid-tr... 32 7.1
gb|CN144757.1|CN144757 WOUND1_24_C04.g1_A002 Wounded leaves... 32 7.1
gb|CW486179.1|CW486179 fsbb001f249e20f0 Sorghum methylation... 27 7.8
gb|CW245137.1|CW245137 104_706_11220908_116_35081_078 Sorgh... 29 8.7
gb|CL164136.1|CL164136 104_358_10807698_114_31814_066 Sorgh... 32 9.8
gb|CL164137.1|CL164137 104_358_10807698_116_31815_066 Sorgh... 32 9.8
gb|CW123075.1|CW123075 104_502_11111018_116_34690_011 Sorgh... 32 9.8
gb|CW149616.1|CW149616 104_548_11142588_148_36287_036 Sorgh... 32 9.8
gb|CW194434.1|CW194434 104_617_11180093_148_36791_021 Sorgh... 32 9.8
gb|CW222010.1|CW222010 104_657_11202152_148_37449_026 Sorgh... 32 9.8
gb|CW292545.1|CW292545 104_772_11414145_116_35579_037 Sorgh... 32 9.8
gb|CW315575.1|CW315575 104_806_11472436_148_35828_004 Sorgh... 32 9.8
gb|CW364940.1|CW364940 fsbb001f037d12k0 Sorghum methylation... 32 9.8
gb|AW672107.1|AW672107 LG1_357_G09.b1_A002 Light Grown 1 (L... 32 9.8
gb|CF489608.1|CF489608 POL1_58_C12.g1_A002 Pollen Sorghum b... 32 9.8
>gb|CW394889.1|CW394889 fsbb001f082l05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082l05, DNA
sequence
Length = 639
Score = 157 bits (337), Expect(2) = 3e-073
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPLWAHEVRSSLEIPLPKRGRIYESKYYIH 180
AH RTHGE IL++AI F++ RLE M+PY++G L A E++S+LEIPLP+R RIYE KYYI
Sbjct: 607 AHMRTHGEVILEKAILFSQRRLETMIPYMEGSLLAREIKSALEIPLPRRVRIYELKYYIS 428
Query: 181 AYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTR 288
YE T+HEKV QLAKLNSN++QLHHQ EL I+TR
Sbjct: 427 TYEKDATVHEKVWQLAKLNSNIMQLHHQHELGIITR 320
Score = 139 bits (298), Expect(2) = 3e-073
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ I S+LPFARDR+VEC+ WILGVY EPC+SR RII+TM+ AI TLLDDI+DS+A
Sbjct: 224 RWWKDIDIESRLPFARDRLVECYFWILGVYCEPCYSRGRIIMTMMTAIATLLDDIYDSYA 45
Query: 466 TPQECEILTNC 498
TP ECE+ T C
Sbjct: 44 TPDECELFTKC 12
Score = 119 bits (254), Expect(2) = 3e-048
Identities = 59/96 (61%), Positives = 66/96 (68%)
Frame = -2 / +3
Query: 290 HLVRIFSSC**WSCRTLEFSLASCSTFSCSVPLVSYAWM*YFDS*ILPLLGSGISSEDLT 111
HLV I SSC * SC EF+ ASC TFSC+V S M*YF+S*IL LLG GISS D
Sbjct: 318 HLVMIPSSCW*CSCIIFEFNFASCHTFSCTVASFS*VEM*YFNS*ILTLLGRGISSADFI 497
Query: 110 SCAHNGPFT*GSIISRRLLANAMASSSIVSPWVLKC 3
S A+N P *G I+S+RL N+MA SSI SPWVL C
Sbjct: 498 SRANNDPSM*GIIVSKRLWLNSMAFSSITSPWVLIC 605
Score = 94.1 bits (199), Expect(2) = 3e-048
Identities = 47/70 (67%), Positives = 50/70 (71%)
Frame = -2 / +1
Query: 494 LVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSF 315
LV+ SHS GVA ES ISSK V MA+ IV IIR E*HGS YTP I + HST LSRA GS
Sbjct: 16 LVNNSHSSGVA*ES*ISSKRVAMAVIIVIIIRPRE*HGSQYTPSIQK*HSTSLSRANGSL 195
Query: 314 DPICISSHHL 285
D I IS HHL
Sbjct: 196 DSISISFHHL 225
Score = 83.5 bits (176), Expect(2) = 2e-023
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = +3 / -2
Query: 3 AFQDPWGDNTR*SHRVREKPSGDDAALRERAIVGA*SQILAGDPAA*KGQDLRVKVLHPC 182
A++DPW NT SH V+ K ++ L R I+G *++I DP+ *K +LRVKVLH
Sbjct: 605 AYEDPWRGNT*ESHTVQPKAFRNNDTLHGRVIIGT*NKICT*DPSP*KS*NLRVKVLHLY 426
Query: 183 V*DKWNAA*EGTATCQAELQRSAAPS 260
+*++ ++A*EG ATC+ EL+ +AA S
Sbjct: 425 L*ERCHSA*EGVATCKVELKYNAAAS 348
Score = 74.8 bits (157), Expect(2) = 5e-028
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -3 / +1
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSPARI*LHAPTMALSRRAASSPDG 59
SS QVA PSHA +HLSH C+TLTR+ F* GS +I H P M L R + +
Sbjct: 370 SSTLQVATPSHALWHLSHR*RCSTLTRKF*LF*GEGSQVQILFHVPIMTLPCRVSLFLNA 549
Query: 58 FSRTRWLHRVLSPHGS 11
F T WL +VL HGS
Sbjct: 550 FG*TVWLSQVLPLHGS 597
Score = 72.1 bits (151), Expect(2) = 5e-028
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = -1 / +3
Query: 498 AISEYFTFLWGRERIENIVQECHDGDNHCQYYPGS*MTRFIVYS*DP*KTLHDSISCERK 319
A+ + FTF+W I NI+Q+ +G +HC YY S*+T F VY * P LH+SIS + K
Sbjct: 12 ALGK*FTFIWSCIGIINIIQKGRNGSHHCHYYSSS*ITWFTVYP*YPEIALHESISSKWK 191
Query: 318 F*SDLHILPP 289
* +++ILPP
Sbjct: 192 P*FNIYILPP 221
Score = 68.4 bits (143), Expect(3) = 4e-024
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = -3 / +2
Query: 505 FRCN**VFHILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYLVR 326
+R *+ HI + +N KY P+ S+W+ LS+L L+N+ VHSI L S +TPR YL +
Sbjct: 5 YRRTW*IIHIHLELHRNHKYHPKGSQWQSSLSLLFVLVNNMVHSIPLVSRNSTPRVYLEQ 184
Query: 325 KEVLIRSAYPPT 290
E LI+ YP T
Sbjct: 185 MEALIQYLYPST 220
Score = 59.7 bits (124), Expect(2) = 5e-016
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +2 / -1
Query: 2 RISGPMGRQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSM 181
RI GPM R Y KP S + V + PT KGH +K + RS L+ TS S TS+
Sbjct: 606 RI*GPMER*YLRKPYCSAKGV*KQ*YPTWKGHYWHVK*NLHLRSLSLEELEFTS*STTSL 427
Query: 182 RMRQVERCMRRYCNLPS*TPTFC 250
MR++ +CMRR NL S*T C
Sbjct: 426 PMRKMPQCMRRCGNLQS*TQI*C 358
Score = 48.3 bits (99), Expect(2) = 2e-023
Identities = 30/66 (45%), Positives = 34/66 (51%)
Frame = +2 / -3
Query: 290 GGRICRSDQNFLSHEIESWSVFYGS*EYTMNRVIQEPG*Y*QWLSPS*HSWTIFSILSRP 469
GGRI +Q F EI+SWS G * YT+N VI E * *Q P W IF I +
Sbjct: 220 GGRI*ILNQGFHLLEIDSWSAISGY*GYTVNHVIHEDE***Q**LPLRPFWMIFMIPMQL 41
Query: 470 HKNVKY 487
NV Y
Sbjct: 40 QMNVNY 23
Score = 46.9 bits (96), Expect(2) = 5e-016
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +3 / -1
Query: 288 MVGGYADRIKTSFRTR*NRGVFSMDLRSIL*TVSFKSPDNIDNGYRHRDTLGRYFRF 458
+V GY IK S +R* RGV +D R IL*T+ F +N DN H D G Y F
Sbjct: 222 VVEGYRY*IKASICSR*TRGVLFLDTRGIL*TMLFTRTNNNDNDDCHCDPFG*YL*F 52
Score = 42.3 bits (86), Expect(3) = 4e-024
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1 / +2
Query: 93 PFHVGQHHLQTASRERDGFIEYCLPMGPEMR 1
PFHVG H T E+ GF++Y L MGP MR
Sbjct: 515 PFHVGYHCF*TPLAEQYGFLKYYLSMGPHMR 607
Score = 39.1 bits (79), Expect(3) = 4e-024
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -1 / +2
Query: 285 CQDXXXXXXXXXQNVGVQLGKLQYLLMQRSTCLIRMDVIL*LVDPAPFRQRDLQ 124
C D + VQL KL +LLM LI DV+L*LV+ R+RDL+
Sbjct: 323 CNDTQLMLVMQLHYI*VQLCKLPHLLMHCGIFLIGRDVVL*LVNSNSSRERDLK 484
>gb|CW313304.1|CW313304 104_803_11471215_148_35790_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471215, DNA
sequence
Length = 741
Score = 155 bits (334), Expect(3) = 3e-071
Identities = 56/73 (76%), Positives = 69/73 (94%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+QI S+LPFARDR+VEC+LWILGVYYEPC+SR RII+TM+IAIVTLLDDI+DS+A
Sbjct: 348 RWWKDIQIESRLPFARDRVVECYLWILGVYYEPCYSRGRIIVTMIIAIVTLLDDIYDSYA 169
Query: 466 TPQECEILTNCIE 504
TP+ECE+L CI+
Sbjct: 168 TPEECELLNKCIQ 130
Score = 114 bits (244), Expect(3) = 2e-050
Identities = 55/76 (72%), Positives = 58/76 (76%)
Frame = -2 / +2
Query: 512 SQLSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILS 333
+ L M L+S SHS GVA ES ISSK VTMAI IV IIR LE*HGS*YTP IH+ HST LS
Sbjct: 122 TNL*MHLLSNSHSSGVA*ES*ISSKRVTMAIIIVTIIRPLE*HGS*YTPNIHK*HSTTLS 301
Query: 332 RAKGSFDPICISSHHL 285
RA GS D ICIS HHL
Sbjct: 302 RANGSLDSICISFHHL 349
Score = 101 bits (216), Expect(3) = 3e-071
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +1 / -2
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
A E++S+LEI LP+R RI+ESKYYI YE +HEKVLQLAKLNSN++Q HHQ EL ++
Sbjct: 632 AREIKSALEISLPRRVRIFESKYYISTYEKDAMVHEKVLQLAKLNSNIMQFHHQHELAMI 453
Query: 283 TR 288
TR
Sbjct: 452 TR 447
Score = 86.8 bits (183), Expect(2) = 2e-020
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = -1 / +1
Query: 501 DAISEYFTFLWGRERIENIVQECHDGDNHCQYYPGS*MTRFIVYS*DP*KTLHDSISCER 322
+A+ + FTF W RI NI+Q+ H+GDNHC YY S*+T F+VY * P LHDSIS +
Sbjct: 133 NALIK*FTFFWSCIRIINIIQKGHNGDNHCYYYSAS*ITWFVVYP*YPQIALHDSISSKW 312
Query: 321 KF*SDLHILPP 289
K * +L+ILPP
Sbjct: 313 KP*FNLYILPP 345
Score = 86.8 bits (183), Expect(3) = 2e-024
Identities = 41/91 (45%), Positives = 50/91 (54%)
Frame = -3 / +3
Query: 508 SFRCN**VFHILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYLV 329
+F C *V HIL+ KN KY P+ S+WR* L +L GLLN+ V SI L S +TPR YL
Sbjct: 126 TFECTY*VIHILLELHKNHKYHPKGSQWR*SLLLLFGLLNNMVRSIPLISTNSTPRLYLE 305
Query: 328 RKEVLIRSAYPPTIXXXXXXXXXXXXAERWS 236
+ E LI+S YP T WS
Sbjct: 306 QMEALIQSVYPSTTYKFIRDNIVNNVTANWS 398
Score = 79.0 bits (166), Expect(3) = 2e-050
Identities = 37/65 (56%), Positives = 44/65 (67%)
Frame = -2 / +1
Query: 290 HLVRIFSSC**WSCRTLEFSLASCSTFSCSVPLVSYAWM*YFDS*ILPLLGSGISSEDLT 111
HLV I SSC *W+C EF+ ASC+TFSC++ SY M*YFDS IL LG ISS D
Sbjct: 445 HLVIIASSCW*WNCIIFEFNFASCNTFSCTMASFSYVEM*YFDSKILTRLGREISSADFI 624
Query: 110 SCAHN 96
S A++
Sbjct: 625 SRAND 639
Score = 72.5 bits (152), Expect(3) = 1e-018
Identities = 40/72 (55%), Positives = 43/72 (59%)
Frame = +2 / -2
Query: 290 GGRICRSDQNFLSHEIESWSVFYGS*EYTMNRVIQEPG*Y*QWLSPS*HSWTIFSILSRP 469
GGRI R +Q F EIESWS G * YT N VIQE * *Q LSP * W IF IL +
Sbjct: 344 GGRIYRLNQGFHLLEIESWSAICGY*GYTTNHVIQEAE***Q*LSPL*PFWMIFMILMQL 165
Query: 470 HKNVKYSLIASK 505
KNV Y + A K
Sbjct: 164 QKNVNYLISAFK 129
Score = 72.5 bits (152), Expect(3) = 5e-021
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +3 / -3
Query: 288 MVGGYADRIKTSFRTR*NRGVFSMDLRSIL*TVSFKSPDNIDNGYRHRDTLGRYFRFFRD 467
+V GY D IK S +R*+RGV +D+R IL T+ FK P+N +N YRH D G Y F +
Sbjct: 346 VVEGYTD*IKASICSR*SRGVLFVDIRGILRTMLFKRPNNSNNDYRHCDPFG*YL*FLCN 167
Query: 468 PTRM*NTH*LHRKL 509
RM* T *+H K+
Sbjct: 166 SRRM*IT**VHSKV 125
Score = 51.0 bits (105), Expect(3) = 3e-071
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
AH RTHGE IL EA+ F++ RLE +LPY++G L
Sbjct: 731 AHMRTHGEIILREAMLFSQRRLETILPYMEGSL 633
Score = 45.5 bits (93), Expect(3) = 2e-050
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 98 NGPFT*GSIISRRLLANAMASSSIVSPWVL 9
N P GSI+S+RL N+MAS SI+SPWVL
Sbjct: 634 NDPSMXGSIVSKRLWLNSMASLSIISPWVL 723
Score = 38.6 bits (78), Expect(3) = 5e-021
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3 / -1
Query: 96 IVGA*SQILAGDPAA*KGQDLRVKVLHPCV*DKWNAA*EGTATCQAELQRSAAPSSA 266
++ *++I D + * + VKVLH +* + + A*E TC+ EL+ A PS A
Sbjct: 639 VIST*NKICT*DLSP*TS*NF*VKVLHLYI*KRCHGA*ESVTTCKVELEYYAVPSPA 469
Score = 37.7 bits (76), Expect(3) = 1e-018
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -3
Query: 128 RSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TPTFC 250
RS L SQSITS+ M+++ CMR+ NL S*T C
Sbjct: 607 RSLSLDELEFLSQSITSLHMKKMPWCMRKCYNLQS*TRILC 485
Score = 35.4 bits (71), Expect(3) = 2e-024
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / +2
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRR 155
SS QV SHA +HL H CNTLT++
Sbjct: 497 SSTLQVVTLSHAPWHLFHM*RCNTLTQK 580
Score = 34.5 bits (69), Expect(2) = 2e-020
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / +3
Query: 246 NVGVQLGKLQYLLMQRSTCLIRMDVIL*LVDPAPFRQRDLQ 124
N+ VQL KL + LM I DVIL*L + R+RDL+
Sbjct: 489 NIRVQLCKL*HFLMHHGIFFICRDVIL*LKNSNSSRERDLK 611
Score = 29.0 bits (57), Expect(3) = 2e-024
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1 / +3
Query: 93 PFHVGQHHLQTASRERDGFIEYCLPMGPEM 4
PFHV + T E GF +Y L MGP M
Sbjct: 639 PFHVX*YCF*TPLAE*HGFPQYNLSMGPHM 728
Score = 28.1 bits (55), Expect(3) = 5e-021
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3 / -1
Query: 3 AFQDPWGDNTR*SHRVREKPSGDDAALRERAI 98
+++DPW D T SH ++ K ++ R I
Sbjct: 729 SYEDPWRDYTEGSHAIQPKAFRNNTTXHGRVI 634
Score = 23.1 bits (44), Expect(3) = 1e-018
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2 / -3
Query: 11 GPMGRQYSMKPSRSREAVWR*CCPT*KGH 97
GPM R Y KP S + V + T KGH
Sbjct: 721 GPMERLY*GKPCYSAKGV*KQYYXTWKGH 635
>gb|CW029687.1|CW029687 104_257_10499816_116_30402 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499816, DNA
sequence
Length = 808
Score = 155 bits (334), Expect(3) = 1e-067
Identities = 56/73 (76%), Positives = 69/73 (94%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+QI S+LPFARDR+VEC+LWILGVYYEPC+SR RII+TM+IAIVTLLDDI+DS+A
Sbjct: 441 RWWKDIQIESRLPFARDRVVECYLWILGVYYEPCYSRGRIIVTMIIAIVTLLDDIYDSYA 262
Query: 466 TPQECEILTNCIE 504
TP+ECE+L CI+
Sbjct: 261 TPEECELLNKCIQ 223
Score = 114 bits (244), Expect(2) = 4e-043
Identities = 55/76 (72%), Positives = 58/76 (76%)
Frame = -2 / +2
Query: 512 SQLSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILS 333
+ L M L+S SHS GVA ES ISSK VTMAI IV IIR LE*HGS*YTP IH+ HST LS
Sbjct: 215 TNL*MHLLSNSHSSGVA*ES*ISSKRVTMAIIIVTIIRPLE*HGS*YTPNIHK*HSTTLS 394
Query: 332 RAKGSFDPICISSHHL 285
RA GS D ICIS HHL
Sbjct: 395 RANGSLDSICISFHHL 442
Score = 101 bits (216), Expect(3) = 1e-067
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +1 / -3
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
A E++S+LEI LP+R RI+ESKYYI YE +HEKVLQLAKLNSN++Q HHQ EL ++
Sbjct: 725 AREIKSALEISLPRRVRIFESKYYISTYEKDAMVHEKVLQLAKLNSNIMQFHHQHELAMI 546
Query: 283 TR 288
TR
Sbjct: 545 TR 540
Score = 86.8 bits (183), Expect(2) = 3e-020
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = -1 / +1
Query: 501 DAISEYFTFLWGRERIENIVQECHDGDNHCQYYPGS*MTRFIVYS*DP*KTLHDSISCER 322
+A+ + FTF W RI NI+Q+ H+GDNHC YY S*+T F+VY * P LHDSIS +
Sbjct: 226 NALIK*FTFFWSCIRIINIIQKGHNGDNHCYYYSAS*ITWFVVYP*YPQIALHDSISSKW 405
Query: 321 KF*SDLHILPP 289
K * +L+ILPP
Sbjct: 406 KP*FNLYILPP 438
Score = 86.8 bits (183), Expect(3) = 1e-027
Identities = 41/91 (45%), Positives = 50/91 (54%)
Frame = -3 / +3
Query: 508 SFRCN**VFHILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYLV 329
+F C *V HIL+ KN KY P+ S+WR* L +L GLLN+ V SI L S +TPR YL
Sbjct: 219 TFECTY*VIHILLELHKNHKYHPKGSQWR*SLLLLFGLLNNMVRSIPLISTNSTPRLYLE 398
Query: 328 RKEVLIRSAYPPTIXXXXXXXXXXXXAERWS 236
+ E LI+S YP T WS
Sbjct: 399 QMEALIQSVYPSTTYKFIRDNIVNNVTANWS 491
Score = 81.3 bits (171), Expect(2) = 4e-043
Identities = 42/88 (47%), Positives = 52/88 (59%)
Frame = -2 / +1
Query: 290 HLVRIFSSC**WSCRTLEFSLASCSTFSCSVPLVSYAWM*YFDS*ILPLLGSGISSEDLT 111
HLV I SSC *W+C EF+ ASC+TFSC++ SY M*YFDS IL LG ISS D
Sbjct: 538 HLVIIASSCW*WNCIIFEFNFASCNTFSCTMASFSYVEM*YFDSKILTRLGREISSADFI 717
Query: 110 SCAHNGPFT*GSIISRRLLANAMASSSI 27
S A++ + R L + +SS I
Sbjct: 718 SRANDPSMXGSIVSKRLWLNSMASSSII 801
Score = 72.5 bits (152), Expect(2) = 3e-017
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +3 / -1
Query: 288 MVGGYADRIKTSFRTR*NRGVFSMDLRSIL*TVSFKSPDNIDNGYRHRDTLGRYFRFFRD 467
+V GY D IK S +R*+RGV +D+R IL T+ FK P+N +N YRH D G Y F +
Sbjct: 439 VVEGYTD*IKASICSR*SRGVLFVDIRGILRTMLFKRPNNSNNDYRHCDPFG*YL*FLCN 260
Query: 468 PTRM*NTH*LHRKL 509
RM* T *+H K+
Sbjct: 259 SRRM*IT**VHSKV 218
Score = 72.5 bits (152), Expect(2) = 5e-017
Identities = 40/72 (55%), Positives = 43/72 (59%)
Frame = +2 / -3
Query: 290 GGRICRSDQNFLSHEIESWSVFYGS*EYTMNRVIQEPG*Y*QWLSPS*HSWTIFSILSRP 469
GGRI R +Q F EIESWS G * YT N VIQE * *Q LSP * W IF IL +
Sbjct: 437 GGRIYRLNQGFHLLEIESWSAICGY*GYTTNHVIQEAE***Q*LSPL*PFWMIFMILMQL 258
Query: 470 HKNVKYSLIASK 505
KNV Y + A K
Sbjct: 257 QKNVNYLISAFK 222
Score = 39.6 bits (80), Expect(3) = 1e-027
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -2 / +1
Query: 98 NGPFT*GSIISRRLLANAMASSSIVSP 18
N P GSI+S+RL N+MASSSI+SP
Sbjct: 727 NDPSMXGSIVSKRLWLNSMASSSIISP 807
Score = 39.1 bits (79), Expect(3) = 1e-067
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1 / -3
Query: 19 GETILDEAIAFARSRLEMMLPYVKGPL 99
GE IL+EA+ F++ RLE +LPY++G L
Sbjct: 806 GEIILEEAMLFSQRRLETILPYMEGSL 726
Score = 38.6 bits (78), Expect(2) = 3e-017
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3 / -2
Query: 96 IVGA*SQILAGDPAA*KGQDLRVKVLHPCV*DKWNAA*EGTATCQAELQRSAAPSSA 266
++ *++I D + * + VKVLH +* + + A*E TC+ EL+ A PS A
Sbjct: 732 VIST*NKICT*DLSP*TS*NF*VKVLHLYI*KRCHGA*ESVTTCKVELEYYAVPSPA 562
Score = 37.7 bits (76), Expect(2) = 5e-017
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -1
Query: 128 RSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TPTFC 250
RS L SQSITS+ M+++ CMR+ NL S*T C
Sbjct: 700 RSLSLDELEFLSQSITSLHMKKMPWCMRKCYNLQS*TRILC 578
Score = 35.4 bits (71), Expect(3) = 1e-027
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / +2
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRR 155
SS QV SHA +HL H CNTLT++
Sbjct: 590 SSTLQVVTLSHAPWHLFHM*RCNTLTQK 673
Score = 34.5 bits (69), Expect(2) = 3e-020
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / +3
Query: 246 NVGVQLGKLQYLLMQRSTCLIRMDVIL*LVDPAPFRQRDLQ 124
N+ VQL KL + LM I DVIL*L + R+RDL+
Sbjct: 582 NIRVQLCKL*HFLMHHGIFFICRDVIL*LKNSNSSRERDLK 704
>gb|AC152914.1| Sorghum bicolor clone SB132E20, *** SEQUENCING IN PROGRESS ***, 3
ordered pieces
Length = 123556
Score = 128 bits (275), Expect(5) = 2e-050
Identities = 44/75 (58%), Positives = 64/75 (85%)
Frame = +1 / -3
Query: 280 LTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDS 459
++RWW+++++ S+L FARDR+VEC+ WI+GVYYEP +SR RIILT V+AIV++LDD +D
Sbjct: 70508 ISRWWKNLELESRLSFARDRVVECYFWIVGVYYEPSYSRGRIILTKVLAIVSILDDTYDV 70329
Query: 460 FATPQECEILTNCIE 504
+ T QECE+ T+C+E
Sbjct: 70328 YGTLQECELFTSCVE 70284
Score = 81.7 bits (172), Expect(5) = 2e-022
Identities = 43/76 (56%), Positives = 48/76 (63%)
Frame = -2 / +1
Query: 512 SQLSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILS 333
+ LS QLV+ SHSC V S +SSK TMA T VNIIR E* GS*YTP I + HST LS
Sbjct: 70276 THLSTQLVNNSHSCKVP*TS*VSSKMETMASTFVNIIRPRE*LGS*YTPTIQK*HSTTLS 70455
Query: 332 RAKGSFDPICISSHHL 285
RA + D HHL
Sbjct: 70456 RANDNLDSSSRFFHHL 70503
Score = 49.2 bits (101), Expect(5) = 2e-050
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +1 / -1
Query: 196 GTLHEKVLQLAKLNSNVLQLHHQQELKILTR 288
G +E +++LAKLNSN++QL +QQEL+I+TR
Sbjct: 70723 GQANEVIMELAKLNSNIIQLQYQQELRIITR 70631
Score = 44.1 bits (90), Expect(5) = 2e-050
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RT+GE ILDEA++F + LE +L ++GPL
Sbjct: 78582 AYLRTNGEIILDEAVSFTKRSLESLLTNLQGPL 78484
Score = 43.7 bits (89), Expect = 0.003
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -1 / +3
Query: 456 IENIVQECHDGDNHCQYYPGS*MTRFIVYS*DP*KTLHDSISCERKF*SDLHILPP 289
I +++Q + G + CQYY S*+T FI+Y P H+SI+ + * L +LPP
Sbjct: 70332 IISVIQNGNYGKHFCQYYSSS*VTWFIIYPYYPKIAFHNSITSK**P*FKLQVLPP 70499
Score = 42.8 bits (87), Expect(5) = 2e-050
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1 / -3
Query: 505 SWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRED 612
SWDP A LP MKF KI+D+YQ+I + L E+
Sbjct: 70052 SWDPMVANGLPENMKFIFGKIMDTYQSIEDELSPEE 69945
Score = 40.9 bits (83), Expect(5) = 2e-022
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -2 / +3
Query: 290 HLVRIFSSC**WSCRTLEFSLASCSTFSCSVP 195
HLV I SSC* WSC LEF+ AS S + P
Sbjct: 70629 HLVMILSSC*YWSCMILEFNFASSIITSLACP 70724
Score = 40.9 bits (83), Expect = 0.017
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = -3 / +2
Query: 508 SFRCN**VFHILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYLV 329
+F N *+ H LV ++ K P+ W+ LSIL L+++ VH+I L S + P+ Y
Sbjct: 70280 TFLHNL*ITHTLVKFHRHHKCHPKWKLWQALLSILFVLVSNLVHNIPLLSKNSIPQLYHE 70459
Query: 328 RKEVLIRS 305
+ LI++
Sbjct: 70460 QMITLIQA 70483
Score = 40.5 bits (82), Expect(5) = 2e-050
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / -2
Query: 103 AHEVRSSLEIPLPKRGRIYESKYY 174
AHEV+ +LEIPLP+R RIYE+ Y
Sbjct: 78483 AHEVKCALEIPLPRRVRIYEAVGY 78412
Score = 40.0 bits (81), Expect = 0.032
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +2 / -1
Query: 290 GGRICRSDQNFLSHEIESWSVFYGS*EYTMNRVIQEPG*Y*QWLSPS*HSWTIFSILSRP 469
GGR +Q + IE W+ +G * Y MN+V E *Y*Q P W +
Sbjct: 70498 GGRTWSLNQGYHLLVIELWNAIFG**GYIMNQVTHEDE*Y*QKCLP*FPFWMTLMMSMEL 70319
Query: 470 HKNVKY 487
+K+V Y
Sbjct: 70318 YKSVSY 70301
Score = 29.5 bits (58), Expect(5) = 2e-022
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2 / +1
Query: 587 MVW*LSNIFSRANFMQPGRS*APLGSQL 504
M+ *+S IF + NFM GR A +GSQL
Sbjct: 69970 ML**VSIIFPKMNFMFSGRPLATIGSQL 70053
Score = 29.0 bits (57), Expect(5) = 2e-022
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2 / +2
Query: 98 NGPFT*GSIISRRLLANAMASSSIVSPWVLK 6
NGP + S+ LL N ASS I+SP VL+
Sbjct: 78485 NGPCRLVNNDSKLLLVNETASSRIISPLVLR 78577
Score = 27.6 bits (54), Expect(5) = 2e-022
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 161 S*ILPLLGSGISSEDLTSCAH 99
S*IL LLG GISS TS A+
Sbjct: 78425 S*ILTLLGKGISSAHFTSWAN 78487
>gb|CW434838.1|CW434838 fsbb001f150l16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150l16, DNA
sequence
Length = 764
Score = 87.7 bits (185), Expect(3) = 1e-035
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+ + + + L F RDRIVEC W+ G +EP +S AR+I T + A +T+LDDI D+++
Sbjct: 204 RWWKQLNVETNLSFIRDRIVECHFWMTGACFEPQYSLARVISTKMTACITILDDIMDTYS 25
Query: 466 TPQECEIL 489
T +E +L
Sbjct: 24 TTEEAMLL 1
Score = 58.8 bits (122), Expect(3) = 1e-035
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1 / -2
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
A EV +L+ PL +R RI E++ YI YE +E +L+ AKLN N+LQL + +ELK +
Sbjct: 502 ADEVSVTLQTPLFRRVRILETRNYIPIYEKEAARNEVILEFAKLNFNLLQLIYCEELKKV 323
Query: 283 T 285
T
Sbjct: 322 T 320
Score = 44.1 bits (90), Expect(2) = 9e-006
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = -2 / +2
Query: 455 SKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICISSHHL 285
S +SS V A+ V I RA E GS + P I + HSTILSR K F HHL
Sbjct: 35 SIMSSNIVIQAVIFVLITRAREYCGSKHAPVIQK*HSTILSRIKLKFVSTLSCFHHL 205
Score = 42.3 bits (86), Expect(3) = 1e-035
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RTHGE +LDEAI F R +LE +L ++ L
Sbjct: 601 AYLRTHGEKVLDEAIIFTRHQLEALLDSLESTL 503
Score = 27.6 bits (54), Expect(2) = 9e-006
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 43 WLHRVLSPHGS* 8
WLH+VLSPH S*
Sbjct: 559 WLHQVLSPHES* 594
>gb|CW435026.1|CW435026 fsbb001f150p20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150p20, DNA
sequence
Length = 642
Score = 87.7 bits (185), Expect(3) = 1e-035
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+ + + + L F RDRIVEC W+ G +EP +S AR+I T + A +T+LDDI D+++
Sbjct: 204 RWWKQLNVETNLSFIRDRIVECHFWMTGACFEPQYSLARVISTKMTACITILDDIMDTYS 25
Query: 466 TPQECEIL 489
T +E +L
Sbjct: 24 TTEEAMLL 1
Score = 58.8 bits (122), Expect(3) = 1e-035
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1 / -3
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
A EV +L+ PL +R RI E++ YI YE +E +L+ AKLN N+LQL + +ELK +
Sbjct: 502 ADEVSVTLQTPLFRRVRILETRNYIPIYEKEAARNEVILEFAKLNFNLLQLIYCEELKKV 323
Query: 283 T 285
T
Sbjct: 322 T 320
Score = 44.1 bits (90), Expect(2) = 8e-006
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = -2 / +2
Query: 455 SKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICISSHHL 285
S +SS V A+ V I RA E GS + P I + HSTILSR K F HHL
Sbjct: 35 SIMSSNIVIQAVIFVLITRAREYCGSKHAPVIQK*HSTILSRIKLKFVSTLSCFHHL 205
Score = 42.3 bits (86), Expect(3) = 1e-035
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RTHGE +LDEAI F R +LE +L ++ L
Sbjct: 601 AYLRTHGEKVLDEAIIFTRHQLEALLDSLESTL 503
Score = 27.6 bits (54), Expect(2) = 8e-006
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 43 WLHRVLSPHGS* 8
WLH+VLSPH S*
Sbjct: 559 WLHQVLSPHES* 594
>gb|CW435030.1|CW435030 fsbb001f150p22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150p22, DNA
sequence
Length = 765
Score = 84.5 bits (178), Expect(3) = 1e-034
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+ + + + L F RDRIVEC W+ G +EP +S AR+I T + A +T+LDDI D++
Sbjct: 204 RWWKQLNVETNLSFIRDRIVECHFWMTGACFEPQYSLARVISTKMTACITILDDIMDTYG 25
Query: 466 TPQECEIL 489
+E +L
Sbjct: 24 KTEEAMLL 1
Score = 58.8 bits (122), Expect(3) = 1e-034
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1 / -3
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
A EV +L+ PL +R RI E++ YI YE +E +L+ AKLN N+LQL + +ELK +
Sbjct: 502 ADEVSVTLQTPLFRRVRILETRNYIPIYEKEAARNEVILEFAKLNFNLLQLIYCEELKKV 323
Query: 283 T 285
T
Sbjct: 322 T 320
Score = 44.1 bits (90), Expect(2) = 9e-006
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = -2 / +2
Query: 455 SKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICISSHHL 285
S +SS V A+ V I RA E GS + P I + HSTILSR K F HHL
Sbjct: 35 SIMSSNIVIQAVIFVLITRAREYCGSKHAPVIQK*HSTILSRIKLKFVSTLSCFHHL 205
Score = 42.3 bits (86), Expect(3) = 1e-034
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RTHGE +LDEAI F R +LE +L ++ L
Sbjct: 601 AYLRTHGEKVLDEAIIFTRHQLEALLDSLESTL 503
Score = 27.6 bits (54), Expect(2) = 9e-006
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 43 WLHRVLSPHGS* 8
WLH+VLSPH S*
Sbjct: 559 WLHQVLSPHES* 594
>gb|CW041892.1|CW041892 104_275_10506814_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506814, DNA
sequence
Length = 696
Score = 93.6 bits (198), Expect(3) = 1e-032
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW++ Q S++ F RDRIVE + W+ G Y+P +SR+RIILT V ++ ++DD+FD++
Sbjct: 332 RWWKEFQAKSEMTFVRDRIVEMYFWMNGACYDPLYSRSRIILTKVTGLIAIIDDMFDTYG 153
Query: 466 TPQECEILTNCI 501
T +EC T +
Sbjct: 152 TTEECLEFTEAL 117
Score = 55.1 bits (114), Expect(3) = 1e-032
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1 / -2
Query: 109 EVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
EV SSL PL +R I E++ YI YE T +E +L+ AKLN N+ QL +ELK T
Sbjct: 602 EVSSSLHTPLFRRVGILEARNYIPIYEKEATRNEDILEFAKLNFNLQQLIFCEELKHCT 426
Score = 46.0 bits (94), Expect = 5e-004
Identities = 30/69 (43%), Positives = 35/69 (50%)
Frame = -2 / +1
Query: 491 VSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFD 312
V+ HS V S ISS +T V+IIR E GS*+ P I + STILS K D
Sbjct: 127 VNSRHSSVVPYVSNISSIIAMRPVTFVSIIREREYSGS*HAPFIQKYISTILSLTKVISD 306
Query: 311 PICISSHHL 285
S HHL
Sbjct: 307 LAWNSFHHL 333
Score = 30.4 bits (60), Expect(3) = 1e-032
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1 / -2
Query: 16 HGETILDEAIAFARSRLEMMLPYVKGPL 99
H E +LDEAI+F R L+ +L + PL
Sbjct: 692 HEEKVLDEAISFTRCALKDILVLPESPL 609
>gb|CN142690.1|CN142690 WOUND1_11_C12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_C12_A002 5', mRNA sequence
Length = 641
Score = 124 bits (265), Expect = 1e-027
Identities = 55/146 (37%), Positives = 84/146 (57%)
Frame = +1 / +1
Query: 112 VRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRW 291
V +LEIPL R E++++I Y + +LQ AKL+ N +Q HQ++L +T W
Sbjct: 25 VAHALEIPLHWRAPRLETRWFIDYYARDINMCPLLLQFAKLDFNQVQDEHQKDLAAVTWW 204
Query: 292 WEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATP 471
W ++ +G KLPFARDR++ECF + G+ ++P R +L V ++ LDD++D + T
Sbjct: 205 WRNIGLGEKLPFARDRLMECFHYANGIVWDPKLGPCRQMLAKVSNLIVHLDDVYDVYGTM 384
Query: 472 QECEILTNCIESWDPKGAQDLPGCMK 549
E + TN I WD + LP MK
Sbjct: 385 DELVLFTNAIARWDAIPNERLPEYMK 462
Score = 35.9 bits (72), Expect = 0.56
Identities = 37/109 (33%), Positives = 46/109 (42%)
Frame = -2 / -1
Query: 548 FMQPGRS*APLGSQLSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YT 369
FM G + S L++ V + S V S SSK T+ +I R GS
Sbjct: 461 FMYSGSLSFGIASHLAIAFVKSTSSSMVPYTS*TSSK*TIRLETLASI*RHGPSFGSQTI 282
Query: 368 PKIHRKHSTILSRAKGSFDPICISSHHLVRIFSSC**WSCRTLEFSLAS 222
P KHS S A GSF P + HH V S * S L+ SLA+
Sbjct: 281 PFA*WKHSIRRSLANGSFSPSPMFLHHHVTAARSF*CSS*TWLKSSLAN 135
Score = 34.1 bits (68), Expect = 2.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1 / -3
Query: 549 FHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQ 439
FH WE L + IP + I E + F+ G I NI+Q
Sbjct: 462 FHVLWESLIWYCIPPCNRICEEYKFIHGSIHIINIIQ 352
>gb|CW489685.1|CW489685 fsbb001f274l24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f274l24, DNA
sequence
Length = 349
Score = 120 bits (256), Expect = 2e-026
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ I S+LPF RDR+VEC+ WILGV +PC+SR RII+ M+ I LLDDI+DS+A
Sbjct: 230 RWWKDIDIESRLPFPRDRLVECYFWILGVSCDPCYSRGRIIMPMMTPIPPLLDDIYDSYA 51
Query: 466 TPQECEILTNCIE 504
TP ECE+ T I+
Sbjct: 50 TPDECELFTKRIQ 12
Score = 81.7 bits (172), Expect = 9e-015
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -2 / +1
Query: 512 SQLSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILS 333
+ L M+LV+ SHS GVA ES ISSK M + I IIR E*HGS TP I + HST LS
Sbjct: 4 TDL*MRLVNNSHSSGVA*ES*ISSKRGGMGVIIGIIIRPRE*HGSQDTPSIQK*HSTSLS 183
Query: 332 RAKGSFDPICISSHHL 285
R GS D I IS HHL
Sbjct: 184 RGNGSLDSISISFHHL 231
Score = 64.8 bits (135), Expect = 1e-009
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = -3 / +2
Query: 508 SFRCN**VFHILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYLV 329
+F C *+ HI + +N KY P+ + W L++L GL N+ H I L S +TPR YL
Sbjct: 8 TFECAW*IIHIHLELHRNHKYHPKGAEWESSLALLFGLGNNMGHRIPLVSRNSTPRVYLE 187
Query: 328 RKEVLIRSAYPPT 290
E LI+ YP T
Sbjct: 188 EMEALIQYLYPST 226
Score = 57.9 bits (120), Expect = 1e-007
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = -1 / +3
Query: 501 DAISEYFTFLWGRERIENIVQECHDGDNHCQYYPGS*MTRFIVYS*DP*KTLHDSISCER 322
+A+ + FTF+W I NI+Q+ +G +H YY S +T Y * P LH+SIS +
Sbjct: 15 NALGK*FTFIWSCIGIINIIQKGRNGSHHWHYYSASGITWVTGYP*YPEIALHESISRKW 194
Query: 321 KF*SDLHILPP 289
K * +++ILPP
Sbjct: 195 KP*FNIYILPP 227
Score = 45.1 bits (92), Expect = 0.001
Identities = 28/74 (37%), Positives = 36/74 (48%)
Frame = +3 / -2
Query: 288 MVGGYADRIKTSFRTR*NRGVFSMDLRSIL*TVSFKSPDNIDNGYRHRDTLGRYFRFFRD 467
+V GY IK S +R* RGV +D R IL* + F P+N N H G Y F +
Sbjct: 228 VVEGYRY*IKASISSR*TRGVLFLDTRGIL*PMLFPRPNNNANDDSHSAPFG*YL*FLCN 49
Query: 468 PTRM*NTH*LHRKL 509
M* + H K+
Sbjct: 48 SR*M*IIYQAHSKV 7
Score = 33.1 bits (66), Expect = 3.8
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2 / -1
Query: 290 GGRICRSDQNFLSHEIESWSVFYGS*EYTMNRVIQE 397
GGRI +Q F EI+SWS G * Y + VI E
Sbjct: 226 GGRI*ILNQGFHFLEIDSWSAISGY*GYPVTHVIPE 119
>gb|CN144254.1|CN144254 WOUND1_21_C07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_21_C07_A002 3', mRNA sequence
Length = 823
Score = 116 bits (249), Expect = 2e-025
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +1 / +2
Query: 439 LDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRED 612
LDDI+DS+ATP+ECE+L CI+SWD KGA +LP CMKFALEKILDSY+TI NMLH+E+
Sbjct: 2 LDDIYDSYATPEECELLNKCIQSWDSKGAHELPECMKFALEKILDSYETIENMLHQEE 175
Score = 78.0 bits (164), Expect = 1e-013
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = +2 / +3
Query: 440 WTIFSILSRPHKNVKYSLIASKAGIPKGLKTSQVA*NLL*RRYWIATRPLQICSTER 610
W IF IL + KNV Y + A KAGI +GL +S A*NLL R+YWIAT+PL+IC T R
Sbjct: 3 WMIFMILMQLQKNVNYLISAFKAGIQRGLMSSLSA*NLLWRKYWIATKPLKICFTRR 173
Score = 74.4 bits (156), Expect = 1e-012
Identities = 41/58 (70%), Positives = 43/58 (74%)
Frame = -2 / -2
Query: 611 SSRWSIFVMVW*LSNIFSRANFMQPGRS*APLGSQLSMQLVSISHSCGVAKESKISSK 438
SS SIF MV *LSNIFS+ANFM G S*AP SQL M L+S SHS GVA ES ISSK
Sbjct: 174 SSW*SIFSMVS*LSNIFSKANFMHSGSS*APFESQL*MHLLSNSHSSGVA*ES*ISSK 1
Score = 73.9 bits (155), Expect = 2e-012
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = -1 / -1
Query: 612 VLSVEHICNGLVAIQYLL*SKFHATWEVLSPFGIPAFDAISEYFTFLWGRERIENIVQ 439
+L V+HI NG VAIQY L SKFHA E++SP IPA +A+ + FTF W RI NI+Q
Sbjct: 175 LLLVKHIFNGFVAIQYFLQSKFHALRELMSPL*IPALNALIK*FTFFWSCIRIINIIQ 2
Score = 69.3 bits (145), Expect = 5e-011
Identities = 31/57 (54%), Positives = 34/57 (59%)
Frame = -3 / -3
Query: 610 PLGGAYL*WSGSYPISSLEQISCNLGGLEPLWDPSFRCN**VFHILVGSRKNRKYRP 440
P G AY W SYPI S +QISC G EP +PSF C *V HIL+ KN KY P
Sbjct: 173 PPGEAYFQWFRSYPIFSPKQISCTQGAHEPPLNPSFECTY*VIHILLELHKNHKYHP 3
Score = 57.0 bits (118), Expect = 3e-007
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3 / +1
Query: 441 GRYFRFFRDPTRM*NTH*LHRKLGSQRGSRPPRLHEICSREDIG*LPDHYKYAPPRG 611
G Y F + RM* T *+H KLG + GS P +HEIC E+IG*L +H KYA P G
Sbjct: 4 G*YL*FLCNSRRM*IT**VHSKLGFKGGS*AP*VHEICFGENIG*LRNH*KYASPGG 174
>gb|CW482189.1|CW482189 fsbb001f242c13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242c13, DNA
sequence
Length = 705
Score = 89.5 bits (189), Expect(2) = 2e-023
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+ + + + L F RDRIVEC W+ G +EP +S AR+I T + A +T+LDDI D+++
Sbjct: 237 RWWKQLNVETNLSFIRDRIVECHFWMTGACFEPQYSLARVISTKMTACITILDDIMDTYS 416
Query: 466 TPQECEILTNCI 501
T +E +L I
Sbjct: 417 TTEEAMLLAEAI 452
Score = 44.1 bits (90), Expect = 0.002
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = -2 / -3
Query: 455 SKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICISSHHL 285
S +SS V A+ V I RA E GS + P I + HSTILSR K F HHL
Sbjct: 406 SIMSSNIVIQAVIFVLITRAREYCGSKHAPVIQK*HSTILSRIKLKFVSTLSCFHHL 236
Score = 40.5 bits (82), Expect(2) = 2e-023
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1 / +2
Query: 172 YIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
YI YE +E +L+ AKLN N+LQL + +ELK +T
Sbjct: 8 YIPIYEKEAARNEVILEFAKLNFNLLQLIYCEELKKVT 121
>gb|CW428404.1|CW428404 fsbb001f141b12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f141b12, DNA
sequence
Length = 716
Score = 70.7 bits (148), Expect(3) = 5e-023
Identities = 27/72 (37%), Positives = 46/72 (63%)
Frame = +1 / +3
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFAT 468
W E + +ARDR+VE W++GV++EP +S +R +LT + IV++LDD++D+ T
Sbjct: 462 WTEFQTQANTSIYARDRMVEMHFWMMGVFFEPQYSYSRKMLTQLFMIVSILDDLYDNHCT 641
Query: 469 PQECEILTNCIE 504
+E + T +E
Sbjct: 642 TEEGNVFTAALE 677
Score = 45.1 bits (92), Expect(3) = 5e-023
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +1 / +2
Query: 94 PLWAHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQEL 273
P EV+ +LE PL +R + +++ YI YE + + +L+ +KL+ N+L + +EL
Sbjct: 170 PQLKEEVKYALETPLFRRLKRVQTRQYISIYEKNTAHNNMLLEFSKLDFNILLTLYCEEL 349
Query: 274 KILT 285
K LT
Sbjct: 350 KDLT 361
Score = 30.4 bits (60), Expect(3) = 5e-023
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 1 AHFRTHGETILDEAIAFARSRLEMML 78
AH R GE ILD + F +S+L+ ++
Sbjct: 80 AHLRVKGEEILDNILIFTKSQLQCIV 157
>gb|CW365184.1|CW365184 fsbb001f037j18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037j18, DNA
sequence
Length = 730
Score = 101 bits (216), Expect = 8e-021
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPLWAHEVRSSLEIPLPKRGRIYESKYYIH 180
AH RTHGE IL++AI F++ RLE M+PY++G L A E++S+LEIPLP+R RIYE KYYI
Sbjct: 189 AHMRTHGEVILEKAILFSQRRLETMIPYMEGSLLAREIKSALEIPLPRRVRIYELKYYIS 10
Query: 181 AYE 189
YE
Sbjct: 9 TYE 1
Score = 79.9 bits (168), Expect = 3e-014
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -2 / +2
Query: 176 M*YFDS*ILPLLGSGISSEDLTSCAHNGPFT*GSIISRRLLANAMASSSIVSPWVLKC 3
M*YF+S*IL LLG GISS D S A+N P *G I+S+RL N+MA SSI SPWVL C
Sbjct: 14 M*YFNS*ILTLLGRGISSADFISRANNDPSM*GIIVSKRLWLNSMAFSSITSPWVLIC 187
Score = 57.9 bits (120), Expect = 1e-007
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +3 / -1
Query: 3 AFQDPWGDNTR*SHRVREKPSGDDAALRERAIVGA*SQILAGDPAA*KGQDLRVKVLH 176
A++DPW NT SH V+ K ++ L R I+G *++I DP+ *K +LRVKVLH
Sbjct: 187 AYEDPWRGNT*ESHTVQPKAFRNNDTLHGRVIIGT*NKICT*DPSP*KS*NLRVKVLH 14
Score = 48.3 bits (99), Expect = 1e-004
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = -3 / +3
Query: 187 HTHGCNTLTRRSCPF*AAGSPARI*LHAPTMALSRRAASSPDGFSRTRWLHRVLSPHGS 11
H C+TLTR+ F* GS +I H P M L R + + F T WL +VL HGS
Sbjct: 3 HR*RCSTLTRKF*LF*GEGSQVQILFHVPIMTLPCRVSLFLNAFG*TVWLSQVLPLHGS 179
Score = 42.3 bits (86), Expect(2) = 4e-005
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1 / +1
Query: 93 PFHVGQHHLQTASRERDGFIEYCLPMGPEMR 1
PFHVG H T E+ GF++Y L MGP MR
Sbjct: 97 PFHVGYHCF*TPLAEQYGFLKYYLSMGPHMR 189
Score = 37.7 bits (76), Expect = 0.16
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +2 / -3
Query: 2 RISGPMGRQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSM 181
RI GPM R Y KP S + V + PT KGH +K + RS L+ TS S TS+
Sbjct: 188 RI*GPMER*YLRKPYCSAKGV*KQ*YPTWKGHYWHVK*NLHLRSLSLEELEFTS*STTSL 9
Query: 182 RM 187
M
Sbjct: 8 PM 3
Score = 25.4 bits (49), Expect(2) = 4e-005
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +1
Query: 189 LIRMDVIL*LVDPAPFRQRDLQ 124
LI DV+L*LV+ R+RDL+
Sbjct: 1 LIGRDVVL*LVNSNSSRERDLK 66
>gb|CW426248.1|CW426248 fsbb001f137i18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137i18, DNA
sequence
Length = 707
Score = 87.7 bits (185), Expect(2) = 2e-020
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +1 / +1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ KL +ARDR+VE + W GV++E +SRAR++ +++L+DD +D +A
Sbjct: 421 RWWKDLYGNVKLNYARDRLVENYFWTCGVFHEEEYSRARMLFAKTFGLLSLMDDTYDVYA 600
Query: 466 TPQECEILTNCIESW 510
T +EC IL + I+ +
Sbjct: 601 TLEECHILNDAIQRY 645
Score = 42.3 bits (86), Expect = 0.007
Identities = 30/77 (38%), Positives = 39/77 (50%)
Frame = -2 / -1
Query: 506 LSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRA 327
L + +SI HS VA S +SS S + + N IRA E S TP + + ST SRA
Sbjct: 641 LCIASLSIWHSSNVAYTSYVSSISDSNPNVLANSIRAREYSSSWNTPHVQK*FSTSRSRA 462
Query: 326 KGSFDPICISSHHLVRI 276
SF S HHL ++
Sbjct: 461 *FSFTLP*RSFHHLQKL 411
Score = 34.1 bits (68), Expect(2) = 2e-020
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH T GE LDEAI+FAR LE +
Sbjct: 31 AHMATPGEQGLDEAISFARRHLESL 105
>gb|CN148869.1|CN148869 WOUND1_59_G08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_G08_A002 3', mRNA sequence
Length = 800
Score = 100 bits (213), Expect = 2e-020
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +1 / +2
Query: 463 ATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRED 612
ATP+ECE+L CI+SWD KGA +LP CMKFALEKILDSY+TI NMLH+E+
Sbjct: 2 ATPEECELLNKCIQSWDSKGAHELPECMKFALEKILDSYETIENMLHQEE 151
Score = 67.0 bits (140), Expect = 2e-010
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +2 / +3
Query: 473 KNVKYSLIASKAGIPKGLKTSQVA*NLL*RRYWIATRPLQICSTER 610
KNV Y + A KAGI +GL +S A*NLL R+YWIAT+PL+IC T R
Sbjct: 12 KNVNYLISAFKAGIQRGLMSSLSA*NLLWRKYWIATKPLKICFTRR 149
Score = 66.1 bits (138), Expect = 4e-010
Identities = 35/50 (70%), Positives = 37/50 (74%)
Frame = -2 / -3
Query: 611 SSRWSIFVMVW*LSNIFSRANFMQPGRS*APLGSQLSMQLVSISHSCGVA 462
SS SIF MV *LSNIFS+ANFM G S*AP SQL M L+S SHS GVA
Sbjct: 150 SSW*SIFSMVS*LSNIFSKANFMHSGSS*APFESQL*MHLLSNSHSSGVA 1
Score = 65.7 bits (137), Expect = 6e-010
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = -1 / -2
Query: 612 VLSVEHICNGLVAIQYLL*SKFHATWEVLSPFGIPAFDAISEYFTFLW 469
+L V+HI NG VAIQY L SKFHA E++SP IPA +A+ + FTF W
Sbjct: 151 LLLVKHIFNGFVAIQYFLQSKFHALRELMSPL*IPALNALIK*FTFFW 8
Score = 57.4 bits (119), Expect = 2e-007
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = -3 / -1
Query: 610 PLGGAYL*WSGSYPISSLEQISCNLGGLEPLWDPSFRCN**VFHILV 470
P G AY W SYPI S +QISC G EP +PSF C *V HIL+
Sbjct: 149 PPGEAYFQWFRSYPIFSPKQISCTQGAHEPPLNPSFECTY*VIHILL 9
Score = 53.8 bits (111), Expect = 2e-006
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +3 / +1
Query: 474 RM*NTH*LHRKLGSQRGSRPPRLHEICSREDIG*LPDHYKYAPPRG 611
RM* T *+H KLG + GS P +HEIC E+IG*L +H KYA P G
Sbjct: 13 RM*IT**VHSKLGFKGGS*AP*VHEICFGENIG*LRNH*KYASPGG 150
>gb|CN149300.1|CN149300 WOUND1_61_H11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_H11_A002 5', mRNA sequence
Length = 879
Score = 66.6 bits (139), Expect(2) = 3e-020
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +1 / +1
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLA 228
A E++S+LEI LP+R RI+ESKYYI YE +HEKVLQLA
Sbjct: 754 AREIKSALEISLPRRVRIFESKYYISTYEKDAMVHEKVLQLA 879
Score = 52.8 bits (109), Expect(2) = 3e-020
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
AH RTHGE IL+EA+ F++ RLE +LPY++G L
Sbjct: 655 AHMRTHGEIILEEAMLFSQRRLETILPYMEGSL 753
Score = 52.8 bits (109), Expect = 4e-006
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = -2 / -2
Query: 227 ASCSTFSCSVPLVSYAWM*YFDS*ILPLLGSGISSEDLTSCAHNGPFT*GSIISRRLLAN 48
ASC+TFSC++ SY M*YFDS IL LG ISS D S A++ + R L +
Sbjct: 878 ASCNTFSCTMASFSYVEM*YFDSKILTRLGREISSADFISRANDPSM*GSIVSKRLWLNS 699
Query: 47 AMASSSI 27
+SS I
Sbjct: 698 MASSSII 678
Score = 50.6 bits (104), Expect(2) = 1e-009
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -2
Query: 98 NGPFT*GSIISRRLLANAMASSSIVSPWVL 9
N P *GSI+S+RL N+MASSSI+SPWVL
Sbjct: 752 NDPSM*GSIVSKRLWLNSMASSSIISPWVL 663
Score = 34.1 bits (68), Expect(2) = 0.004
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / -1
Query: 93 PFHVGQHHLQTASRERDGFIEYCLPMGPEM 4
PFHVG + T E GF++Y L MGP M
Sbjct: 747 PFHVG*YCF*TPLAE*HGFLKYNLSMGPHM 658
Score = 32.7 bits (65), Expect(2) = 1e-009
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3 / -3
Query: 226 QVAVPSHAAFHLSHTHGCNTLTRR 155
QV SHA +HL H CNTLT++
Sbjct: 877 QVVTLSHAPWHLFHM*RCNTLTQK 806
Score = 30.9 bits (61), Expect(2) = 0.008
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2 / +2
Query: 128 RSRCLKGAGSTSQSITSMRMRQVERCMRRYCNL 226
RS L SQSITS+ M+++ CMR+ NL
Sbjct: 779 RSLSLDELEFLSQSITSLHMKKMPWCMRKCYNL 877
Score = 29.0 bits (57), Expect(2) = 0.008
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2 / +2
Query: 11 GPMGRQYSMKPSRSREAVWR*CCPT*KGH 97
GPM R Y KP S + V + PT KGH
Sbjct: 665 GPMERLYLRKPCYSAKGV*KQYYPTWKGH 751
Score = 28.6 bits (56), Expect(2) = 0.16
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3 / +3
Query: 3 AFQDPWGDNTR*SHRVREKPSGDDAALRERAI 98
+++DPW D T SH ++ K ++ L R I
Sbjct: 657 SYEDPWRDYT*GSHAIQPKAFRNNTTLHGRVI 752
Score = 26.7 bits (52), Expect(2) = 0.16
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3 / +3
Query: 96 IVGA*SQILAGDPAA*KGQDLRVKVLHPCV*DKWNAA*EGTATC 227
++ *++I D + * + VKVLH +* + + A*E TC
Sbjct: 747 VIST*NKICT*DLSP*TS*NF*VKVLHLYI*KRCHGA*ESVTTC 878
Score = 26.7 bits (52), Expect(2) = 0.004
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1 / -1
Query: 225 KLQYLLMQRSTCLIRMDVIL*LVDPAPFRQRDLQ 124
KL + LM I DVIL*L + R+RDL+
Sbjct: 876 KL*HFLMHHGIFFICRDVIL*LKNSNSSRERDLK 775
>gb|CW262232.1|CW262232 104_729_11229943_116_35207_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229943, DNA
sequence
Length = 679
Score = 84.5 bits (178), Expect(2) = 1e-018
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D++ + F+RDR+VE + W+ + YEP +S +RI+LT ++ + LLDDI+D+++
Sbjct: 410 RWWKDLRSQVDMTFSRDRLVEMYFWMTVIVYEPDYSYSRIMLTKLVLYIALLDDIYDNYS 231
Query: 466 TPQECEILTNCIESW 510
T E I T + +
Sbjct: 230 TTDESNIFTTAFKRY 186
Score = 31.3 bits (62), Expect(2) = 1e-018
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1 / -1
Query: 184 YETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRW 291
YE T + +L+ AKL+ N++Q + ELK L+ +
Sbjct: 676 YEKKATRDDTILEFAKLDYNIVQAVYCDELKQLSMY 569
>gb|CN144433.1|CN144433 WOUND1_22_E12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_22_E12_A002 3', mRNA sequence
Length = 690
Score = 93.2 bits (197), Expect = 3e-018
Identities = 34/120 (28%), Positives = 67/120 (55%)
Frame = +1 / +1
Query: 250 QLHHQQELKILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAI 429
+L HQ+E++ + RWW D+ + ++P RD++++ ++W + SR R+ +T +I++
Sbjct: 28 KLLHQKEMQEIKRWWMDLGLAQEIPVVRDQVLKWYMWSMTALQGYSFSRYRVEMTKIISL 207
Query: 430 VTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRE 609
V ++DDIFD T +E + T ++ W+ A LP M+ + + I +M +E
Sbjct: 208 VYVVDDIFDLVGTLEELSLFTEAVKMWNTAAADSLPSYMRSCYKALYTITNEIADMAEKE 387
>gb|CW329472.1|CW329472 104_826_11479863_148_35996_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479863, DNA
sequence
Length = 741
Score = 77.1 bits (162), Expect(2) = 4e-018
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / +3
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFAT 468
WW + + LPFARDR++ECF + GV EP R ++ A++ LLDDI+D + T
Sbjct: 339 WWRNADLSESLPFARDRLMECFYFATGVAPEPSLEACREVVAKTFALIVLLDDIYDIYGT 518
Query: 469 PQECEILTNCIE 504
E + T+ IE
Sbjct: 519 LDELVMFTDAIE 554
Score = 35.0 bits (70), Expect(2) = 4e-018
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1 / +1
Query: 112 VRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTR 288
V ++L +PL +++++I+ Y +L AKL+ N +Q QQEL +TR
Sbjct: 73 VDNALAVPLHWAAPRLQARWFINHYARDSDADLSLLHFAKLDFNNVQKLQQQELSRITR 249
>gb|CW073334.1|CW073334 104_334_10779333_114_31361_117 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779333, DNA
sequence
Length = 729
Score = 79.0 bits (166), Expect(2) = 9e-018
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ KLP+ARDRIVE + + G+++E +S RI+ T V ++ L+DD +D A
Sbjct: 515 RWWRNLYNDVKLPYARDRIVEPYFYACGIFHEEENSHIRIVFTKVFVLLGLMDDTYDVHA 694
Query: 466 TPQECEIL 489
T +EC++L
Sbjct: 695 TLEECQML 718
Score = 39.6 bits (80), Expect = 0.044
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = -2 / -1
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
+I HS VA S +SS T+V IR E S* P+ + ST+ SRA GSF
Sbjct: 717 NIWHSSKVAWTS*VSSIKPNNTNTLVKTIRMCEFSSS*KMPQA*KYGSTMRSRA*GSFTS 538
Query: 308 ICISSHHL 285
+ HHL
Sbjct: 537 LYRFLHHL 514
Score = 33.6 bits (67), Expect(2) = 9e-018
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +2
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH GE +LD+A+AFAR LE
Sbjct: 50 AHMAVPGEAVLDDAMAFARRHLE 118
>gb|CW082183.1|CW082183 104_423_10943238_116_32330_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943238, DNA
sequence
Length = 741
Score = 79.0 bits (166), Expect(2) = 9e-018
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ KLP+ARDRIVE + + G+++E +S RI+ T V ++ L+DD +D A
Sbjct: 206 RWWRNLYNDVKLPYARDRIVEPYFYACGIFHEEENSHIRIVFTKVFVLLGLMDDTYDVHA 27
Query: 466 TPQECEIL 489
T +EC++L
Sbjct: 26 TLEECQML 3
Score = 39.6 bits (80), Expect = 0.044
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = -2 / +1
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
+I HS VA S +SS T+V IR E S* P+ + ST+ SRA GSF
Sbjct: 4 NIWHSSKVAWTS*VSSIKPNNTNTLVKTIRMCEFSSS*KMPQA*KYGSTMRSRA*GSFTS 183
Query: 308 ICISSHHL 285
+ HHL
Sbjct: 184 LYRFLHHL 207
Score = 33.6 bits (67), Expect(2) = 9e-018
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH GE +LD+A+AFAR LE
Sbjct: 671 AHMAVPGEAVLDDAMAFARRHLE 603
>gb|CW073539.1|CW073539 104_336_10780244_114_31365_260 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780244, DNA
sequence
Length = 663
Score = 90.0 bits (190), Expect = 3e-017
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ KLP+AR+RIVE L+ GV+ E HSRARII T A ++L+DD +D+ A
Sbjct: 390 RWWRDLYNDVKLPYARNRIVETHLFSSGVFPEKEHSRARIIFTKTFAFLSLMDDTYDTHA 211
Query: 466 TPQECEILTNCIE 504
T +EC+ LT I+
Sbjct: 210 TLEECQKLTEAIQ 172
Score = 43.2 bits (88), Expect = 0.003
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = -2 / +2
Query: 506 LSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRA 327
L + VS HS VA S +SS + A +VN+IRA E S TP ++ ST+ RA
Sbjct: 170 LCIASVSFWHSSKVA*VS*VSSIRLKNANVLVNMIRARECSFSGNTPLENKCVSTMRFRA 349
Query: 326 KGSFDPICISSHHL 285
GSF + S HHL
Sbjct: 350 *GSFTSL*RSLHHL 391
>gb|CW440572.1|CW440572 fsbb001f159e18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f159e18, DNA
sequence
Length = 624
Score = 89.0 bits (188), Expect = 6e-017
Identities = 31/75 (41%), Positives = 52/75 (69%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ +KL +ARDR+VE + W GV++E +SRAR++ +++L+DD +D +A
Sbjct: 508 RWWKDLYGNAKLNYARDRLVENYFWTCGVFHEEEYSRARMLFAKTFGLLSLMDDTYDVYA 329
Query: 466 TPQECEILTNCIESW 510
T +EC IL + I+ +
Sbjct: 328 TLEECHILNDAIQRY 284
Score = 41.8 bits (85), Expect = 0.009
Identities = 30/77 (38%), Positives = 39/77 (50%)
Frame = -2 / +3
Query: 506 LSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRA 327
L + +SI HS VA S +SS S + + N IRA E S TP + + ST SRA
Sbjct: 288 LCIASLSIWHSSNVAYTSYVSSISDSNPNVLANSIRAREYSSSWNTPHVQK*FSTSRSRA 467
Query: 326 KGSFDPICISSHHLVRI 276
SF S HHL ++
Sbjct: 468 *FSFALP*RSFHHLQKL 518
>gb|CW350447.1|CW350447 fsbb001f011m06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f011m06, DNA
sequence
Length = 610
Score = 88.6 bits (187), Expect = 8e-017
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ +L ++RDR+VEC+LW Y+E H+RAR+IL +IA++ L DD +D A
Sbjct: 568 RWWKDLYNEGELTYSRDRVVECYLWSYTAYFEKEHTRARMILAKIIALIILTDDTYDVRA 389
Query: 466 TPQECEILTNCIE 504
T +EC I+
Sbjct: 388 TLEECRKFNEAIQ 350
>gb|CW440487.1|CW440487 fsbb001f159c20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f159c20, DNA
sequence
Length = 780
Score = 87.7 bits (185), Expect = 1e-016
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ KL +ARDR+VE + W GV++E +SRAR++ +++L+DD +D +A
Sbjct: 536 RWWKDLYGNVKLNYARDRLVENYFWTCGVFHEEEYSRARMLFAKTFGLLSLMDDTYDVYA 357
Query: 466 TPQECEILTNCIESW 510
T +EC IL + I+ +
Sbjct: 356 TLEECHILNDAIQRY 312
Score = 42.3 bits (86), Expect = 0.007
Identities = 30/77 (38%), Positives = 39/77 (50%)
Frame = -2 / +1
Query: 506 LSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRA 327
L + +SI HS VA S +SS S + + N IRA E S TP + + ST SRA
Sbjct: 316 LCIASLSIWHSSNVAYTSYVSSISDSNPNVLANSIRAREYSSSWNTPHVQK*FSTSRSRA 495
Query: 326 KGSFDPICISSHHLVRI 276
SF S HHL ++
Sbjct: 496 *FSFTLP*RSFHHLQKL 546
>gb|CW350446.1|CW350446 fsbb001f011m06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f011m06, DNA
sequence
Length = 705
Score = 87.2 bits (184), Expect = 2e-016
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1 / +1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ +L ++RDR+VEC+LW Y+E H+RAR+IL +IA++ L DD +D A
Sbjct: 391 RWWKDLYNEGELTYSRDRVVECYLWSYTAYFEKEHTRARMILAKIIALIILTDDTYDVRA 570
Query: 466 TPQEC 480
T +EC
Sbjct: 571 TLEEC 585
>gb|CN148951.1|CN148951 WOUND1_59_G08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_G08_A002 5', mRNA sequence
Length = 872
Score = 52.8 bits (109), Expect(2) = 4e-016
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1 / +2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
AH RTHGE IL+EA+ F++ RLE +LPY++G L
Sbjct: 668 AHMRTHGEIILEEAMLFSQRRLETILPYMEGSL 766
Score = 52.4 bits (108), Expect(2) = 4e-016
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1 / +2
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLH 207
A E++S+LEI LP+R RI+ESKYYI YE +H
Sbjct: 767 AREIKSALEISLPRRVRIFESKYYISTYEKDAMVH 871
Score = 50.6 bits (104), Expect(2) = 3e-008
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -3
Query: 98 NGPFT*GSIISRRLLANAMASSSIVSPWVL 9
N P *GSI+S+RL N+MASSSI+SPWVL
Sbjct: 765 NDPSM*GSIVSKRLWLNSMASSSIISPWVL 676
Score = 37.7 bits (76), Expect = 0.16
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -2 / -3
Query: 206 CSVPLVSYAWM*YFDS*ILPLLGSGISSEDLTSCAHNGPFT*GSIISRRLLANAMASSSI 27
C++ SY M*YFDS IL LG ISS D S A++ + R L + +SS I
Sbjct: 870 CTMASFSYVEM*YFDSKILTRLGREISSADFISRANDPSM*GSIVSKRLWLNSMASSSII 691
Score = 34.1 bits (68), Expect(2) = 0.44
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / -2
Query: 93 PFHVGQHHLQTASRERDGFIEYCLPMGPEM 4
PFHVG + T E GF++Y L MGP M
Sbjct: 760 PFHVG*YCF*TPLAE*HGFLKYNLSMGPHM 671
Score = 29.0 bits (57), Expect(2) = 0.39
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2 / +3
Query: 11 GPMGRQYSMKPSRSREAVWR*CCPT*KGH 97
GPM R Y KP S + V + PT KGH
Sbjct: 678 GPMERLYLRKPCYSAKGV*KQYYPTWKGH 764
Score = 28.1 bits (55), Expect(2) = 3e-008
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 208 HAAFHLSHTHGCNTLTRR 155
HA +HL H CNTLT++
Sbjct: 872 HAPWHLFHM*RCNTLTQK 819
Score = 24.9 bits (48), Expect(2) = 0.39
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +3
Query: 128 RSRCLKGAGSTSQSITSMRMRQVERCM 208
RS L SQSITS+ M+++ CM
Sbjct: 792 RSLSLDELEFLSQSITSLHMKKMPWCM 872
Score = 21.7 bits (41), Expect(2) = 0.44
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1 / -2
Query: 207 MQRSTCLIRMDVIL*LVDPAPFRQRDLQ 124
M I DVIL*L + R+RDL+
Sbjct: 871 MHHGIFFICRDVIL*LKNSNSSRERDLK 788
>gb|CW203947.1|CW203947 104_631_11186282_116_37095_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186282, DNA
sequence
Length = 655
Score = 85.4 bits (180), Expect = 7e-016
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ +L + RDR+VECF W VYYE H RAR +LT + A++T++DD FD A
Sbjct: 35 RWWKDIYQEVELNYMRDRVVECFFWSYTVYYEQDHLRARAMLTKIFALLTVVDDTFDDHA 214
Query: 466 TPQECEILTNCI 501
T E L +
Sbjct: 215 TLDESRKLAEAL 250
Score = 44.1 bits (90), Expect = 0.002
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = -2 / -2
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
S+ S VA S +SS +V A +V+I RA +* S*YT +KHST SR S
Sbjct: 237 SLRDSSKVA*SSNVSSTTVRSAKILVSIARARK*SCS*YTV*DQKKHSTTRSRM*FSSTS 58
Query: 308 ICISSHHL 285
IS HHL
Sbjct: 57 W*ISFHHL 34
>gb|CW476798.1|CW476798 fsbb001f233n01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233n01, DNA
sequence
Length = 706
Score = 85.4 bits (180), Expect = 7e-016
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ +L + RDR+VECF W VYYE H RAR +LT + A++T++DD FD A
Sbjct: 389 RWWKDIYQEVELNYMRDRVVECFFWSYTVYYEQDHLRARAMLTKIFALLTVVDDTFDDHA 568
Query: 466 TPQECEILTNCI 501
T E L +
Sbjct: 569 TLDESRKLAEAL 604
Score = 44.1 bits (90), Expect = 0.002
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = -2 / -2
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
S+ S VA S +SS +V A +V+I RA +* S*YT +KHST SR S
Sbjct: 591 SLRDSSKVA*SSNVSSTTVRSAKILVSIARARK*SCS*YTV*DQKKHSTTRSRM*FSSTS 412
Query: 308 ICISSHHL 285
IS HHL
Sbjct: 411 W*ISFHHL 388
>gb|CW426249.1|CW426249 fsbb001f137i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137i18, DNA
sequence
Length = 702
Score = 84.9 bits (179), Expect = 1e-015
Identities = 30/75 (40%), Positives = 50/75 (66%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D+ KL +ARDR+VE + W G+++E +SRAR++ ++L+DD +D +A
Sbjct: 538 RWWKDLYGNVKLNYARDRLVENYFWTRGLFHEEEYSRARMLFAKTFGFLSLMDDTYDVYA 359
Query: 466 TPQECEILTNCIESW 510
T +EC IL + I+ +
Sbjct: 358 TLEECHILNDAIQRY 314
Score = 40.5 bits (82), Expect = 0.024
Identities = 29/77 (37%), Positives = 39/77 (50%)
Frame = -2 / +3
Query: 506 LSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRA 327
L + +SI HS VA S +SS S + N IRA E S +P++ + ST SRA
Sbjct: 318 LCIASLSIWHSSNVAYTSYVSSISDRNPNVLANSIRAREYSSSWNSPRVQK*FSTNRSRA 497
Query: 326 KGSFDPICISSHHLVRI 276
SF S HHL ++
Sbjct: 498 *FSFTLP*RSFHHLQKL 548
>gb|CW038499.1|CW038499 104_270_10504959_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504959, DNA
sequence
Length = 533
Score = 67.5 bits (141), Expect(2) = 3e-015
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +1 / -2
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFD 456
WW + + LPFARDR++ECF + GV EP R ++ A++ LLDDI+D
Sbjct: 169 WWRNADLSESLPFARDRLMECFYFATGVAPEPSLEACREVVAKTFALIVLLDDIYD 2
Score = 35.0 bits (70), Expect(2) = 3e-015
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1 / -3
Query: 112 VRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTR 288
V ++L +PL +++++I+ Y +L AKL+ N +Q QQEL +TR
Sbjct: 435 VDNALAVPLHWAAPRLQARWFINHYARDSDADLSLLHFAKLDFNNVQKLQQQELSRITR 259
>gb|BZ333570.1|BZ333570 hx71a12.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx71a12 5', DNA sequence
Length = 585
Score = 51.5 bits (106), Expect(2) = 4e-015
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAY 186
A E++S+LEIPLP+R RIYE KYYI AY
Sbjct: 501 AREIKSALEIPLPRRVRIYEFKYYISAY 584
Score = 50.6 bits (104), Expect(2) = 4e-015
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1 / +3
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
AH RTHG+ IL+EAI +++ RL+ M+PY++G L
Sbjct: 402 AHMRTHGDIILNEAILYSQRRLDTMIPYMEGSL 500
Score = 37.7 bits (76), Expect(2) = 3e-005
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2 / -3
Query: 185 YAWM*YFDS*ILPLLGSGISSEDLTSCAHN 96
YA M*Y +S*IL LLG GISS D S A++
Sbjct: 583 YAEM*YLNS*ILTLLGRGISSADFISRAND 494
Score = 30.4 bits (60), Expect(2) = 3e-005
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / -2
Query: 90 FHVGQHHLQTASRERDGFIEYCLPMGPEMR 1
FHVG H + T + F++Y + M P MR
Sbjct: 491 FHVGYHCV*TPLAVQYSFVKYYISMSPHMR 402
>gb|CB926745.1|CB926745 ABA1_10_F12.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_10_F12_A012 3', mRNA sequence
Length = 728
Score = 82.6 bits (174), Expect = 5e-015
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +1 / +2
Query: 475 ECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRED 612
ECE+ T C+ESWD A DLP CMKF LEKI DSY TI NMLH+E+
Sbjct: 2 ECELFTKCMESWDSMEAHDLPECMKFGLEKIFDSYGTIENMLHQEE 139
Score = 68.0 bits (142), Expect = 1e-010
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = -2 / -3
Query: 611 SSRWSIFVMVW*LSNIFSRANFMQPGRS*APLGSQLSMQLVSISHS 474
SS WSIF MV *LSNIFS+ NFM GRS*A + SQLSM LV+ SHS
Sbjct: 138 SSWWSIFSMVP*LSNIFSKPNFMHSGRS*ASIESQLSMHLVNNSHS 1
Score = 63.4 bits (132), Expect = 3e-009
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 612 VLSVEHICNGLVAIQYLL*SKFHATWEVLSPFGIPAFDAISEYFTF 475
+L VEHI NG +A++Y L*+KFHA W+V+S IPAF A+ + FTF
Sbjct: 139 LLLVEHIFNGPIAVEYFL*TKFHALWKVMSLH*IPAFHALGK*FTF 2
Score = 56.5 bits (117), Expect = 3e-007
Identities = 26/45 (57%), Positives = 28/45 (62%)
Frame = -3 / -1
Query: 610 PLGGAYL*WSGSYPISSLEQISCNLGGLEPLWDPSFRCN**VFHI 476
P GGAY WS S I SL QISC L G EP +PSF C *+ HI
Sbjct: 137 PPGGAYFQWSHSCRIFSLNQISCTLEGHEPPLNPSFPCTW*IIHI 3
Score = 51.9 bits (107), Expect = 8e-006
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = +3 / +1
Query: 474 RM*NTH*LHRKLGSQRGSRPPRLHEICSREDIG*LPDHYKYAPPRG 611
RM* + +H KLG GS P R+HEI RE+I L DH KYAPP G
Sbjct: 1 RM*IIYQVHGKLGFNGGS*PSRVHEIWFRENIRQLWDH*KYAPPGG 138
Score = 48.7 bits (100), Expect = 8e-005
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +2 / +3
Query: 476 NVKYSLIASKAGIPKGLKTSQVA*NLL*RRYWIATRPLQICSTER 610
NV Y A KAGI L T Q A*NL+*R+Y A PL+ICST R
Sbjct: 3 NVNYLPSAWKAGIQWRLMTFQSA*NLV*RKYSTAMGPLKICSTRR 137
>gb|CW022741.1|CW022741 104_162_10432029_1_30008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432029, DNA
sequence
Length = 595
Score = 82.2 bits (173), Expect = 7e-015
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+++ L + RDRIVEC+ W V+YE ++RAR+IL + + +LLDD +D A
Sbjct: 297 RWWKELSGEIGLDYVRDRIVECYFWSYTVHYEQENARARMILARLFLLTSLLDDTYDVHA 476
Query: 466 TPQECEILTNCIESW 510
T +E L IE W
Sbjct: 477 TLEEARELNKAIERW 521
>gb|CW073335.1|CW073335 104_334_10779333_116_31362_117 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779333, DNA
sequence
Length = 687
Score = 82.2 bits (173), Expect = 7e-015
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ KLP+ARDRIVE + + G+++E +S RI+ T V ++ L+DD +D A
Sbjct: 406 RWWRNLYNDVKLPYARDRIVEPYFYACGIFHEEENSHIRIVFTKVFVLLGLMDDTYDVHA 227
Query: 466 TPQECEILTNCIESW 510
T +EC++L I+ +
Sbjct: 226 TLEECQMLNEAIQRY 182
Score = 39.6 bits (80), Expect = 0.044
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = -2 / +3
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
+I HS VA S +SS T+V IR E S* P+ + ST+ SRA GSF
Sbjct: 204 NIWHSSKVAWTS*VSSIKPNNTNTLVKTIRMCEFSSS*KMPQA*KYGSTMRSRA*GSFTS 383
Query: 308 ICISSHHL 285
+ HHL
Sbjct: 384 LYRFLHHL 407
>gb|CW130950.1|CW130950 104_513_11115399_148_34778_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115399, DNA
sequence
Length = 701
Score = 82.2 bits (173), Expect = 7e-015
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+++ L + RDRIVEC+ W V+YE ++RAR+IL + + +LLDD +D A
Sbjct: 395 RWWKELSGEIGLDYVRDRIVECYFWSYTVHYEQENARARMILARLFLLTSLLDDTYDVHA 574
Query: 466 TPQECEILTNCIESW 510
T +E L IE W
Sbjct: 575 TLEEARELNKAIERW 619
>gb|CW288118.1|CW288118 104_766_11411781_116_35529_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411781, DNA
sequence
Length = 675
Score = 82.2 bits (173), Expect = 7e-015
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ KLP+ARDRIVE + + G+++E +S RI+ T V ++ L+DD +D A
Sbjct: 318 RWWRNLYNDVKLPYARDRIVEPYFYACGIFHEEENSHIRIVFTKVFVLLGLMDDTYDVHA 139
Query: 466 TPQECEILTNCIESW 510
T +EC++L I+ +
Sbjct: 138 TLEECQMLNEAIQRY 94
Score = 39.6 bits (80), Expect = 0.044
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = -2 / +2
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
+I HS VA S +SS T+V IR E S* P+ + ST+ SRA GSF
Sbjct: 116 NIWHSSKVAWTS*VSSIKPNNTNTLVKTIRMCEFSSS*KMPQA*KYGSTMRSRA*GSFTS 295
Query: 308 ICISSHHL 285
+ HHL
Sbjct: 296 LYRFLHHL 319
>gb|CW037130.1|CW037130 104_268_10504162_115_30382 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504162, DNA
sequence
Length = 655
Score = 77.1 bits (162), Expect(2) = 1e-014
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / +3
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFAT 468
WW + + LPFARDR++ECF + GV EP R ++ A++ LLDDI+D + T
Sbjct: 156 WWRNADLSESLPFARDRLMECFYFATGVAPEPSLEACREVVAKTFALIVLLDDIYDIYGT 335
Query: 469 PQECEILTNCIE 504
E + T+ IE
Sbjct: 336 LDELVMFTDAIE 371
Score = 23.1 bits (44), Expect(2) = 1e-014
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1 / +1
Query: 226 AKLNSNVLQLHHQQELKILTR 288
AKL+ N +Q QQEL +TR
Sbjct: 4 AKLDFNNVQKLQQQELSRITR 66
>gb|CW160136.1|CW160136 104_566_11149723_148_36427_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149723, DNA
sequence
Length = 678
Score = 59.3 bits (123), Expect(2) = 2e-014
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +1 / -1
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
A EV SL+ PL +R RI E++ YI YE + +E +L+ AKLN N+LQ+ + +ELK +
Sbjct: 303 ADEVSLSLQTPLFRRVRILETRNYIPIYEMEPSRNEAMLEFAKLNFNLLQILYCEELKTV 124
Query: 283 T 285
T
Sbjct: 123 T 121
Score = 40.5 bits (82), Expect(2) = 2e-014
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1 / -1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RTHGE +LDEAI F R LE L ++ L
Sbjct: 402 AYLRTHGEEVLDEAIIFTRRHLEAALTSLESKL 304
>gb|CW288119.1|CW288119 104_766_11411781_148_35533_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411781, DNA
sequence
Length = 700
Score = 79.0 bits (166), Expect = 6e-014
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ KLP+ARDRIVE + + G+++E +S RI+ T V ++ L+DD +D A
Sbjct: 416 RWWRNLYNDVKLPYARDRIVEPYFYACGIFHEEENSHIRIVFTKVFVLLGLMDDTYDVHA 595
Query: 466 TPQECEILTNCIESW 510
T +EC+ + I+ +
Sbjct: 596 TLEECQNVNEAIQRY 640
Score = 38.6 bits (78), Expect = 0.084
Identities = 26/65 (40%), Positives = 32/65 (49%)
Frame = -2 / -2
Query: 479 HSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICI 300
HS VA S +SS T+V IR E S* P+ + ST+ SRA GSF +
Sbjct: 609 HSSKVAWTS*VSSIKPNNTNTLVKTIRMCEFSSS*KMPQA*KYGSTMRSRA*GSFTSLYR 430
Query: 299 SSHHL 285
HHL
Sbjct: 429 FLHHL 415
>gb|CW370505.1|CW370505 fsbb001f045h16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f045h16, DNA
sequence
Length = 429
Score = 78.0 bits (164), Expect = 1e-013
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1 / -2
Query: 271 LKILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDI 450
L IL RWW D+ LP+ RDRIVE + W GV + HSRAR+I T ++A+ +L+DD
Sbjct: 218 LIIL*RWWRDLYKEVNLPYTRDRIVEMYFWAFGVSHAEEHSRARMIHTKIVALTSLMDDT 39
Query: 451 FDSFAT 468
+D A+
Sbjct: 38 YDVHAS 21
Score = 39.6 bits (80), Expect = 0.044
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = -2 / +1
Query: 467 VAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICISSHH 288
+A S +SS + A +V IIRA E + TPK + ST+ SR G F + S HH
Sbjct: 22 LAWTS*VSSIRLVRATILV*IIRARECSSAWDTPKAQKYISTMRSRV*GRFTSLYRSLHH 201
Query: 287 LVRIFSS 267
L +I ++
Sbjct: 202 LHKIINN 222
>gb|CW322613.1|CW322613 104_816_11476190_148_35951_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476190, DNA
sequence
Length = 677
Score = 77.1 bits (162), Expect = 2e-013
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / -1
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFAT 468
WW + + LPFARDR++ECF + GV EP R ++ A++ LLDDI+D + T
Sbjct: 623 WWRNADLSESLPFARDRLMECFYFATGVAPEPSLEACREVVAKTFALIVLLDDIYDIYGT 444
Query: 469 PQECEILTNCIE 504
E + T+ IE
Sbjct: 443 LDELVMFTDAIE 408
>gb|CN145119.1|CN145119 WOUND1_26_H08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_H08_A002 5', mRNA sequence
Length = 823
Score = 76.2 bits (160), Expect = 4e-013
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPLWAHEVRSSLEIPLPKRGRIYESKYYIH 180
AH RTHGE ILD I F +SRL+ +L P EV+ SLE P +R + E++ YI
Sbjct: 556 AHLRTHGEDILDNIITFNKSRLQSLLLGNLEPQLQEEVQCSLETPRFRRVKRVEARRYIS 735
Query: 181 AYETSGTLHEKVLQLAKLNSNVLQ 252
YE T +L+ AKL+ N+LQ
Sbjct: 736 LYEKKATRDGTILEFAKLDYNILQ 807
Score = 41.8 bits (85), Expect = 0.009
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = -2 / -3
Query: 254 SCRTLEFSLASCSTFSCSVPLVSYAWM*YFDS*ILPLLGSGISSEDLTSCAHNGPFT*GS 75
+C+ L S A+ S V SY+ M* S +L L G+S TS G S
Sbjct: 809 ACKML*SSFANSSMVPSRVAFFSYSEM*RLASTLLTRLNRGVSKLHWTSSCSCGSKFPSS 630
Query: 74 IISRRLLANAMASSSIVSPWVLKC 3
RRLL + SS+ SP VL+C
Sbjct: 629 RDWRRLLLKVIMLSSMSSP*VLRC 558
Score = 37.7 bits (76), Expect = 0.16
Identities = 28/78 (35%), Positives = 31/78 (39%)
Frame = +2 / +2
Query: 17 MGRQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMRQV 196
MGR Y S S A C H R KS WR G+ Q TS MR+
Sbjct: 572 MGRTYLTTLSLSTRAASSLYCWEIWSHSYRRKSSAVWRHLGSGGSREWRQGATSHYMRKR 751
Query: 197 ERCMRRYCNLPS*TPTFC 250
M Y NL +*T T C
Sbjct: 752 LHGMGPYWNLQN*TTTSC 805
Score = 35.9 bits (72), Expect = 0.56
Identities = 27/75 (36%), Positives = 33/75 (44%)
Frame = -1 / -2
Query: 225 KLQYLLMQRSTCLIRMDVIL*LVDPAPFRQRDLQRGSDFMRPQWPFHVGQHHLQTASRER 46
K QY + S LI DV L P R LQ DF+ W Q L+ A E
Sbjct: 780 KFQYGPIPCSLFLI**DVAPCLHSLDPPEPRCLQTALDFLL*LWLQISQQ*RLEAALVES 601
Query: 45 DGFIEYCLPMGPEMR 1
D ++Y LPM +MR
Sbjct: 600 DNVVKYVLPMSSQMR 556
>gb|CW372025.1|CW372025 fsbb001f047l22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047l22, DNA
sequence
Length = 730
Score = 75.8 bits (159), Expect = 6e-013
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D L ++ DR VE + W GV+ +SRARII + ++A+++L+DD FD+ A
Sbjct: 273 RWWKDFYKNVNLTYSLDRGVEMYFWGFGVFPGEGNSRARIIFSKIVALISLMDDTFDTHA 452
Query: 466 TPQECEILTNCIE 504
T ++C+ L I+
Sbjct: 453 TFEDCKNLDEAIQ 491
>gb|CW422122.1|CW422122 fsbb001f131e02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f131e02, DNA
sequence
Length = 747
Score = 75.8 bits (159), Expect = 6e-013
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D L ++ DR VE + W GV+ +SRARII + ++A+++L+DD FD+ A
Sbjct: 350 RWWKDFYKNVNLTYSLDRGVEMYFWGFGVFPGEGNSRARIIFSKIVALISLMDDTFDTHA 529
Query: 466 TPQECEILTNCIE 504
T ++C+ L I+
Sbjct: 530 TFEDCKNLDEAIQ 568
>gb|CW327174.1|CW327174 104_822_11478606_148_35965_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478606, DNA
sequence
Length = 710
Score = 58.8 bits (122), Expect(2) = 1e-012
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1 / -3
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLD 444
WW + + LPFARDR++ECF + GV EP R ++ A++ LLD
Sbjct: 156 WWRNADLSESLPFARDRLMECFYFATGVAPEPSLEACREVVAKTFALIVLLD 1
Score = 35.0 bits (70), Expect(2) = 1e-012
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1 / -1
Query: 112 VRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTR 288
V ++L +PL +++++I+ Y +L AKL+ N +Q QQEL +TR
Sbjct: 422 VDNALAVPLHWAAPRLQARWFINHYARDSDADLSLLHFAKLDFNNVQKLQQQELSRITR 246
>gb|CW242855.1|CW242855 104_702_11219565_116_37563_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219565, DNA
sequence
Length = 617
Score = 74.8 bits (157), Expect = 1e-012
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW+D L ++ DR VE + W GV+ +SRARII + ++A+++L+DD FD+ A
Sbjct: 387 RWWKDFYKNVNLTYSLDRGVEMYFWGFGVFPGEGNSRARIIFSKIVALISLMDDTFDTHA 566
Query: 466 TPQECEILTNCI 501
T ++C+ L I
Sbjct: 567 TFEDCKNLDEAI 602
>gb|BZ422372.1|BZ422372 id52h06.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id52h06 5', DNA sequence
Length = 678
Score = 74.4 bits (156), Expect = 1e-012
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +1 / -3
Query: 499 IESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRED 612
+ SWD KGA +LP CMKFALEKILDSY+TI NMLH+E+
Sbjct: 613 MSSWDSKGAHELPECMKFALEKILDSYETIENMLHQEE 500
Score = 55.1 bits (114), Expect = 9e-007
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2 / -1
Query: 494 IASKAGIPKGLKTSQVA*NLL*RRYWIATRPLQICSTER 610
++ AGI +GL +S A*NLL R+YWIAT+PL+IC T R
Sbjct: 618 LSCPAGIQRGLMSSLSA*NLLWRKYWIATKPLKICFTRR 502
Score = 52.4 bits (108), Expect = 6e-006
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -2 / +3
Query: 611 SSRWSIFVMVW*LSNIFSRANFMQPGRS*APLGSQLSMQL 492
SS SIF MV *LSNIFS+ANFM G S*AP SQL M +
Sbjct: 501 SSW*SIFSMVS*LSNIFSKANFMHSGSS*APFESQLDMTI 620
Score = 51.9 bits (107), Expect = 8e-006
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = -1 / +2
Query: 612 VLSVEHICNGLVAIQYLL*SKFHATWEVLSPFGIPA 505
+L V+HI NG VAIQY L SKFHA E++SP IPA
Sbjct: 500 LLLVKHIFNGFVAIQYFLQSKFHALRELMSPL*IPA 607
Score = 46.0 bits (94), Expect = 5e-004
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3 / -2
Query: 498 HRKLGSQRGSRPPRLHEICSREDIG*LPDHYKYAPPRG 611
H +LG + GS P +HEIC E+IG*L +H KYA P G
Sbjct: 614 HVQLGFKGGS*AP*VHEICFGENIG*LRNH*KYASPGG 501
Score = 42.8 bits (87), Expect = 0.005
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -3 / +1
Query: 610 PLGGAYL*WSGSYPISSLEQISCNLGGLEPLWDPSF 503
P G AY W SYPI S +QISC G EP +PS+
Sbjct: 502 PPGEAYFQWFRSYPIFSPKQISCTQGAHEPPLNPSW 609
>gb|BZ423750.1|BZ423750 id52h06.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id52h06 5', DNA sequence
Length = 744
Score = 74.4 bits (156), Expect = 1e-012
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +1 / +1
Query: 499 IESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHRED 612
+ SWD KGA +LP CMKFALEKILDSY+TI NMLH+E+
Sbjct: 367 MSSWDSKGAHELPECMKFALEKILDSYETIENMLHQEE 480
Score = 55.1 bits (114), Expect = 9e-007
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2 / +2
Query: 494 IASKAGIPKGLKTSQVA*NLL*RRYWIATRPLQICSTER 610
++ AGI +GL +S A*NLL R+YWIAT+PL+IC T R
Sbjct: 362 LSCPAGIQRGLMSSLSA*NLLWRKYWIATKPLKICFTRR 478
Score = 52.4 bits (108), Expect = 6e-006
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -2 / -2
Query: 611 SSRWSIFVMVW*LSNIFSRANFMQPGRS*APLGSQLSMQL 492
SS SIF MV *LSNIFS+ANFM G S*AP SQL M +
Sbjct: 479 SSW*SIFSMVS*LSNIFSKANFMHSGSS*APFESQLDMTI 360
Score = 51.9 bits (107), Expect = 8e-006
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = -1 / -1
Query: 612 VLSVEHICNGLVAIQYLL*SKFHATWEVLSPFGIPA 505
+L V+HI NG VAIQY L SKFHA E++SP IPA
Sbjct: 480 LLLVKHIFNGFVAIQYFLQSKFHALRELMSPL*IPA 373
Score = 46.0 bits (94), Expect = 5e-004
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 498 HRKLGSQRGSRPPRLHEICSREDIG*LPDHYKYAPPRG 611
H +LG + GS P +HEIC E+IG*L +H KYA P G
Sbjct: 366 HVQLGFKGGS*AP*VHEICFGENIG*LRNH*KYASPGG 479
Score = 42.8 bits (87), Expect = 0.005
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -3 / -3
Query: 610 PLGGAYL*WSGSYPISSLEQISCNLGGLEPLWDPSF 503
P G AY W SYPI S +QISC G EP +PS+
Sbjct: 478 PPGEAYFQWFRSYPIFSPKQISCTQGAHEPPLNPSW 371
>gb|CW115463.1|CW115463 104_490_11106573_148_34588_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106573, DNA
sequence
Length = 243
Score = 73.5 bits (154), Expect = 3e-012
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +1 / +2
Query: 271 LKILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDD 447
L IL RWW D+ LP+ RDRIVE + W GV + HSRAR+I T ++A+ +L+DD
Sbjct: 62 LIIL*RWWRDLYKEVNLPYTRDRIVEMYFWAFGVSHAEEHSRARMIHTKIVALTSLMDD 238
Score = 39.1 bits (79), Expect = 0.061
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = -2 / -1
Query: 449 ISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDPICISSHHLVRIFS 270
+SS + A +V IIRA E + TPK + ST+ SR G F + S HHL +I +
Sbjct: 240 VSSIRLVRATILV*IIRARECSSAWDTPKAQKYISTMRSRV*GRFTSLYRSLHHLHKIIN 61
Query: 269 S 267
+
Sbjct: 60 N 58
>gb|CW329471.1|CW329471 104_826_11479863_116_35995_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479863, DNA
sequence
Length = 741
Score = 73.5 bits (154), Expect = 3e-012
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = +1 / -2
Query: 289 WWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFAT 468
WW + + LP ARDR++ECF + GV EP R ++ A++ LLDDI+D + T
Sbjct: 614 WWRNADLSESLPSARDRLMECFYFATGVAPEPSLEACREVVAKTFALIVLLDDIYDIYGT 435
Query: 469 PQECEILTNCIE 504
E + T+ IE
Sbjct: 434 LDELVMFTDAIE 399
>gb|CW373474.1|CW373474 fsbb001f049n24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f049n24, DNA
sequence
Length = 611
Score = 65.7 bits (137), Expect(2) = 9e-012
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFD 456
RWW+++ L + RDRIVEC+ W V+YE ++RAR+IL + + +LL D +D
Sbjct: 441 RWWKELSGEIGLDYVRDRIVECYFWSYTVHYEQKNARARMILARLFLLTSLLHDTYD 611
Score = 26.3 bits (51), Expect(2) = 9e-012
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 226 AKLNSNVLQLHHQQELKILTR 288
AKL+ N+LQ HQ+ELK +++
Sbjct: 3 AKLDFNLLQHLHQKELKEISQ 65
>gb|CW096545.1|CW096545 104_462_11001954_116_34349_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001954, DNA
sequence
Length = 685
Score = 71.6 bits (150), Expect = 1e-011
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +1 / -3
Query: 316 KLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTN 495
KLP+ARDRIVE + + G+++E +S RI+ T V ++ L+DD +D AT +EC++L
Sbjct: 638 KLPYARDRIVEPYFYACGIFHEEENSHIRIVFTKVFVLLGLMDDTYDVHATLEECQMLNE 459
Query: 496 CIESW 510
I+ +
Sbjct: 458 AIQRY 444
Score = 35.0 bits (70), Expect = 1.1
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = -2 / +1
Query: 488 SISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRAKGSFDP 309
+I HS VA S +SS T+V IR E S* P+ + ST+ SRA GSF
Sbjct: 466 NIWHSSKVAWTS*VSSIKPNNTNTLVKTIRMCEFSSS*KMPQA*KYGSTMRSRA*GSFTS 645
Query: 308 ICISSHHL 285
+ HL
Sbjct: 646 LYRFLPHL 669
>gb|CN145031.1|CN145031 WOUND1_26_H08.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_H08_A002 3', mRNA sequence
Length = 758
Score = 71.6 bits (150), Expect = 1e-011
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +1 / +3
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FARDR+VE W+LGV YEP +S +RI++T I +LLDD++D+++T E T ++
Sbjct: 3 FARDRMVELHFWMLGVVYEPYYSYSRIMMTKFIVFASLLDDLYDNYSTTMESNTFTMAMQ 182
Score = 36.3 bits (73), Expect = 0.41
Identities = 27/61 (44%), Positives = 31/61 (50%)
Frame = -2 / -2
Query: 506 LSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILSRA 327
L M +V + S V S SS + V II E* GS* TP I + STILSRA
Sbjct: 184 LCMAMVKVLLSIVVL*LS*RSSSKDANTMNFVIIILEYE**GS*TTPSIQKCSSTILSRA 5
Query: 326 K 324
K
Sbjct: 4 K 2
>gb|BM329343.1|BM329343 PIC1_36_E06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 318
Score = 71.2 bits (149), Expect = 1e-011
Identities = 27/85 (31%), Positives = 53/85 (62%)
Frame = +1 / +1
Query: 214 VLQLAKLNSNVLQLHHQQELKILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHS 393
V +LA ++ +L HQ+E++ + RWW D+ + ++P RD++++ ++W + S
Sbjct: 43 VEKLAIAEFHLNKLLHQKEMQEIKRWWMDLGLAQEIPVVRDQVLKWYMWSMTALQGYSFS 222
Query: 394 RARIILTMVIAIVTLLDDIFDSFAT 468
R R+ +T +I++V ++DDIFD T
Sbjct: 223 RYRVEMTKIISLVHVVDDIFDLVGT 297
>gb|CW033966.1|CW033966 104_263_10502267_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502267, DNA
sequence
Length = 534
Score = 69.8 bits (146), Expect = 3e-011
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +1 / +3
Query: 319 LPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNC 498
LP+ RDRIVE + W GV + HSRAR+I T ++A+ +L+DD +D A+ +EC+ +
Sbjct: 21 LPYTRDRIVEMYFWAFGVSHAEEHSRARMIHTKIVALTSLMDDTYDVHASFEECKKVNEA 200
Query: 499 IE 504
++
Sbjct: 201 MQ 206
Score = 34.5 bits (69), Expect = 1.5
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = -2 / -3
Query: 512 SQLSMQLVSISHSCGVAKESKISSKSVTMAITIVNIIRALE*HGS*YTPKIHRKHSTILS 333
S L + + HS +A S +SS + A +V IIRA E + TPK + ST+ S
Sbjct: 214 SYLCIASFTFLHSSKLAWTS*VSSIRLVRATILV*IIRARECSSAWDTPKAQKYISTMRS 35
Query: 332 RAKGSF 315
R G F
Sbjct: 34 RV*GRF 17
>gb|CW313624.1|CW313624 104_804_11471382_116_35793_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471382, DNA
sequence
Length = 725
Score = 57.0 bits (118), Expect(2) = 4e-011
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +1 / -3
Query: 100 WAHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKI 279
+A EV SSL PL +R I E++ YI YE T +E +L+ AKLN N+ QL +ELK
Sbjct: 234 FAKEVSSSLHTPLFRRVGILEARNYIPIYEKEATRNEDILEFAKLNFNLQQLIFCEELKH 55
Query: 280 LT 285
T
Sbjct: 54 CT 49
Score = 31.3 bits (62), Expect(2) = 4e-011
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGP 96
++ R H E +LDEAI+F R L+ +L + P
Sbjct: 330 SYLRRHEEKVLDEAISFTRCCLQDILVLPESP 235
>gb|CL704700.2|CL704700 SP__Bb0027A10.f SP__Bb Sorghum propinquum genomic clone
SP__Bb0027A10 5', DNA sequence
Length = 745
Score = 69.3 bits (145), Expect = 5e-011
Identities = 25/83 (30%), Positives = 49/83 (59%)
Frame = +1 / -2
Query: 253 LHHQQELKILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIV 432
+++ E +L RWW D+ + ++P RD++++ ++W + SR R+ +T +IA+V
Sbjct: 249 MNYNDEDIMLCRWWMDVGLVEEIPVVRDQVMKWYMWSMTALQGCSFSRYRVEITKIIALV 70
Query: 433 TLLDDIFDSFATPQECEILTNCI 501
++DDIFD T +E + T +
Sbjct: 69 YVVDDIFDLVGTQEELSLFTEAV 1
>gb|CW280779.1|CW280779 104_756_11407812_116_35452_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407812, DNA
sequence
Length = 585
Score = 68.0 bits (142), Expect = 1e-010
Identities = 24/76 (31%), Positives = 46/76 (60%)
Frame = +1 / -2
Query: 277 ILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFD 456
+L RWW D+ + ++P RD++++ ++W + SR R+ +T +IA+V ++DDIFD
Sbjct: 380 MLCRWWMDLGLVQEIPVVRDQVMKWYMWSMTAVQGCSFSRYRVEITKIIALVYVVDDIFD 201
Query: 457 SFATPQECEILTNCIE 504
T +E + T ++
Sbjct: 200 LVGTLEELSLFTEAVK 153
>gb|CW077774.1|CW077774 104_385_10894023_148_31913_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894023, DNA
sequence
Length = 729
Score = 66.6 bits (139), Expect = 3e-010
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ + ++P RD++++ ++W + SR R+ +T +I++V ++DDIFD
Sbjct: 516 RWWMDLGLAQEIPVVRDQVLKWYMWSMTALQGYSFSRYRVEMTKIISLVYVVDDIFDLVG 337
Query: 466 TPQECEILTNCIESWD 513
T +E + T ++ D
Sbjct: 336 TLEELSLFTEAVKM*D 289
>gb|CW430767.1|CW430767 fsbb001f144k05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144k05, DNA
sequence
Length = 752
Score = 66.6 bits (139), Expect = 3e-010
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ + ++P RD++++ ++W + SR R+ +T +I++V ++DDIFD
Sbjct: 457 RWWMDLGLAQEIPVVRDQVLKWYMWSMTALQGYSFSRYRVEMTKIISLVYVVDDIFDLVG 278
Query: 466 TPQECEILTNCIESWD 513
T +E + T ++ D
Sbjct: 277 TLEELSLFTEAVKM*D 230
>gb|CW314315.1|CW314315 104_805_11471765_116_35877_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471765, DNA
sequence
Length = 655
Score = 64.8 bits (135), Expect = 1e-009
Identities = 22/73 (30%), Positives = 44/73 (60%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ + ++P ARD++++ + W + + S+ R+ +T +I+I ++DDIFD
Sbjct: 207 RWWMNLGLAQEIPVARDQVLKWYTWSMTILQGSSFSKYRVEITKIISIAYVVDDIFDLVG 386
Query: 466 TPQECEILTNCIE 504
T +E + T I+
Sbjct: 387 TLEELSLFTEAIK 425
>gb|CW479008.1|CW479008 fsbb001f237d06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f237d06, DNA
sequence
Length = 786
Score = 64.8 bits (135), Expect = 1e-009
Identities = 22/73 (30%), Positives = 44/73 (60%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ + ++P ARD++++ + W + + S+ R+ +T +I+I ++DDIFD
Sbjct: 234 RWWMNLGLAQEIPVARDQVLKWYTWSMTILQGSSFSKYRVEITKIISIAYVVDDIFDLVG 55
Query: 466 TPQECEILTNCIE 504
T +E + T I+
Sbjct: 54 TLEELSLFTEAIK 16
>gb|CW366624.1|CW366624 fsbb001f039l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f039l07, DNA
sequence
Length = 635
Score = 47.8 bits (98), Expect(2) = 1e-009
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +1 / -3
Query: 124 LEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKIL 282
L+IPLP+ + E+ YI Y + +L+LAKL+ N+LQ HQ ELK +
Sbjct: 222 LKIPLPRTLKRLEAVSYIPEYSVDPKCNRAILELAKLDFNLLQHLHQNELKTI 64
Score = 35.4 bits (71), Expect(2) = 1e-009
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1 / -1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ H E +L+EA+ FAR LE++ +K PL
Sbjct: 341 ANLLNHNEEVLEEALLFARRHLELIQSGLKSPL 243
>gb|CW172785.1|CW172785 104_584_11156479_116_36545_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156479, DNA
sequence
Length = 708
Score = 64.3 bits (134), Expect = 2e-009
Identities = 22/73 (30%), Positives = 44/73 (60%)
Frame = +1 / +3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW ++ + ++P ARD++++ + W + + S+ R+ +T +I+I ++DDIFD
Sbjct: 348 RWWMNLGLAQEVPVARDQVLKWYTWSMTILQGSSFSKYRVEITKIISIAYVVDDIFDLVG 527
Query: 466 TPQECEILTNCIE 504
T +E + T I+
Sbjct: 528 TLEELSLFTEAIK 566
>gb|CW317467.1|CW317467 104_809_11473428_148_35866_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473428, DNA
sequence
Length = 629
Score = 63.8 bits (133), Expect = 2e-009
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = +1 / -3
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ + ++P RD++++ ++W + SR R+ +T +IA++ ++DDIFD
Sbjct: 225 RWWMDLGLVQEIPIVRDQVLKWYMWSMTTLQGYSFSRYRVEITKIIALIYVVDDIFDLVG 46
Query: 466 TPQECEILTNCIE 504
T +E T ++
Sbjct: 45 TLEELSHFTEAVK 7
>gb|CW262233.1|CW262233 104_729_11229943_148_35203_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229943, DNA
sequence
Length = 718
Score = 44.1 bits (90), Expect(2) = 6e-009
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1 / +3
Query: 94 PLWAHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQEL 273
P A EV +LE +R E++ +I YE T + +L+ AKL+ N++Q + EL
Sbjct: 360 PDLAEEVTITLETTRFRRAERVEARRFISVYEKKATRDDTILEFAKLDYNIVQAVYCDEL 539
Query: 274 KILTRW 291
K L+ +
Sbjct: 540 KQLSMY 557
Score = 36.8 bits (74), Expect(2) = 6e-009
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 1 AHFRTHGETILDEAIAFARSRLEMML 78
AH RT GE ILD I F +SRLE ++
Sbjct: 264 AHMRTRGEDILDNIIVFNKSRLETVV 341
>gb|CW047378.1|CW047378 104_285_10512696_115_30217 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512696, DNA
sequence
Length = 576
Score = 61.6 bits (128), Expect = 1e-008
Identities = 21/64 (32%), Positives = 40/64 (62%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ + ++P RD++++ ++W + SR R+ +T +IA++ ++DDIFD
Sbjct: 204 RWWMDLGLVQEIPIVRDQVLKWYMWSMTTLQGYSFSRYRVEITKIIALIYVVDDIFDLVG 25
Query: 466 TPQE 477
T +E
Sbjct: 24 TLEE 13
>gb|CW106959.1|CW106959 104_476_11096284_148_34465_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096284, DNA
sequence
Length = 619
Score = 43.7 bits (89), Expect(2) = 2e-008
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +1 / +1
Query: 109 EVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELK 276
++ +L+IPLP+ R E+ +YI Y+ VL+LA+LN ++ + H +E++
Sbjct: 214 QISRALDIPLPRYLRPLETMHYITEYDKEEAYDATVLELARLNYSITRSLHLKEIR 381
Score = 35.4 bits (71), Expect(2) = 2e-008
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
AH GE ILD I+F RSRL + +V PL
Sbjct: 109 AHMAVPGEDILDNVISFTRSRLIAIKGHVASPL 207
>gb|BZ693882.1|BZ693882 SP__Ba0040C16.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0040C16 3', DNA sequence
Length = 868
Score = 59.3 bits (123), Expect = 5e-008
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ + ++P RD++++ ++W + SR R+ +T +I IV ++DDIFD
Sbjct: 228 RWWMDLGLVQEIPIVRDQVLKWYMWSMTTLQGYSFSRYRVEITKIITIVYVVDDIFDLVG 49
Query: 466 T 468
T
Sbjct: 48 T 46
>gb|CW787938.1|CW787938 SP__Ba0040C16.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0040C16 3', DNA sequence
Length = 831
Score = 58.8 bits (122), Expect = 7e-008
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +1 / -2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
RWW D+ + ++P RD++++ ++W + SR R+ +T +I IV ++DDIFD A
Sbjct: 206 RWWMDLGLVQEIPIVRDQVLKWYMWSMTTLQGYSFSRYRVEITKIITIVYVVDDIFDLVA 27
>gb|CN147553.1|CN147553 WOUND1_50_B06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_B06_A002 5', mRNA sequence
Length = 747
Score = 54.7 bits (113), Expect = 1e-006
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +1 / +3
Query: 391 SRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKIL 570
SR R+ +T +I++V ++DDIFD T +E + T ++ W+ A LP M+ + +
Sbjct: 300 SRYRVEMTKIISLVYVVDDIFDLVGTLEELSLFTEAVKMWNTAAADSLPSYMRSCYKALY 479
Query: 571 DSYQTITNMLHRE 609
I +M +E
Sbjct: 480 TITNEIADMAEKE 518
>gb|CN149964.1|CN149964 WOUND1_66_B10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_B10_A002 3', mRNA sequence
Length = 726
Score = 53.3 bits (110), Expect = 3e-006
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1 / +2
Query: 535 PGCMKFALEKILDSYQTITNMLHRED 612
P CMKFALEKI DSY+TI NMLH+E+
Sbjct: 2 PECMKFALEKIFDSYETIENMLHQEE 79
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -1 / -3
Query: 612 VLSVEHICNGLVAIQYLL*SKFHATW 535
+L V+HI NG + I+YLL SKFHA W
Sbjct: 79 LLLVKHIFNGFITIEYLLQSKFHALW 2
Score = 37.7 bits (76), Expect = 0.16
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 611 SSRWSIFVMVW*LSNIFSRANFMQPG 534
SS SIF MV *LSNIFS+ANFM G
Sbjct: 78 SSW*SIFSMVS*LSNIFSKANFMHSG 1
Score = 36.3 bits (73), Expect = 0.41
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 537 RLHEICSREDIG*LPDHYKYAPPRG 611
R+HEIC EDI *L +H KYA P G
Sbjct: 4 RVHEICFGEDIR*L*NH*KYASPGG 78
Score = 35.0 bits (70), Expect = 1.1
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 536 QVA*NLL*RRYWIATRPLQICSTER 610
Q A*NLL RRY I +PL+IC T R
Sbjct: 3 QSA*NLLWRRYSIVMKPLKICFTRR 77
Score = 32.2 bits (64), Expect = 7.1
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / -2
Query: 610 PLGGAYL*WSGSYPISSLEQISCNL 536
P G AY W +Y ISS +QISC L
Sbjct: 77 PPGEAYFQWFHNYRISSPKQISCTL 3
>gb|CN144336.1|CN144336 WOUND1_21_C07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_21_C07_A002 5', mRNA sequence
Length = 794
Score = 52.8 bits (109), Expect = 4e-006
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
AH RTHGE IL+EA+ F++ RLE +LPY++G L
Sbjct: 655 AHMRTHGEIILEEAMLFSQRRLETILPYMEGSL 753
Score = 50.6 bits (104), Expect = 2e-005
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -1
Query: 98 NGPFT*GSIISRRLLANAMASSSIVSPWVL 9
N P *GSI+S+RL N+MASSSI+SPWVL
Sbjct: 752 NDPSM*GSIVSKRLWLNSMASSSIISPWVL 663
Score = 34.1 bits (68), Expect = 2.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / -3
Query: 93 PFHVGQHHLQTASRERDGFIEYCLPMGPEM 4
PFHVG + T E GF++Y L MGP M
Sbjct: 747 PFHVG*YCF*TPLAE*HGFLKYNLSMGPHM 658
>gb|CW280780.1|CW280780 104_756_11407812_148_35456_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407812, DNA
sequence
Length = 593
Score = 47.8 bits (98), Expect = 1e-004
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1 / +2
Query: 277 ILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIV 432
+L RWW D+ + ++P RD++++ ++W + SR R+ +T +IA+V
Sbjct: 434 MLCRWWMDLGLVQEIPVVRDQVMKWYMWSMTAVQGCSFSRYRVEITKIIALV 589
>gb|CB926721.1|CB926721 ABA1_10_F10.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_10_F10_A012 3', mRNA sequence
Length = 662
Score = 47.3 bits (97), Expect = 2e-004
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1 / +2
Query: 541 CMKFALEKILDSYQTITNMLHRED 612
CMKF LEKI DSY TI NMLH+E+
Sbjct: 2 CMKFGLEKIFDSYGTIENMLHQEE 73
Score = 39.6 bits (80), Expect = 0.044
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 611 SSRWSIFVMVW*LSNIFSRANFM 543
SS WSIF MV *LSNIFS+ NFM
Sbjct: 72 SSWWSIFSMVP*LSNIFSKPNFM 4
Score = 39.1 bits (79), Expect = 0.061
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 612 VLSVEHICNGLVAIQYLL*SKFHA 541
+L VEHI NG +A++Y L*+KFHA
Sbjct: 73 LLLVEHIFNGPIAVEYFL*TKFHA 2
Score = 34.1 bits (68), Expect = 2.0
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 610 PLGGAYL*WSGSYPISSLEQISC 542
P GGAY WS S I SL QISC
Sbjct: 71 PPGGAYFQWSHSCRIFSLNQISC 3
Score = 33.6 bits (67), Expect = 2.8
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 540 LHEICSREDIG*LPDHYKYAPPRG 611
+HEI RE+I L DH KYAPP G
Sbjct: 1 VHEIWFRENIRQLWDH*KYAPPGG 72
Score = 33.6 bits (67), Expect = 2.8
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 542 A*NLL*RRYWIATRPLQICSTER 610
A*NL+*R+Y A PL+ICST R
Sbjct: 3 A*NLV*RKYSTAMGPLKICSTRR 71
>gb|CW077635.1|CW077635 104_383_10893365_116_31773_197 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893365, DNA
sequence
Length = 726
Score = 34.1 bits (68), Expect(2) = 9e-004
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / -1
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH T GE LDEAI+FAR LE +
Sbjct: 447 AHMATPGEQGLDEAISFARRHLESL 373
Score = 30.9 bits (61), Expect(2) = 9e-004
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1 / -1
Query: 286 RWWEDMQIGSKLPFARDRI 342
RWW+D+ KL +ARDR+
Sbjct: 57 RWWKDLYGNVKLNYARDRL 1
>gb|CW313303.1|CW313303 104_803_11471215_116_35786_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471215, DNA
sequence
Length = 758
Score = 44.6 bits (91), Expect = 0.001
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKG 93
AH RTHGE IL+EA+ F++ RLE P KG
Sbjct: 637 AHMRTHGEIILEEAMLFSQKRLETYYPTWKG 729
Score = 41.4 bits (84), Expect = 0.012
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 92 PFT*GSIISRRLLANAMASSSIVSPWVL 9
PF G +S+R N+MASSSI+SPWVL
Sbjct: 728 PFHVG*YVSKRFWLNSMASSSIISPWVL 645
>gb|BZ421989.1|BZ421989 id48c06.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id48c06 5', DNA sequence
Length = 765
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +1 / +1
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELK 276
A ++ +L+IPLP+ E+ ++I YE + +L+LA+L+ + + +EL+
Sbjct: 496 ADQICRALDIPLPRYMPQLETMHFITEYEQEDGHNATLLELARLDYCLTRSAQLKELR 669
Score = 30.4 bits (60), Expect(2) = 0.002
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ GE +LD IAF R+ LE M + P+
Sbjct: 397 AYLAVPGEDVLDGVIAFTRTHLEAMKGNLTSPI 495
>gb|CW149615.1|CW149615 104_548_11142588_116_36288_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142588, DNA
sequence
Length = 675
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +1 / +2
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELK 276
A ++ +L+IPLP+ E+ ++I YE + +L+LA+L+ + + +EL+
Sbjct: 440 ADQICRALDIPLPRYMPQLETMHFITEYEQEDGHNATLLELARLDYCLTRSAQLKELR 613
Score = 30.4 bits (60), Expect(2) = 0.002
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1 / +2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ GE +LD IAF R+ LE M + P+
Sbjct: 341 AYLAVPGEDVLDGVIAFTRTHLEAMKGNLTSPI 439
>gb|BZ423346.1|BZ423346 id48c06.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id48c06 5', DNA sequence
Length = 649
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +1 / -2
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELK 276
A ++ +L+IPLP+ E+ ++I YE + +L+LA+L+ + + +EL+
Sbjct: 450 ADQICRALDIPLPRYMPQLETMHFITEYEQEDGHNATLLELARLDYCLTRSAQLKELR 277
Score = 30.4 bits (60), Expect(2) = 0.002
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ GE +LD IAF R+ LE M + P+
Sbjct: 549 AYLAVPGEDVLDGVIAFTRTHLEAMKGNLTSPI 451
>gb|CW423099.1|CW423099 fsbb001f132m01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f132m01, DNA
sequence
Length = 657
Score = 42.3 bits (86), Expect = 0.007
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +1 / -1
Query: 337 RIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWD 513
++++ ++W + SR R+ +T +I++V ++DDIFD T +E + T ++ D
Sbjct: 645 QVLKWYMWSMTALQGYSFSRYRVEMTKIISLVYVVDDIFDLVGTLEELSLFTEAVKM*D 469
>gb|CW131796.1|CW131796 104_514_11115865_148_34790_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115865, DNA
sequence
Length = 685
Score = 41.4 bits (84), Expect = 0.012
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1 / -2
Query: 112 VRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
V +LEIPL R E++++I Y + +LQ AKL+ N +Q HQ++L +T
Sbjct: 291 VAHALEIPLHWRAPRLETRWFIDYYARDINMCPLLLQFAKLDFNQVQDEHQKDLAAVT 118
>gb|BZ330142.1|BZ330142 hv90c08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv90c08 5', DNA sequence
Length = 620
Score = 40.5 bits (82), Expect = 0.024
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1 / -1
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RTHGE +LDEAI F R LE L ++ L
Sbjct: 260 AYLRTHGEEVLDEAIIFTRRHLEAALTSLESKL 162
>gb|BZ330230.1|BZ330230 hv90h09.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv90h09 5', DNA sequence
Length = 718
Score = 40.5 bits (82), Expect = 0.024
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1 / -2
Query: 1 AHFRTHGETILDEAIAFARSRLEMMLPYVKGPL 99
A+ RTHGE +LDEAI F R LE L ++ L
Sbjct: 261 AYLRTHGEEVLDEAIIFTRRHLEAALTSLESKL 163
>gb|BG557623.1|BG557623 EM1_54_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 40.0 bits (81), Expect = 0.032
Identities = 13/29 (44%), Positives = 24/29 (82%)
Frame = +1 / -1
Query: 214 VLQLAKLNSNVLQLHHQQELKILTRWWED 300
+LQLA+++ N++Q H++EL +TRWW++
Sbjct: 168 ILQLAQVDFNLVQALHRRELAEVTRWWKE 82
>gb|CW029686.1|CW029686 104_257_10499816_114_30401 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499816, DNA
sequence
Length = 832
Score = 39.6 bits (80), Expect = 0.044
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1 / +2
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH RTHGE IL+EA+ F++ RLE
Sbjct: 764 AHMRTHGEIILEEAMLFSQRRLE 832
Score = 38.2 bits (77), Expect = 0.12
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 68 SRRLLANAMASSSIVSPWVL 9
S+RL N+MASSSI+SPWVL
Sbjct: 831 SKRLWLNSMASSSIISPWVL 772
>gb|CW206982.1|CW206982 104_635_11187874_148_36966_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187874, DNA
sequence
Length = 642
Score = 38.2 bits (77), Expect = 0.12
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2 / +2
Query: 23 RQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMRQVER 202
R +PS S W+ C HCGR + R R A ST+ S+TS R R++ +
Sbjct: 458 RTEQRRPSSSCRRGWKKCRERRWAHCGRTAAASSRRGRSRTTASSTAFSVTSPRHRRLSK 637
>gb|CW440648.1|CW440648 fsbb001f159g11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f159g11, DNA
sequence
Length = 715
Score = 38.2 bits (77), Expect = 0.12
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2 / -2
Query: 23 RQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMRQVER 202
R +PS S W+ C HCGR + R R A ST+ S+TS R R++ +
Sbjct: 621 RTEQRRPSSSCRRGWKKCRERRWAHCGRTAAASSRRGRSRTTASSTAFSVTSPRHRRLSK 442
>gb|BZ693191.1|BZ693191 SP__Ba0031E17.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0031E17 5', DNA sequence
Length = 594
Score = 36.8 bits (74), Expect = 0.30
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1 / -2
Query: 418 VIAIVTLLDDIFDSFATPQECEILTNCIE 504
+I +V ++DDIFD TP+E +LT I+
Sbjct: 347 IILLVCIVDDIFDLIGTPEELSLLTKAIK 261
>gb|CW078217.1|CW078217 104_390_10895968_116_31930_112 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895968, DNA
sequence
Length = 132
Score = 36.8 bits (74), Expect = 0.30
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1 / -1
Query: 277 ILTRWWEDMQIGSKLPFARDRIVECFLW 360
+L RWW D+ + ++P RD++++ ++W
Sbjct: 129 MLCRWWMDLGLVQEIPVVRDQVMKWYMW 46
>gb|CW787137.1|CW787137 SP__Ba0031E17.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0031E17 5', DNA sequence
Length = 565
Score = 36.8 bits (74), Expect = 0.30
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1 / -1
Query: 418 VIAIVTLLDDIFDSFATPQECEILTNCIE 504
+I +V ++DDIFD TP+E +LT I+
Sbjct: 352 IILLVCIVDDIFDLIGTPEELSLLTKAIK 266
>gb|CW787138.1|CW787138 SP__Ba0031E17.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0031E17 3', DNA sequence
Length = 845
Score = 36.8 bits (74), Expect = 0.30
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1 / -1
Query: 418 VIAIVTLLDDIFDSFATPQECEILTNCIE 504
+I +V ++DDIFD TP+E +LT I+
Sbjct: 335 IILLVCIVDDIFDLMGTPEELSLLTKAIK 249
>gb|BF657693.1|BF657693 OV2_20_F01.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 466
Score = 36.8 bits (74), Expect = 0.30
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA + F+WI G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 110 FAVGSAIALFMWITGILKRPKISGAQLFAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 289
Query: 505 SWDP 516
+ +P
Sbjct: 290 AMEP 301
>gb|BF657702.1|BF657702 OV2_20_G01.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 353
Score = 36.8 bits (74), Expect = 0.30
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA + F+WI G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 110 FAVGSAIALFMWITGILKRPKISGAQLFAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 289
Query: 505 SWDP 516
+ +P
Sbjct: 290 AMEP 301
>gb|BM324643.1|BM324643 PIC1_33_G04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 519
Score = 36.8 bits (74), Expect = 0.30
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA + F+WI G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 151 FAVGSAIALFMWITGILKRPKISGAQLFAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 330
Query: 505 SWDP 516
+ +P
Sbjct: 331 AMEP 342
>gb|CN124553.1|CN124553 RHOH1_5_B12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_B12_A002 5', mRNA sequence
Length = 740
Score = 36.8 bits (74), Expect = 0.30
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1 / +3
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA + F+WI G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 108 FAVGSAIALFMWITGILKRPKISGAQLFAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 287
Query: 505 SWDP 516
+ +P
Sbjct: 288 AMEP 299
>gb|CN138755.1|CN138755 OX1_13_E11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_E11_A002 5', mRNA sequence
Length = 716
Score = 36.8 bits (74), Expect = 0.30
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA + F+WI G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 358 FAVGSAIALFMWITGILKRPKISGAQLFAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 537
Query: 505 SWDP 516
+ +P
Sbjct: 538 AMEP 549
>gb|CL185041.1|CL185041 104_398_10899257_114_32368_067 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899257, DNA
sequence
Length = 668
Score = 36.3 bits (73), Expect = 0.41
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1 / -2
Query: 391 SRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
SR R+ +T +IA++ ++DDIFD T +E T ++
Sbjct: 628 SRYRVEITKIIALIYVVDDIFDLVGTLEELSHFTEAVK 515
>gb|CW252041.1|CW252041 104_715_11224274_148_35091_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224274, DNA
sequence
Length = 556
Score = 36.3 bits (73), Expect = 0.41
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2 / +1
Query: 32 SMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMR 190
S + S + W PT +G CGR + P R ++G+GST+ T+ R R
Sbjct: 397 SSRSSSTAATSWCGTRPTRRGSCGRASTTPATRCSPVRGSGSTATPGTTSR*R 555
>gb|CW430768.1|CW430768 fsbb001f144k05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144k05, DNA
sequence
Length = 740
Score = 36.3 bits (73), Expect = 0.41
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1 / +1
Query: 286 RWWEDMQIGSKLPFARDRIVECFLW 360
RWW D+ + ++P RD++++ ++W
Sbjct: 637 RWWMDLGLAQEIPVVRDQVLKWYMW 711
>gb|CW039677.1|CW039677 104_272_10505634_114_30389 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505634, DNA
sequence
Length = 470
Score = 35.9 bits (72), Expect = 0.56
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -3 / +2
Query: 247 ERWSSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSPARI*LHAPTMALSRRAASS 68
ERW AWQV S +A + + R C A S AR A ALSR A+++
Sbjct: 56 ERWRHAWQVTCASRSAAWSRSANAFSRSARARCLARRASSSARSAAAASPRALSRAASAA 235
>gb|CW252682.1|CW252682 104_715_11224646_148_35093_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224646, DNA
sequence
Length = 666
Score = 35.9 bits (72), Expect = 0.56
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2 / +1
Query: 23 RQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMR 190
R S + S + W PT +G CGR + P R +G+GST T+ R R
Sbjct: 4 RHPSSRSSSTAATSWCGTRPTRRGSCGRASTTPATRCSPARGSGSTGTPGTTSR*R 171
>gb|CW260258.1|CW260258 104_726_11228866_116_35193_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228866, DNA
sequence
Length = 682
Score = 35.9 bits (72), Expect = 0.56
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2 / +1
Query: 23 RQYSMKPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMR 190
R S + S + W PT +G CGR + P R +G+GST T+ R R
Sbjct: 79 RHPSSRSSSTAATSWCGTRPTRRGSCGRASTTPATRCSPARGSGSTGTPGTTSR*R 246
>gb|AW287232.2|AW287232 LG1_268_C02.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 416
Score = 35.9 bits (72), Expect = 0.56
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA +V F W G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 20 FAVGSVVSLFFWTTGIIKRPKISGAQLAAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 199
Query: 505 SWDP 516
+ +P
Sbjct: 200 AMEP 211
>gb|AW671381.1|AW671381 LG1_335_G10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 35.9 bits (72), Expect = 0.56
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1 / +3
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA +V F W G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 141 FAVGSVVSLFFWTTGIIKRPKISGAQLAAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 320
Query: 505 SWDP 516
+ +P
Sbjct: 321 AMEP 332
>gb|AW671933.1|AW671933 LG1_353_E03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 602
Score = 35.9 bits (72), Expect = 0.56
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1 / +2
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA +V F W G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 215 FAVGSVVSLFFWTTGIIKRPKISGAQLAAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 394
Query: 505 SWDP 516
+ +P
Sbjct: 395 AMEP 406
>gb|BM324874.1|BM324874 PIC1_36_H09.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 570
Score = 35.9 bits (72), Expect = 0.56
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1 / +1
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIE 504
FA +V F W G+ P S A++ + +AIV + ++F + + + T+ I+
Sbjct: 223 FAVGSVVSLFFWTTGIIKRPKISGAQLAAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIK 402
Query: 505 SWDP 516
+ +P
Sbjct: 403 AMEP 414
>gb|CN150040.1|CN150040 WOUND1_66_B10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_B10_A002 5', mRNA sequence
Length = 707
Score = 35.4 bits (71), Expect = 0.77
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 1 AHFRTHGETILDEAIAFARSR 63
AH RTHGE IL++AI F++ R
Sbjct: 645 AHMRTHGEVILEKAILFSQRR 707
Score = 34.1 bits (68), Expect = 2.0
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 62 RLLANAMASSSIVSPWVLKC 3
RL N+MA SSI SPWVL C
Sbjct: 706 RLWLNSMAFSSITSPWVLIC 647
>gb|CW232712.1|CW232712 104_685_11212963_116_37488_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212963, DNA
sequence
Length = 672
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1 / -1
Query: 364 LGVYYEPCHSRARIILTMVIAIVTLLDDI 450
LG Y P +++ +++T V+A++ LLDD+
Sbjct: 471 LGPGYSPAYTKEHVVVTRVLAVLILLDDV 385
>gb|CW232713.1|CW232713 104_685_11212963_148_37487_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212963, DNA
sequence
Length = 662
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 364 LGVYYEPCHSRARIILTMVIAIVTLLDDI 450
LG Y P +++ +++T V+A++ LLDD+
Sbjct: 269 LGPGYSPAYTKEHVVVTRVLAVLILLDDV 355
>gb|BF655878.1|BF655878 FM1_41_G08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 434
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +1 / +3
Query: 343 VECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFATPQECEILTNCIESWDP 516
+ F+WI G+ P S A++ + +AIV + ++F + + + T+ I++ +P
Sbjct: 201 IALFMWITGILKRPNISGAQLFAILPLAIVHTMGNLFTNMSLGKVAVSFTHTIKAMEP 374
>gb|CL175374.1|CL175374 104_381_10892409_116_31765_009 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892409, DNA
sequence
Length = 730
Score = 34.5 bits (69), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / +3
Query: 481 HILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYL 332
H L+ S +YRP V R++* + I +N ++++LLR PR +L
Sbjct: 435 HSLLLSNFVNRYRPTVGRYK*GVYI*CNSVNQFINTVLLRKKNLLPRSFL 584
>gb|CL175375.1|CL175375 104_381_10892409_148_31764_009 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892409, DNA
sequence
Length = 736
Score = 34.5 bits (69), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / -3
Query: 481 HILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYL 332
H L+ S +YRP V R++* + I +N ++++LLR PR +L
Sbjct: 443 HSLLLSNFVNRYRPTVGRYK*GVYI*CNSVNQFINTVLLRKKNLLPRSFL 294
>gb|CL178537.1|CL178537 104_386_10894652_148_31911_332 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894652, DNA
sequence
Length = 724
Score = 34.5 bits (69), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / +2
Query: 481 HILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYL 332
H L+ S +YRP V R++* + I +N ++++LLR PR +L
Sbjct: 173 HSLLLSNFVNRYRPTVGRYK*GVYI*CNSVNQFINTVLLRKKNLLPRSFL 322
>gb|CW102039.1|CW102039 104_470_11011125_116_34416_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011125, DNA
sequence
Length = 531
Score = 34.5 bits (69), Expect = 1.5
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1 / +2
Query: 286 RWWEDMQIGSKLPFARDRIVECFLWILGV 372
RWW ++ + ++P ARD++++ + W + +
Sbjct: 380 RWWMNLGLAQEVPVARDQVLKWYTWSMTI 466
>gb|CW133241.1|CW133241 104_516_11116653_148_34802_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11116653, DNA
sequence
Length = 647
Score = 34.5 bits (69), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / +1
Query: 481 HILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYL 332
H L+ S +YRP V R++* + I +N ++++LLR PR +L
Sbjct: 283 HSLLLSNFVNRYRPTVGRYK*GVYI*CNSVNQFINTVLLRKKNLLPRSFL 432
>gb|CW242588.1|CW242588 104_702_11219424_116_37566_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219424, DNA
sequence
Length = 719
Score = 34.5 bits (69), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / -1
Query: 481 HILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYL 332
H L+ S +YRP V R++* + I +N ++++LLR PR +L
Sbjct: 542 HSLLLSNFVNRYRPTVGRYK*GVYI*CNSVNQFINTVLLRKKNLLPRSFL 393
>gb|CW242589.1|CW242589 104_702_11219424_148_37565_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219424, DNA
sequence
Length = 712
Score = 34.5 bits (69), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / +1
Query: 481 HILVGSRKNRKYRPRVSRWR*PLSILSGLLNDTVHSILLRSIENTPRFYL 332
H L+ S +YRP V R++* + I +N ++++LLR PR +L
Sbjct: 436 HSLLLSNFVNRYRPTVGRYK*GVYI*CNSVNQFINTVLLRKKNLLPRSFL 585
>gb|CW299828.1|CW299828 104_783_11463323_116_36245_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463323, DNA
sequence
Length = 664
Score = 34.5 bits (69), Expect = 1.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH GE +LD+A+AFAR LE
Sbjct: 314 AHMAVPGEAVLDDAVAFARRHLE 246
>gb|CW342862.1|CW342862 104_844_11487109_116_36177_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487109, DNA
sequence
Length = 741
Score = 34.5 bits (69), Expect = 1.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH GE +LD+A+AFAR LE
Sbjct: 214 AHMAVPGEAVLDDAVAFARRHLE 146
>gb|CW395433.1|CW395433 fsbb001f083h10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083h10, DNA
sequence
Length = 821
Score = 34.5 bits (69), Expect = 1.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH GE +LD+A+AFAR LE
Sbjct: 273 AHMAVPGEAVLDDAVAFARRHLE 205
>gb|CW046793.1|CW046793 104_284_10512355_114_30219 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512355, DNA
sequence
Length = 276
Score = 25.8 bits (50), Expect(2) = 1.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / -2
Query: 284 QDGGRICRSDQNFLSHEI 337
QDGGR CRS +S +I
Sbjct: 248 QDGGRFCRSHPGCISLKI 195
Score = 24.9 bits (48), Expect(2) = 1.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / -2
Query: 423 RHRDTLGRYFRFFRDPTR 476
RHR T GR + +R+P R
Sbjct: 56 RHRSTTGRIEQVWREPRR 3
>gb|CW073409.1|CW073409 104_335_10779603_114_31363_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779603, DNA
sequence
Length = 753
Score = 34.1 bits (68), Expect = 2.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2 / -3
Query: 122 RWRSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TPT 244
+WR RC S +S+TS R R+ RR PS TP+
Sbjct: 187 QWRRRCRSSGSSWPESLTS*RTRRRSAPSRRAPTYPSPTPS 65
>gb|CW139092.1|CW139092 104_529_11135052_116_34905_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135052, DNA
sequence
Length = 655
Score = 34.1 bits (68), Expect = 2.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / -3
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH T GE LDEAI+FAR LE +
Sbjct: 326 AHMATPGEQGLDEAISFARRHLESL 252
>gb|CW139093.1|CW139093 104_529_11135052_148_34909_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135052, DNA
sequence
Length = 634
Score = 34.1 bits (68), Expect = 2.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH T GE LDEAI+FAR LE +
Sbjct: 486 AHMATPGEQGLDEAISFARRHLESL 560
>gb|CW365318.1|CW365318 fsbb001f037n02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037n02, DNA
sequence
Length = 671
Score = 34.1 bits (68), Expect = 2.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2 / +1
Query: 122 RWRSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TPT 244
+WR RC S +S+TS R R+ RR PS TP+
Sbjct: 220 QWRRRCRSSGSSWPESLTS*RTRRRSAPSRRAPTYPSPTPS 342
>gb|CW370234.1|CW370234 fsbb001f045a19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f045a19, DNA
sequence
Length = 577
Score = 34.1 bits (68), Expect = 2.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2 / +1
Query: 122 RWRSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TPT 244
+WR RC S +S+TS R R+ RR PS TP+
Sbjct: 172 QWRRRCRSSGSSWPESLTS*RTRRRSAPSRRAPTYPSPTPS 294
>gb|CN143324.1|CN143324 WOUND1_15_C03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_15_C03_A002 5', mRNA sequence
Length = 827
Score = 34.1 bits (68), Expect = 2.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1 / +3
Query: 112 VRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHH 261
V +LEIPL R E++++I Y + +LQ AKL+ N +Q H
Sbjct: 678 VAHALEIPLHWRAPRLETRWFIDYYARDINMCPLLLQFAKLDFNQVQDEH 827
>gb|CL196714.1|CL196714 104_423_10943238_114_32326_029 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943238, DNA
sequence
Length = 758
Score = 33.6 bits (67), Expect = 2.8
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLE 69
AH GE +LD+A+AFAR LE
Sbjct: 520 AHMAVPGEAVLDDAMAFARRHLE 588
>gb|CF487544.1|CF487544 POL1_44_A08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_44_A08_A002 5', mRNA sequence
Length = 377
Score = 33.6 bits (67), Expect = 2.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2 / +2
Query: 122 RWRSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TP 241
+WR RC S +S+TS R R+ RR PS TP
Sbjct: 176 QWRRRCRSSGSSWPESLTS*RTRRRSAPSRRAPTYPSPTP 295
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
hypothetical protein, putative NAM protein, putative
cis-zeatin O-glucosyltransferases, putative small nuclear
ribonucleoprotein, putative cis-zeatin
O-glucosyltransferase, putative glutathione peroxidase,
putative copper-exporting ATPases, putative
serine/threonine dehydratase, and putative actin
depolymerizing factor genes, complete cds; and
hypothetical protein gene, partial cds
Length = 157237
Score = 33.6 bits (67), Expect = 2.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / -2
Query: 349 CFLWILGVYYEPCHSRARIILTMVI 423
CFLW +G Y EPC R I ++
Sbjct: 32922 CFLWFIGFYIEPCPYAPRHIFGAIV 32848
Score = 32.2 bits (64), Expect = 7.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 349 CFLWILGVYYEPC 387
CFLW +G Y EPC
Sbjct: 31743 CFLWFIGFYIEPC 31781
>gb|CW454062.1|CW454062 fsbb001f198f10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198f10, DNA
sequence
Length = 433
Score = 33.1 bits (66), Expect = 3.8
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = -3 / +1
Query: 247 ERWSSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSPARI*LHAPTMALSRRAASS 68
ERW AWQV S +A + + R C A S AR A A SR A+++
Sbjct: 196 ERWRHAWQVTCASRSAAWSRSANAFSRSARARCLARRASSSARSAAAASPRARSRAASAA 375
>gb|CW411963.1|CW411963 fsbb001f107f22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f107f22, DNA
sequence
Length = 435
Score = 27.2 bits (53), Expect(2) = 4.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3 / -1
Query: 175 CNTLTRRSCPF*AAGSPAR 119
C T +RR CP A SPAR
Sbjct: 321 CRTRSRRRCP*APAASPAR 265
Score = 23.1 bits (44), Expect(2) = 4.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / -1
Query: 103 PTMALSRRAASSPDGFSRTRW 41
P A + R A P SRTRW
Sbjct: 147 PRSAPAARPARRPSRRSRTRW 85
>gb|CW315066.1|CW315066 104_806_11472161_116_35823_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472161, DNA
sequence
Length = 56
Score = 32.7 bits (65), Expect = 5.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 457 SFATPQECEILTNCIE 504
S+ATP+ECE+L CI+
Sbjct: 54 SYATPEECELLNKCIQ 7
>gb|CW315067.1|CW315067 104_806_11472161_148_35827_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472161, DNA
sequence
Length = 56
Score = 32.7 bits (65), Expect = 5.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 457 SFATPQECEILTNCIE 504
S+ATP+ECE+L CI+
Sbjct: 1 SYATPEECELLNKCIQ 48
>gb|BE592120.1|BE592120 LG1_224_F05.b2_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 370
Score = 32.7 bits (65), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 98 CGRMKSDPRWRSRCLKGAGSTSQSITS 178
C R +S PRWR + G G T+ S ++
Sbjct: 125 CARPRSSPRWRRPAVPGTGPTASSTSA 205
>gb|BZ330297.1|BZ330297 hv91c08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv91c08 5', DNA sequence
Length = 373
Score = 32.2 bits (64), Expect = 7.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2 / -3
Query: 38 KPSRSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQ 166
+P R R W PT + R + P WR R GAG+ S+
Sbjct: 341 RPGRRRSRRWCRRTPTARAPRSRPRRRPPWRRRAPTGAGAASR 213
>gb|CC059604.1|CC059604 ii25d03.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii25d03, DNA sequence
Length = 544
Score = 32.2 bits (64), Expect = 7.1
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 317 FDPICISSHHLVRIF 273
FDP+CISSH L+ +F
Sbjct: 524 FDPVCISSHKLIGVF 480
>gb|CW037683.1|CW037683 104_269_10504486_114_30383 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504486, DNA
sequence
Length = 822
Score = 32.2 bits (64), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / -1
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH GE +LD+AIAF R+ L M
Sbjct: 429 AHMAVPGEDVLDDAIAFTRTHLVAM 355
>gb|CW042207.1|CW042207 104_276_10506989_114_30357 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506989, DNA
sequence
Length = 648
Score = 32.2 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3 / -2
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSP 125
SS VP +L+HTH TL RR CP G P
Sbjct: 200 SSVLLPPVPRALHSYLAHTHTAATLLRRHCPAWFLGRP 87
>gb|CW042208.1|CW042208 104_276_10506989_114_30475 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506989, DNA
sequence
Length = 661
Score = 32.2 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3 / -3
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSP 125
SS VP +L+HTH TL RR CP G P
Sbjct: 200 SSVLLPPVPRALHSYLAHTHTAATLLRRHCPAWFLGRP 87
>gb|CW058537.1|CW058537 104_301_10518790_115_30164 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518790, DNA
sequence
Length = 517
Score = 32.2 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3 / +1
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSP 125
SS VP +L+HTH TL RR CP G P
Sbjct: 337 SSVLLPPVPRALHSYLAHTHTAATLLRRHCPAWFLGRP 450
>gb|CW162043.1|CW162043 104_569_11150737_148_36443_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150737, DNA
sequence
Length = 746
Score = 32.2 bits (64), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / -1
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH GE +LD+AIAF R+ L M
Sbjct: 248 AHMAVPGEDVLDDAIAFTRTHLVAM 174
>gb|CW190327.1|CW190327 104_611_11174445_116_36749_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174445, DNA
sequence
Length = 511
Score = 32.2 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3 / +2
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSP 125
SS VP +L+HTH TL RR CP G P
Sbjct: 35 SSVLLPPVPRALHSYLAHTHTAATLLRRHCPAWFLGRP 148
>gb|CW196421.1|CW196421 104_620_11181158_148_36815_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181158, DNA
sequence
Length = 648
Score = 32.2 bits (64), Expect = 7.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3 / +2
Query: 232 AWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSPARI*LHAPTMAL 89
+W + PS AFH + ++ R + AA SP R LH+PT A+
Sbjct: 62 SWTLQ*PSMRAFHPTTSNPSIPRPRTNISAKAAASPTRPVLHSPTSAV 205
>gb|CW260073.1|CW260073 104_726_11228770_116_35193_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228770, DNA
sequence
Length = 689
Score = 32.2 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3 / -1
Query: 238 SSAWQVAVPSHAAFHLSHTHGCNTLTRRSCPF*AAGSP 125
SS VP +L+HTH TL RR CP G P
Sbjct: 200 SSVLLPPVPRALHSYLAHTHTAATLLRRHCPAWFLGRP 87
>gb|CW339177.1|CW339177 104_839_11485134_148_36136_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485134, DNA
sequence
Length = 554
Score = 32.2 bits (64), Expect = 7.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2 / -2
Query: 47 RSREAVWR*CCPT*KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMR 190
RSR +WR + CGR P RS L+ G+T++ + R R
Sbjct: 169 RSRRRIWRSRSSSSSTSCGRRTRIPACRSSRLRA*GTTARLVNPPRFR 26
>gb|CW379881.1|CW379881 fsbb001f059g02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059g02, DNA
sequence
Length = 607
Score = 32.2 bits (64), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1 / -3
Query: 148 GRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLH 258
G +Y Y+ ETS T + KV+ LAK N+ +L+
Sbjct: 317 GNLYFQNYFEFCIETSKTQNTKVVHLAKSNNFAFELN 207
>gb|CW379882.1|CW379882 fsbb001f059g02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059g02, DNA
sequence
Length = 617
Score = 32.2 bits (64), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1 / +3
Query: 148 GRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLH 258
G +Y Y+ ETS T + KV+ LAK N+ +L+
Sbjct: 300 GNLYFQNYFEFCIETSKTQNTKVVHLAKSNNFAFELN 410
>gb|CW413437.1|CW413437 fsbb001f112j09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112j09, DNA
sequence
Length = 499
Score = 32.2 bits (64), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH GE +LD+AIAF R+ L M
Sbjct: 314 AHMAVPGEDVLDDAIAFTRTHLVAM 388
>gb|BE600208.1|BE600208 PI1_80_F06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 386
Score = 32.2 bits (64), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / +3
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH GE +LD+AIAF R+ L M
Sbjct: 270 AHMAVPGEDVLDDAIAFTRTHLVAM 344
>gb|CD427321.1|CD427321 SA1_18_H07.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_H07_A002 5', mRNA sequence
Length = 707
Score = 32.2 bits (64), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / +1
Query: 1 AHFRTHGETILDEAIAFARSRLEMM 75
AH GE +LD+AIAF R+ L M
Sbjct: 532 AHMAVPGEDVLDDAIAFTRTHLVAM 606
>gb|CN144757.1|CN144757 WOUND1_24_C04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_24_C04_A002 5', mRNA sequence
Length = 684
Score = 32.2 bits (64), Expect = 7.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 498 HRKLGSQRGSRPPRLHEICSREDIG 572
HR+ G + G R P + ++C RE +G
Sbjct: 94 HRRGGDRHGGRRPLMSKLCERESVG 20
>gb|CW486179.1|CW486179 fsbb001f249e20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f249e20, DNA
sequence
Length = 603
Score = 27.2 bits (53), Expect(2) = 7.8
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2 / +2
Query: 89 KGHCGRMKSDPRWRSRCLKGAGSTSQSITSMRMRQVERCMRRYCNLPS*TPT 244
+ CGR +S RW R +GA S + + R RR + + T T
Sbjct: 80 RARCGRSRSRTRWCPRTCRGARPRRPSAPAAPAGRSRRRRRRRSSSSAATTT 235
Score = 22.1 bits (42), Expect(2) = 7.8
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3 / +1
Query: 219 ATCQAELQRSAAPSSARAEDPDKMVGGY 302
++C+AE + A+D D +G Y
Sbjct: 250 SSCRAEQLTISGSGDVAADDDDAGIGNY 333
>gb|CW245137.1|CW245137 104_706_11220908_116_35081_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220908, DNA
sequence
Length = 632
Score = 29.0 bits (57), Expect(2) = 8.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2 / +1
Query: 260 *WSCRTLEFSLASCSTFSCSVPLVSYAWM*YF 165
*W TL + + S SCS PL+S + *YF
Sbjct: 418 *WRVVTLRYLGKTLSRSSCSHPLLSSTYF*YF 513
Score = 21.7 bits (41), Expect(2) = 8.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 323 GSFDPICISSHHLV 282
G+ PIC++ HLV
Sbjct: 17 GALLPICLAEKHLV 58
>gb|CL164136.1|CL164136 104_358_10807698_114_31814_066 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807698, DNA
sequence
Length = 755
Score = 31.8 bits (63), Expect = 9.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1 / +1
Query: 148 GRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
G +Y Y+ ETS T + KV+ LAK+ + +L+ + L LT
Sbjct: 400 GNLYFQNYFEFCIETSKTQNTKVVHLAKIYNFYFELNFKFCLVFLT 537
>gb|CL164137.1|CL164137 104_358_10807698_116_31815_066 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807698, DNA
sequence
Length = 688
Score = 31.8 bits (63), Expect = 9.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1 / -3
Query: 148 GRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
G +Y Y+ ETS T + KV+ LAK+ + +L+ + L LT
Sbjct: 557 GNLYFQNYFEFCIETSKTQNTKVVHLAKIYNFYFELNFKFCLVFLT 420
>gb|CW123075.1|CW123075 104_502_11111018_116_34690_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111018, DNA
sequence
Length = 617
Score = 31.8 bits (63), Expect = 9.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1 / +1
Query: 160 ESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
E +Y+I ++ + +V + A +N + LHHQQE I T
Sbjct: 322 ELQYFIDSFLCKSICNYRVAKAAPSKANPVILHHQQEQSIRT 447
>gb|CW149616.1|CW149616 104_548_11142588_148_36287_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142588, DNA
sequence
Length = 703
Score = 31.8 bits (63), Expect = 9.8
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +1 / -1
Query: 103 AHEVRSSLEIPLPKRGRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELK 276
A ++ +L+IPLP+ E+ ++I YE + +L+LA+L+ + + +EL+
Sbjct: 676 ADQICRALDIPLPRYMPQLETMHFITEYEQEDGHNATLLELARLDYCLTRSAQLKELR 503
>gb|CW194434.1|CW194434 104_617_11180093_148_36791_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180093, DNA
sequence
Length = 626
Score = 31.8 bits (63), Expect = 9.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / -1
Query: 213 GTATCQAELQRSAAPSSARAEDPDKMVGG 299
GTATC + L RSA P +A + P + G
Sbjct: 104 GTATCPSSLARSAGPPTATSTPPARTRSG 18
>gb|CW222010.1|CW222010 104_657_11202152_148_37449_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202152, DNA
sequence
Length = 689
Score = 31.8 bits (63), Expect = 9.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1 / -2
Query: 175 IHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILTRWWEDMQI 309
+ A G LH + L L L ++LQ+ HQ L + W+ + I
Sbjct: 514 VDAVARRGELHRQELVLGALQPHLLQMPHQHRLALHPYPWQQISI 380
>gb|CW292545.1|CW292545 104_772_11414145_116_35579_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414145, DNA
sequence
Length = 652
Score = 31.8 bits (63), Expect = 9.8
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 486 TH*LHRKLGSQRGSRPPRLHEI 551
+H LHRK G+Q GS RLHE+
Sbjct: 307 SHPLHRKKGTQVGSSECRLHEL 242
>gb|CW315575.1|CW315575 104_806_11472436_148_35828_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472436, DNA
sequence
Length = 641
Score = 31.8 bits (63), Expect = 9.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1 / -2
Query: 160 ESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
E +Y+I ++ + +V + A +N + LHHQQE I T
Sbjct: 598 ELQYFIDSFLCKSICNYRVAKAAPSKANPVILHHQQEQSIRT 473
>gb|CW364940.1|CW364940 fsbb001f037d12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037d12, DNA
sequence
Length = 791
Score = 31.8 bits (63), Expect = 9.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1 / +3
Query: 160 ESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQELKILT 285
E +Y+I ++ + +V + A +N + LHHQQE I T
Sbjct: 372 ELQYFIDSFLCKSICNYRVAKAAPSKANPVILHHQQEQSIRT 497
>gb|AW672107.1|AW672107 LG1_357_G09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 429
Score = 31.8 bits (63), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 98 CGRMKSDPRWRSRCLKGAGSTSQSITS 178
C R + PRWR + + G G T+ S ++
Sbjct: 139 CARPRPSPRWRRQAVPGTGPTASSTSA 219
>gb|CF489608.1|CF489608 POL1_58_C12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_58_C12_A002 5', mRNA sequence
Length = 703
Score = 31.8 bits (63), Expect = 9.8
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1 / +3
Query: 325 FARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDIFDSFA 465
FA + F+WI G+ P S A++ + +AIV + ++F + +
Sbjct: 558 FAVGSAIALFMWITGILKRPKISGAQLFAILPLAIVHTMGNLFTNMS 698
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 830,438,371
Number of Sequences: 832831
Number of extensions: 12158263
Number of successful extensions: 95876
Number of sequences better than 10.0: 186
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17946976950
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)