TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAM10b11.yg.2.1
(554 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG052961.1|BG052961 RHIZ2_15_E12.b1_A003 Rhizome2 (RHIZ2... 205 5e-052
gb|BG053088.1|BG053088 RHIZ2_16_E01.b1_A003 Rhizome2 (RHIZ2... 205 5e-052
gb|CN140896.1|CN140896 OX1_47_G09.g1_A002 Oxidatively-stres... 187 1e-047
gb|CD427306.1|CD427306 SA1_18_G02.g1_A002 Salicylic acid-tr... 188 6e-047
gb|CF433825.1|CF433825 NIT1_30_H09.g1_A002 Nitrogen-deficie... 188 6e-047
gb|CD231785.1|CD231785 SS1_23_E05.g1_A012 Salt-stressed see... 187 1e-046
gb|CF761849.1|CF761849 DSAF1_82_F02.b1_A011 Drought-stresse... 177 9e-046
gb|CD425497.1|CD425497 SA1_12_E01.g1_A002 Salicylic acid-tr... 162 3e-043
gb|CF428787.1|CF428787 PH1_17_E09.g1_A002 Phosphorous-defic... 174 1e-042
gb|CW369347.1|CW369347 fsbb001f043l13k0 Sorghum methylation... 139 7e-039
gb|CW364277.1|CW364277 fsbb001f036e02k0 Sorghum methylation... 116 2e-038
gb|CW262804.1|CW262804 104_730_11230283_116_35223_038 Sorgh... 134 2e-037
gb|CX617759.1|CX617759 GABR1_35_D02.g1_A002 GA- or brassino... 154 1e-036
gb|CW108986.1|CW108986 104_480_11097816_116_34494_082 Sorgh... 139 7e-036
gb|CW150914.1|CW150914 104_551_11143663_148_36312_024 Sorgh... 102 4e-035
gb|BI140911.1|BI140911 IP1_40_G03.b1_A002 Immature pannicle... 148 6e-035
gb|BG948036.1|BG948036 IP1_8_E11.b1_A002 Immature pannicle ... 148 8e-035
gb|CL190792.1|CL190792 104_409_10906327_116_32496_028 Sorgh... 128 9e-035
gb|CF485636.1|CF485636 POL1_32_E07.g1_A002 Pollen Sorghum b... 144 7e-034
gb|AW924370.1|AW924370 WS1_69_G04.b1_A002 Water-stressed 1 ... 143 3e-033
gb|BM323397.1|BM323397 PIC1_18_G10.b1_A002 Pathogen-infecte... 143 3e-033
gb|CN127353.1|CN127353 RHOH1_22_B10.g3_A002 Acid- and alkal... 143 3e-033
gb|CD429264.1|CD429264 ETH1_3_B01.g1_A002 Ethylene-treated ... 142 5e-033
gb|CD222700.1|CD222700 CCC1_23_E04.g1_A007 Callus culture/c... 137 1e-031
gb|CD425816.1|CD425816 SA1_14_G10.g1_A002 Salicylic acid-tr... 137 1e-031
gb|CW308973.1|CW308973 104_797_11468951_148_35723_086 Sorgh... 108 8e-031
gb|CW231449.1|CW231449 104_680_11211126_148_37338_019 Sorgh... 121 1e-030
gb|CW368379.1|CW368379 fsbb001f042f04k0 Sorghum methylation... 129 3e-029
gb|CW438144.1|CW438144 fsbb001f155j19k0 Sorghum methylation... 83 3e-029
gb|BM323720.1|BM323720 PIC1_22_E06.b1_A002 Pathogen-infecte... 129 4e-029
gb|CL190791.1|CL190791 104_409_10906327_114_32488_028 Sorgh... 128 5e-029
gb|CW024327.1|CW024327 104_164_10434894_5_30003 Sorghum met... 101 1e-028
gb|CW272191.1|CW272191 104_744_11403330_116_36224_071 Sorgh... 101 2e-028
gb|CW388305.1|CW388305 fsbb001f073a03k0 Sorghum methylation... 93 2e-028
gb|CL171160.1|CL171160 104_372_10889226_116_31779_282 Sorgh... 101 2e-028
gb|CW168731.1|CW168731 104_578_11154304_116_36602_056 Sorgh... 94 7e-028
gb|CW452002.1|CW452002 fsbb001f192f10k0 Sorghum methylation... 94 7e-028
gb|CW170733.1|CW170733 104_581_11155366_148_36519_091 Sorgh... 94 7e-028
gb|CW450257.1|CW450257 fsbb001f188m24f0 Sorghum methylation... 94 9e-027
gb|CF074178.1|CF074178 FE1_21_G09.g1_A002 Iron-deficient se... 121 1e-026
gb|CW229576.1|CW229576 104_670_11207375_148_37260_082 Sorgh... 90 2e-026
gb|BE361422.1|BE361422 DG1_72_A10.b1_A002 Dark Grown 1 (DG1... 119 3e-026
gb|CW099092.1|CW099092 104_465_11003364_116_34375_034 Sorgh... 98 3e-026
gb|CW114465.1|CW114465 104_489_11106006_148_34566_027 Sorgh... 98 3e-026
gb|CW095034.1|CW095034 104_459_11001056_148_34272_018 Sorgh... 98 3e-026
gb|CW471871.1|CW471871 fsbb001f226a22f0 Sorghum methylation... 88 4e-026
gb|CW287624.1|CW287624 104_765_11411512_148_35528_052 Sorgh... 88 4e-026
gb|CL158334.1|CL158334 104_347_10803469_116_31378_061 Sorgh... 88 5e-026
gb|CW096794.1|CW096794 104_462_11002093_116_34348_053 Sorgh... 117 1e-025
gb|CW357695.1|CW357695 fsbb001f024h13f0 Sorghum methylation... 96 2e-025
gb|CD426727.1|CD426727 SA1_22_A03.g1_A002 Salicylic acid-tr... 116 2e-025
gb|CD463286.1|CD463286 ETH1_43_C05.g1_A002 Ethylene-treated... 116 2e-025
gb|CF489453.1|CF489453 POL1_57_E02.g1_A002 Pollen Sorghum b... 116 4e-025
gb|CL183598.1|CL183598 104_396_10898277_116_31924_117 Sorgh... 115 5e-025
gb|BG463743.1|BG463743 EM1_51_D11.b1_A002 Embryo 1 (EM1) So... 115 5e-025
gb|CB926284.1|CB926284 ABA1_7_D05.g1_A012 Abscisic acid-tre... 114 1e-024
gb|BZ331676.1|BZ331676 hx22a09.b1 WGS-SbicolorF (JM107 adap... 108 6e-023
gb|BZ331859.1|BZ331859 hx23e03.b1 WGS-SbicolorF (JM107 adap... 107 1e-022
gb|BE359159.1|BE359159 DG1_39_F09.b1_A002 Dark Grown 1 (DG1... 73 4e-022
gb|CL158333.1|CL158333 104_347_10803469_114_31377_061 Sorgh... 74 6e-022
gb|CW026820.1|CW026820 104_253_10498163_116_30527 Sorghum m... 104 1e-021
gb|CL176261.1|CL176261 104_382_10893014_148_31762_230 Sorgh... 104 1e-021
gb|CW207985.1|CW207985 104_637_11188439_116_37465_090 Sorgh... 86 3e-021
gb|CW464033.1|CW464033 fsbb001f213a22k0 Sorghum methylation... 101 9e-021
>gb|BG052961.1|BG052961 RHIZ2_15_E12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 452
Score = 205 bits (442), Expect = 5e-052
Identities = 80/111 (72%), Positives = 96/111 (86%)
Frame = +2 / +2
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
++ +S+YTSDGTLD+N Q ALK+ TGNWRACF+ILGTEF E LAF+A +KNL+TYL EL
Sbjct: 14 EDEASQYTSDGTLDVNDQPALKQRTGNWRACFIILGTEFTESLAFFAISKNLITYLMTEL 193
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
E N+DAA +VSTWIGSC+LTPLI AFLADTYWG YKT++VFLL+Y VGML
Sbjct: 194 HERNVDAARDVSTWIGSCFLTPLIGAFLADTYWGAYKTIVVFLLVYTVGML 346
Score = 159 bits (341), Expect = 4e-038
Identities = 78/113 (69%), Positives = 89/113 (78%)
Frame = -3 / -3
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SIPT+*+KRKT IVLY PQYVSAKKA + GVR QLPIQV+T +AAS L S SS +R*V R
Sbjct: 345 SIPTV*TKRKTTIVLYAPQYVSAKKAPIRGVRKQLPIQVETSLAASTLRSWSSVMR*VIR 166
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEASSSS 214
FF +A NAR S NSVP+IMKHALQFPV F+A L SSVPSLVY E +SS +
Sbjct: 165 FFDIAKNARDSVNSVPKIMKHALQFPVRCFKAG*SLTSSVPSLVYCEASSSGA 7
Score = 157 bits (338), Expect = 1e-037
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = -2 / -2
Query: 553 KHPNDVEQEEDYHRLVSSPVRVGQEGADERREVAAANPGGHVRRGIDVGLTKLSREVGDQ 374
+HPN V+QEEDY+RLV SP+ VGQEG+D+R E A ANPG + RGI + L +LS E+GD
Sbjct: 346 EHPNGVDQEEDYYRLVCSPICVGQEGSDKRCEEATANPGRDIPRGIHIALVELSHEIGD* 167
Query: 373 VLCGRVKCQAFGELGTQNHEACSPVPGALLQSTLLVDIERSVASV 239
VL KCQ F ELGT N+EACSP+PGALLQS L+V+++RSVAS+
Sbjct: 166 VL*YSEKCQGFRELGT*NNEACSPIPGALLQSRLIVNVKRSVASI 32
Score = 151 bits (324), Expect = 9e-036
Identities = 66/106 (62%), Positives = 77/106 (72%)
Frame = +1 / +1
Query: 235 TIH*RRNARYQQAACSEEEHRELESMLHDSGYRVRRMPGILRDRKEPGHLPHG*AW*DQH 414
TI+*RRNA ++AC E HRELESMLH YRV +PGI R KEP HL H *A Q
Sbjct: 28 TIY*RRNA*R*RSACFEAAHRELESMLHYFRYRVHGIPGIFRYIKEPNHLSHD*APRAQC 207
Query: 415 RCRDERVHLDWQLLPHAAHQRLLGRHVLGKIQDDDSLPLALHRWDA 552
CR+ ++LDWQLLPH +++ LLGRH+LG IQDD SLPL LHRWDA
Sbjct: 208 GCREGCLYLDWQLLPHTSYRSLLGRHILGSIQDDSSLPLGLHRWDA 345
>gb|BG053088.1|BG053088 RHIZ2_16_E01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 404
Score = 205 bits (442), Expect = 5e-052
Identities = 80/111 (72%), Positives = 96/111 (86%)
Frame = +2 / +2
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
++ +S+YTSDGTLD+N Q ALK+ TGNWRACF+ILGTEF E LAF+A +KNL+TYL EL
Sbjct: 14 EDEASQYTSDGTLDVNDQPALKQRTGNWRACFIILGTEFTESLAFFAISKNLITYLMTEL 193
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
E N+DAA +VSTWIGSC+LTPLI AFLADTYWG YKT++VFLL+Y VGML
Sbjct: 194 HERNVDAARDVSTWIGSCFLTPLIGAFLADTYWGAYKTIVVFLLVYTVGML 346
Score = 159 bits (341), Expect = 4e-038
Identities = 78/113 (69%), Positives = 89/113 (78%)
Frame = -3 / -3
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SIPT+*+KRKT IVLY PQYVSAKKA + GVR QLPIQV+T +AAS L S SS +R*V R
Sbjct: 345 SIPTV*TKRKTTIVLYAPQYVSAKKAPIRGVRKQLPIQVETSLAASTLRSWSSVMR*VIR 166
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEASSSS 214
FF +A NAR S NSVP+IMKHALQFPV F+A L SSVPSLVY E +SS +
Sbjct: 165 FFDIAKNARDSVNSVPKIMKHALQFPVRCFKAG*SLTSSVPSLVYCEASSSGA 7
Score = 157 bits (338), Expect = 1e-037
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = -2 / -2
Query: 553 KHPNDVEQEEDYHRLVSSPVRVGQEGADERREVAAANPGGHVRRGIDVGLTKLSREVGDQ 374
+HPN V+QEEDY+RLV SP+ VGQEG+D+R E A ANPG + RGI + L +LS E+GD
Sbjct: 346 EHPNGVDQEEDYYRLVCSPICVGQEGSDKRCEEATANPGRDIPRGIHIALVELSHEIGD* 167
Query: 373 VLCGRVKCQAFGELGTQNHEACSPVPGALLQSTLLVDIERSVASV 239
VL KCQ F ELGT N+EACSP+PGALLQS L+V+++RSVAS+
Sbjct: 166 VL*YSEKCQGFRELGT*NNEACSPIPGALLQSRLIVNVKRSVASI 32
Score = 151 bits (324), Expect = 9e-036
Identities = 66/106 (62%), Positives = 77/106 (72%)
Frame = +1 / +1
Query: 235 TIH*RRNARYQQAACSEEEHRELESMLHDSGYRVRRMPGILRDRKEPGHLPHG*AW*DQH 414
TI+*RRNA ++AC E HRELESMLH YRV +PGI R KEP HL H *A Q
Sbjct: 28 TIY*RRNA*R*RSACFEAAHRELESMLHYFRYRVHGIPGIFRYIKEPNHLSHD*APRAQC 207
Query: 415 RCRDERVHLDWQLLPHAAHQRLLGRHVLGKIQDDDSLPLALHRWDA 552
CR+ ++LDWQLLPH +++ LLGRH+LG IQDD SLPL LHRWDA
Sbjct: 208 GCREGCLYLDWQLLPHTSYRSLLGRHILGSIQDDSSLPLGLHRWDA 345
>gb|CN140896.1|CN140896 OX1_47_G09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_47_G09_A002 5', mRNA sequence
Length = 692
Score = 187 bits (403), Expect(2) = 1e-047
Identities = 73/107 (68%), Positives = 87/107 (81%)
Frame = +2 / +2
Query: 233 SRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETN 412
S +T DGT+DIN QRA K+STGNWRACF ILG EF EC+A YA KNLV+YLT L E+N
Sbjct: 278 SEFTCDGTVDINNQRAPKRSTGNWRACFFILGAEFTECVAVYAITKNLVSYLTGVLHESN 457
Query: 413 IDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
+DAAT VSTWIG+ + TPLI AFLADT+WGRY T++VFL +Y +GML
Sbjct: 458 VDAATTVSTWIGTSFFTPLIGAFLADTFWGRYWTVVVFLSVYAIGML 598
Score = 144 bits (309), Expect(2) = 7e-036
Identities = 70/110 (63%), Positives = 83/110 (75%)
Frame = -3 / -3
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SIP *++RKT V Y PQ VSAKKA MSGV+ ++PIQVDT VAAS L+S + VR*+T+
Sbjct: 597 SIPIA*TERKTTTVQYRPQNVSAKKAPMSGVKNEVPIQVDTVVAASTLLSWRTPVR*LTK 418
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEAS 223
FF +A* A HS NS P+I KHALQFPVL F AR LLIS+VPS V E +S
Sbjct: 417 FFVIA*TATHSVNSAPKIKKHALQFPVLRFGARWLLISTVPSQVNSEHSS 268
Score = 105 bits (225), Expect(2) = 3e-024
Identities = 51/104 (49%), Positives = 66/104 (63%)
Frame = -2 / -2
Query: 553 KHPNDVEQEEDYHRLVSSPVRVGQEGADERREVAAANPGGHVRRGIDVGLTKLSREVGDQ 374
+HPN V +EED++ +SSP V E ++ER E +A+PGGH R IDV L + + EV DQ
Sbjct: 598 EHPNCVNREEDHNCPISSPECVS*ESSNERCEE*SADPGGHGCRSIDVALVEDTSEVADQ 419
Query: 373 VLCGRVKCQAFGELGTQNHEACSPVPGALLQSTLLVDIERSVAS 242
VLC V F E T N EAC PVP A L+STL+V+I + S
Sbjct: 418 VLCDCVDGHTFSEFST*NKEACPPVPRAPLRSTLVVNINCPITS 287
Score = 27.2 bits (53), Expect(2) = 7e-036
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 221 HPLEPGTESVASPHLQLP 168
HP+ ESVASPHL P
Sbjct: 272 HPVWARDESVASPHLVYP 219
Score = 26.3 bits (51), Expect(2) = 3e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 220 ILWSQVLNQWPLLI 179
IL Q +NQWPLLI
Sbjct: 271 ILCGQGMNQWPLLI 230
Score = 23.5 bits (45), Expect(2) = 1e-047
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 179 DEERPLIQYLAPEDD 223
DEERPLI L +D+
Sbjct: 230 DEERPLIHPLPTQDE 274
>gb|CD427306.1|CD427306 SA1_18_G02.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_G02_A002 5', mRNA sequence
Length = 632
Score = 188 bits (405), Expect = 6e-047
Identities = 77/127 (60%), Positives = 94/127 (74%)
Frame = +2 / +2
Query: 173 AADEERPLIQYLAPEDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLA 352
AADEE L+ +L P +S Y SDG++DINKQ ALK STGNWRAC+ ILG F+EC+
Sbjct: 209 AADEENALLLHLQPTPQAVASEYASDGSVDINKQPALKHSTGNWRACYTILGVGFSECMV 388
Query: 353 FYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLL 532
F A A NLVT LT L E+ +DAA N+S+W G CYLTPL+ AF+AD+Y GRY TM+VFL
Sbjct: 389 FSAIATNLVTLLTTVLHESKVDAARNISSWAGVCYLTPLLGAFVADSYLGRYWTMVVFLP 568
Query: 533 LYIVGML 553
+YIV ML
Sbjct: 569 VYIVAML 589
Score = 122 bits (262), Expect = 3e-027
Identities = 61/116 (52%), Positives = 77/116 (66%)
Frame = -3 / -3
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SI TM*+ R T +V YLP+ +SA KA SGVR* P Q + F+AAS L+S S+ V VT+
Sbjct: 588 SIATM*TGRNTTMVQYLPK*LSATKAPRSGVR*HTPAQEEIFLAASTLLSWSTVVSKVTK 409
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEASSSSGAR 205
F A+A N HS N P+++ HALQFPVL RA CLL+S+ PSL Y E + G R
Sbjct: 408 FVAIAENTMHSLNPTPKMV*HALQFPVLCLRAGCLLMSTDPSLAYSEATACGVGWR 241
>gb|CF433825.1|CF433825 NIT1_30_H09.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_30_H09_A002 5', mRNA sequence
Length = 697
Score = 188 bits (405), Expect = 6e-047
Identities = 77/127 (60%), Positives = 94/127 (74%)
Frame = +2 / +3
Query: 173 AADEERPLIQYLAPEDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLA 352
AADEE L+ +L P +S Y SDG++DINKQ ALK STGNWRAC+ ILG F+EC+
Sbjct: 186 AADEENALLLHLQPTPQAVASEYASDGSVDINKQPALKHSTGNWRACYTILGVGFSECMV 365
Query: 353 FYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLL 532
F A A NLVT LT L E+ +DAA N+S+W G CYLTPL+ AF+AD+Y GRY TM+VFL
Sbjct: 366 FSAIATNLVTLLTTVLHESKVDAARNISSWAGVCYLTPLLGAFVADSYLGRYWTMVVFLP 545
Query: 533 LYIVGML 553
+YIV ML
Sbjct: 546 VYIVAML 566
Score = 122 bits (262), Expect = 3e-027
Identities = 61/116 (52%), Positives = 77/116 (66%)
Frame = -3 / -1
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SI TM*+ R T +V YLP+ +SA KA SGVR* P Q + F+AAS L+S S+ V VT+
Sbjct: 565 SIATM*TGRNTTMVQYLPK*LSATKAPRSGVR*HTPAQEEIFLAASTLLSWSTVVSKVTK 386
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEASSSSGAR 205
F A+A N HS N P+++ HALQFPVL RA CLL+S+ PSL Y E + G R
Sbjct: 385 FVAIAENTMHSLNPTPKMV*HALQFPVLCLRAGCLLMSTDPSLAYSEATACGVGWR 218
>gb|CD231785.1|CD231785 SS1_23_E05.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_E05_A012 5', mRNA sequence
Length = 634
Score = 187 bits (403), Expect = 1e-046
Identities = 77/127 (60%), Positives = 94/127 (74%)
Frame = +2 / +3
Query: 173 AADEERPLIQYLAPEDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLA 352
AADEE L+ +L P +S Y SDG++DINKQ ALK STGNWRAC+ ILG F+EC+
Sbjct: 105 AADEENALLLHLQPTPQAVASGYASDGSVDINKQPALKHSTGNWRACYTILGVGFSECMV 284
Query: 353 FYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLL 532
F A A NLVT LT L E+ +DAA N+S+W G CYLTPL+ AF+AD+Y GRY TM+VFL
Sbjct: 285 FSAIATNLVTLLTTVLHESKVDAARNISSWAGVCYLTPLLGAFVADSYLGRYWTMVVFLP 464
Query: 533 LYIVGML 553
+YIV ML
Sbjct: 465 VYIVAML 485
Score = 122 bits (261), Expect = 4e-027
Identities = 61/116 (52%), Positives = 77/116 (66%)
Frame = -3 / -1
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SI TM*+ R T +V YLP+ +SA KA SGVR* P Q + F+AAS L+S S+ V VT+
Sbjct: 484 SIATM*TGRNTTMVQYLPK*LSATKAPRSGVR*HTPAQEEIFLAASTLLSWSTVVSKVTK 305
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEASSSSGAR 205
F A+A N HS N P+++ HALQFPVL RA CLL+S+ PSL Y E + G R
Sbjct: 304 FVAIAENTMHSLNPTPKMV*HALQFPVLCLRAGCLLMSTDPSLAYPEATACGVGWR 137
>gb|CF761849.1|CF761849 DSAF1_82_F02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_82_F02_A011 5', mRNA sequence
Length = 616
Score = 177 bits (382), Expect(2) = 9e-046
Identities = 70/110 (63%), Positives = 86/110 (78%)
Frame = +2 / +3
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
+ SS +T DGT+DIN QRA K+STGNWRACF I+ EFAEC++ KNLV+YLT L
Sbjct: 204 DESSEFTCDGTVDINNQRAPKRSTGNWRACFFIISAEFAECVSVNGIRKNLVSYLTGVLH 383
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
E+N+DAAT VSTW G+ + TPLI AFLADT+WGRY T++VFL +Y VGML
Sbjct: 384 ESNVDAATTVSTWSGTSFFTPLIGAFLADTFWGRYWTIVVFLSVYAVGML 533
Score = 126 bits (270), Expect(2) = 8e-032
Identities = 65/110 (59%), Positives = 79/110 (71%)
Frame = -3 / -1
Query: 552 SIPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTR 373
SIPT *++RKT IV Y PQ VSAKKA MSGV+ ++P+QVDT VAAS L+S + VR*+T+
Sbjct: 532 SIPTA*TERKTTIVQYRPQNVSAKKAPMSGVKNEVPLQVDTVVAASTLLSWRTPVR*LTK 353
Query: 372 FFAVA*NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEAS 223
FF + HSANS I K ALQFPVL AR LL+S+VPS V E +S
Sbjct: 352 FFLIPLTDTHSANSALIIKKQALQFPVLRLGARWLLMSTVPSQVNSELSS 203
Score = 105 bits (223), Expect(2) = 4e-025
Identities = 50/104 (48%), Positives = 65/104 (62%)
Frame = -2 / -3
Query: 553 KHPNDVEQEEDYHRLVSSPVRVGQEGADERREVAAANPGGHVRRGIDVGLTKLSREVGDQ 374
+HPN V +EED++ +SSP RV E +DER E +A PGGH R IDV L + + EV DQ
Sbjct: 533 EHPNCVNREEDHYCPISSPERVS*ESSDERCEERSAAPGGHGCRSIDVALVEDTSEVTDQ 354
Query: 373 VLCGRVKCQAFGELGTQNHEACSPVPGALLQSTLLVDIERSVAS 242
VL V F E T N EA P+P A L+STL+V++ +AS
Sbjct: 353 VLSDSVNGHTFSEFSTYNKEAGPPIPRAPLRSTLVVNVNCPIAS 222
Score = 31.3 bits (62), Expect(2) = 8e-032
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 220 ILWSQVLNQWPLLI 179
IL SQV+NQWPLLI
Sbjct: 206 ILCSQVMNQWPLLI 165
Score = 30.4 bits (60), Expect(2) = 4e-025
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 221 HPLEPGTESVASPHLQLP 168
HP+ G ESVASPHL P
Sbjct: 207 HPV*SGDESVASPHLVYP 154
Score = 26.7 bits (52), Expect(2) = 9e-046
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 179 DEERPLIQYLAPEDDEA 229
DEERPLI +L +D+ +
Sbjct: 165 DEERPLIHHLTTQDESS 215
>gb|CD425497.1|CD425497 SA1_12_E01.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_12_E01_A002 5', mRNA sequence
Length = 621
Score = 162 bits (349), Expect(2) = 3e-043
Identities = 65/111 (58%), Positives = 81/111 (72%)
Frame = +2 / +2
Query: 173 AADEERPLIQYLAPEDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLA 352
AADEE L+ +L P +S Y SDG++DINKQ ALK STGNWRAC+ ILG F+EC+
Sbjct: 197 AADEENALLLHLQPTPQAVASEYASDGSVDINKQPALKHSTGNWRACYTILGVGFSECMV 376
Query: 353 FYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
F A A NLVT LT L E+ +DAA N+S+W G CYLTPL+ AF+AD+Y G+
Sbjct: 377 FSAIATNLVTLLTTVLHESKVDAARNISSWAGVCYLTPLLGAFVADSYLGK 529
Score = 104 bits (222), Expect = 1e-021
Identities = 51/99 (51%), Positives = 65/99 (65%)
Frame = -3 / -1
Query: 501 PQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA*NARHSANSVPR 322
P+ +SA KA SGVR* P Q + F+AAS L+S S+ V VT+F A+A N HS N P+
Sbjct: 525 PK*LSATKAPRSGVR*HTPAQEEIFLAASTLLSWSTVVSKVTKFVAIAENTMHSLNPTPK 346
Query: 321 IMKHALQFPVLFFRARCLLISSVPSLVYREEASSSSGAR 205
++ HALQFPVL RA CLL+S+ PSL Y E + G R
Sbjct: 345 MV*HALQFPVLCLRAGCLLMSTDPSLAYSEATACGVGWR 229
Score = 33.6 bits (67), Expect(2) = 3e-043
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 497 WGRYKTMIVFLLLYIVGML 553
W RY TM+VFL +YIV ML
Sbjct: 522 WERYWTMVVFLPVYIVAML 578
>gb|CF428787.1|CF428787 PH1_17_E09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_E09_A002 5', mRNA sequence
Length = 693
Score = 174 bits (374), Expect = 1e-042
Identities = 66/103 (64%), Positives = 85/103 (82%)
Frame = +2 / +3
Query: 233 SRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETN 412
S +TSDGT+DI+ A K+STGNW ACF ILG EFAEC+AF+A +KNLVTYLT L E+N
Sbjct: 114 SEFTSDGTVDISNLPARKQSTGNWTACFFILGAEFAECVAFFAISKNLVTYLTGVLHESN 293
Query: 413 IDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYI 541
+DAAT VSTWIG+ + TPLI AFLADT+WGR+ T+++F+ +Y+
Sbjct: 294 VDAATTVSTWIGTAFFTPLIGAFLADTFWGRHWTIVIFISVYV 422
Score = 124 bits (265), Expect = 1e-027
Identities = 63/104 (60%), Positives = 75/104 (72%)
Frame = -3 / -3
Query: 534 SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA* 355
++ K IV PQ VSAK A MSGV+ +PIQVDT VAAS L+S + VR*VT+FF +A
Sbjct: 415 TEMKITIVQCRPQNVSAKNAPMSGVKNAVPIQVDTVVAASTLLSWRTPVR*VTKFFEIAK 236
Query: 354 NARHSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEAS 223
A HSANS P+I KHA+QFPVL F A LLIS+VPSLV E +S
Sbjct: 235 KATHSANSAPKIKKHAVQFPVLCFLAGRLLISTVPSLVNSEISS 104
Score = 110 bits (235), Expect = 2e-023
Identities = 52/102 (50%), Positives = 62/102 (60%)
Frame = -2 / -2
Query: 547 PNDVEQEEDYHRLVSSPVRVGQEGADERREVAAANPGGHVRRGIDVGLTKLSREVGDQVL 368
P+DV +EDY+ VSSP V QE +DERRE NPGGH R IDV L + +REV DQVL
Sbjct: 428 PSDVHGDEDYYCPVSSPECVSQERSDERREECGPNPGGHSRCSIDVALVENTREVSDQVL 249
Query: 367 CGRVKCQAFGELGTQNHEACSPVPGALLQSTLLVDIERSVAS 242
+ F E T N EAC P+P ALL + +I R VAS
Sbjct: 248 *DCEEGHTFSEFST*NKEACCPIPSALLPGRQIANINRPVAS 123
>gb|CW369347.1|CW369347 fsbb001f043l13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f043l13, DNA
sequence
Length = 782
Score = 139 bits (298), Expect(2) = 7e-039
Identities = 54/76 (71%), Positives = 66/76 (86%)
Frame = +2 / +2
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++LGTEF E LAF+A +KNL+TYL +EL E N+DAA +VSTWIGSC+LTPLI AFLADTY
Sbjct: 410 VLLGTEFTESLAFFAISKNLITYLMSELHERNVDAARDVSTWIGSCFLTPLIGAFLADTY 589
Query: 497 WGRYKTMIVFLLLYIV 544
WG YKT++VFLL+Y V
Sbjct: 590 WGAYKTIVVFLLVYTV 637
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1 / +1
Query: 328 YRVRRMPGILRDRKEPGHLPHG*AW*DQHRCRDERVHLDWQLLPHAAHQRLLGRHVLGKI 507
YRV +PGI R KEP HL H *A Q CR+ ++LDWQLLPH +++ LLGRH+LG I
Sbjct: 421 YRVHGIPGIFRYIKEPNHLSHE*APRAQCGCREGCLYLDWQLLPHTSYRSLLGRHILGSI 600
Query: 508 QDDDSLPLALHR 543
QDD SLPL LHR
Sbjct: 601 QDDSSLPLGLHR 636
Score = 103 bits (220), Expect(2) = 7e-031
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = -3 / -3
Query: 549 IPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRF 370
+ T+*+KRKT IVLY PQYVSAKKA + GVR QLPIQV+T +AAS L S SS +R*V RF
Sbjct: 642 LTTV*TKRKTTIVLYAPQYVSAKKAPIRGVRKQLPIQVETSLAASTLRSWSSLMR*VIRF 463
Query: 369 FAVA*NARHSANSVP 325
F +A NAR S NSVP
Sbjct: 462 FDIAKNARDSVNSVP 418
Score = 51.0 bits (105), Expect(2) = 7e-031
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = -2 / -3
Query: 328 TQNHEACSPVPGALLQSTLLVDIERSVASV 239
T N+EACSP+P ALLQS L+V+++RSVAS+
Sbjct: 315 T*NNEACSPIPDALLQSRLIVNVKRSVASI 226
Score = 42.3 bits (86), Expect(2) = 7e-039
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 235 TIH*RRNARYQQAACSEEEHRELESMLH 318
TI+*RRNA ++AC E HRELESMLH
Sbjct: 222 TIY*RRNA*R*RSACFEAAHRELESMLH 305
Score = 39.6 bits (80), Expect(2) = 7e-028
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / +2
Query: 234 HDTLATERSISTSSVL*RRAPGTGEHAS*FWVPSSPN 344
H+ LATER T S+L* A G GEHAS F V S+ N
Sbjct: 221 HNILATERLTLTISLL*SSASGIGEHASLF*VGSACN 331
>gb|CW364277.1|CW364277 fsbb001f036e02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f036e02, DNA
sequence
Length = 674
Score = 116 bits (247), Expect(2) = 2e-038
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +2 / -2
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
M LG EF EC+AF+ +KNLVTYLTA L E+ + AA N+S W+G+C+ TPL F+ADTY
Sbjct: 238 MDLGVEFCECMAFFTISKNLVTYLTAVLHESKVTAARNMSAWVGACFFTPLFGGFIADTY 59
Query: 497 WGRYKTMIVFLLLY 538
WGRY T++ F LY
Sbjct: 58 WGRYWTIVGFFPLY 17
Score = 78.0 bits (164), Expect(2) = 7e-024
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = -3 / +3
Query: 537 *SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA 358
*S +K IV YLPQ VSA K SGV+ Q P Q D F+AA L+S +AVR*VT+FF +
Sbjct: 18 *SGKKPTIVQYLPQ*VSAMKPPKSGVKKQAPTQADIFLAAVTLLSWRTAVR*VTKFFEIV 197
Query: 357 *NARHSANSVPRIM 316
A HS NS P+ M
Sbjct: 198 KKAMHSQNSTPKSM 239
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2 / -3
Query: 230 SSRYTSDGTLDINKQRALKKSTGNWRACFMILGT 331
+S YT DG++DINKQ ALK STG WRACF+ILGT
Sbjct: 672 TSEYTRDGSVDINKQPALKHSTGKWRACFLILGT 571
Score = 54.7 bits (113), Expect(2) = 7e-024
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 330 VPRIMKHALQFPVLFFRARCLLISSVPSLVYRE 232
VP++ KHAL FPVL RA CLLIS+ PSLVY E
Sbjct: 572 VPKMRKHALHFPVLCLRAGCLLISTDPSLVYSE 670
>gb|CW262804.1|CW262804 104_730_11230283_116_35223_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230283, DNA
sequence
Length = 633
Score = 134 bits (287), Expect(2) = 2e-037
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +2 / +1
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++LGTEF E LAF+A +KNL+TYL +EL E N+DAA +VSTWIGSC+LTPLI AFLADTY
Sbjct: 418 VLLGTEFTESLAFFAISKNLITYLMSELHERNVDAARDVSTWIGSCFLTPLIGAFLADTY 597
Query: 497 WGRYKTMIVFLL 532
WG YKT++VFLL
Sbjct: 598 WGAYKTIVVFLL 633
Score = 99.6 bits (211), Expect(2) = 1e-029
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = -3 / -2
Query: 531 KRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA*N 352
KRKT IVLY PQYVSAKKA + GVR QLPIQV+T +AAS L S SS +R*V RFF +A N
Sbjct: 632 KRKTTIVLYAPQYVSAKKAPIRGVRKQLPIQVETSLAASTLRSWSSLMR*VIRFFDIAKN 453
Query: 351 ARHSANSVP 325
AR S NSVP
Sbjct: 452 ARDSVNSVP 426
Score = 97.3 bits (206), Expect(2) = 2e-025
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +1 / +3
Query: 328 YRVRRMPGILRDRKEPGHLPHG*AW*DQHRCRDERVHLDWQLLPHAAHQRLLGRHVLGKI 507
YRV +PGI R KEP HL H *A Q CR+ ++LDWQLLPH +++ LLGRH+LG I
Sbjct: 429 YRVHGIPGIFRYIKEPNHLSHE*APRAQCGCREGCLYLDWQLLPHTSYRSLLGRHILGSI 608
Query: 508 QDDDSLPL 531
QDD SLPL
Sbjct: 609 QDDSSLPL 632
Score = 51.0 bits (105), Expect(2) = 1e-029
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = -2 / -2
Query: 328 TQNHEACSPVPGALLQSTLLVDIERSVASV 239
T N+EACSP+P ALLQS L+V+++RSVAS+
Sbjct: 323 T*NNEACSPIPDALLQSRLIVNVKRSVASI 234
Score = 42.3 bits (86), Expect(2) = 2e-037
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 235 TIH*RRNARYQQAACSEEEHRELESMLH 318
TI+*RRNA ++AC E HRELESMLH
Sbjct: 230 TIY*RRNA*R*RSACFEAAHRELESMLH 313
Score = 39.6 bits (80), Expect(2) = 2e-025
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / +1
Query: 234 HDTLATERSISTSSVL*RRAPGTGEHAS*FWVPSSPN 344
H+ LATER T S+L* A G GEHAS F V S+ N
Sbjct: 229 HNILATERLTLTISLL*SSASGIGEHASLF*VGSACN 339
>gb|CX617759.1|CX617759 GABR1_35_D02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_35_D02_A002 5', mRNA sequence
Length = 780
Score = 154 bits (330), Expect = 1e-036
Identities = 61/117 (52%), Positives = 82/117 (70%)
Frame = +2 / +2
Query: 194 LIQYLAPEDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKN 373
L++ P +D A + YT DG++D LK +TGNWRAC +ILGTE E LA+Y +K+
Sbjct: 230 LLRATEPPEDLAVAGYTGDGSVDFRGFPILKHNTGNWRACSLILGTEICERLAYYGISKS 409
Query: 374 LVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIV 544
LVTYL+ L E N+ AA N +TW G+CYLTPLI A LAD+YWG+Y+T+ VF +Y +
Sbjct: 410 LVTYLSTRLHEGNVSAARNFTTWQGTCYLTPLIGATLADSYWGKYRTIAVFSTIYFL 580
Score = 109 bits (232), Expect = 4e-023
Identities = 59/106 (55%), Positives = 69/106 (65%)
Frame = -3 / -1
Query: 525 KTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA*NAR 346
KT IVLY PQY SAK A +SGVR*Q+P QV F+AA S S R*VT+ F + * A+
Sbjct: 561 KTAIVLYFPQYESAKVAPISGVR*QVPCQVVKFLAAETFPSCSLVER*VTKLFEIP**AK 382
Query: 345 HSANSVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEASSSSGA 208
S SVPRI +HALQFPVL F+ L S+ PS VY A SS G+
Sbjct: 381 RSHISVPRINEHALQFPVLCFKIGKPLKSTDPSPVYPATARSSGGS 244
>gb|CW108986.1|CW108986 104_480_11097816_116_34494_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11097816, DNA
sequence
Length = 505
Score = 139 bits (298), Expect(2) = 7e-036
Identities = 54/76 (71%), Positives = 66/76 (86%)
Frame = +2 / +2
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++LGTEF E LAF+A +KNL+TYL +EL E N+DAA +VSTWIGSC+LTPLI AFLADTY
Sbjct: 173 VLLGTEFTESLAFFAISKNLITYLMSELHERNVDAARDVSTWIGSCFLTPLIGAFLADTY 352
Query: 497 WGRYKTMIVFLLLYIV 544
WG YKT++VFLL+Y V
Sbjct: 353 WGAYKTIVVFLLVYTV 400
Score = 105 bits (223), Expect = 7e-022
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1 / +1
Query: 328 YRVRRMPGILRDRKEPGHLPHG*AW*DQHRCRDERVHLDWQLLPHAAHQRLLGRHVLGKI 507
YRV +PGI R KEP HL H *A Q CR+ ++LDWQLLPH +++ LLGRH+LG I
Sbjct: 184 YRVHGIPGIFRYIKEPNHLSHE*APRAQCGCREGCLYLDWQLLPHTSYRSLLGRHILGSI 363
Query: 508 QDDDSLPLALHR 543
QDD SLPL LHR
Sbjct: 364 QDDSSLPLGLHR 399
Score = 103 bits (220), Expect(2) = 8e-029
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = -3 / -2
Query: 549 IPTM*SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRF 370
+ T+*+KRKT IVLY PQYVSAKKA + GVR QLPIQV+T +AAS L S SS +R*V RF
Sbjct: 405 LTTV*TKRKTTIVLYAPQYVSAKKAPIRGVRKQLPIQVETSLAASTLRSWSSLMR*VIRF 226
Query: 369 FAVA*NARHSANSVP 325
F +A NAR S NSVP
Sbjct: 225 FDIAKNARDSVNSVP 181
Score = 44.1 bits (90), Expect(2) = 8e-029
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / -2
Query: 328 TQNHEACSPVPGALLQSTLLVDIERS 251
T N+EACSP+P ALLQS L+V+++RS
Sbjct: 78 T*NNEACSPIPDALLQSRLIVNVKRS 1
Score = 32.2 bits (64), Expect(2) = 7e-036
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 268 QAACSEEEHRELESMLH 318
++AC E HRELESMLH
Sbjct: 18 RSACFEAAHRELESMLH 68
>gb|CW150914.1|CW150914 104_551_11143663_148_36312_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143663, DNA
sequence
Length = 659
Score = 102 bits (218), Expect(2) = 4e-035
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
M LG EF EC+AF+ +KNLVTYLTA L E+ + AA N+S W+G+C+ TPL F+ADTY
Sbjct: 472 MDLGVEFCECMAFFTISKNLVTYLTAVLPESKVTAARNMSAWVGACFFTPLFGGFIADTY 651
Query: 497 WG 502
WG
Sbjct: 652 WG 657
Score = 69.3 bits (145), Expect(2) = 1e-021
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = -3 / -1
Query: 504 LPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA*NARHSANSVP 325
LPQ VSA K SGV+ Q P Q D F+AA L+S +AVR*VT+FF + A HS NS P
Sbjct: 659 LPQ*VSAMKPPKSGVKKQAPTQADIFLAAVTLLSGRTAVR*VTKFFEIVKKAMHSQNSTP 480
Query: 324 RIM 316
+ M
Sbjct: 479 KSM 471
Score = 67.5 bits (141), Expect(2) = 4e-035
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +2 / +2
Query: 227 ASSRYTSDGTLDINKQRALKKSTGNWRACFMILGT 331
A+S YT DG++DINKQ ALK STG WRACF+ILGT
Sbjct: 35 ATSEYTRDGSVDINKQPALKHSTGKWRACFLILGT 139
Score = 55.6 bits (115), Expect(2) = 1e-021
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -3
Query: 330 VPRIMKHALQFPVLFFRARCLLISSVPSLVYREEA 226
VP++ KHAL FPVL RA CLLIS+ PSLVY E A
Sbjct: 138 VPKMRKHALHFPVLCLRAGCLLISTDPSLVYSEVA 34
>gb|BI140911.1|BI140911 IP1_40_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 148 bits (318), Expect = 6e-035
Identities = 58/129 (44%), Positives = 87/129 (67%)
Frame = +2 / +3
Query: 167 EAAADEERPLIQYLAPEDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAEC 346
EA PL+ L + +YT +G++DI RA K+ TGNWRAC+ ILG EF
Sbjct: 75 EAEESSLLPLLPLLHGTPSQDYEQYTCNGSVDIRGNRASKRHTGNWRACYSILGGEFCGA 254
Query: 347 LAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVF 526
+A+Y NLV+Y+T ++N+ AA+N++ W G+CYLTPL+ AFLAD+Y GR++T++V
Sbjct: 255 MAYYGVGTNLVSYMTKVQKQSNVAAASNIAFWQGTCYLTPLLGAFLADSYLGRHRTILVS 434
Query: 527 LLLYIVGML 553
L+++ +GML
Sbjct: 435 LMIFTMGML 461
>gb|BG948036.1|BG948036 IP1_8_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 618
Score = 148 bits (317), Expect = 8e-035
Identities = 57/104 (54%), Positives = 77/104 (74%)
Frame = +2 / +3
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT DG++D+ ALK +TGNW+ACF ILG E E LA+Y AKNLVTYL +L N++
Sbjct: 189 YTGDGSVDVKGCPALKGTTGNWKACFFILGNECCERLAYYGIAKNLVTYLKVKLHLGNLE 368
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
AA +V+TW G+CYLTPL+ A LAD++WG+Y T+ VF +Y +G+
Sbjct: 369 AARHVTTWQGTCYLTPLVGAILADSHWGKYWTIAVFSSVYFIGL 500
>gb|CL190792.1|CL190792 104_409_10906327_116_32496_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906327, DNA
sequence
Length = 741
Score = 128 bits (275), Expect(2) = 9e-035
Identities = 47/73 (64%), Positives = 62/73 (84%)
Frame = +2 / +1
Query: 326 GTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
G EFAEC+AF+A +KNLVTYLT L E+N+DAAT VSTWIG+ + TPLI AFLADT+WGR
Sbjct: 403 GAEFAECVAFFAISKNLVTYLTGVLHESNVDAATTVSTWIGTAFFTPLIGAFLADTFWGR 582
Query: 506 YKTMIVFLLLYIV 544
Y T+++F+ +Y++
Sbjct: 583 YWTIVIFISVYVI 621
Score = 85.4 bits (180), Expect(2) = 4e-025
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = -3 / -2
Query: 534 SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA* 355
++ K IV Y PQ VSAK A MSGV+ +PIQVDT VAAS L+S + VR*VT+FF +A
Sbjct: 611 TEMKITIVQYRPQNVSAKNAPMSGVKNAVPIQVDTVVAASTLLSWRTPVR*VTKFFEIAK 432
Query: 354 NARHSANSVP 325
A HSANS P
Sbjct: 431 KATHSANSAP 402
Score = 81.7 bits (172), Expect(2) = 3e-026
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +1 / +3
Query: 334 VRRMPGILRDRKEPGHLPHG*AW*DQHRCRDERVHLDWQLLPHAAHQRLLGRHVLGKIQD 513
+R M G+LR+ KE GHLPHG + +Q RC ++ VHLDW + HAAH+ +LG H+LG I D
Sbjct: 411 IR*MCGLLRNLKELGHLPHGCSPREQRRCCNDCVHLDWDRILHAAHRSVLG*HILGTILD 590
Query: 514 DDSLPL 531
+ +L L
Sbjct: 591 NSNLHL 608
Score = 59.3 bits (123), Expect(2) = 3e-026
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / +1
Query: 233 SRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFY 358
S +TSDGT+DI+ A K+STGNW ACF ILGT + L ++
Sbjct: 127 SEFTSDGTVDISNLPARKQSTGNWTACFFILGTAIQQELLYF 252
Score = 51.5 bits (106), Expect(2) = 4e-025
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -3 / -2
Query: 333 SVPRIMKHALQFPVLFFRARCLLISSVPSLVYREEAS 223
+VP+I KHA+QFPVL F A LLIS+VPSLV E +S
Sbjct: 227 AVPKIKKHAVQFPVLCFLAGRLLISTVPSLVNSEISS 117
Score = 40.5 bits (82), Expect(2) = 9e-035
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +3
Query: 238 IH*RRNARYQQAACSEEEHRELESMLHDSGYR 333
IH*RR+ Y Q+AC E EH EL+SML YR
Sbjct: 132 IH*RRDG*Y*QSACQEAEHWELDSMLLYFRYR 227
>gb|CF485636.1|CF485636 POL1_32_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_E07_A002 5', mRNA sequence
Length = 530
Score = 144 bits (310), Expect = 7e-034
Identities = 57/109 (52%), Positives = 77/109 (70%)
Frame = +2 / +2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + YT DG++D+ ALK +TGNW+ACF ILG E E LA+Y AKNLVTYL +L
Sbjct: 146 EDAGLYTGDGSVDVKGCPALKGTTGNWKACFFILGNECCERLAYYGIAKNLVTYLKVKLH 325
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
N++AA +V+TW G+CYLTPL+ A LAD+ WG+Y T+ F +Y +G+
Sbjct: 326 LGNLEAARHVTTWQGTCYLTPLVGAILADSPWGKYWTIAAFSSVYFIGL 472
>gb|AW924370.1|AW924370 WS1_69_G04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 537
Score = 143 bits (306), Expect = 3e-033
Identities = 56/104 (53%), Positives = 72/104 (69%)
Frame = +2 / +2
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT DG++D + +K++TG W+AC ILG E E LA+Y + NLVTYLT +L N
Sbjct: 182 YTGDGSVDFSGNPVVKETTGRWKACPFILGNECCERLAYYGISTNLVTYLTKKLHAGNAS 361
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
AA+NV+TW G+CYLTPLI A LAD YWGRY T+ F +Y +GM
Sbjct: 362 AASNVTTWQGTCYLTPLIGAILADAYWGRYWTIATFSTVYFIGM 493
>gb|BM323397.1|BM323397 PIC1_18_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 571
Score = 143 bits (306), Expect = 3e-033
Identities = 56/104 (53%), Positives = 72/104 (69%)
Frame = +2 / +3
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT DG++D + +K++TG W+AC ILG E E LA+Y + NLVTYLT +L N
Sbjct: 48 YTGDGSVDFSGNPVVKETTGRWKACPFILGNECCERLAYYGISTNLVTYLTKKLHAGNAS 227
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
AA+NV+TW G+CYLTPLI A LAD YWGRY T+ F +Y +GM
Sbjct: 228 AASNVTTWQGTCYLTPLIGAILADAYWGRYWTIATFSTVYFIGM 359
>gb|CN127353.1|CN127353 RHOH1_22_B10.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_B10_A002 5', mRNA sequence
Length = 812
Score = 143 bits (306), Expect = 3e-033
Identities = 56/104 (53%), Positives = 72/104 (69%)
Frame = +2 / +1
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT DG++D + +K++TG W+AC ILG E E LA+Y + NLVTYLT +L N
Sbjct: 355 YTGDGSVDFSGNPVVKETTGRWKACPFILGNECCERLAYYGISTNLVTYLTKKLHAGNAS 534
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
AA+NV+TW G+CYLTPLI A LAD YWGRY T+ F +Y +GM
Sbjct: 535 AASNVTTWQGTCYLTPLIGAILADAYWGRYWTIATFSTVYFIGM 666
>gb|CD429264.1|CD429264 ETH1_3_B01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_B01_A002 5', mRNA sequence
Length = 521
Score = 142 bits (304), Expect = 5e-033
Identities = 56/104 (53%), Positives = 71/104 (68%)
Frame = +2 / +2
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT DG++D + +K++TG W+AC ILG E E LA+Y + NLVTYLT +L N
Sbjct: 194 YTGDGSVDFSGNPVVKETTGRWKACPFILGNECCERLAYYGISTNLVTYLTKKLHAGNAS 373
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
AA+NV+TW G+CYLTPLI A LAD YWGRY T+ F Y +GM
Sbjct: 374 AASNVTTWQGTCYLTPLIGAILADAYWGRYWTIATFSTXYFIGM 505
>gb|CD222700.1|CD222700 CCC1_23_E04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_23_E04_A007 5', mRNA sequence
Length = 661
Score = 137 bits (294), Expect = 1e-031
Identities = 55/109 (50%), Positives = 71/109 (65%)
Frame = +2 / +1
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + YT DGT+D ALKK TGNWRAC IL E E LA+Y + NLV Y+ LG
Sbjct: 235 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILANECCERLAYYGMSTNLVHYMKTRLG 414
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ N A+ NV+ W G+CY+TPLI AF AD Y GR+ T+ F+++YI G+
Sbjct: 415 QVNSVASNNVTNWSGTCYITPLIGAFFADAYLGRFWTIASFMVIYIFGL 561
>gb|CD425816.1|CD425816 SA1_14_G10.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_14_G10_A002 5', mRNA sequence
Length = 614
Score = 137 bits (294), Expect = 1e-031
Identities = 55/109 (50%), Positives = 71/109 (65%)
Frame = +2 / +3
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + YT DGT+D ALKK TGNWRAC IL E E LA+Y + NLV Y+ LG
Sbjct: 261 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILANECCERLAYYGMSTNLVHYMKTRLG 440
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ N A+ NV+ W G+CY+TPLI AF AD Y GR+ T+ F+++YI G+
Sbjct: 441 QVNSVASNNVTNWSGTCYITPLIGAFFADAYLGRFWTIASFMVIYIFGL 587
>gb|CW308973.1|CW308973 104_797_11468951_148_35723_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468951, DNA
sequence
Length = 662
Score = 108 bits (231), Expect(2) = 8e-031
Identities = 41/75 (54%), Positives = 56/75 (74%)
Frame = +2 / -1
Query: 320 ILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYW 499
++GTE E LA+Y +K+LVTYL+ L E N+ AA N +TW G+CYLTPLI A LAD+YW
Sbjct: 260 MIGTEICERLAYYGISKSLVTYLSTRLHEGNVSAARNFTTWQGTCYLTPLIGATLADSYW 81
Query: 500 GRYKTMIVFLLLYIV 544
G+Y+T+ VF +Y +
Sbjct: 80 GKYRTIAVFSTIYFL 36
Score = 47.3 bits (97), Expect(2) = 8e-031
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -3
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILG 328
D A + YT DG++D LK +TGNWRAC +ILG
Sbjct: 657 DLAVAGYTGDGSVDFRGFPILKHNTGNWRACSLILG 550
>gb|CW231449.1|CW231449 104_680_11211126_148_37338_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211126, DNA
sequence
Length = 687
Score = 121 bits (258), Expect(2) = 7e-028
Identities = 48/77 (62%), Positives = 59/77 (76%)
Frame = +2 / -2
Query: 311 CFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLAD 490
C L EF E +AF+A AKNLVTYLT L E+N+DAAT VSTWIG+ + TPLI AFLAD
Sbjct: 248 CIS*LAGEFTESVAFFAIAKNLVTYLTGVLHESNVDAATTVSTWIGTSFFTPLIGAFLAD 69
Query: 491 TYWGRYKTMIVFLLLYI 541
T+WGRY T+ +FL +Y+
Sbjct: 68 TFWGRYWTIAIFLSVYV 18
Score = 96.4 bits (204), Expect(2) = 1e-030
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +1 / -1
Query: 349 GILRDRKEPGHLPHG*AW*DQHRCRDERVHLDWQLLPHAAHQRLLGRHVLGKIQDDDSLP 528
G+LRDRKE GHLPHG A +Q RC D+ VH+DW + HAAH+ +LGRH+LG I D+ +LP
Sbjct: 210 GLLRDRKELGHLPHGCAPREQRRCCDDCVHVDWDFILHAAHRSVLGRHILGTILDNSNLP 31
Query: 529 LAL 537
L +
Sbjct: 30 LRI 22
Score = 82.6 bits (174), Expect(3) = 2e-025
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = -3 / +1
Query: 534 SKRKTIIVLYLPQYVSAKKALMSGVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA* 355
++RK IV Y PQ VSAK A MSGV+ ++PI VDT VAAS L+S S+ VR*VT+FFA+A
Sbjct: 25 TERKIAIVQYRPQNVSAKNAPMSGVKNEVPIHVDTVVAASTLLSWSTPVR*VTKFFAIAK 204
Query: 354 NARHSANS 331
A S NS
Sbjct: 205 KATDSVNS 228
Score = 57.9 bits (120), Expect(2) = 1e-030
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2 / -2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFA 340
+ +S +TSDGT+DI+ A K+ TGNW+ACF I+GT A
Sbjct: 428 DETSEFTSDGTVDISNLPARKQRTGNWKACFFIIGTRIA 312
Score = 51.9 bits (107), Expect(3) = 2e-025
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = -3 / +1
Query: 330 VPRIMKHALQFPVLFFRARCLLISSVPSLVYREEAS 223
VP I KHA QFPVL FRA LLIS+VPSLV E +S
Sbjct: 322 VPIIKKHAFQFPVLCFRAGRLLISTVPSLVNSEVSS 429
Score = 23.5 bits (45), Expect(2) = 7e-028
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3 / -3
Query: 243 LATERSISTSSVL*RRAPGTGEHAS 317
LAT R I + +L R G G+HAS
Sbjct: 409 LATGRLILATCLLGSRELGIGKHAS 335
Score = 21.7 bits (41), Expect(3) = 2e-025
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 208 QVLNQWPLLI 179
Q ++QWPL+I
Sbjct: 579 QAMDQWPLII 608
>gb|CW368379.1|CW368379 fsbb001f042f04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042f04, DNA
sequence
Length = 600
Score = 129 bits (277), Expect = 3e-029
Identities = 52/103 (50%), Positives = 68/103 (66%)
Frame = +2 / +3
Query: 242 TSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDA 421
T DGT D + + A++ TG WRAC ILG E E LA+Y + NLV Y+ L + N A
Sbjct: 279 TLDGTTDHSGKPAVRSKTGTWRACPFILGNECCERLAYYGMSSNLVNYMIDRLHQGNAAA 458
Query: 422 ATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
A NVS W G+CY+ PL+ AFLAD Y GRY+T+ F+ LYI+G+
Sbjct: 459 ANNVSNWSGTCYVMPLLGAFLADAYLGRYRTIAAFMALYILGL 587
>gb|CW438144.1|CW438144 fsbb001f155j19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f155j19, DNA
sequence
Length = 690
Score = 83.1 bits (175), Expect(2) = 3e-029
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2 / -3
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFL 484
M LG EF EC+AF+ +KNLVTYLTA L E+ + AA N+S W+G+C+ TPL+ L
Sbjct: 199 MDLGVEFCECMAFFTISKNLVTYLTAVLHESKVTAARNMSAWVGACFFTPLLGVSL 32
Score = 67.5 bits (141), Expect(2) = 3e-029
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +2 / -1
Query: 227 ASSRYTSDGTLDINKQRALKKSTGNWRACFMILGT 331
A+S YT DG++DINKQ ALK STG WRACF+ILGT
Sbjct: 636 ATSEYTRDGSVDINKQPALKHSTGKWRACFLILGT 532
>gb|BM323720.1|BM323720 PIC1_22_E06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 574
Score = 129 bits (276), Expect = 4e-029
Identities = 51/89 (57%), Positives = 63/89 (70%)
Frame = +2 / +2
Query: 284 KKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLT 463
K++TG W+AC ILG E E LA+Y + NLVTYLT +L N AA+NV+TW G+CYLT
Sbjct: 11 KETTGRWKACPFILGNECCERLAYYGISTNLVTYLTKKLHAGNASAASNVTTWQGTCYLT 190
Query: 464 PLISAFLADTYWGRYKTMIVFLLLYIVGM 550
PLI A LAD YWGRY T+ F +Y +GM
Sbjct: 191 PLIGAILADAYWGRYWTIATFSTVYFIGM 277
>gb|CL190791.1|CL190791 104_409_10906327_114_32488_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906327, DNA
sequence
Length = 782
Score = 128 bits (275), Expect = 5e-029
Identities = 47/73 (64%), Positives = 62/73 (84%)
Frame = +2 / -1
Query: 326 GTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
G EFAEC+AF+A +KNLVTYLT L E+N+DAAT VSTWIG+ + TPLI AFLADT+WGR
Sbjct: 740 GAEFAECVAFFAISKNLVTYLTGVLHESNVDAATTVSTWIGTAFFTPLIGAFLADTFWGR 561
Query: 506 YKTMIVFLLLYIV 544
Y T+++F+ +Y++
Sbjct: 560 YWTIVIFISVYVI 522
>gb|CW024327.1|CW024327 104_164_10434894_5_30003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10434894, DNA
sequence
Length = 629
Score = 101 bits (216), Expect(2) = 1e-028
Identities = 36/73 (49%), Positives = 55/73 (75%)
Frame = +2 / +3
Query: 326 GTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
G EF LA+Y NLV+YLT ++N+ AA+N+++W G+CYLTPL+ AFLAD+YWGR
Sbjct: 276 GGEFCGSLAYYGVGTNLVSYLTKVRKQSNVTAASNIASWQGTCYLTPLLGAFLADSYWGR 455
Query: 506 YKTMIVFLLLYIV 544
++T++V L ++ +
Sbjct: 456 HRTIVVSLTIFTI 494
Score = 46.4 bits (95), Expect(2) = 1e-028
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTE 334
YT +G++DI A KK TG WRAC+ ILG +
Sbjct: 35 YTCNGSVDIKGNPASKKHTGKWRACYSILGNQ 130
>gb|CW272191.1|CW272191 104_744_11403330_116_36224_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403330, DNA
sequence
Length = 654
Score = 101 bits (216), Expect(2) = 2e-028
Identities = 36/73 (49%), Positives = 55/73 (75%)
Frame = +2 / -1
Query: 326 GTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
G EF LA+Y NLV+YLT ++N+ AA+N+++W G+CYLTPL+ AFLAD+YWGR
Sbjct: 285 GGEFCGSLAYYGVGTNLVSYLTKVRKQSNVTAASNIASWQGTCYLTPLLGAFLADSYWGR 106
Query: 506 YKTMIVFLLLYIV 544
++T++V L ++ +
Sbjct: 105 HRTIVVSLTIFTI 67
Score = 46.4 bits (95), Expect(2) = 2e-028
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTE 334
YT +G++DI A KK TG WRAC+ ILG +
Sbjct: 526 YTCNGSVDIKGNPASKKHTGKWRACYSILGNQ 431
>gb|CW388305.1|CW388305 fsbb001f073a03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073a03, DNA
sequence
Length = 673
Score = 92.7 bits (196), Expect(3) = 2e-028
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = +2 / -3
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLI 472
++LGTEF E LAF+A +KNL+TYL +EL E N+DAA +VSTWIGSC+LTPLI
Sbjct: 158 VLLGTEFTESLAFFAISKNLITYLMSELHERNVDAARDVSTWIGSCFLTPLI 3
Score = 63.4 bits (132), Expect(3) = 3e-023
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = -3 / +1
Query: 465 GVR*QLPIQVDTFVAASMLVSPSSAVR*VTRFFAVA*NARHSANSVP 325
GVR QLPIQV+T +AAS L S SS +R*V RFF +A NAR S NSVP
Sbjct: 10 GVRKQLPIQVETSLAASTLRSWSSLMR*VIRFFDIAKNARDSVNSVP 150
Score = 51.0 bits (105), Expect(3) = 3e-023
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = -2 / +1
Query: 328 TQNHEACSPVPGALLQSTLLVDIERSVASV 239
T N+EACSP+P ALLQS L+V+++RSVAS+
Sbjct: 253 T*NNEACSPIPDALLQSRLIVNVKRSVASI 342
Score = 42.3 bits (86), Expect(3) = 2e-028
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1 / -1
Query: 235 TIH*RRNARYQQAACSEEEHRELESMLH 318
TI+*RRNA ++AC E HRELESMLH
Sbjct: 346 TIY*RRNA*R*RSACFEAAHRELESMLH 263
Score = 34.1 bits (68), Expect(3) = 3e-023
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 218 PLEPGTESVASPHLQLP 168
PLE G ESVASPHL LP
Sbjct: 594 PLEIGNESVASPHLLLP 644
Score = 31.3 bits (62), Expect(3) = 2e-028
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / -2
Query: 173 AADEERPLIQYLAPE 217
AADEE PLI YL+PE
Sbjct: 639 AADEEMPLIHYLSPE 595
>gb|CL171160.1|CL171160 104_372_10889226_116_31779_282 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889226, DNA
sequence
Length = 770
Score = 101 bits (216), Expect(2) = 2e-028
Identities = 36/73 (49%), Positives = 55/73 (75%)
Frame = +2 / +1
Query: 326 GTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
G EF LA+Y NLV+YLT ++N+ AA+N+++W G+CYLTPL+ AFLAD+YWGR
Sbjct: 373 GGEFCGSLAYYGVGTNLVSYLTKVRKQSNVTAASNIASWQGTCYLTPLLGAFLADSYWGR 552
Query: 506 YKTMIVFLLLYIV 544
++T++V L ++ +
Sbjct: 553 HRTIVVSLTIFTI 591
Score = 46.4 bits (95), Expect(2) = 2e-028
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTE 334
YT +G++DI A KK TG WRAC+ ILG +
Sbjct: 132 YTCNGSVDIKGNPASKKHTGKWRACYSILGNQ 227
>gb|CW168731.1|CW168731 104_578_11154304_116_36602_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154304, DNA
sequence
Length = 724
Score = 93.6 bits (198), Expect(2) = 7e-028
Identities = 33/74 (44%), Positives = 55/74 (74%)
Frame = +2 / -1
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++ G EF +A+Y NLV+Y+T ++N+ AA+N++ W G+CYLTPL+ AFLAD+Y
Sbjct: 238 ILAGGEFCGAMAYYGVGTNLVSYMTKVQKQSNVAAASNIAFWQGTCYLTPLLGAFLADSY 59
Query: 497 WGRYKTMIVFLLLY 538
GR++T++V L+++
Sbjct: 58 LGRHRTILVSLMIF 17
Score = 51.0 bits (105), Expect(2) = 7e-028
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / -3
Query: 236 RYTSDGTLDINKQRALKKSTGNWRACFMILGTE 334
+YT +G++DI RA K+ TGNWRAC+ ILG +
Sbjct: 401 QYTCNGSVDIRGNRASKRHTGNWRACYSILGKD 303
>gb|CW452002.1|CW452002 fsbb001f192f10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f192f10, DNA
sequence
Length = 707
Score = 93.6 bits (198), Expect(2) = 7e-028
Identities = 33/74 (44%), Positives = 55/74 (74%)
Frame = +2 / -1
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++ G EF +A+Y NLV+Y+T ++N+ AA+N++ W G+CYLTPL+ AFLAD+Y
Sbjct: 365 ILAGGEFCGAMAYYGVGTNLVSYMTKVQKQSNVAAASNIAFWQGTCYLTPLLGAFLADSY 186
Query: 497 WGRYKTMIVFLLLY 538
GR++T++V L+++
Sbjct: 185 LGRHRTILVSLMIF 144
Score = 51.0 bits (105), Expect(2) = 7e-028
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / -3
Query: 236 RYTSDGTLDINKQRALKKSTGNWRACFMILGTE 334
+YT +G++DI RA K+ TGNWRAC+ ILG +
Sbjct: 528 QYTCNGSVDIRGNRASKRHTGNWRACYSILGKD 430
>gb|CW170733.1|CW170733 104_581_11155366_148_36519_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155366, DNA
sequence
Length = 613
Score = 93.6 bits (198), Expect(2) = 7e-028
Identities = 33/74 (44%), Positives = 55/74 (74%)
Frame = +2 / +2
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++ G EF +A+Y NLV+Y+T ++N+ AA+N++ W G+CYLTPL+ AFLAD+Y
Sbjct: 170 ILAGGEFCGAMAYYGVGTNLVSYMTKVQKQSNVAAASNIAFWQGTCYLTPLLGAFLADSY 349
Query: 497 WGRYKTMIVFLLLY 538
GR++T++V L+++
Sbjct: 350 LGRHRTILVSLMIF 391
Score = 51.0 bits (105), Expect(2) = 7e-028
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 236 RYTSDGTLDINKQRALKKSTGNWRACFMILGTE 334
+YT +G++DI RA K+ TGNWRAC+ ILG +
Sbjct: 7 QYTCNGSVDIRGNRASKRHTGNWRACYSILGKD 105
>gb|CW450257.1|CW450257 fsbb001f188m24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188m24, DNA
sequence
Length = 581
Score = 93.6 bits (198), Expect(2) = 9e-027
Identities = 33/74 (44%), Positives = 55/74 (74%)
Frame = +2 / +2
Query: 317 MILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTY 496
++ G EF +A+Y NLV+Y+T ++N+ AA+N++ W G+CYLTPL+ AFLAD+Y
Sbjct: 158 ILAGGEFCGAMAYYGVGTNLVSYMTKVQKQSNVAAASNIAFWQGTCYLTPLLGAFLADSY 337
Query: 497 WGRYKTMIVFLLLY 538
GR++T++V L+++
Sbjct: 338 LGRHRTILVSLMIF 379
Score = 47.3 bits (97), Expect(2) = 9e-027
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2 / +1
Query: 242 TSDGTLDINKQRALKKSTGNWRACFMILGTE 334
T +G++DI RA K+ TGNWRAC+ ILG +
Sbjct: 1 TCNGSVDIRGNRASKRHTGNWRACYSILGKD 93
>gb|CF074178.1|CF074178 FE1_21_G09.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_21_G09_A002 5', mRNA sequence
Length = 601
Score = 121 bits (258), Expect = 1e-026
Identities = 47/88 (53%), Positives = 61/88 (69%)
Frame = +2 / +1
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT G++D + +K++TG W+AC +ILG E E LA+Y + NLVTYLT +L N
Sbjct: 337 YTGGGSVDFSGNPVVKETTGRWKACPLILGNECCERLAYYGISTNLVTYLTKKLHAGNAS 516
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWG 502
AA+NV+TW G+CYLTPLI LAD YWG
Sbjct: 517 AASNVTTWQGTCYLTPLIGGILADAYWG 600
>gb|CW229576.1|CW229576 104_670_11207375_148_37260_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207375, DNA
sequence
Length = 598
Score = 89.5 bits (189), Expect(2) = 2e-026
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2 / -3
Query: 332 EFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYK 511
E E LAFY + NLV Y+ LG+ N A+ NV+ W G+CY+TPLI AF AD Y GR+
Sbjct: 236 ECCERLAFYGMSTNLVHYMKTRLGQVNSVASNNVTNWSGTCYITPLIGAFFADAYLGRFW 57
Query: 512 TMIVFLLLYI 541
T+ F+++YI
Sbjct: 56 TIASFMVIYI 27
Score = 51.9 bits (107), Expect(2) = 2e-026
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILG 328
E + YT DGT+D ALKK TGNWRAC ILG
Sbjct: 480 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILG 376
>gb|BE361422.1|BE361422 DG1_72_A10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 119 bits (255), Expect = 3e-026
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = +2 / +3
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + YT DGT+D ALKK TGNWRAC IL E E LA+Y + NLV Y+ LG
Sbjct: 237 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILANECCERLAYYGMSTNLVHYMKTRLG 416
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
+ N A+ NV+ W G+CY+TPLI AF AD Y R
Sbjct: 417 QVNSVASNNVTNWSGTCYITPLIGAFFADAYLXR 518
>gb|CW099092.1|CW099092 104_465_11003364_116_34375_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003364, DNA
sequence
Length = 647
Score = 98.2 bits (208), Expect(2) = 3e-026
Identities = 40/74 (54%), Positives = 50/74 (67%)
Frame = +2 / -3
Query: 323 LGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWG 502
LG E E LA+Y A NLVTYLT +L N AA+NV+TW G+CYLTPLI A LAD YWG
Sbjct: 423 LGNECCERLAYYGIATNLVTYLTKKLHVGNASAASNVTTWQGTCYLTPLIGAVLADAYWG 244
Query: 503 RYKTMIVFLLLYIV 544
+Y + ++Y +
Sbjct: 243 KYWIIATSSIVYFI 202
Score = 40.9 bits (83), Expect(2) = 3e-026
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -1
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILG 328
YT DG++D + +K+ TG W+AC ILG
Sbjct: 590 YTGDGSVDFSGNPVIKERTGRWKACPFILG 501
>gb|CW114465.1|CW114465 104_489_11106006_148_34566_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106006, DNA
sequence
Length = 627
Score = 98.2 bits (208), Expect(2) = 3e-026
Identities = 40/74 (54%), Positives = 50/74 (67%)
Frame = +2 / +3
Query: 323 LGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWG 502
LG E E LA+Y A NLVTYLT +L N AA+NV+TW G+CYLTPLI A LAD YWG
Sbjct: 198 LGNECCERLAYYGIATNLVTYLTKKLHVGNASAASNVTTWQGTCYLTPLIGAVLADAYWG 377
Query: 503 RYKTMIVFLLLYIV 544
+Y + ++Y +
Sbjct: 378 KYWIIATSSIVYFI 419
Score = 40.9 bits (83), Expect(2) = 3e-026
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILG 328
YT DG++D + +K+ TG W+AC ILG
Sbjct: 31 YTGDGSVDFSGNPVIKERTGRWKACPFILG 120
>gb|CW095034.1|CW095034 104_459_11001056_148_34272_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001056, DNA
sequence
Length = 581
Score = 98.2 bits (208), Expect(2) = 3e-026
Identities = 40/74 (54%), Positives = 50/74 (67%)
Frame = +2 / -3
Query: 323 LGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWG 502
LG E E LA+Y A NLVTYLT +L N AA+NV+TW G+CYLTPLI A LAD YWG
Sbjct: 378 LGNECCERLAYYGIATNLVTYLTKKLHVGNASAASNVTTWQGTCYLTPLIGAVLADAYWG 199
Query: 503 RYKTMIVFLLLYIV 544
+Y + ++Y +
Sbjct: 198 KYWIIATSSIVYFI 157
Score = 40.9 bits (83), Expect(2) = 3e-026
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -1
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILG 328
YT DG++D + +K+ TG W+AC ILG
Sbjct: 545 YTGDGSVDFSGNPVIKERTGRWKACPFILG 456
>gb|CW471871.1|CW471871 fsbb001f226a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f226a22, DNA
sequence
Length = 617
Score = 88.1 bits (186), Expect(2) = 4e-026
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +2 / -3
Query: 332 EFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYK 511
E E LA+Y + NLV Y+ LG+ N A+ NV+ W G+CY+TPLI AF AD Y GR+
Sbjct: 267 ECCERLAYYGMSTNLVHYMKTRLGQVNSVASNNVTNWSGTCYITPLIGAFFADAYLGRFW 88
Query: 512 TMIVFLLLYI 541
T+ F+++YI
Sbjct: 87 TIASFMVIYI 58
Score = 51.9 bits (107), Expect(2) = 4e-026
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILG 328
E + YT DGT+D ALKK TGNWRAC ILG
Sbjct: 511 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILG 407
>gb|CW287624.1|CW287624 104_765_11411512_148_35528_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411512, DNA
sequence
Length = 641
Score = 88.1 bits (186), Expect(2) = 4e-026
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +2 / +2
Query: 332 EFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYK 511
E E LA+Y + NLV Y+ LG+ N A+ NV+ W G+CY+TPLI AF AD Y GR+
Sbjct: 356 ECCERLAYYGMSTNLVHYMKTRLGQVNSVASNNVTNWSGTCYITPLIGAFFADAYLGRFW 535
Query: 512 TMIVFLLLYI 541
T+ F+++YI
Sbjct: 536 TIASFMVIYI 565
Score = 51.9 bits (107), Expect(2) = 4e-026
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILG 328
E + YT DGT+D ALKK TGNWRAC ILG
Sbjct: 112 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILG 216
>gb|CL158334.1|CL158334 104_347_10803469_116_31378_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803469, DNA
sequence
Length = 735
Score = 88.1 bits (186), Expect(2) = 5e-026
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +2 / -2
Query: 332 EFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYK 511
E E LA+Y + NLV Y+ LG+ N A+ NV+ W G+CY+TPLI AF AD Y GR+
Sbjct: 344 ECCERLAYYGMSTNLVHYMKTRLGQVNSVASNNVTNWSGTCYITPLIGAFFADAYLGRFW 165
Query: 512 TMIVFLLLYI 541
T+ F+++YI
Sbjct: 164 TIASFMVIYI 135
Score = 51.9 bits (107), Expect(2) = 5e-026
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILG 328
E + YT DGT+D ALKK TGNWRAC ILG
Sbjct: 588 EVADMYTQDGTVDRKGNPALKKDTGNWRACPYILG 484
>gb|CW096794.1|CW096794 104_462_11002093_116_34348_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002093, DNA
sequence
Length = 539
Score = 117 bits (251), Expect = 1e-025
Identities = 45/73 (61%), Positives = 57/73 (78%)
Frame = +2 / +3
Query: 326 GTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGR 505
G EF EC+A Y KNLV+YLT L E+N++AAT VSTWIG+ + TPLI AFLADT+WGR
Sbjct: 48 GAEFTECVAVYPITKNLVSYLTGVLHESNVNAATTVSTWIGTSFFTPLIGAFLADTFWGR 227
Query: 506 YKTMIVFLLLYIV 544
Y T++VFL +Y +
Sbjct: 228 YWTVVVFLSVYAI 266
>gb|CW357695.1|CW357695 fsbb001f024h13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024h13, DNA
sequence
Length = 771
Score = 95.9 bits (203), Expect(2) = 2e-025
Identities = 39/62 (62%), Positives = 45/62 (72%)
Frame = +2 / -1
Query: 323 LGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWG 502
LG E E LA+Y A NLVTYLT +L N AA+NV+TW G+CYLTPLI A LAD YWG
Sbjct: 213 LGNECCERLAYYGIATNLVTYLTKKLHVGNASAASNVTTWQGTCYLTPLIGAVLADAYWG 34
Query: 503 RY 508
+Y
Sbjct: 33 KY 28
Score = 40.9 bits (83), Expect(2) = 2e-025
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -2
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILG 328
YT DG++D + +K+ TG W+AC ILG
Sbjct: 380 YTGDGSVDFSGNPVIKERTGRWKACPFILG 291
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 736,983,330
Number of Sequences: 832831
Number of extensions: 11560405
Number of successful extensions: 154738
Number of sequences better than 1.0e-020: 68
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 15673693203
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)