TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAH4a02.xg.2.1
(526 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN133913.1|CN133913 OX1_19_D01.b1_A002 Oxidatively-stres... 371 e-102
gb|CW392111.1|CW392111 fsbb001f078j07k0 Sorghum methylation... 179 1e-086
gb|CW275167.1|CW275167 104_748_11404818_148_35383_073 Sorgh... 161 4e-075
gb|CX622684.1|CX622684 GABR1_65_H12.b1_A002 GA- or brassino... 274 5e-073
gb|CW122925.1|CW122925 104_502_11110938_116_34690_079 Sorgh... 162 1e-057
gb|CD424847.1|CD424847 SA1_9_H04.b1_A002 Salicylic acid-tre... 129 2e-052
gb|BE358411.1|BE358411 DG1_29_C02.g1_A002 Dark Grown 1 (DG1... 124 7e-051
gb|BG323188.1|BG323188 EM1_15_H09.g1_A002 Embryo 1 (EM1) So... 124 7e-051
gb|CD424232.1|CD424232 SA1_4_H05.b1_A002 Salicylic acid-tre... 124 7e-051
gb|BF656911.1|BF656911 OV2_22_E11.g1_A002 Ovary 2 (OV2) Sor... 124 7e-051
gb|CW040084.1|CW040084 104_273_10505880_114_30266 Sorghum m... 139 1e-048
gb|CW499260.1|CW499260 fsbb001f293o20f0 Sorghum methylation... 147 3e-045
gb|BG487902.1|BG487902 RHIZ2_60_G05.g1_A003 Rhizome2 (RHIZ2... 103 4e-043
gb|CF072232.1|CF072232 FE1_6_H10.b1_A002 Iron-deficient see... 161 5e-039
gb|CD427202.1|CD427202 SA1_18_E02.b1_A002 Salicylic acid-tr... 99 2e-033
gb|CF072326.1|CF072326 FE1_2_H07.b1_A002 Iron-deficient see... 98 1e-032
gb|CW429242.1|CW429242 fsbb001f142g06k0 Sorghum methylation... 110 2e-032
gb|CW391719.1|CW391719 fsbb001f078a05k0 Sorghum methylation... 75 8e-032
gb|CD463051.1|CD463051 ETH1_42_E06.b1_A002 Ethylene-treated... 124 1e-031
gb|CW316446.1|CW316446 104_807_11472898_148_35847_033 Sorgh... 89 2e-031
gb|BM327869.1|BM327869 PIC1_18_E04.g1_A002 Pathogen-infecte... 98 1e-030
gb|BG357415.1|BG357415 OV2_29_F03.g1_A002 Ovary 2 (OV2) Sor... 98 1e-030
gb|BG558740.1|BG558740 RHIZ2_59_H07.g1_A003 Rhizome2 (RHIZ2... 93 3e-028
gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING... 90 6e-028
gb|CW360333.1|CW360333 fsbb001f028g01k0 Sorghum methylation... 90 7e-028
gb|CF072848.1|CF072848 FE1_26_E01.b1_A002 Iron-deficient se... 98 3e-026
gb|BG556485.1|BG556485 EM1_37_G04.g1_A002 Embryo 1 (EM1) So... 96 4e-026
gb|BM331190.1|BM331190 PIC1_70_G09.g1_A002 Pathogen-infecte... 98 3e-025
gb|BQ656040.1|BQ656040 pRC0338 Sorghum halepense rhizome cD... 95 1e-024
gb|BG933148.1|BG933148 WS1_29_G10.b1_A002 Water-stressed 1 ... 113 2e-024
gb|CD234501.1|CD234501 SS1_27_C11.g1_A012 Salt-stressed see... 113 2e-024
>gb|CN133913.1|CN133913 OX1_19_D01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_D01_A002 3', mRNA sequence
Length = 715
Score = 371 bits (808), Expect = e-102
Identities = 147/157 (93%), Positives = 153/157 (97%)
Frame = +1 / +1
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
RNSD+VEMASCAPL VNDNDQRWNPDAIVFNSWQHYGCPNYW+LHFFKDSS A LHPSTI
Sbjct: 4 RNSDMVEMASCAPLFVNDNDQRWNPDAIVFNSWQHYGCPNYWILHFFKDSSGAALHPSTI 183
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVL 414
QLPNYDQLVTSAITWNNPHDGNTY+KIKVVNFGSKAV+LNISVTGLE DIQTFGS+KTVL
Sbjct: 184 QLPNYDQLVTSAITWNNPHDGNTYLKIKVVNFGSKAVNLNISVTGLEADIQTFGSLKTVL 363
Query: 415 TSGWLRDENSFQQPDKVVPAASPITNAGKQMGVILNS 525
TSGWLRDENSFQQPDKVVPAASPITNAGKQMGV+LNS
Sbjct: 364 TSGWLRDENSFQQPDKVVPAASPITNAGKQMGVVLNS 474
Score = 323 bits (704), Expect = 3e-088
Identities = 133/157 (84%), Positives = 143/157 (91%)
Frame = -2 / -2
Query: 522 VQYNTHLLARVGYWTCRRHHLVGLLKGVLIPQPTRRENRLYGSKCLNISFQPSYRYIQTN 343
VQ NTHLLARVGYWT RR+HLVGLL+GVLIP PT RENRL GSKCLNISFQPSYRYIQ N
Sbjct: 471 VQNNTHLLARVGYWTRRRNHLVGLLEGVLIP*PT*RENRL*GSKCLNISFQPSYRYIQIN 292
Query: 342 SFASKIYNLYFHVSVPIMWVIPSDSRCDQLVVVR*LNSGRMKCGAA*IFEKVQHPVIWTS 163
SFASKIYNLYF VSVPIMW+IP DSRCDQL++V *LNSGRMKC A *IFE+V +PVIWTS
Sbjct: 291 SFASKIYNLYFQVSVPIMWIIPRDSRCDQLIIVW*LNSGRMKCSAT*IFEEV*NPVIWTS 112
Query: 162 IVLP*VKDYSIWVPPLVIVVYKEWSTTCHLNHVAVPF 52
IVLP*+KD SIWVPPL+IV+YKEW TTCHLNHVAVPF
Sbjct: 111 IVLP*IKDNSIWVPPLIIVIYKEWGTTCHLNHVAVPF 1
Score = 314 bits (683), Expect = 2e-085
Identities = 142/157 (90%), Positives = 144/157 (91%)
Frame = -3 / -3
Query: 524 EFNITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRL 345
EF TPICLPALVIGLAAGTTLSGC KEFSSRSQPDVRTVF DPNV*IS SNPVTDIFRL
Sbjct: 473 EFRTTPICLPALVIGLAAGTTLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRL 294
Query: 344 TALLPKFTTFIFM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGH 165
TALLPKFTTFIF *VFPSCGLF VIADVT+ S*FGS*IVDG*S A LESLKKC IQ*FGH
Sbjct: 293 TALLPKFTTFIFR*VFPSCGLFHVIADVTN*S*FGS*IVDG*SAAPLESLKKCRIQ*FGH 114
Query: 164 P*CCHELKTIASGFHLWSLSFTRSGAQLAISTTSLFL 54
P*CCHELKTIASGFHL SLSFT+SGAQLAIST SLFL
Sbjct: 113 P*CCHELKTIASGFHL*SLSFTKSGAQLAISTMSLFL 3
Score = 303 bits (659), Expect = 5e-082
Identities = 128/157 (81%), Positives = 135/157 (85%)
Frame = +3 / +3
Query: 54 KEQRRG*DGKLCSTPCKRQ*PKVEPRCYSL*LMAALWMSKLLDAALFQRFKQRHTSSVHY 233
KEQR G*DGKLC T CK Q* KVEPRCY L* MAALWMSKLLD+ L QRFK R TSSVHY
Sbjct: 3 KEQRHG*DGKLCPTLCK*Q*SKVEPRCYCL*FMAALWMSKLLDSTLLQRFKWRCTSSVHY 182
Query: 234 STTELRPTGHICYHLE*PT*WEHLHENKGCKFWKQSC*SEYICNWVGN*YSDIWIHKDGS 413
STT+L GHICYH+E* T*WEHL ENKGCKFWKQSC*SEYICNWVG+*YSDIWI KDGS
Sbjct: 183 STTKL*SIGHICYHVE*ST*WEHLPENKGCKFWKQSC*SEYICNWVGS*YSDIWILKDGS 362
Query: 414 HVGLAAG*ELLSTARQGGAGGKSNNQRGQANGCYIEL 524
HV LA G*ELL TARQGG+GG+SNNQRGQA+GC EL
Sbjct: 363 HVRLATG*ELLPTARQGGSGGESNNQRGQADGCCSEL 473
Score = 303 bits (659), Expect = 5e-082
Identities = 134/157 (85%), Positives = 140/157 (89%)
Frame = +2 / +2
Query: 53 KGTATWLRWQVVLHSL*TTMTKGGTQML*SLTHGSTMDVQITGCCTFSKIQAAPHFIRPL 232
KGTATWLRWQVV HSL* TM KGGTQML SL HGSTMDVQITG T SKIQ A HFIRPL
Sbjct: 2 KGTATWLRWQVVPHSL*MTMIKGGTQMLLSLIHGSTMDVQITGFYTSSKIQVALHFIRPL 181
Query: 233 FNYRTTTNWSHLLSLGITHMMGTLT*K*RL*ILEAKLLV*IYL*LGWKLIFRHLDP*RRF 412
FNY+T NWSHLLS GI HMMGTLT*K*RL*ILEAKLL+*IYL*LGWKLIFRHLDP*RRF
Sbjct: 182 FNYQTMINWSHLLSRGIIHMMGTLT*K*RL*ILEAKLLI*IYL*LGWKLIFRHLDP*RRF 361
Query: 413 SRRVGCGMRTPFNSPTRWCRRQVQ*PTRASKWVLY*T 523
SR+VG GMRTP NSPTRW RR+VQ*PTRAS+WVL+*T
Sbjct: 362 SRQVGYGMRTPSNSPTRWFRRRVQ*PTRASRWVLF*T 472
Score = 288 bits (627), Expect = 1e-077
Identities = 128/157 (81%), Positives = 131/157 (83%)
Frame = -1 / -1
Query: 523 SSI*HPFACPRWLLDLPPAPPCRAVERSSHPAANPT*EPSLWIQMSEYQFPTQLQIYSD* 344
SS HP ACPRWLLD PP PPCRAV RSSHP AN T*EPSL IQMSEYQ PTQLQIYSD*
Sbjct: 472 SSEQHPSACPRWLLDSPPEPPCRAVGRSSHPVANLT*EPSLRIQMSEYQLPTQLQIYSD* 293
Query: 343 QLCFQNLQPLFSCKCSHHVGYSK**QM*PVGRSSVVE*WTDEVWRCLNL*KSAASSNLDI 164
QLCFQNLQPLFS KCSHHV YS **QM*P+ S VVE*WTDEV R LNL*+S SSNLDI
Sbjct: 292 QLCFQNLQPLFSGKCSHHVDYST**QM*PIDHSLVVE*WTDEVQRHLNL*RSVESSNLDI 113
Query: 163 HSAAMS*RL*HLGSTFGHCRLQGVEHNLPSQPRRCSF 53
HSAAM+*R *HLGSTF HC LQ V HNLPSQP RCSF
Sbjct: 112 HSAAMN*RQ*HLGSTFDHCHLQRVGHNLPSQPCRCSF 2
>gb|CW392111.1|CW392111 fsbb001f078j07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f078j07, DNA
sequence
Length = 802
Score = 179 bits (388), Expect(4) = 1e-086
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = +1 / -1
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDG 297
RWNPDAIVFNSWQHYGCPNYW+LHFFKDSS A LHPSTIQLPNYDQLVTSAITWNNPHDG
Sbjct: 511 RWNPDAIVFNSWQHYGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDG 332
Query: 298 NTYMKIKVVNF 330
NTY+KIKV++F
Sbjct: 331 NTYLKIKVISF 299
Score = 137 bits (295), Expect(4) = 5e-074
Identities = 63/73 (86%), Positives = 64/73 (87%)
Frame = -3 / +3
Query: 329 KFTTFIFM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCH 150
K TFIF *VFPSCGLF VIADVT+ S*FGS*IVDG*S A LESLKKC IQ*FGHP*CCH
Sbjct: 300 KEITFIFR*VFPSCGLFHVIADVTN*S*FGS*IVDG*SAAPLESLKKCRIQ*FGHP*CCH 479
Query: 149 ELKTIASGFHLWS 111
ELKTIASGFHL S
Sbjct: 480 ELKTIASGFHLSS 518
Score = 134 bits (289), Expect(3) = 3e-063
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2 / +2
Query: 321 NLYFHVSVPIMWVIPSDSRCDQLVVVR*LNSGRMKCGAA*IFEKVQHPVIWTSIVLP*VK 142
+LYF VSVPIMW+IP DSRCDQL++V *LNSGRMKC A *IFE+V +PVIWTSIVLP*+K
Sbjct: 308 HLYFQVSVPIMWIIPRDSRCDQLIIVW*LNSGRMKCSAT*IFEEV*NPVIWTSIVLP*IK 487
Query: 141 DYSIWVPPL 115
D SIWVPP+
Sbjct: 488 DNSIWVPPI 514
Score = 126 bits (271), Expect(3) = 6e-063
Identities = 54/70 (77%), Positives = 57/70 (81%)
Frame = +3 / -3
Query: 120 VEPRCYSL*LMAALWMSKLLDAALFQRFKQRHTSSVHYSTTELRPTGHICYHLE*PT*WE 299
VEPRCY L* MAALWMSKLLD+ L QRFK R TSSVHYSTT+L GHICYH+E* T*WE
Sbjct: 509 VEPRCYCL*FMAALWMSKLLDSTLLQRFKWRCTSSVHYSTTKL*SIGHICYHVE*ST*WE 330
Query: 300 HLHENKGCKF 329
HL ENKG F
Sbjct: 329 HLPENKGDLF 300
Score = 123 bits (265), Expect(3) = 2e-058
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / -2
Query: 119 GGTQML*SLTHGSTMDVQITGCCTFSKIQAAPHFIRPLFNYRTTTNWSHLLSLGITHMMG 298
GGTQML SL HGSTMDVQITG T SKIQ A HFIRPLFNY+T NWSHLLS GI HMMG
Sbjct: 510 GGTQMLLSLIHGSTMDVQITGFYTSSKIQVALHFIRPLFNYQTMINWSHLLSRGIIHMMG 331
Query: 299 TLT*K*R 319
TLT*K*R
Sbjct: 330 TLT*K*R 310
Score = 113 bits (243), Expect(3) = 2e-054
Identities = 53/68 (77%), Positives = 57/68 (83%)
Frame = -1 / +1
Query: 319 PLFSCKCSHHVGYSK**QM*PVGRSSVVE*WTDEVWRCLNL*KSAASSNLDIHSAAMS*R 140
PLFS KCSHHV YS **QM*P+ S VVE*WTDEV R LNL*+S SSNLDIHSAAM+*R
Sbjct: 310 PLFSGKCSHHVDYST**QM*PIDHSLVVE*WTDEVQRHLNL*RSVESSNLDIHSAAMN*R 489
Query: 139 L*HLGSTF 116
*HLGST+
Sbjct: 490 Q*HLGSTY 513
Score = 110 bits (237), Expect(4) = 1e-086
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1 / -3
Query: 316 KVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKV 465
+VVNFGSKAV+LNISVTGLE DIQTFGS+KTVLTSGWLRDENSFQQPDKV
Sbjct: 230 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 81
Score = 109 bits (235), Expect(3) = 6e-063
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = +3 / -2
Query: 318 GCKFWKQSC*SEYICNWVGN*YSDIWIHKDGSHVGLAAG*ELLSTARQG 464
GCKFWKQSC*SEYICNWVG+*YSDIWI KDGSHV LA G*ELL TARQG
Sbjct: 228 GCKFWKQSC*SEYICNWVGS*YSDIWILKDGSHVRLATG*ELLPTARQG 82
Score = 105 bits (226), Expect(4) = 5e-074
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = -3 / +1
Query: 464 TLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTALLPKFTT 318
TLSGC KEFSSRSQPDVRTVF DPNV*IS SNPVTDIFRLTALLPKFTT
Sbjct: 82 TLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRLTALLPKFTT 228
Score = 102 bits (219), Expect(3) = 2e-058
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2 / -1
Query: 317 RL*ILEAKLLV*IYL*LGWKLIFRHLDP*RRFSRRVGCGMRTPFNSPTRW 466
RL*ILEAKLL+*IYL*LGWKLIFRHLDP*RRFSR+VG GMRTP NSPTR+
Sbjct: 229 RL*ILEAKLLI*IYL*LGWKLIFRHLDP*RRFSRQVGYGMRTPSNSPTRF 80
Score = 102 bits (219), Expect(3) = 3e-063
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -1 / +2
Query: 463 PCRAVERSSHPAANPT*EPSLWIQMSEYQFPTQLQIYSD*QLCFQNLQP 317
PCRAV RSSHP AN T*EPSL IQMSEYQ PTQLQIYSD*QLCFQNLQP
Sbjct: 83 PCRAVGRSSHPVANLT*EPSLRIQMSEYQLPTQLQIYSD*QLCFQNLQP 229
Score = 100 bits (215), Expect(3) = 2e-054
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -2 / +3
Query: 465 HLVGLLKGVLIPQPTRRENRLYGSKCLNISFQPSYRYIQTNSFASKIYNL 316
+LVGLL+GVLIP PT RENRL GSKCLNISFQPSYRYIQ NSFASKIYNL
Sbjct: 81 NLVGLLEGVLIP*PT*RENRL*GSKCLNISFQPSYRYIQINSFASKIYNL 230
Score = 51.2 bits (106), Expect(4) = 5e-074
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -2 / +1
Query: 120 PLVIVVYKEWSTTCHLNHVA 61
PL+IV+YKEW TTCHLNHVA
Sbjct: 601 PLIIVIYKEWGTTCHLNHVA 660
Score = 46.2 bits (95), Expect(4) = 1e-086
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 61 SDVVEMASCAPLLVNDNDQR 120
SD+VEMASCAPL VNDNDQR
Sbjct: 660 SDMVEMASCAPLFVNDNDQR 601
Score = 43.0 bits (88), Expect(3) = 3e-063
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1 / +3
Query: 121 TFGHCRLQGVEHNLPSQPRRC 59
TF HC LQ V HNLPSQP RC
Sbjct: 600 TFDHCHLQRVGHNLPSQPCRC 662
Score = 43.0 bits (88), Expect(3) = 6e-063
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2 / -3
Query: 62 ATWLRWQVVLHSL*TTMTKGGTQML 136
ATWLRWQVV HSL* TM KG + L
Sbjct: 659 ATWLRWQVVPHSL*MTMIKGKRECL 585
Score = 42.1 bits (86), Expect(4) = 1e-086
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / -3
Query: 15 SCFS*SCISHWIRKEQRR 68
SCFS*SCISHWIRK+Q R
Sbjct: 800 SCFS*SCISHWIRKKQVR 747
Score = 40.3 bits (82), Expect(4) = 5e-074
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -3 / +3
Query: 68 TSLFLSNPMRNAASAKAA 15
T+LFLSNPMRNAASAKAA
Sbjct: 747 TNLFLSNPMRNAASAKAA 800
Score = 37.6 bits (76), Expect(3) = 2e-058
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = +3 / -1
Query: 60 QRRG*DGKLCSTPCKRQ*PKVEPRCY 137
QR G*DGKLC T CK Q* KV Y
Sbjct: 661 QRHG*DGKLCPTLCK*Q*SKVNVNVY 584
Score = 36.7 bits (74), Expect(3) = 2e-054
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / +2
Query: 122 HLWSLSFTRSGAQLAISTTSL 60
+L SLSFT+SGAQLAIST SL
Sbjct: 599 YL*SLSFTKSGAQLAISTMSL 661
>gb|CW275167.1|CW275167 104_748_11404818_148_35383_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404818, DNA
sequence
Length = 650
Score = 161 bits (349), Expect(3) = 4e-075
Identities = 59/65 (90%), Positives = 63/65 (96%)
Frame = +1 / +2
Query: 136 IVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
IVFNSWQHYGCPNYW+LHFFKDSS A LHPSTIQLPNYDQLVTSAITWNNPHDGNTY+KI
Sbjct: 2 IVFNSWQHYGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDGNTYLKI 181
Query: 316 KVVNF 330
KV++F
Sbjct: 182 KVISF 196
Score = 122 bits (262), Expect(3) = 5e-062
Identities = 56/65 (86%), Positives = 57/65 (87%)
Frame = -3 / -3
Query: 329 KFTTFIFM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCH 150
K TFIF *VFPSCGLF VIADVT+ S*FGS*IVDG*S A LESLKKC IQ*FGHP*CCH
Sbjct: 195 KEITFIFR*VFPSCGLFHVIADVTN*S*FGS*IVDG*SAAPLESLKKCRIQ*FGHP*CCH 16
Query: 149 ELKTI 135
ELKTI
Sbjct: 15 ELKTI 1
Score = 117 bits (252), Expect(3) = 3e-059
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = -2 / -2
Query: 321 NLYFHVSVPIMWVIPSDSRCDQLVVVR*LNSGRMKCGAA*IFEKVQHPVIWTSIVLP*VK 142
+LYF VSVPIMW+IP DSRCDQL++V *LNSGRMKC A *IFE+V +PVIWTSIVLP*+K
Sbjct: 187 HLYFQVSVPIMWIIPRDSRCDQLIIVW*LNSGRMKCSAT*IFEEV*NPVIWTSIVLP*IK 8
Query: 141 D 139
D
Sbjct: 7 D 5
Score = 112 bits (241), Expect(3) = 4e-059
Identities = 49/65 (75%), Positives = 52/65 (80%)
Frame = +3 / +1
Query: 135 YSL*LMAALWMSKLLDAALFQRFKQRHTSSVHYSTTELRPTGHICYHLE*PT*WEHLHEN 314
Y L* MAALWMSKLLD+ L QRFK R TSSVHYSTT+L GHICYH+E* T*WEHL EN
Sbjct: 1 YCL*FMAALWMSKLLDSTLLQRFKWRCTSSVHYSTTKL*SIGHICYHVE*ST*WEHLPEN 180
Query: 315 KGCKF 329
KG F
Sbjct: 181 KGDLF 195
Score = 111 bits (238), Expect(3) = 3e-056
Identities = 49/60 (81%), Positives = 50/60 (83%)
Frame = +2 / +3
Query: 140 SLTHGSTMDVQITGCCTFSKIQAAPHFIRPLFNYRTTTNWSHLLSLGITHMMGTLT*K*R 319
SL HGSTMDVQITG T SKIQ A HFIRPLFNY+T NWSHLLS GI HMMGTLT*K*R
Sbjct: 6 SLIHGSTMDVQITGFYTSSKIQVALHFIRPLFNYQTMINWSHLLSRGIIHMMGTLT*K*R 185
Score = 110 bits (237), Expect(3) = 4e-075
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1 / +1
Query: 316 KVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKV 465
+VVNFGSKAV+LNISVTGLE DIQTFGS+KTVLTSGWLRDENSFQQPDKV
Sbjct: 265 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 414
Score = 109 bits (235), Expect(3) = 4e-059
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = +3 / +3
Query: 318 GCKFWKQSC*SEYICNWVGN*YSDIWIHKDGSHVGLAAG*ELLSTARQG 464
GCKFWKQSC*SEYICNWVG+*YSDIWI KDGSHV LA G*ELL TARQG
Sbjct: 267 GCKFWKQSC*SEYICNWVGS*YSDIWILKDGSHVRLATG*ELLPTARQG 413
Score = 105 bits (226), Expect(3) = 5e-062
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = -3 / -1
Query: 464 TLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTALLPKFTT 318
TLSGC KEFSSRSQPDVRTVF DPNV*IS SNPVTDIFRLTALLPKFTT
Sbjct: 413 TLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRLTALLPKFTT 267
Score = 102 bits (219), Expect(3) = 3e-056
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2 / +2
Query: 317 RL*ILEAKLLV*IYL*LGWKLIFRHLDP*RRFSRRVGCGMRTPFNSPTRW 466
RL*ILEAKLL+*IYL*LGWKLIFRHLDP*RRFSR+VG GMRTP NSPTR+
Sbjct: 266 RL*ILEAKLLI*IYL*LGWKLIFRHLDP*RRFSRQVGYGMRTPSNSPTRF 415
Score = 102 bits (219), Expect(3) = 3e-059
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -1 / -2
Query: 463 PCRAVERSSHPAANPT*EPSLWIQMSEYQFPTQLQIYSD*QLCFQNLQP 317
PCRAV RSSHP AN T*EPSL IQMSEYQ PTQLQIYSD*QLCFQNLQP
Sbjct: 412 PCRAVGRSSHPVANLT*EPSLRIQMSEYQLPTQLQIYSD*QLCFQNLQP 266
Score = 100 bits (215), Expect(3) = 1e-052
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -2 / -3
Query: 465 HLVGLLKGVLIPQPTRRENRLYGSKCLNISFQPSYRYIQTNSFASKIYNL 316
+LVGLL+GVLIP PT RENRL GSKCLNISFQPSYRYIQ NSFASKIYNL
Sbjct: 414 NLVGLLEGVLIP*PT*RENRL*GSKCLNISFQPSYRYIQINSFASKIYNL 265
Score = 100 bits (214), Expect(3) = 1e-052
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = -1 / -1
Query: 319 PLFSCKCSHHVGYSK**QM*PVGRSSVVE*WTDEVWRCLNL*KSAASSNLDIHSAAMS*R 140
PLFS KCSHHV YS **QM*P+ S VVE*WTDEV R LNL*+S SSNLDIHSAAM+*R
Sbjct: 185 PLFSGKCSHHVDYST**QM*PIDHSLVVE*WTDEVQRHLNL*RSVESSNLDIHSAAMN*R 6
Score = 49.0 bits (101), Expect(3) = 4e-075
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 463 VVPAASPITNAGKQMGVILNS 525
VVPAASPITNAGKQMGV+LNS
Sbjct: 529 VVPAASPITNAGKQMGVVLNS 591
Score = 48.0 bits (99), Expect(3) = 5e-062
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 524 EFNITPICLPALVIGLAAGTTLS 456
EF TPICLPALVIGLAAGTT S
Sbjct: 590 EFRTTPICLPALVIGLAAGTTYS 522
Score = 46.7 bits (96), Expect(3) = 3e-059
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 522 VQYNTHLLARVGYWTCRRHHL 460
VQ NTHLLARVGYWT RR+HL
Sbjct: 588 VQNNTHLLARVGYWTRRRNHL 526
Score = 43.9 bits (90), Expect(3) = 4e-059
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2 / +2
Query: 461 RWCRRQVQ*PTRASKWVLY*T 523
RW RR+VQ*PTRAS+WVL+*T
Sbjct: 527 RWFRRRVQ*PTRASRWVLF*T 589
Score = 43.5 bits (89), Expect(3) = 1e-052
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1 / -2
Query: 523 SSI*HPFACPRWLLDLPPAPP 461
SS HP ACPRWLLD PP PP
Sbjct: 589 SSEQHPSACPRWLLDSPPEPP 527
Score = 43.0 bits (88), Expect(3) = 3e-056
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 462 GGAGGKSNNQRGQANGCYIEL 524
GG+GG+SNNQRGQA+GC EL
Sbjct: 528 GGSGGESNNQRGQADGCCSEL 590
>gb|CX622684.1|CX622684 GABR1_65_H12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_65_H12_A002 3', mRNA sequence
Length = 802
Score = 274 bits (597), Expect = 5e-073
Identities = 110/170 (64%), Positives = 129/170 (75%)
Frame = +1 / +3
Query: 1 RGTXXXXXXXXXXXXXXXRNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYW 180
+GT RNSDVVEMASCAPL VNDND+RW+PDAIVFNSWQHYGCPNYW
Sbjct: 48 KGTLVAALAEAAFLIGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSWQHYGCPNYW 227
Query: 181 MLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKIKVVNFGSKAVSLNIS 360
MLHFFK+SS ATLHP+ IQ+ NYDQL+ SAITW N D +TY+++KVVNFG++AV LNIS
Sbjct: 228 MLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKDRSTYLRVKVVNFGNQAVDLNIS 407
Query: 361 VTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAASPITNAGKQMG 510
+ L T I+ GS + VLTS DENSFQQP+KVVP SP+ N G+QMG
Sbjct: 408 IAELPTGIKKSGSKQMVLTSSSPLDENSFQQPEKVVPVLSPMVNVGQQMG 557
Score = 225 bits (489), Expect = 1e-058
Identities = 108/169 (63%), Positives = 119/169 (70%)
Frame = -3 / -1
Query: 509 PICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTALLP 330
PIC P IGL GTT SGC KEFSS DVRT+ DP+ + V + D+ R TA LP
Sbjct: 556 PICCPTFTIGLNTGTTFSGCWKEFSSSGLLDVRTICFDPDFLMPVGSSAMDMLRSTAWLP 377
Query: 329 KFTTFIFM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCH 150
K TTF *V S QV+AD +S S* + G* VA L+SLKKCSIQ* GHP*CCH
Sbjct: 376 KLTTFTLR*VLLSLAFCQVMADASS*S*LEIWMAVG*RVAPLDSLKKCSIQ*LGHP*CCH 197
Query: 149 ELKTIASGFHLWSLSFTRSGAQLAISTTSLFLSNPMRNAASAKAAISVP 3
ELKT+ASG HL SLSFT+ GAQLAISTTSLFLSNPMRNAASA AA SVP
Sbjct: 196 ELKTMASGLHLRSLSFTKRGAQLAISTTSLFLSNPMRNAASASAATSVP 50
Score = 175 bits (379), Expect = 2e-043
Identities = 76/158 (48%), Positives = 104/158 (65%)
Frame = -2 / -3
Query: 507 HLLARVGYWTCRRHHLVGLLKGVLIPQPTRRENRLYGSKCLNISFQPSYRYIQTNSFASK 328
HLL V +W HHL+ LL+GVL+ + N L+ S+ L+ S Q Y++ +S +K
Sbjct: 554 HLLPHVHHWAQHWHHLLWLLEGVLVKRAAGC*NHLFRSRLLDASGQFRNGYVEIHSLVAK 375
Query: 327 IYNLYFHVSVPIMWVIPSDSRCDQLVVVR*LNSGRMKCGAA*IFEKVQHPVIWTSIVLP* 148
I +LY VS P++ ++PSD R QL++V L+ RMK GA E+V HP++ TSIVLP*
Sbjct: 374 IDHLYPEVSAPVLSILPSDGRRKQLIIVGDLDGCRMKGGATRFLEEV*HPIVGTSIVLP* 195
Query: 147 VKDYSIWVPPLVIVVYKEWSTTCHLNHVAVPF*SNEKC 34
V+D IW PP +IV+YK+ T CHLNH+ VPF SNEKC
Sbjct: 194 VEDDGIWAPPAIIVIYKKGCTACHLNHITVPFQSNEKC 81
Score = 114 bits (244), Expect(2) = 3e-040
Identities = 53/92 (57%), Positives = 61/92 (66%)
Frame = +3 / +2
Query: 3 RNTNSCFS*SCISHWIRKEQRRG*DGKLCSTPCKRQ*PKVEPRCYSL*LMAALWMSKLLD 182
RNT S SCISHWI KEQ G*DGKLC+ CK Q* +VEPRC+ L LMAALWMS+LLD
Sbjct: 50 RNTGSSTCRSCISHWIGKEQ*CG*DGKLCTPFCK*Q*SQVEPRCHRLQLMAALWMSQLLD 229
Query: 183 AALFQRFKQRHTSSVHYSTTELRPTGHICYHL 278
A L Q RH SS + +L +C+HL
Sbjct: 230 ATLLQGI*WRHPSSYSHPDLQL*SAACVCHHL 325
Score = 113 bits (243), Expect = 1e-024
Identities = 71/158 (44%), Positives = 77/158 (48%)
Frame = +2 / +1
Query: 35 HFSLD*KGTATWLRWQVVLHSL*TTMTKGGTQML*SLTHGSTMDVQITGCCTFSKIQAAP 214
HFSLD KGT WLRWQ V L* TM GG QM S THGSTMDV GC T S+ AP
Sbjct: 82 HFSLDWKGTVMWLRWQAVHPFL*MTMIAGGAQMPSSSTHGSTMDVPTIGCYTSSRNLVAP 261
Query: 215 HFIRPLFNYRTTTNWSHLLSLGITHMMGTLT*K*RL*ILEAKLLV*IYL*LGWKLIFRHL 394
FI T + L SLG G LT *R IL KL + Y L R L
Sbjct: 262 PFILQPSRSPTMISCLRLPSLGRMLRTGALTSG*RWSILATKLWISTYPLRNCPLASRSL 441
Query: 395 DP*RRFSRRVGCGMRTPFNSPTRWCRRQVQ*PTRASKW 508
D R F RTP +S RWC+ Q T S+W
Sbjct: 442 DRNRWF*HPAARLTRTPSSSQRRWCQC*AQW*TWGSRW 555
Score = 71.3 bits (150), Expect(2) = 3e-040
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +3 / +2
Query: 297 EHLHENKGCKFWKQSC*SEYICNWVGN*YSDIWIHKDGSHVGLAAG*ELLSTARQGGAGG 476
EHL + KG +FW+ SC S++I + + ++WI DGS++ A ELL AR+GGA
Sbjct: 344 EHLPQGKGGQFWQPSCGSQHIHCGTAHWHQEVWIETDGSNIQQPA*RELLPAAREGGASV 523
Query: 477 KSNNQRGQANG 509
+ N +RG A+G
Sbjct: 524 EPNGERGAADG 556
>gb|CW122925.1|CW122925 104_502_11110938_116_34690_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110938, DNA
sequence
Length = 637
Score = 162 bits (351), Expect(3) = 1e-057
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +1 / +3
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDG 297
RWNPDAIVFNSWQHYGCPNYW+LHFFKDSS A LHPSTIQLPNYDQLVTSAITW PHDG
Sbjct: 420 RWNPDAIVFNSWQHYGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWKYPHDG 599
Query: 298 NTYMK 312
NTY+K
Sbjct: 600 NTYLK 614
Score = 127 bits (274), Expect(3) = 1e-047
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = -2 / -3
Query: 312 FHVSVPIMWVIPSDSRCDQLVVVR*LNSGRMKCGAA*IFEKVQHPVIWTSIVLP*VKDYS 133
F VSVPIMW+ P DSRCDQL++V *LNSGRMKC A *IFE+V +PVIWTSIVLP*+KD S
Sbjct: 614 FQVSVPIMWIFPRDSRCDQLIIVG*LNSGRMKCSAT*IFEEV*NPVIWTSIVLP*IKDNS 435
Query: 132 IWVPPL 115
IWVPP+
Sbjct: 434 IWVPPI 417
Score = 125 bits (268), Expect(3) = 5e-037
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = -3 / -1
Query: 311 FM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIA 132
F *VFPSCG F VIADVT+ S* GS*IVDG*S A LESLKKC IQ*FGHP*CCHELKTIA
Sbjct: 613 FR*VFPSCGYFHVIADVTN*S*LGS*IVDG*SAAPLESLKKCRIQ*FGHP*CCHELKTIA 434
Query: 131 SGFHLWS 111
SGFHL S
Sbjct: 433 SGFHLSS 413
Score = 118 bits (253), Expect(3) = 9e-036
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = +3 / +2
Query: 120 VEPRCYSL*LMAALWMSKLLDAALFQRFKQRHTSSVHYSTTELRPTGHICYHLE*PT*WE 299
VEPRCY L* MAALWMSKLLD+ L QRFK R TSSVHYSTT+L GHICYH+E T*WE
Sbjct: 422 VEPRCYCL*FMAALWMSKLLDSTLLQRFKWRCTSSVHYSTTQL*SIGHICYHVEIST*WE 601
Query: 300 HLHENKGCKF 329
HL E K F
Sbjct: 602 HLPEIKVISF 631
Score = 114 bits (244), Expect(2) = 3e-030
Identities = 51/64 (79%), Positives = 51/64 (79%)
Frame = +2 / +1
Query: 119 GGTQML*SLTHGSTMDVQITGCCTFSKIQAAPHFIRPLFNYRTTTNWSHLLSLGITHMMG 298
GGTQML SL HGSTMDVQITG T SKIQ A HFIRPLFNY T NWSHLLS G HMMG
Sbjct: 421 GGTQMLLSLIHGSTMDVQITGFYTSSKIQVALHFIRPLFNYPTMINWSHLLSRGNIHMMG 600
Query: 299 TLT* 310
TLT*
Sbjct: 601 TLT* 612
Score = 101 bits (217), Expect(2) = 3e-026
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = -1 / -2
Query: 310 SCKCSHHVGYSK**QM*PVGRSSVVE*WTDEVWRCLNL*KSAASSNLDIHSAAMS*RL*H 131
S KCSHHV S **QM*P+ S VVE*WTDEV R LNL*+S SSNLDIHSAAM+*R *H
Sbjct: 612 SGKCSHHVDIST**QM*PIDHSWVVE*WTDEVQRHLNL*RSVESSNLDIHSAAMN*RQ*H 433
Query: 130 LGSTF 116
LGST+
Sbjct: 432 LGSTY 418
Score = 54.0 bits (112), Expect(3) = 1e-057
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3 / +2
Query: 3 RNTNSCFS*SCISHWIRKEQRR 68
RNTNSCFS*SCISHWIRKEQ R
Sbjct: 119 RNTNSCFS*SCISHWIRKEQVR 184
Score = 51.2 bits (106), Expect(3) = 1e-047
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -2 / -2
Query: 120 PLVIVVYKEWSTTCHLNHVA 61
PL+IV+YKEW TTCHLNHVA
Sbjct: 330 PLIIVIYKEWGTTCHLNHVA 271
Score = 49.0 bits (101), Expect(3) = 1e-047
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 68 TSLFLSNPMRNAASAKAAISVP 3
T+LFLSNPMRNAASAKAAISVP
Sbjct: 184 TNLFLSNPMRNAASAKAAISVP 119
Score = 46.2 bits (95), Expect(3) = 1e-057
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 61 SDVVEMASCAPLLVNDNDQR 120
SD+VEMASCAPL VNDNDQR
Sbjct: 271 SDMVEMASCAPLFVNDNDQR 330
Score = 43.0 bits (88), Expect(3) = 5e-037
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 121 TFGHCRLQGVEHNLPSQPRRC 59
TF HC LQ V HNLPSQP RC
Sbjct: 331 TFDHCHLQRVGHNLPSQPCRC 269
Score = 43.0 bits (88), Expect(3) = 9e-036
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 62 ATWLRWQVVLHSL*TTMTKGGTQML 136
ATWLRWQVV HSL* TM KG + L
Sbjct: 272 ATWLRWQVVPHSL*MTMIKGKRECL 346
Score = 37.6 bits (76), Expect(2) = 3e-030
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = +3 / +3
Query: 60 QRRG*DGKLCSTPCKRQ*PKVEPRCY 137
QR G*DGKLC T CK Q* KV Y
Sbjct: 270 QRHG*DGKLCPTLCK*Q*SKVNVNVY 347
Score = 36.7 bits (74), Expect(2) = 3e-026
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / -3
Query: 122 HLWSLSFTRSGAQLAISTTSL 60
+L SLSFT+SGAQLAIST SL
Sbjct: 332 YL*SLSFTKSGAQLAISTMSL 270
Score = 27.1 bits (53), Expect(3) = 9e-036
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 2 EEH*XXXXXXXHFSLD*KGTATW 70
EEH* HFSLD*KGT ++
Sbjct: 118 EEH**LL*LKLHFSLD*KGTGSF 186
Score = 24.4 bits (47), Expect(3) = 5e-037
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 60 VPF*SNEKC 34
VPF*SNEKC
Sbjct: 176 VPF*SNEKC 150
>gb|CD424847.1|CD424847 SA1_9_H04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_H04_A002 3', mRNA sequence
Length = 664
Score = 129 bits (277), Expect(2) = 2e-052
Identities = 48/87 (55%), Positives = 61/87 (70%)
Frame = +1 / +3
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
+NSD+V+MASCAPL VN+NDQ WNPDAIVFNSWQHYG P+YWM F++SS A +HP +
Sbjct: 42 KNSDIVQMASCAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINM 221
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKI 315
L SAITW + + +K+
Sbjct: 222 SSRYSSSLAASAITWQDSENSFLRVKV 302
Score = 98.6 bits (210), Expect(2) = 5e-036
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = -3 / -1
Query: 275 VIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIASGFHLWSLSFTR 96
VIAD S + I+ G +A L+S K IQ* G P*CC ELKTIASGFH+ SL FT
Sbjct: 262 VIADAASELEYRELILIGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTN 83
Query: 95 SGAQLAISTTSLFLSNPMRNAASAKAA 15
SGAQLAI T SLF S P+R AASA A
Sbjct: 82 SGAQLAI*TMSLFFSRPVRKAASANEA 2
Score = 97.7 bits (208), Expect(2) = 2e-052
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +3
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 279 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 458
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 459 SQLSNAGEQMQVTL 500
Score = 72.6 bits (153), Expect(2) = 5e-036
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = -3 / -1
Query: 518 NITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTA 339
++T IC PAL+ L G TL G KEFSS + PDVRTV +DP+ +P+ +I RLT
Sbjct: 499 SVTCICSPALLSWLFTGATLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTV 320
Query: 338 LLPKFTTFIFM*VF 297
PKFTTF +F
Sbjct: 319 SDPKFTTFTLRKLF 278
>gb|BE358411.1|BE358411 DG1_29_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 124 bits (266), Expect(2) = 7e-051
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1 / +1
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
+NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YWM F++SS A +HP +
Sbjct: 40 KNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINM 219
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKI 315
L SAITW + + +K+
Sbjct: 220 SSRYSSSLAASAITWQDSENSFLRVKV 300
Score = 97.7 bits (208), Expect(2) = 7e-051
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +1
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 277 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 456
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 457 SQLSNAGEQMQVTL 498
Score = 93.1 bits (198), Expect(2) = 2e-034
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = -3 / -3
Query: 275 VIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIASGFHLWSLSFTR 96
VIAD S + I+ G +A L+S K IQ* G P*CC ELKTIASGFH+ SL FT
Sbjct: 260 VIADAASELEYRELILIGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTN 81
Query: 95 SGAQLAISTTSLFLSNPMRNAASA 24
SGA LAI T SLF S P+R AASA
Sbjct: 80 SGA*LAI*TMSLFFSRPVRKAASA 9
Score = 72.6 bits (153), Expect(2) = 2e-034
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = -3 / -3
Query: 518 NITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTA 339
++T IC PAL+ L G TL G KEFSS + PDVRTV +DP+ +P+ +I RLT
Sbjct: 497 SVTCICSPALLSWLFTGATLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTV 318
Query: 338 LLPKFTTFIFM*VF 297
PKFTTF +F
Sbjct: 317 SDPKFTTFTLRKLF 276
>gb|BG323188.1|BG323188 EM1_15_H09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 124 bits (266), Expect(2) = 7e-051
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1 / +3
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
+NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YWM F++SS A +HP +
Sbjct: 39 KNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINM 218
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKI 315
L SAITW + + +K+
Sbjct: 219 SSRYSSSLAASAITWQDSENSFLRVKV 299
Score = 97.7 bits (208), Expect(2) = 7e-051
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +3
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 276 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 455
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 456 SQLSNAGEQMQVTL 497
Score = 93.1 bits (198), Expect(2) = 2e-034
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = -3 / -1
Query: 275 VIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIASGFHLWSLSFTR 96
VIAD S + I+ G +A L+S K IQ* G P*CC ELKTIASGFH+ SL FT
Sbjct: 259 VIADAASELEYRELILIGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTN 80
Query: 95 SGAQLAISTTSLFLSNPMRNAASA 24
SGA LAI T SLF S P+R AASA
Sbjct: 79 SGA*LAI*TMSLFFSRPVRKAASA 8
Score = 72.6 bits (153), Expect(2) = 2e-034
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = -3 / -1
Query: 518 NITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTA 339
++T IC PAL+ L G TL G KEFSS + PDVRTV +DP+ +P+ +I RLT
Sbjct: 496 SVTCICSPALLSWLFTGATLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTV 317
Query: 338 LLPKFTTFIFM*VF 297
PKFTTF +F
Sbjct: 316 SDPKFTTFTLRKLF 275
>gb|CD424232.1|CD424232 SA1_4_H05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H05_A002 3', mRNA sequence
Length = 632
Score = 124 bits (266), Expect(2) = 7e-051
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1 / +3
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
+NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YWM F++SS A +HP +
Sbjct: 3 KNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINM 182
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKI 315
L SAITW + + +K+
Sbjct: 183 SSRYSSSLAASAITWQDSENSFLRVKV 263
Score = 97.7 bits (208), Expect(2) = 7e-051
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +3
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 240 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 419
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 420 SQLSNAGEQMQVTL 461
Score = 78.1 bits (165), Expect(2) = 6e-030
Identities = 43/73 (58%), Positives = 48/73 (65%)
Frame = -3 / -2
Query: 275 VIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIASGFHLWSLSFTR 96
VIAD S + I+ G +A L+S K IQ* G P*CC ELKTIASGFH+ SL FT
Sbjct: 223 VIADAASELEYRELILIGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTN 44
Query: 95 SGAQLAISTTSLF 57
SGA LAI T SLF
Sbjct: 43 SGA*LAI*TMSLF 5
Score = 72.6 bits (153), Expect(2) = 6e-030
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = -3 / -2
Query: 518 NITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTA 339
++T IC PAL+ L G TL G KEFSS + PDVRTV +DP+ +P+ +I RLT
Sbjct: 460 SVTCICSPALLSWLFTGATLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTV 281
Query: 338 LLPKFTTFIFM*VF 297
PKFTTF +F
Sbjct: 280 SDPKFTTFTLRKLF 239
>gb|BF656911.1|BF656911 OV2_22_E11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 124 bits (266), Expect(2) = 7e-051
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1 / +2
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
+NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YWM F++SS A +HP +
Sbjct: 38 KNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINM 217
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKI 315
L SAITW + + +K+
Sbjct: 218 SSRYSSSLAASAITWQDSENSFLRVKV 298
Score = 97.7 bits (208), Expect(2) = 7e-051
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +2
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 275 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 454
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 455 SQLSNAGEQMQVTL 496
Score = 93.1 bits (198), Expect(2) = 2e-034
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = -3 / -2
Query: 275 VIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIASGFHLWSLSFTR 96
VIAD S + I+ G +A L+S K IQ* G P*CC ELKTIASGFH+ SL FT
Sbjct: 258 VIADAASELEYRELILIGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTN 79
Query: 95 SGAQLAISTTSLFLSNPMRNAASA 24
SGA LAI T SLF S P+R AASA
Sbjct: 78 SGA*LAI*TMSLFFSRPVRKAASA 7
Score = 72.6 bits (153), Expect(2) = 2e-034
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = -3 / -2
Query: 518 NITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTA 339
++T IC PAL+ L G TL G KEFSS + PDVRTV +DP+ +P+ +I RLT
Sbjct: 495 SVTCICSPALLSWLFTGATLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTV 316
Query: 338 LLPKFTTFIFM*VF 297
PKFTTF +F
Sbjct: 315 SDPKFTTFTLRKLF 274
>gb|CW040084.1|CW040084 104_273_10505880_114_30266 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505880, DNA
sequence
Length = 647
Score = 139 bits (300), Expect(3) = 1e-048
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = +1 / +1
Query: 127 PDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTY 306
PDAIVFNSWQHYGCPNYWMLHFFK+SS ATLHP+ IQ+ NYDQL+ SAITW N D +TY
Sbjct: 1 PDAIVFNSWQHYGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKDRSTY 180
Query: 307 MKIKVVN 327
++IKV++
Sbjct: 181 LRIKVID 201
Score = 79.0 bits (167), Expect(3) = 2e-027
Identities = 40/64 (62%), Positives = 45/64 (70%)
Frame = -3 / -1
Query: 320 TFIFM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELK 141
TFI *V S QV+AD +S S* + G* VA L+SLKKCSIQ* GHP*CCHELK
Sbjct: 194 TFILR*VLLSLAFCQVMADASS*S*LEIWMAVG*RVAPLDSLKKCSIQ*LGHP*CCHELK 15
Query: 140 TIAS 129
T+AS
Sbjct: 14 TMAS 3
Score = 65.8 bits (138), Expect(3) = 1e-048
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +1 / +3
Query: 313 IKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKV 465
++VVNFG++AV LNIS+ L T I+ GS + VLTS DENSFQQP+KV
Sbjct: 288 LQVVNFGNQAVDLNISIAELPTGIKKSGSKQMVLTSSSPLDENSFQQPEKV 440
Score = 54.9 bits (114), Expect(3) = 2e-027
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -3 / -2
Query: 464 TLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTALLPKFTT 318
T SGC KEFSS DVRT+ DP+ + V + D+ R TA LPK TT
Sbjct: 439 TFSGCWKEFSSSGLLDVRTICFDPDFLMPVGSSAMDMLRSTAWLPKLTT 293
Score = 28.5 bits (56), Expect(3) = 1e-048
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 460 KVVPAASPITNAGKQMG 510
+VVP SP+ N G+QMG
Sbjct: 569 QVVPVLSPMVNVGQQMG 619
Score = 27.5 bits (54), Expect(3) = 2e-027
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 509 PICLPALVIGLAAGTT 462
PIC P IGL GTT
Sbjct: 618 PICCPTFTIGLNTGTT 571
>gb|CW499260.1|CW499260 fsbb001f293o20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293o20, DNA
sequence
Length = 731
Score = 147 bits (317), Expect(3) = 3e-045
Identities = 52/70 (74%), Positives = 62/70 (88%)
Frame = +1 / +3
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDG 297
RW+PDAIVFNSWQHYGCPNYWMLHFFK+SS ATLHP+ IQ+ NYDQL+ SAITW N D
Sbjct: 369 RWSPDAIVFNSWQHYGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKDR 548
Query: 298 NTYMKIKVVN 327
+TY++IKV++
Sbjct: 549 STYLRIKVID 578
Score = 87.7 bits (186), Expect(2) = 7e-022
Identities = 44/70 (62%), Positives = 49/70 (70%)
Frame = -3 / -2
Query: 320 TFIFM*VFPSCGLFQVIADVTSWS*FGS*IVDG*SVALLESLKKCSIQ*FGHP*CCHELK 141
TFI *V S QV+AD +S S* + G* VA L+SLKKCSIQ* GHP*CCHELK
Sbjct: 571 TFILR*VLLSLAFCQVMADASS*S*LEIWMAVG*RVAPLDSLKKCSIQ*LGHP*CCHELK 392
Query: 140 TIASGFHLWS 111
T+ASG HL S
Sbjct: 391 TMASGLHLIS 362
Score = 45.8 bits (94), Expect(3) = 3e-045
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 61 SDVVEMASCAPLLVNDNDQR 120
SDVVEMASCAPL VNDND+R
Sbjct: 89 SDVVEMASCAPLFVNDNDRR 148
Score = 37.6 bits (76), Expect(2) = 7e-022
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / -3
Query: 122 HLWSLSFTRSGAQLAISTTSL 60
+L SLSFT+ GAQLAISTTSL
Sbjct: 150 YLRSLSFTKRGAQLAISTTSL 88
Score = 29.8 bits (59), Expect(3) = 3e-045
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 322 VNFGSKAVSLNISVTGLET 378
VNFG++AV LNIS+ L T
Sbjct: 675 VNFGNQAVDLNISIAELPT 731
>gb|BG487902.1|BG487902 RHIZ2_60_G05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 562
Score = 103 bits (220), Expect(2) = 4e-043
Identities = 39/71 (54%), Positives = 47/71 (66%)
Frame = +1 / +2
Query: 103 NDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWN 282
N NDQ WNPDAIVFNSWQHYG P+YWM F++SS A LHP+TI L SAITW
Sbjct: 2 NTNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMLHPTTISSSYSGSLAASAITWQ 181
Query: 283 NPHDGNTYMKI 315
+ + +K+
Sbjct: 182 DSENSFLRVKV 214
Score = 92.7 bits (197), Expect(2) = 4e-043
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +1 / +2
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KV+NFGS AV+L IS +GL+ I GS TVLTS + DENSF P KVVP
Sbjct: 191 NSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSANVMDENSFSNPTKVVPVK 370
Query: 478 SPITNAGKQMGVIL 519
S ++NA +QM V L
Sbjct: 371 SDMSNAAEQMQVTL 412
Score = 74.0 bits (156), Expect(2) = 2e-026
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = -3 / -2
Query: 518 NITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTA 339
N+T IC AL+I L GTTL G KEFSS + DVRTV +DP I +P+ +I R+TA
Sbjct: 411 NVTCICSAALLISLFTGTTLVGLLKEFSSITFADVRTVAVDPRALILAWSPLVEIVRVTA 232
Query: 338 LLPKFTTFIFM*VF 297
PKF TF +F
Sbjct: 231 SDPKFMTFTLRKLF 190
Score = 65.4 bits (137), Expect(2) = 2e-026
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -3 / -2
Query: 233 IVDG*SVALLESLKKCSIQ*FGHP*CCHELKTIASGFHLWSLSF 102
IV G ++A L+S K IQ* G P*CC ELKTIASGFH+WSL F
Sbjct: 132 IVVGCNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHVWSLVF 1
>gb|CF072232.1|CF072232 FE1_6_H10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_6_H10_A002 3', mRNA sequence
Length = 427
Score = 161 bits (349), Expect = 5e-039
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1 / +3
Query: 307 MKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAASPI 486
+KIKVVNFGSKAV+LNISVTGLE DIQTFGS+KTVLTSGWLRDENSFQQPDKVVPAASPI
Sbjct: 3 LKIKVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKVVPAASPI 182
Query: 487 TNAGKQMGVILNS 525
TNAGKQMGV+LNS
Sbjct: 183 TNAGKQMGVVLNS 221
Score = 154 bits (333), Expect = 5e-037
Identities = 67/72 (93%), Positives = 67/72 (93%)
Frame = -3 / -1
Query: 524 EFNITPICLPALVIGLAAGTTLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRL 345
EF TPICLPALVIGLAAGTTLSGC KEFSSRSQPDVRTVF DPNV*IS SNPVTDIFRL
Sbjct: 220 EFRTTPICLPALVIGLAAGTTLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRL 41
Query: 344 TALLPKFTTFIF 309
TALLPKFTTFIF
Sbjct: 40 TALLPKFTTFIF 5
Score = 154 bits (332), Expect = 6e-037
Identities = 62/72 (86%), Positives = 66/72 (91%)
Frame = +3 / +2
Query: 309 ENKGCKFWKQSC*SEYICNWVGN*YSDIWIHKDGSHVGLAAG*ELLSTARQGGAGGKSNN 488
ENKGCKFWKQSC*SEYICNWVG+*YSDIWI KDGSHV LA G*ELL TARQGG+GG+SNN
Sbjct: 5 ENKGCKFWKQSC*SEYICNWVGS*YSDIWILKDGSHVRLATG*ELLPTARQGGSGGESNN 184
Query: 489 QRGQANGCYIEL 524
QRGQA+GC EL
Sbjct: 185 QRGQADGCCPEL 220
Score = 147 bits (318), Expect = 5e-035
Identities = 63/71 (88%), Positives = 65/71 (91%)
Frame = -2 / -3
Query: 522 VQYNTHLLARVGYWTCRRHHLVGLLKGVLIPQPTRRENRLYGSKCLNISFQPSYRYIQTN 343
VQ NTHLLARVGYWT RR+HLVGLL+GVLIP PT RENRL GSKCLNISFQPSYRYIQ N
Sbjct: 218 VQDNTHLLARVGYWTRRRNHLVGLLEGVLIP*PT*RENRL*GSKCLNISFQPSYRYIQIN 39
Query: 342 SFASKIYNLYF 310
SFASKIYNLYF
Sbjct: 38 SFASKIYNLYF 6
Score = 145 bits (314), Expect = 2e-034
Identities = 60/68 (88%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 511 HPFACPRWLLDLPPAPPCRAVERSSHPAANPT*EPSLWIQMSEYQFPTQLQIYSD*QLCF 332
HP ACPRWLLD PP PPCRAV RSSHP AN T*EPSL IQMSEYQ PTQLQIYSD*QLCF
Sbjct: 207 HPSACPRWLLDSPPEPPCRAVGRSSHPVANLT*EPSLRIQMSEYQLPTQLQIYSD*QLCF 28
Query: 331 QNLQPLFS 308
QNLQPLFS
Sbjct: 27 QNLQPLFS 4
Score = 144 bits (310), Expect = 7e-034
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = +2 / +1
Query: 305 T*K*RL*ILEAKLLV*IYL*LGWKLIFRHLDP*RRFSRRVGCGMRTPFNSPTRWCRRQVQ 484
T*K*RL*ILEAKLL+*IYL*LGWKLIFRHLDP*RRFSR+VG GMRTP NSPTRW RR+VQ
Sbjct: 1 T*K*RL*ILEAKLLI*IYL*LGWKLIFRHLDP*RRFSRQVGYGMRTPSNSPTRWFRRRVQ 180
Query: 485 *PTRASKWVLY*T 523
*PTRAS+WVL *T
Sbjct: 181 *PTRASRWVLS*T 219
>gb|CD427202.1|CD427202 SA1_18_E02.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_E02_A002 3', mRNA sequence
Length = 485
Score = 99 bits (213), Expect(3) = 2e-033
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +3 / +1
Query: 309 ENKGCKFWKQSC*SEYICNWVGN*YSDIWIHKDGSHVGLAAG 434
ENKGCKFWKQSC*SEYICNWVG+*YSDIWI KDGSHV LA G
Sbjct: 1 ENKGCKFWKQSC*SEYICNWVGS*YSDIWILKDGSHVRLATG 126
Score = 91.3 bits (194), Expect(3) = 2e-029
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = -3 / -3
Query: 431 RSQPDVRTVFMDPNV*ISVSNPVTDIFRLTALLPKFTTFIF 309
RSQPDVRTVF DPNV*IS SNPVTDIFRLTALLPKFTTFIF
Sbjct: 123 RSQPDVRTVFKDPNV*ISASNPVTDIFRLTALLPKFTTFIF 1
Score = 90.0 bits (191), Expect(2) = 6e-027
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1 / +2
Query: 310 KIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLR 432
KIKVVNFGSKAV+LNISVTGLE DIQTFGS+KTVLTSGWLR
Sbjct: 2 KIKVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLR 124
Score = 87.7 bits (186), Expect(2) = 6e-027
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -2 / -2
Query: 432 PQPTRRENRLYGSKCLNISFQPSYRYIQTNSFASKIYNLYF 310
P PT RENRL GSKCLNISFQPSYRYIQ NSFASKIYNLYF
Sbjct: 124 P*PT*RENRL*GSKCLNISFQPSYRYIQINSFASKIYNLYF 2
Score = 85.4 bits (181), Expect(2) = 8e-026
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -1 / -1
Query: 433 PAANPT*EPSLWIQMSEYQFPTQLQIYSD*QLCFQNLQPLF 311
P AN T*EPSL IQMSEYQ PTQLQIYSD*QLCFQNLQPLF
Sbjct: 125 PVANLT*EPSLRIQMSEYQLPTQLQIYSD*QLCFQNLQPLF 3
Score = 84.5 bits (179), Expect(2) = 7e-025
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2 / +3
Query: 311 K*RL*ILEAKLLV*IYL*LGWKLIFRHLDP*RRFSRRVGCGMRTPF 448
K*RL*ILEAKLL+*IYL*LGWKLIFRHLDP*RRFSR+VG G F
Sbjct: 3 K*RL*ILEAKLLI*IYL*LGWKLIFRHLDP*RRFSRQVGYGDENSF 140
Score = 57.6 bits (120), Expect(3) = 2e-033
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +1 / +1
Query: 451 QPDKVVPAASPITNAGKQMGVILNS 525
+PDKVVPAASPITNAGKQMGV+LNS
Sbjct: 145 KPDKVVPAASPITNAGKQMGVVLNS 219
Score = 53.5 bits (111), Expect(3) = 2e-029
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2 / -3
Query: 522 VQYNTHLLARVGYWTCRRHHLVGLL 448
VQ NTHLLARVGYWT RR+HLVGL+
Sbjct: 216 VQNNTHLLARVGYWTRRRNHLVGLV 142
Score = 53.1 bits (110), Expect(2) = 6e-027
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / -1
Query: 524 EFNITPICLPALVIGLAAGTTLSG 453
EF TPICLPALVIGLAAGTTLSG
Sbjct: 218 EFRTTPICLPALVIGLAAGTTLSG 147
Score = 51.7 bits (107), Expect(2) = 8e-026
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -1 / -2
Query: 523 SSI*HPFACPRWLLDLPPAPPCRA 452
SS HP ACPRWLLD PP PPCRA
Sbjct: 217 SSEQHPSACPRWLLDSPPEPPCRA 146
Score = 51.2 bits (106), Expect(2) = 6e-027
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = +2 / +2
Query: 452 SPTRWCRRQVQ*PTRASKWVLY*T 523
SPTRW RR+VQ*PTRAS+WVL+*T
Sbjct: 146 SPTRWFRRRVQ*PTRASRWVLF*T 217
Score = 49.4 bits (102), Expect(2) = 7e-025
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 453 ARQGGAGGKSNNQRGQANGCYIEL 524
ARQGG+GG+SNNQRGQA+GC EL
Sbjct: 147 ARQGGSGGESNNQRGQADGCCSEL 218
Score = 23.4 bits (45), Expect(3) = 2e-033
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 419 RVGCGMRTPFNSPTR 463
R+ GMRTP N P +
Sbjct: 112 RLATGMRTPSNKPDK 156
Score = 22.1 bits (42), Expect(3) = 2e-029
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 462 LVGLLKGVLIP 430
L GLL+GVLIP
Sbjct: 155 LSGLLEGVLIP 123
>gb|CF072326.1|CF072326 FE1_2_H07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_2_H07_A002 3', mRNA sequence
Length = 544
Score = 97.7 bits (208), Expect(2) = 1e-032
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +3
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 150 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 329
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 330 SQLSNAGEQMQVTL 371
Score = 63.1 bits (132), Expect(2) = 1e-032
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +1 / +3
Query: 145 NSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
NSWQHYG P+YWM F++SS A +HP + L AITW + + +K+
Sbjct: 3 NSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAAFAITWQDSENSFLRVKV 173
>gb|CW429242.1|CW429242 fsbb001f142g06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f142g06, DNA
sequence
Length = 772
Score = 110 bits (237), Expect(2) = 2e-032
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1 / +2
Query: 316 KVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKV 465
+VVNFGSKAV+LNISVTGLE DIQTFGS+KTVLTSGWLRDENSFQQPDKV
Sbjct: 74 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 223
Score = 109 bits (235), Expect(2) = 7e-031
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = +3 / +1
Query: 318 GCKFWKQSC*SEYICNWVGN*YSDIWIHKDGSHVGLAAG*ELLSTARQG 464
GCKFWKQSC*SEYICNWVG+*YSDIWI KDGSHV LA G*ELL TARQG
Sbjct: 76 GCKFWKQSC*SEYICNWVGS*YSDIWILKDGSHVRLATG*ELLPTARQG 222
Score = 105 bits (226), Expect(2) = 7e-031
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = -3 / -2
Query: 464 TLSGC*KEFSSRSQPDVRTVFMDPNV*ISVSNPVTDIFRLTALLPKFTT 318
TLSGC KEFSSRSQPDVRTVF DPNV*IS SNPVTDIFRLTALLPKFTT
Sbjct: 222 TLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRLTALLPKFTT 76
Score = 102 bits (219), Expect(2) = 2e-029
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -1 / -3
Query: 463 PCRAVERSSHPAANPT*EPSLWIQMSEYQFPTQLQIYSD*QLCFQNLQP 317
PCRAV RSSHP AN T*EPSL IQMSEYQ PTQLQIYSD*QLCFQNLQP
Sbjct: 221 PCRAVGRSSHPVANLT*EPSLRIQMSEYQLPTQLQIYSD*QLCFQNLQP 75
Score = 102 bits (219), Expect(2) = 2e-028
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2 / +3
Query: 317 RL*ILEAKLLV*IYL*LGWKLIFRHLDP*RRFSRRVGCGMRTPFNSPTRW 466
RL*ILEAKLL+*IYL*LGWKLIFRHLDP*RRFSR+VG GMRTP NSPTR+
Sbjct: 75 RL*ILEAKLLI*IYL*LGWKLIFRHLDP*RRFSRQVGYGMRTPSNSPTRF 224
Score = 100 bits (215), Expect(2) = 5e-028
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -2 / -1
Query: 465 HLVGLLKGVLIPQPTRRENRLYGSKCLNISFQPSYRYIQTNSFASKIYNL 316
+LVGLL+GVLIP PT RENRL GSKCLNISFQPSYRYIQ NSFASKIYNL
Sbjct: 223 NLVGLLEGVLIP*PT*RENRL*GSKCLNISFQPSYRYIQINSFASKIYNL 74
Score = 49.0 bits (101), Expect(2) = 2e-032
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 463 VVPAASPITNAGKQMGVILNS 525
VVPAASPITNAGKQMGV+LNS
Sbjct: 338 VVPAASPITNAGKQMGVVLNS 400
Score = 48.0 bits (99), Expect(2) = 7e-031
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 524 EFNITPICLPALVIGLAAGTTLS 456
EF TPICLPALVIGLAAGTT S
Sbjct: 399 EFRTTPICLPALVIGLAAGTTYS 331
Score = 46.7 bits (96), Expect(2) = 2e-029
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 522 VQYNTHLLARVGYWTCRRHHL 460
VQ NTHLLARVGYWT RR+HL
Sbjct: 397 VQNNTHLLARVGYWTRRRNHL 335
Score = 43.9 bits (90), Expect(2) = 7e-031
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2 / +3
Query: 461 RWCRRQVQ*PTRASKWVLY*T 523
RW RR+VQ*PTRAS+WVL+*T
Sbjct: 336 RWFRRRVQ*PTRASRWVLF*T 398
Score = 43.5 bits (89), Expect(2) = 5e-028
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1 / -3
Query: 523 SSI*HPFACPRWLLDLPPAPP 461
SS HP ACPRWLLD PP PP
Sbjct: 398 SSEQHPSACPRWLLDSPPEPP 336
Score = 43.0 bits (88), Expect(2) = 2e-028
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 462 GGAGGKSNNQRGQANGCYIEL 524
GG+GG+SNNQRGQA+GC EL
Sbjct: 337 GGSGGESNNQRGQADGCCSEL 399
>gb|CW391719.1|CW391719 fsbb001f078a05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f078a05, DNA
sequence
Length = 476
Score = 75.4 bits (159), Expect(3) = 8e-032
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1 / -3
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHF 192
RWNPDAIVFNSWQHYGCPNYW+LHF
Sbjct: 75 RWNPDAIVFNSWQHYGCPNYWILHF 1
Score = 63.5 bits (133), Expect(3) = 2e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 191 KCSIQ*FGHP*CCHELKTIASGFHLWS 111
KC IQ*FGHP*CCHELKTIASGFHL S
Sbjct: 2 KCRIQ*FGHP*CCHELKTIASGFHLSS 82
Score = 54.0 bits (112), Expect(3) = 8e-032
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3 / -2
Query: 3 RNTNSCFS*SCISHWIRKEQRR 68
RNTNSCFS*SCISHWIRKEQ R
Sbjct: 376 RNTNSCFS*SCISHWIRKEQVR 311
Score = 51.2 bits (106), Expect(3) = 2e-028
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -2 / +3
Query: 120 PLVIVVYKEWSTTCHLNHVA 61
PL+IV+YKEW TTCHLNHVA
Sbjct: 165 PLIIVIYKEWGTTCHLNHVA 224
Score = 49.0 bits (101), Expect(3) = 2e-028
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / +2
Query: 68 TSLFLSNPMRNAASAKAAISVP 3
T+LFLSNPMRNAASAKAAISVP
Sbjct: 311 TNLFLSNPMRNAASAKAAISVP 376
Score = 46.2 bits (95), Expect(3) = 8e-032
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 61 SDVVEMASCAPLLVNDNDQR 120
SD+VEMASCAPL VNDNDQR
Sbjct: 224 SDMVEMASCAPLFVNDNDQR 165
>gb|CD463051.1|CD463051 ETH1_42_E06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_E06_A002 3', mRNA sequence
Length = 418
Score = 124 bits (266), Expect(2) = 1e-031
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1 / +3
Query: 55 RNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTI 234
+NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YWM F++SS AT+HP +
Sbjct: 3 KNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGATIHPINM 182
Query: 235 QLPNYDQLVTSAITWNNPHDGNTYMKI 315
L AITW + + +K+
Sbjct: 183 SSRYSSSLAAFAITWQDSENSFLRVKV 263
Score = 33.0 bits (66), Expect(2) = 1e-031
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 298 NTYMKIKVVNFGSKAVSLNISV 363
N+++++KVVNFGS VSL+ S+
Sbjct: 240 NSFLRVKVVNFGSDTVSLSPSL 305
>gb|CW316446.1|CW316446 104_807_11472898_148_35847_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472898, DNA
sequence
Length = 646
Score = 88.6 bits (188), Expect(3) = 2e-031
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = +1 / -2
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNN 285
RWNPDAIVFNSWQHYG P+YWM F++SS A +HP + L SAITW +
Sbjct: 414 RWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQD 247
Score = 51.2 bits (106), Expect(3) = 2e-031
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 313 IKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSG 423
++VVNFGS VSL IS +GL+ + + GS TVLTSG
Sbjct: 115 VQVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSG 5
Score = 36.2 bits (73), Expect(3) = 2e-031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 61 SDVVEMASCAPLLVNDNDQ 117
SD+V+MAS APL VN+NDQ
Sbjct: 560 SDIVQMASYAPLFVNNNDQ 504
>gb|BM327869.1|BM327869 PIC1_18_E04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 551
Score = 97.7 bits (208), Expect(2) = 1e-030
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +3
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 141 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 320
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 321 SQLSNAGEQMQVTL 362
Score = 56.2 bits (117), Expect(2) = 1e-030
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1 / +3
Query: 154 QHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
QHYG P+YWM F++SS A +HP + L SAITW + + +K+
Sbjct: 3 QHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 164
>gb|BG357415.1|BG357415 OV2_29_F03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 97.7 bits (208), Expect(2) = 1e-030
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +1
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 139 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 318
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 319 SQLSNAGEQMQVTL 360
Score = 56.2 bits (117), Expect(2) = 1e-030
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1 / +1
Query: 154 QHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
QHYG P+YWM F++SS A +HP + L SAITW + + +K+
Sbjct: 1 QHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 162
>gb|BG558740.1|BG558740 RHIZ2_59_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 92.7 bits (197), Expect(2) = 3e-028
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +1 / +2
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KV+NFGS AV+L IS +GL+ I GS TVLTS + DENSF P KVVP
Sbjct: 131 NSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSANVMDENSFSNPTKVVPVK 310
Query: 478 SPITNAGKQMGVIL 519
S ++NA +QM V L
Sbjct: 311 SDMSNAAEQMQVTL 352
Score = 53.1 bits (110), Expect(2) = 3e-028
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1 / +2
Query: 163 GCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
G P+YWM F++SS A LHP+TI L SAITW + + +K+
Sbjct: 2 GTPSYWMQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKV 154
>gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 138609
Score = 90.0 bits (191), Expect(3) = 6e-028
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = +1 / -2
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDG 297
+W PDAIVFNSWQ YG P+YWM FF++SS A HP I D L SAITW + +
Sbjct: 6128 KWIPDAIVFNSWQQYGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNS 5949
Query: 298 NTYMKIKVVN 327
+K+K N
Sbjct: 5948 FLRVKVKETN 5919
Score = 45.3 bits (93), Expect(3) = 6e-028
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / -2
Query: 313 IKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKV 465
+++VNFG AV+L I L + GS TVLTS + ENSF+ P V
Sbjct: 5813 LQIVNFGPDAVNLTIRAHQLRAAVDARGSRVTVLTSSDVMHENSFRNPRNV 5661
Score = 27.1 bits (53), Expect(3) = 6e-028
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 64 DVVEMASCAPLLVNDN 111
D+V+MA APL VN+N
Sbjct: 6283 DIVQMACYAPLFVNNN 6236
>gb|CW360333.1|CW360333 fsbb001f028g01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g01, DNA
sequence
Length = 730
Score = 90.0 bits (191), Expect(3) = 7e-028
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 118 RWNPDAIVFNSWQHYGCPNYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDG 297
+W PDAIVFNSWQ YG P+YWM FF++SS A HP I D L SAITW + +
Sbjct: 215 KWIPDAIVFNSWQQYGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNS 394
Query: 298 NTYMKIKVVN 327
+K+K N
Sbjct: 395 FLRVKVKETN 424
Score = 45.3 bits (93), Expect(3) = 7e-028
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / +2
Query: 313 IKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKV 465
+++VNFG AV+L I L + GS TVLTS + ENSF+ P V
Sbjct: 530 LQIVNFGPDAVNLTIRAHQLRAAVDARGSRVTVLTSSDVMHENSFRNPRNV 682
Score = 27.1 bits (53), Expect(3) = 7e-028
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 64 DVVEMASCAPLLVNDN 111
D+V+MA APL VN+N
Sbjct: 60 DIVQMACYAPLFVNNN 107
>gb|CF072848.1|CF072848 FE1_26_E01.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_26_E01_A002 3', mRNA sequence
Length = 514
Score = 97.7 bits (208), Expect(2) = 3e-026
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +1
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 121 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 300
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 301 SQLSNAGEQMQVTL 342
Score = 41.7 bits (85), Expect(2) = 3e-026
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1 / +1
Query: 172 NYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
+YWM F++SS A +HP + L SAITW + + +K+
Sbjct: 1 SYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 144
>gb|BG556485.1|BG556485 EM1_37_G04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 337
Score = 96.3 bits (205), Expect(2) = 4e-026
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = +1 / +2
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 122 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 301
Query: 478 SPITNAGKQMGV 513
S ++NAG+QM V
Sbjct: 302 SQLSNAGEQMQV 337
Score = 41.7 bits (85), Expect(2) = 4e-026
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1 / +2
Query: 172 NYWMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
+YWM F++SS A +HP + L SAITW + + +K+
Sbjct: 2 SYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 145
>gb|BM331190.1|BM331190 PIC1_70_G09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 627
Score = 97.7 bits (208), Expect(2) = 3e-025
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +1 / +2
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KVVNFGS VSL IS +GL+ + + GS TVLTSG + DENSF P+KV P
Sbjct: 116 NSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVK 295
Query: 478 SPITNAGKQMGVIL 519
S ++NAG+QM V L
Sbjct: 296 SQLSNAGEQMQVTL 337
Score = 38.0 bits (77), Expect(2) = 3e-025
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1 / +2
Query: 178 WMLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
WM F++SS A +HP + L SAITW + + +K+
Sbjct: 2 WMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 139
>gb|BQ656040.1|BQ656040 pRC0338 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0338, mRNA sequence
Length = 487
Score = 94.5 bits (201), Expect(2) = 1e-024
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1 / +2
Query: 298 NTYMKIKVVNFGSKAVSLNISVTGLETDIQTFGSIKTVLTSGWLRDENSFQQPDKVVPAA 477
N+++++KV+NFGS AV+L IS TGL+ I GS TVLTS + DENSF P KVVP
Sbjct: 113 NSFLRVKVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKVVPVK 292
Query: 478 SPITNAGKQMGVIL 519
S ++NA +QM V L
Sbjct: 293 SDMSNAAEQMQVTL 334
Score = 38.9 bits (79), Expect(2) = 1e-024
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1 / +2
Query: 181 MLHFFKDSSSATLHPSTIQLPNYDQLVTSAITWNNPHDGNTYMKI 315
M F++SS A LHP+TI L SAITW + + +K+
Sbjct: 2 MQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKV 136
>gb|BG933148.1|BG933148 WS1_29_G10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 113 bits (242), Expect = 2e-024
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = +1 / +2
Query: 1 RGTXXXXXXXXXXXXXXXRNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYW 180
RG+ +NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YW
Sbjct: 347 RGSLLASLAEAAFLTGLEKNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYW 526
Query: 181 MLHFFKDSSSATLHP 225
M F++SS A +HP
Sbjct: 527 MQTLFRESSGAMIHP 571
>gb|CD234501.1|CD234501 SS1_27_C11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_27_C11_A012 5', mRNA sequence
Length = 673
Score = 113 bits (242), Expect = 2e-024
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = +1 / +3
Query: 1 RGTXXXXXXXXXXXXXXXRNSDVVEMASCAPLLVNDNDQRWNPDAIVFNSWQHYGCPNYW 180
RG+ +NSD+V+MAS APL VN+NDQ WNPDAIVFNSWQHYG P+YW
Sbjct: 405 RGSLLASLAEAAFLTGLEKNSDIVQMASYAPLFVNNNDQTWNPDAIVFNSWQHYGTPSYW 584
Query: 181 MLHFFKDSSSATLHP 225
M F++SS A +HP
Sbjct: 585 MQTLFRESSGAMIHP 629
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.316 0.130 0.405
Matrix: BLOSUM62
Number of Hits to DB: 739,708,099
Number of Sequences: 832831
Number of extensions: 11113156
Number of successful extensions: 139392
Number of sequences better than 1.0e-020: 33
length of database: 163,786,556
effective HSP length: 52
effective length of database: 120,479,344
effective search space used: 14698479968
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)