TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAJ1a04.yg.2.1
(386 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE361155.1|BE361155 DG1_70_H03.b1_A002 Dark Grown 1 (DG1... 106 7e-034
gb|BE357487.1|BE357487 DG1_20_B09.b2_A002 Dark Grown 1 (DG1... 106 7e-034
gb|BE359658.1|BE359658 DG1_56_E12.b2_A002 Dark Grown 1 (DG1... 106 8e-034
gb|AW922218.1|AW922218 DG1_17_C12.b1_A002 Dark Grown 1 (DG1... 106 8e-034
gb|CN124533.1|CN124533 RHOH1_5_A02.g1_A002 Acid- and alkali... 106 1e-033
gb|CN128187.1|CN128187 RHOH1_27_D08.g1_A002 Acid- and alkal... 106 1e-033
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 103 7e-033
gb|CN148176.1|CN148176 WOUND1_54_D09.g1_A002 Wounded leaves... 96 1e-031
gb|CD432578.1|CD432578 ETH1_30_D10.g1_A002 Ethylene-treated... 96 1e-031
gb|CD232926.1|CD232926 SS1_10_A10.g1_A012 Salt-stressed see... 96 1e-031
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 95 2e-031
gb|AW923085.1|AW923085 DG1_50_B11.b1_A002 Dark Grown 1 (DG1... 97 3e-031
gb|CN145790.1|CN145790 WOUND1_35_F12.b1_A002 Wounded leaves... 96 4e-031
gb|CN152357.1|CN152357 WOUND1_81_C05.g1_A002 Wounded leaves... 90 1e-029
gb|CN147980.1|CN147980 WOUND1_53_A07.g1_A002 Wounded leaves... 92 3e-029
gb|CN148000.1|CN148000 WOUND1_53_C12.g1_A002 Wounded leaves... 90 4e-027
gb|CN151110.1|CN151110 WOUND1_73_B01.g1_A002 Wounded leaves... 79 1e-026
gb|CN146115.1|CN146115 WOUND1_37_E06.g1_A002 Wounded leaves... 73 8e-025
gb|CN152542.1|CN152542 WOUND1_82_E09.g1_A002 Wounded leaves... 73 1e-024
gb|CN146020.1|CN146020 WOUND1_36_H04.g1_A002 Wounded leaves... 72 1e-024
gb|CN149777.1|CN149777 WOUND1_64_G04.g1_A002 Wounded leaves... 72 2e-024
gb|CX614863.1|CX614863 GABR1_16_G01.g1_A002 GA- or brassino... 70 7e-024
gb|CN149263.1|CN149263 WOUND1_61_E05.g1_A002 Wounded leaves... 69 1e-023
gb|CN150486.1|CN150486 WOUND1_69_B07.g1_A002 Wounded leaves... 67 6e-023
gb|CW177488.1|CW177488 104_590_11159053_116_36590_049 Sorgh... 106 2e-022
gb|CW183756.1|CW183756 104_599_11164783_148_36676_020 Sorgh... 106 2e-022
gb|CW224101.1|CW224101 104_660_11203270_116_37444_091 Sorgh... 106 2e-022
gb|CW274067.1|CW274067 104_746_11404237_148_35366_049 Sorgh... 106 2e-022
gb|CW437740.1|CW437740 fsbb001f155a03k0 Sorghum methylation... 106 2e-022
gb|BE356093.1|BE356093 DG1_122_B02.b1_A002 Dark Grown 1 (DG... 106 2e-022
gb|CN145973.1|CN145973 WOUND1_36_C07.g1_A002 Wounded leaves... 64 3e-022
gb|CN150994.1|CN150994 WOUND1_72_F10.g1_A002 Wounded leaves... 64 3e-022
gb|CN148802.1|CN148802 WOUND1_58_H04.g1_A002 Wounded leaves... 64 3e-022
gb|CN146118.1|CN146118 WOUND1_37_E11.g1_A002 Wounded leaves... 64 3e-022
gb|CN137940.1|CN137940 OX1_60_F03.g1_A002 Oxidatively-stres... 61 4e-021
>gb|BE361155.1|BE361155 DG1_70_H03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 106 bits (226), Expect(2) = 7e-034
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 252 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 431
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 432 YIVAHNLLRAHAETVDIYN 488
Score = 80.3 bits (169), Expect(2) = 3e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -2
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 460 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 281
Query: 178 XXXXLAK 158
LAK
Sbjct: 280 SKHTLAK 260
Score = 57.0 bits (118), Expect(2) = 7e-034
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 123 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 236
Score = 44.1 bits (90), Expect(2) = 3e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 236 LI*EAAIRVYQRLRRVPVENCYIWLYAV 153
>gb|BE357487.1|BE357487 DG1_20_B09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 106 bits (226), Expect(2) = 7e-034
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 337 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 516
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 517 YIVAHNLLRAHAETVDIYN 573
Score = 80.3 bits (169), Expect(2) = 3e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -3
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 545 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 366
Query: 178 XXXXLAK 158
LAK
Sbjct: 365 SKHTLAK 345
Score = 57.0 bits (118), Expect(2) = 7e-034
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 208 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 321
Score = 44.1 bits (90), Expect(2) = 3e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -2
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 321 LI*EAAIRVYQRLRRVPVENCYIWLYAV 238
>gb|BE359658.1|BE359658 DG1_56_E12.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 600
Score = 106 bits (226), Expect(2) = 8e-034
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 345 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 524
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 525 YIVAHNLLRAHAETVDIYN 581
Score = 80.3 bits (169), Expect(2) = 3e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -3
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 553 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 374
Query: 178 XXXXLAK 158
LAK
Sbjct: 373 SKHTLAK 353
Score = 57.0 bits (118), Expect(2) = 8e-034
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 216 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 329
Score = 44.1 bits (90), Expect(2) = 3e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -2
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 329 LI*EAAIRVYQRLRRVPVENCYIWLYAV 246
>gb|AW922218.1|AW922218 DG1_17_C12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 602
Score = 106 bits (226), Expect(2) = 8e-034
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 273 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 452
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 453 YIVAHNLLRAHAETVDIYN 509
Score = 80.3 bits (169), Expect(2) = 3e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -2
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 481 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 302
Query: 178 XXXXLAK 158
LAK
Sbjct: 301 SKHTLAK 281
Score = 57.0 bits (118), Expect(2) = 8e-034
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 144 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 257
Score = 44.1 bits (90), Expect(2) = 3e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 257 LI*EAAIRVYQRLRRVPVENCYIWLYAV 174
>gb|CN124533.1|CN124533 RHOH1_5_A02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_A02_A002 5', mRNA sequence
Length = 737
Score = 106 bits (226), Expect(2) = 1e-033
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 339 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 518
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 519 YIVAHNLLRAHAETVDIYN 575
Score = 80.3 bits (169), Expect(2) = 4e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -2
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 547 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 368
Query: 178 XXXXLAK 158
LAK
Sbjct: 367 SKHTLAK 347
Score = 57.0 bits (118), Expect(2) = 1e-033
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 210 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 323
Score = 44.1 bits (90), Expect(2) = 4e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 323 LI*EAAIRVYQRLRRVPVENCYIWLYAV 240
>gb|CN128187.1|CN128187 RHOH1_27_D08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_D08_A002 5', mRNA sequence
Length = 716
Score = 106 bits (226), Expect(2) = 1e-033
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 344 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 523
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 524 YIVAHNLLRAHAETVDIYN 580
Score = 80.3 bits (169), Expect(2) = 4e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -3
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 552 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 373
Query: 178 XXXXLAK 158
LAK
Sbjct: 372 SKHTLAK 352
Score = 57.0 bits (118), Expect(2) = 1e-033
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 215 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 328
Score = 44.1 bits (90), Expect(2) = 4e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -2
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 328 LI*EAAIRVYQRLRRVPVENCYIWLYAV 245
>gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nuclear gene encoding chloroplast
protein, complete cds
Length = 1983
Score = 103 bits (220), Expect(2) = 7e-033
Identities = 41/79 (51%), Positives = 46/79 (58%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 719 YTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 898
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 899 YIVAHNLLRAHAETVDIYN 955
Score = 80.3 bits (169), Expect(2) = 4e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -1
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 927 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTVLPNF 748
Query: 178 XXXXLAK 158
LAK
Sbjct: 747 SKHTLAK 727
Score = 57.0 bits (118), Expect(2) = 7e-033
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 590 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 703
Score = 44.1 bits (90), Expect(2) = 4e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 703 LI*EAAIRVYQRLRRVPVENCYIWLYAV 620
>gb|CN148176.1|CN148176 WOUND1_54_D09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_D09_A002 5', mRNA sequence
Length = 826
Score = 95.9 bits (203), Expect(2) = 1e-031
Identities = 37/79 (46%), Positives = 45/79 (56%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 153 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 332
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ N+LLAH LYN
Sbjct: 333 YLVGHNLLLAHAETVDLYN 389
Score = 60.6 bits (126), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 24 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 137
>gb|CD432578.1|CD432578 ETH1_30_D10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_D10_A002 5', mRNA sequence
Length = 769
Score = 95.9 bits (203), Expect(2) = 1e-031
Identities = 37/79 (46%), Positives = 45/79 (56%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 272 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 451
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ N+LLAH LYN
Sbjct: 452 YLVGHNLLLAHAETVDLYN 508
Score = 60.6 bits (126), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 143 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 256
>gb|CD232926.1|CD232926 SS1_10_A10.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_10_A10_A012 5', mRNA sequence
Length = 632
Score = 95.9 bits (203), Expect(2) = 1e-031
Identities = 37/79 (46%), Positives = 45/79 (56%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 137 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 316
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ N+LLAH LYN
Sbjct: 317 YLVGHNLLLAHAETVDLYN 373
Score = 60.6 bits (126), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 8 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 121
>gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-glucosidase dhurrinase-2 mRNA,
complete cds
Length = 1935
Score = 95.0 bits (201), Expect(2) = 2e-031
Identities = 37/79 (46%), Positives = 44/79 (55%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 692 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 871
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ N LLAH LYN
Sbjct: 872 YLVGHNFLLAHAETVDLYN 928
Score = 60.6 bits (126), Expect(2) = 2e-031
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 563 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 676
>gb|AW923085.1|AW923085 DG1_50_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 97.3 bits (206), Expect(2) = 3e-031
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 273 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 452
Query: 330 YIGXXNILLA 359
YI N+L A
Sbjct: 453 YIVAHNLLRA 482
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -2 / -1
Query: 358 ARRMLXXPM*GXXSEFPVGMAQSSPGEHRPGXKTPVP*ENEVNXWGXLKXXQFXXXXXKL 179
ARR L M G SEFPVG AQ +PGEHRPG +TPVP*E E N G LK QF
Sbjct: 481 ARRRLWATMYGSLSEFPVGTAQLTPGEHRPGARTPVP*ETEQNVSGSLKVNQFFTFLPNF 302
Query: 178 XXXXLAK 158
LAK
Sbjct: 301 SKHTLAK 281
Score = 57.0 bits (118), Expect(2) = 3e-031
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y + NGIEPY T+FHWDTPQ LVD FLD+
Sbjct: 144 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE 257
Score = 44.1 bits (90), Expect(2) = 2e-022
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 125 LI*EXXVXVHQXLRCVPVEKCXIWFYAV 42
LI*E + V+Q LR VPVE C IW YAV
Sbjct: 257 LI*EAAIRVYQRLRRVPVENCYIWLYAV 174
>gb|CN145790.1|CN145790 WOUND1_35_F12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_35_F12_A002 3', mRNA sequence
Length = 825
Score = 95.9 bits (203), Expect(2) = 4e-031
Identities = 37/79 (46%), Positives = 45/79 (56%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 130 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 309
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ N+LLAH LYN
Sbjct: 310 YLVGHNLLLAHAETVDLYN 366
Score = 58.8 bits (122), Expect(2) = 4e-031
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ L D FLDK
Sbjct: 1 YNNLINLLIDNGIEPYVTIFHWDTPQALADDYGGFLDK 114
>gb|CN152357.1|CN152357 WOUND1_81_C05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_C05_A002 5', mRNA sequence
Length = 900
Score = 89.5 bits (189), Expect(2) = 1e-029
Identities = 34/71 (47%), Positives = 42/71 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 684 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 863
Query: 330 YIGXXNILLAH 362
Y+ N+LLAH
Sbjct: 864 YLVGHNLLLAH 896
Score = 60.6 bits (126), Expect(2) = 1e-029
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 555 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 668
>gb|CN147980.1|CN147980 WOUND1_53_A07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_A07_A002 5', mRNA sequence
Length = 720
Score = 92.3 bits (195), Expect(2) = 3e-029
Identities = 36/79 (45%), Positives = 44/79 (55%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSP + PTG+S+ P
Sbjct: 290 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPRMKCPDPTGDSIREP 469
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ N+LLAH LYN
Sbjct: 470 YLVGHNLLLAHAETVDLYN 526
Score = 56.5 bits (117), Expect(2) = 3e-029
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGI PY T+FHWDTPQ LVD FLDK
Sbjct: 161 YNNLINLLIDNGI*PYVTIFHWDTPQALVDDYGGFLDK 274
>gb|CN148000.1|CN148000 WOUND1_53_C12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_C12_A002 5', mRNA sequence
Length = 577
Score = 90.0 bits (190), Expect(2) = 4e-027
Identities = 35/79 (44%), Positives = 44/79 (55%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SY TG+ PGRCSPG+ PTG+S+ P
Sbjct: 126 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYRTGILAPGRCSPGMKCPDPTGDSIREP 305
Query: 330 YIGXXNILLAHXXXXXLYN 386
Y+ ++LLAH LYN
Sbjct: 306 YLVGHSLLLAHAETVDLYN 362
Score = 51.0 bits (105), Expect(2) = 4e-027
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 27 NXXXXNGIEPYXTLFHWDTPQXLVD 101
N NGIEPY T+FHWDTPQ LVD
Sbjct: 11 NLLIDNGIEPYVTIFHWDTPQALVD 85
>gb|CN151110.1|CN151110 WOUND1_73_B01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_73_B01_A002 5', mRNA sequence
Length = 872
Score = 79.0 bits (166), Expect(2) = 1e-026
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+ P
Sbjct: 684 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSIREP 863
Query: 330 YI 335
Y+
Sbjct: 864 YL 869
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 555 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 668
>gb|CN146115.1|CN146115 WOUND1_37_E06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_37_E06_A002 5', mRNA sequence
Length = 845
Score = 72.5 bits (152), Expect(2) = 8e-025
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSL 320
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+
Sbjct: 673 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSI 843
Score = 61.1 bits (127), Expect(2) = 8e-025
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 544 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYSGFLDK 657
>gb|CN152542.1|CN152542 WOUND1_82_E09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_E09_A002 5', mRNA sequence
Length = 852
Score = 72.5 bits (152), Expect(2) = 1e-024
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSL 320
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S+
Sbjct: 682 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDSI 852
Score = 60.6 bits (126), Expect(2) = 1e-024
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 553 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 666
>gb|CN146020.1|CN146020 WOUND1_36_H04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_H04_A002 5', mRNA sequence
Length = 853
Score = 71.6 bits (150), Expect(2) = 1e-024
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNS 317
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S
Sbjct: 685 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDS 852
Score = 61.1 bits (127), Expect(2) = 1e-024
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 556 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYSGFLDK 669
>gb|CN149777.1|CN149777 WOUND1_64_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_G04_A002 5', mRNA sequence
Length = 855
Score = 71.6 bits (150), Expect(2) = 2e-024
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNS 317
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+S
Sbjct: 686 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGDS 853
Score = 60.6 bits (126), Expect(2) = 2e-024
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 557 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 670
>gb|CX614863.1|CX614863 GABR1_16_G01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_16_G01_A002 5', mRNA sequence
Length = 847
Score = 69.8 bits (146), Expect(2) = 7e-024
Identities = 26/55 (47%), Positives = 31/55 (56%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGN 314
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PTG+
Sbjct: 682 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPTGD 846
Score = 60.6 bits (126), Expect(2) = 7e-024
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 553 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 666
>gb|CN149263.1|CN149263 WOUND1_61_E05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_E05_A002 5', mRNA sequence
Length = 847
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSL 320
Y +FA F + NW FN P FT SY TG+ PGRCSPG+ PTG+S+
Sbjct: 672 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYRTGILAPGRCSPGMKCPDPTGDSI 842
Score = 60.6 bits (126), Expect(2) = 1e-023
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 543 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 656
>gb|CN150486.1|CN150486 WOUND1_69_B07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_69_B07_A002 5', mRNA sequence
Length = 830
Score = 66.6 bits (139), Expect(2) = 6e-023
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPT 308
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+ PT
Sbjct: 671 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGMKCPDPT 829
Score = 60.6 bits (126), Expect(2) = 6e-023
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 542 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 655
>gb|CW177488.1|CW177488 104_590_11159053_116_36590_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159053, DNA
sequence
Length = 737
Score = 106 bits (226), Expect = 2e-022
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / -2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 538 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 359
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 358 YIVAHNLLRAHAETVDIYN 302
>gb|CW183756.1|CW183756 104_599_11164783_148_36676_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164783, DNA
sequence
Length = 630
Score = 106 bits (226), Expect = 2e-022
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / -2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 614 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 435
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 434 YIVAHNLLRAHAETVDIYN 378
>gb|CW224101.1|CW224101 104_660_11203270_116_37444_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203270, DNA
sequence
Length = 698
Score = 106 bits (226), Expect = 2e-022
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 33 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 212
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 213 YIVAHNLLRAHAETVDIYN 269
>gb|CW274067.1|CW274067 104_746_11404237_148_35366_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404237, DNA
sequence
Length = 663
Score = 106 bits (226), Expect = 2e-022
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 167 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 346
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 347 YIVAHNLLRAHAETVDIYN 403
>gb|CW437740.1|CW437740 fsbb001f155a03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f155a03, DNA
sequence
Length = 624
Score = 106 bits (226), Expect = 2e-022
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / -3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 355 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 176
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 175 YIVAHNLLRAHAETVDIYN 119
>gb|BE356093.1|BE356093 DG1_122_B02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 106 bits (226), Expect = 2e-022
Identities = 42/79 (53%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
Y +FAK F K NW FN P F S SYGTGV PGRCSPG+ A+PTGNSL P
Sbjct: 27 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEP 206
Query: 330 YIGXXNILLAHXXXXXLYN 386
YI N+L AH +YN
Sbjct: 207 YIVAHNLLRAHAETVDIYN 263
>gb|CN145973.1|CN145973 WOUND1_36_C07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_C07_A002 5', mRNA sequence
Length = 836
Score = 64.3 bits (134), Expect(2) = 3e-022
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +3 / +1
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGL 290
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+
Sbjct: 685 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGM 825
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 556 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 669
>gb|CN150994.1|CN150994 WOUND1_72_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_72_F10_A002 5', mRNA sequence
Length = 835
Score = 64.3 bits (134), Expect(2) = 3e-022
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGL 290
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+
Sbjct: 681 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGM 821
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 552 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 665
>gb|CN148802.1|CN148802 WOUND1_58_H04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_H04_A002 5', mRNA sequence
Length = 820
Score = 64.3 bits (134), Expect(2) = 3e-022
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGL 290
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+
Sbjct: 671 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGM 811
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 542 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 655
>gb|CN146118.1|CN146118 WOUND1_37_E11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_37_E11_A002 5', mRNA sequence
Length = 817
Score = 64.3 bits (134), Expect(2) = 3e-022
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +3 / +2
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGL 290
Y +FA F + NW FN P FT SYGTG+ PGRCSPG+
Sbjct: 671 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCSPGM 811
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 542 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 655
>gb|CN137940.1|CN137940 OX1_60_F03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_F03_A002 5', mRNA sequence
Length = 820
Score = 60.6 bits (126), Expect(2) = 4e-021
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +3 / +3
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGL 290
Y +FA F + NW FN P FT SY TG+ PGRCSPG+
Sbjct: 672 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYRTGILAPGRCSPGM 812
Score = 60.6 bits (126), Expect(2) = 4e-021
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 12 YKXXXNXXXXNGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
Y N NGIEPY T+FHWDTPQ LVD FLDK
Sbjct: 543 YNNLINLLIDNGIEPYVTIFHWDTPQALVDDYGGFLDK 656
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 247,379,828
Number of Sequences: 832831
Number of extensions: 1595980
Number of successful extensions: 60582
Number of sequences better than 1.0e-020: 40
length of database: 163,786,556
effective HSP length: 52
effective length of database: 120,479,344
effective search space used: 9156430144
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)