TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF25f04.yg.3.3
(1599 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD205545.1|CD205545 HS1_14_B05.g1_A012 Heat-shocked seed... 484 e-135
gb|BI074580.1|BI074580 IP1_13_G03.b1_A002 Immature pannicle... 403 e-111
gb|CB924760.1|CB924760 ABA1_1_G09.g1_A012 Abscisic acid-tre... 316 8e-097
gb|CD229690.1|CD229690 CCC1_18_A04.g1_A007 Callus culture/c... 264 2e-069
gb|CF761156.1|CF761156 DSAF1_71_H03.b1_A011 Drought-stresse... 93 2e-058
gb|BI074265.1|BI074265 IP1_13_G03.g1_A002 Immature pannicle... 79 1e-056
gb|CW483252.1|CW483252 fsbb001f244m21k0 Sorghum methylation... 149 6e-050
gb|BE362112.1|BE362112 DG1_84_A07.b1_A002 Dark Grown 1 (DG1... 177 3e-043
gb|CW330971.1|CW330971 104_828_11480660_148_36021_078 Sorgh... 88 6e-040
gb|BF481289.1|BF481289 FM1_18_B02.g1_A003 Floral-Induced Me... 141 1e-033
gb|CW330970.1|CW330970 104_828_11480660_116_36022_078 Sorgh... 90 4e-028
gb|BF588401.1|BF588401 FM1_36_C02.g1_A003 Floral-Induced Me... 117 1e-026
gb|CB924654.1|CB924654 ABA1_1_G09.b1_A012 Abscisic acid-tre... 57 2e-026
gb|CW483251.1|CW483251 fsbb001f244m21f0 Sorghum methylation... 89 4e-026
gb|CF760278.1|CF760278 DSAF1_57_G02.b1_A011 Drought-stresse... 40 2e-022
>gb|CD205545.1|CD205545 HS1_14_B05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_14_B05_A012 5', mRNA sequence
Length = 627
Score = 484 bits (1051), Expect = e-135
Identities = 206/209 (98%), Positives = 207/209 (99%)
Frame = +1 / +1
Query: 160 ELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHVGKQFVPPMMDPVL 339
ELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPH+GKQFVPPMMDPVL
Sbjct: 1 ELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPPMMDPVL 180
Query: 340 GDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDYPEHR 519
GDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDYPEHR
Sbjct: 181 GDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDYPEHR 360
Query: 520 LKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLEILKKFQ 699
LKFFSLLRAIGTHCFQALIQLSS QLKLVIDSINWAFRHTERNIAETGLSLLLEILK FQ
Sbjct: 361 LKFFSLLRAIGTHCFQALIQLSSPQLKLVIDSINWAFRHTERNIAETGLSLLLEILKNFQ 540
Query: 700 ASGFQNQFYKTYFLTIEQEIFAVLTDTFH 786
ASGFQNQFYKTYFLTIEQEIFAVLTDTFH
Sbjct: 541 ASGFQNQFYKTYFLTIEQEIFAVLTDTFH 627
Score = 453 bits (983), Expect = e-126
Identities = 200/208 (96%), Positives = 200/208 (96%)
Frame = -2 / -2
Query: 785 WNVSVRTAKISCSIVKK*VL*NWFWNPEAWNFFKISNNRLRPVSAIFLSVCLNAQLIESI 606
WNVSVRTAKISCSIVKK*VL*N FWNPEA FFKISNNRLRPVSAIFLSVCLNAQLIESI
Sbjct: 626 WNVSVRTAKISCSIVKK*VL*N*FWNPEA*KFFKISNNRLRPVSAIFLSVCLNAQLIESI 447
Query: 605 TSFNC*LESWINAWKQWVPIARSKEKNLRRCSG*SSKFLVIISRVHWKTASNIRGTSSSI 426
TSFNC LESWINAWKQ VPIARSKEKNLRRCSG*SSKFLVIISRVHWKTASNIRGTSSSI
Sbjct: 446 TSFNCGLESWINAWKQ*VPIARSKEKNLRRCSG*SSKFLVIISRVHWKTASNIRGTSSSI 267
Query: 425 SPLYLLMIVANKDRTSDSLASGTFLA*SPRTGSIIGGTNCFPTCGKSSALSTKVSINFRV 246
SPLYLLMIVAN DRTSDSLASGTFLA*SP TGSIIGGTNCFP CGKSSALSTKVSINFRV
Sbjct: 266 SPLYLLMIVANNDRTSDSLASGTFLA*SPSTGSIIGGTNCFPICGKSSALSTKVSINFRV 87
Query: 245 SLLTDLKSFTNDVLEAKGPPSAIVLDTS 162
SLLTDLKSFTNDVLEAKGPPSAIVLDTS
Sbjct: 86 SLLTDLKSFTNDVLEAKGPPSAIVLDTS 3
Score = 434 bits (942), Expect = e-120
Identities = 180/208 (86%), Positives = 190/208 (91%)
Frame = +3 / +3
Query: 162 ACIKHDC*RRTLCLKDVICKTLEICQEGNPKVDRDFCGQGGRFATCRKAVCTTNDGSCSW 341
ACIKHDC*RRTLCLKD+ICKTLEICQEGNPKVDRDFCG G RF T RKAVC+TNDGS +W
Sbjct: 3 ACIKHDC*RRTLCLKDIICKTLEICQEGNPKVDRDFCG*GRRFTTYRKAVCSTNDGSRTW 182
Query: 342 *LC*KCTRCKGV*SSVLVCNNH*QVQRGNA*GCASYI*GCFPVHP*DDY*EL*RLS*APP 521
*LC*KCT CKGV*SSV+VCNNH*QVQRGNA*GC SYI*GCFPVH *DDY*EL*RLS*APP
Sbjct: 183 *LC*KCT*CKGV*SSVVVCNNH*QVQRGNA*GCTSYI*GCFPVHS*DDY*EL*RLS*APP 362
Query: 522 QIFFFASCNWHPLLPSINPAFKSAIEACDRFN*LGVQTYREKYCRDWP*PVVGDLEKIPG 701
QIFFFAS NW+ LLPSINPAFKSAIEA D F+*LG+QTYREKYCRDWP* +VG+ EK G
Sbjct: 363 QIFFFASRNWYSLLPSINPAFKSAIEARD*FD*LGIQTYREKYCRDWP*SIVGNFEKFSG 542
Query: 702 FRIPKPILQNLLFDN*ARDFCSPHRHIP 785
FRIPK ILQNLLF+N*ARDFCS HRHIP
Sbjct: 543 FRIPKSILQNLLFNN*ARDFCSSHRHIP 626
Score = 286 bits (620), Expect(2) = e-103
Identities = 121/135 (89%), Positives = 123/135 (91%)
Frame = -1 / -1
Query: 564 EAMGANCTKQRKKFEAVLRIIFKVLSNHLKGALENSLKYTRHILKHFPFVLVNDCCKQGQ 385
EAM NC KQRKKFEAVLRIIFKVLSNHLK ALENSLKYTR+ILKHFPFVLVNDCCKQ Q
Sbjct: 405 EAMSTNCAKQRKKFEAVLRIIFKVLSNHLKSALENSLKYTRYILKHFPFVLVNDCCKQRQ 226
Query: 384 NFRLPCIGYISSIITKNRIHHWWYKLLSYMWQIFRLVHKSLDQL*GFPLDRSQEFYK*RP 205
NFRLPCI YISSIITK IHHWW KLLSYMW IF L+HKSLDQL*GFPLDRSQEFYK* P
Sbjct: 225 NFRLPCIRYISSIITKYGIHHWWNKLLSYMW*IFCLIHKSLDQL*GFPLDRSQEFYK*CP 46
Query: 204 *GKGSSFSNRA*YKL 160
*GKGSSFSNRA*YKL
Sbjct: 45 *GKGSSFSNRA*YKL 1
Score = 210 bits (453), Expect(2) = 3e-087
Identities = 93/104 (89%), Positives = 97/104 (93%)
Frame = +2 / +2
Query: 161 SLYQARLLKEDPLPQGRHL*NS*DLSRGKP*S*SRLLWTRRKICHM*ESSLYHQ*WILFL 340
SLYQARLLKEDPLPQG HL*NS*DLSRGKP*S*SRLLW R+KI H+*ESSL+HQ*WI +L
Sbjct: 2 SLYQARLLKEDPLPQGHHL*NS*DLSRGKP*S*SRLLWIRQKIYHI*ESSLFHQ*WIPYL 181
Query: 341 VIMLEMYPMQGSLKFCPCLQQSLTSTKGKCLRMCLVYLRLFSSA 472
VIMLEMY MQGSLKFC CLQQSLTSTKGKCLRM LVYLRLFSSA
Sbjct: 182 VIMLEMYLMQGSLKFCRCLQQSLTSTKGKCLRMYLVYLRLFSSA 313
Score = 207 bits (447), Expect(2) = 5e-087
Identities = 96/120 (80%), Positives = 100/120 (83%)
Frame = -3 / -3
Query: 784 GMCL*GLQKSLAQLSKSRFCRIGFGILKPGIFSRSPTTG*GQSLQYFSLYV*TPN*LNRS 605
GMCL* LQKSLAQL KS+FCRI FGILKP FS+ PT *GQSLQYFSLYV* PN* N+S
Sbjct: 625 GMCL*ELQKSLAQLLKSKFCRIDFGILKPENFSKFPTID*GQSLQYFSLYV*MPN*SNQS 446
Query: 604 QASIADLKAGLMLGSNGCQLHEAKKKI*GGAQDNLQXXXXXSQGCTGKQPQIYEAHPQAF 425
+ASIADLKAGLMLGSN QL EAKKKI*GGAQDNLQ SQ CTGKQPQIYE HPQAF
Sbjct: 445 RASIADLKAGLMLGSNEYQLREAKKKI*GGAQDNLQSS**SSQECTGKQPQIYEVHPQAF 266
Score = 136 bits (292), Expect(2) = 5e-087
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = -3 / -3
Query: 367 HRVHF*HNHQEQDPSLVVQTAFLHVANLPPCPQKSRSTLGFPS*QISRVLQMTSLRQRVL 188
H+VHF*HNHQ +DPSLV QTAFL+V NL P PQKSRSTLGFPS*QISRVLQM SLRQRVL
Sbjct: 208 HQVHF*HNHQVRDPSLVEQTAFLYVVNLLPYPQKSRSTLGFPS*QISRVLQMMSLRQRVL 29
Query: 187 LQQSCLIQA 161
LQQSCLIQA
Sbjct: 28 LQQSCLIQA 2
Score = 134 bits (288), Expect(2) = 3e-087
Identities = 65/91 (71%), Positives = 67/91 (73%)
Frame = +2 / +2
Query: 512 STASNFFLCFVQLAPIASKH*XXXXXXXXXXXXIQLIGRSDIQREILQRLALACCWRS*K 691
STASNFFLCF QL IASKH* I+LIG SDIQREILQRLAL CW+ *K
Sbjct: 353 STASNFFLCFAQLVLIASKH*SSFQVRN*SS*LIRLIGHSDIQREILQRLALVYCWKF*K 532
Query: 692 NSRLQDSKTNSTKPTF*QLSKRFLQSSQTHS 784
RLQDSK NSTK TF*QLSKRFLQ SQTHS
Sbjct: 533 IFRLQDSKINSTKLTF*QLSKRFLQFSQTHS 625
Score = 112 bits (240), Expect(2) = e-103
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = -1 / -1
Query: 786 MECVCEDCKNLLLNCQKVGFVELVLES*SLEFFQDLQQQAKASLCNISLCMSERPIN*ID 607
+ECVCE+CKNLLLNC KV FVEL+LES*SL+ FQ+ QQ KASLCNISLCMSE PIN I+
Sbjct: 627 VECVCENCKNLLLNC*KVSFVELILES*SLKIFQNFQQ*TKASLCNISLCMSECPINRIN 448
Query: 606 HK 601
H+
Sbjct: 447 HE 442
>gb|BI074580.1|BI074580 IP1_13_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 403 bits (875), Expect = e-111
Identities = 172/175 (98%), Positives = 173/175 (98%)
Frame = +1 / +1
Query: 148 RMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHVGKQFVPPMM 327
R YSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPH+GKQFVPPMM
Sbjct: 4 RGYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPPMM 183
Query: 328 DPVLGDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDY 507
DPVLGDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDY
Sbjct: 184 DPVLGDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDY 363
Query: 508 PEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSL 672
PEHRLKFFSLLRAIGTHCFQALIQLSS QLKLVIDSINWAFRHTERNIAETGLSL
Sbjct: 364 PEHRLKFFSLLRAIGTHCFQALIQLSSPQLKLVIDSINWAFRHTERNIAETGLSL 528
Score = 381 bits (827), Expect = e-104
Identities = 168/173 (97%), Positives = 168/173 (97%)
Frame = -2 / -2
Query: 671 RLRPVSAIFLSVCLNAQLIESITSFNC*LESWINAWKQWVPIARSKEKNLRRCSG*SSKF 492
RLRPVSAIFLSVCLNAQLIESITSFNC LESWINAWKQ VPIARSKEKNLRRCSG*SSKF
Sbjct: 527 RLRPVSAIFLSVCLNAQLIESITSFNCGLESWINAWKQ*VPIARSKEKNLRRCSG*SSKF 348
Query: 491 LVIISRVHWKTASNIRGTSSSISPLYLLMIVANKDRTSDSLASGTFLA*SPRTGSIIGGT 312
LVIISRVHWKTASNIRGTSSSISPLYLLMIVAN DRTSDSLASGTFLA*SP TGSIIGGT
Sbjct: 347 LVIISRVHWKTASNIRGTSSSISPLYLLMIVANNDRTSDSLASGTFLA*SPSTGSIIGGT 168
Query: 311 NCFPTCGKSSALSTKVSINFRVSLLTDLKSFTNDVLEAKGPPSAIVLDTSSLY 153
NCFP CGKSSALSTKVSINFRVSLLTDLKSFTNDVLEAKGPPSAIVLDTSSLY
Sbjct: 167 NCFPICGKSSALSTKVSINFRVSLLTDLKSFTNDVLEAKGPPSAIVLDTSSLY 9
Score = 367 bits (796), Expect = e-100
Identities = 153/172 (88%), Positives = 160/172 (93%)
Frame = +3 / +3
Query: 153 VQRACIKHDC*RRTLCLKDVICKTLEICQEGNPKVDRDFCGQGGRFATCRKAVCTTNDGS 332
VQRACIKHDC*RRTLCLKD+ICKTLEICQEGNPKVDRDFCG G RF T RKAVC+TNDGS
Sbjct: 9 VQRACIKHDC*RRTLCLKDIICKTLEICQEGNPKVDRDFCG*GRRFTTYRKAVCSTNDGS 188
Query: 333 CSW*LC*KCTRCKGV*SSVLVCNNH*QVQRGNA*GCASYI*GCFPVHP*DDY*EL*RLS* 512
+W*LC*KCT CKGV*SSV+VCNNH*QVQRGNA*GC SYI*GCFPVH *DDY*EL*RLS*
Sbjct: 189 RTW*LC*KCT*CKGV*SSVVVCNNH*QVQRGNA*GCTSYI*GCFPVHS*DDY*EL*RLS* 368
Query: 513 APPQIFFFASCNWHPLLPSINPAFKSAIEACDRFN*LGVQTYREKYCRDWP* 668
APPQIFFFAS NW+ LLPSINPAFKSAIEA D F+*LG+QTYREKYCRDWP*
Sbjct: 369 APPQIFFFASRNWYSLLPSINPAFKSAIEARD*FD*LGIQTYREKYCRDWP* 524
Score = 291 bits (630), Expect(2) = 2e-084
Identities = 124/139 (89%), Positives = 126/139 (90%)
Frame = -1 / -1
Query: 564 EAMGANCTKQRKKFEAVLRIIFKVLSNHLKGALENSLKYTRHILKHFPFVLVNDCCKQGQ 385
EAM NC KQRKKFEAVLRIIFKVLSNHLK ALENSLKYTR+ILKHFPFVLVNDCCKQ Q
Sbjct: 420 EAMSTNCAKQRKKFEAVLRIIFKVLSNHLKSALENSLKYTRYILKHFPFVLVNDCCKQRQ 241
Query: 384 NFRLPCIGYISSIITKNRIHHWWYKLLSYMWQIFRLVHKSLDQL*GFPLDRSQEFYK*RP 205
NFRLPCI YISSIITK IHHWW KLLSYMW IF L+HKSLDQL*GFPLDRSQEFYK* P
Sbjct: 240 NFRLPCIRYISSIITKYGIHHWWNKLLSYMW*IFCLIHKSLDQL*GFPLDRSQEFYK*CP 61
Query: 204 *GKGSSFSNRA*YKLAVHS 148
*GKGSSFSNRA*YKLAV S
Sbjct: 60 *GKGSSFSNRA*YKLAVPS 4
Score = 215 bits (464), Expect(2) = 7e-070
Identities = 96/108 (88%), Positives = 100/108 (92%)
Frame = +2 / +2
Query: 149 ECTASLYQARLLKEDPLPQGRHL*NS*DLSRGKP*S*SRLLWTRRKICHM*ESSLYHQ*W 328
E TASLYQARLLKEDPLPQG HL*NS*DLSRGKP*S*SRLLW R+KI H+*ESSL+HQ*W
Sbjct: 5 EGTASLYQARLLKEDPLPQGHHL*NS*DLSRGKP*S*SRLLWIRQKIYHI*ESSLFHQ*W 184
Query: 329 ILFLVIMLEMYPMQGSLKFCPCLQQSLTSTKGKCLRMCLVYLRLFSSA 472
I +LVIMLEMY MQGSLKFC CLQQSLTSTKGKCLRM LVYLRLFSSA
Sbjct: 185 IPYLVIMLEMYLMQGSLKFCRCLQQSLTSTKGKCLRMYLVYLRLFSSA 328
Score = 145 bits (311), Expect(2) = 8e-071
Identities = 63/72 (87%), Positives = 66/72 (91%)
Frame = -3 / -3
Query: 367 HRVHF*HNHQEQDPSLVVQTAFLHVANLPPCPQKSRSTLGFPS*QISRVLQMTSLRQRVL 188
H+VHF*HNHQ +DPSLV QTAFL+V NL P PQKSRSTLGFPS*QISRVLQM SLRQRVL
Sbjct: 223 HQVHF*HNHQVRDPSLVEQTAFLYVVNLLPYPQKSRSTLGFPS*QISRVLQMMSLRQRVL 44
Query: 187 LQQSCLIQARCT 152
LQQSCLIQARCT
Sbjct: 43 LQQSCLIQARCT 8
Score = 144 bits (310), Expect(2) = 8e-071
Identities = 67/81 (82%), Positives = 69/81 (85%)
Frame = -3 / -3
Query: 667 *GQSLQYFSLYV*TPN*LNRSQASIADLKAGLMLGSNGCQLHEAKKKI*GGAQDNLQXXX 488
*GQSLQYFSLYV* PN* N+S+ASIADLKAGLMLGSN QL EAKKKI*GGAQDNLQ
Sbjct: 523 *GQSLQYFSLYV*MPN*SNQSRASIADLKAGLMLGSNEYQLREAKKKI*GGAQDNLQSS* 344
Query: 487 XXSQGCTGKQPQIYEAHPQAF 425
SQ CTGKQPQIYE HPQAF
Sbjct: 343 *SSQECTGKQPQIYEVHPQAF 281
Score = 71.6 bits (150), Expect(2) = 7e-070
Identities = 35/52 (67%), Positives = 36/52 (69%)
Frame = +2 / +2
Query: 512 STASNFFLCFVQLAPIASKH*XXXXXXXXXXXXIQLIGRSDIQREILQRLAL 667
STASNFFLCF QL IASKH* I+LIG SDIQREILQRLAL
Sbjct: 368 STASNFFLCFAQLVLIASKH*SSFQVRN*SS*LIRLIGHSDIQREILQRLAL 523
Score = 44.6 bits (91), Expect(2) = 2e-084
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1 / -1
Query: 666 KASLCNISLCMSERPIN*IDHK 601
KASLCNISLCMSE PIN I+H+
Sbjct: 522 KASLCNISLCMSECPINRINHE 457
>gb|CB924760.1|CB924760 ABA1_1_G09.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_1_G09_A012 5', mRNA sequence
Length = 638
Score = 316 bits (684), Expect(3) = 3e-096
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -3 / -1
Query: 1207 TRNTTNLPSRLAIR*GQSAPEWQAFVGAPFLFGQQPLPRIDPCYPELRTPSTAPGNL*YG 1028
TRNT NLPSRLAIR*GQ A EWQAFVGAPFLFGQQPLPRIDPCYPELRTPSTAPG+L*YG
Sbjct: 488 TRNTMNLPSRLAIR*GQ*ALEWQAFVGAPFLFGQQPLPRIDPCYPELRTPSTAPGSL*YG 309
Query: 1027 F*SSEDQVLN*EGHPQTWSPQLQSC*EMMFLRVLWCNLEQTWHYPYIDMVQKTRPIEAPL 848
F*+ ED VLN*EGH QTWSP+L SC* MMFLRVLWCNLEQTWH YIDMV K PIEAPL
Sbjct: 308 F*NLEDHVLN*EGHLQTWSPRLLSC*GMMFLRVLWCNLEQTWHCLYIDMVLKKHPIEAPL 129
Query: 847 DHQPHKTSVVAPKHEA*NQVYGMCL*GLQKSLAQLSKSRF 728
DHQPHK SV APKH A*NQV GMCL* LQKSLAQL K F
Sbjct: 128 DHQPHKISVAAPKHGA*NQVCGMCL*ELQKSLAQL*KVSF 9
Score = 314 bits (681), Expect(3) = 8e-097
Identities = 135/157 (85%), Positives = 135/157 (85%)
Frame = +1 / +2
Query: 727 KTYFLTIEQEIFAVLTDTFHKPGFKLHVSVLQHLFCAVDGLTEPLWDASSVPYQYTDNAM 906
K TIEQEIFAVLTDTFHKPGFKLHV VLQHLFC VDGLTEPLWDASSVPYQYTDNAM
Sbjct: 8 KNLLFTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPLWDASSVPYQYTDNAM 187
Query: 907 FVRDYTIKLLGTSFPNMTVAEVTKFVDGLLSSKLDLPSFKNHIRDFLVQSKEFSAQDNKD 1086
FVRDYTIKLLGTSFPNMTV EVTKFVDGLLSSK DLPSFKNHIRDFLVQSKEFSAQDNKD
Sbjct: 188 FVRDYTIKLLGTSFPNMTVTEVTKFVDGLLSSKHDLPSFKNHIRDFLVQSKEFSAQDNKD 367
Query: 1087 LYXXXXXXXXXXXXXXMLAIPGLIAPSELQDEMVDS* 1197
LY MLAIPGLIAPSELQDEMVDS*
Sbjct: 368 LYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS* 478
Score = 292 bits (633), Expect(3) = 2e-085
Identities = 133/160 (83%), Positives = 137/160 (85%)
Frame = +2 / +3
Query: 728 KPTF*QLSKRFLQSSQTHSINLVSSFMFRCYNTCFVRLMV*RSLYGTRLLYHINIRIMPC 907
K F QLSKRFLQ SQTHS NLVSS MF C NT FV LMV*RSLYG L YHINI+ MPC
Sbjct: 9 KTYFLQLSKRFLQFSQTHSTNLVSSSMFWCCNTYFVWLMV*RSLYGMLLQYHINIQTMPC 188
Query: 908 LFEITP*NS*EHHFLT*L*LR*PSLWMAFLVQNLIFRASKTILEISWCSRRSSQLRITRI 1087
LFEITP*NS*EHH LT* * R*PSL MAFLVQN+IF+ SKTILE SWCSRRSSQLRITRI
Sbjct: 189 LFEITP*NS*EHHSLT*Q*PR*PSL*MAFLVQNMIFQVSKTILETSWCSRRSSQLRITRI 368
Query: 1088 YTRKRLLPKEKGSANECLPFRG*LPLANCKTRW*IRSVPC 1207
YTRKRLLPKEKGSANECLPF+G LPLANCKTRW*I SV C
Sbjct: 369 YTRKRLLPKEKGSANECLPFQGSLPLANCKTRW*IHSVSC 488
Score = 286 bits (620), Expect(3) = 4e-079
Identities = 120/154 (77%), Positives = 123/154 (79%)
Frame = +3 / +1
Query: 732 LLFDN*ARDFCSPHRHIP*TWFQASCFGATTLVLCG*WSNGASMGRVFCTISIYG*CHVC 911
L F N*ARDFCS HRHIP TWFQA CFGA TL+LCG*WSNGASMG F TISIY CHVC
Sbjct: 13 LTFYN*ARDFCSSHRHIPQTWFQAPCFGAATLILCG*WSNGASMGCFFSTISIYRQCHVC 192
Query: 912 SRLHHKTLRNIIS*HDCS*GDQVCGWPS*FKT*SSELQKPY*RFPGAVEGVLXXXXXXXX 1091
SRLHHKTLRNII *HD + GDQVC WPS*FKT*SS+ QKPY*R PGAVEGVL
Sbjct: 193 SRLHHKTLRNIIP*HDSNRGDQVCRWPS*FKT*SSKFQKPY*RLPGAVEGVLSSG*QGSI 372
Query: 1092 XXXXCCPKRKGAPTNACHSGADCP*RIARRDGRF 1193
CCPKRKGAPTNACHS A CP*RIARRDGRF
Sbjct: 373 RGRGCCPKRKGAPTNACHSRAHCP*RIARRDGRF 474
Score = 245 bits (530), Expect(4) = 6e-093
Identities = 104/110 (94%), Positives = 106/110 (96%)
Frame = -2 / -3
Query: 1067 ENSFDCTRKSLIWFLKLGRSSFELRRPSTNLVTSATVMLGNDVPKSFMV*SRTNMALSVY 888
ENSFDCTRKSLIWFLKLGRS FELRRPSTNLVTS TVMLGNDVPKSFMV*SRTNMALSVY
Sbjct: 348 ENSFDCTRKSLIWFLKLGRSCFELRRPSTNLVTSVTVMLGNDVPKSFMV*SRTNMALSVY 169
Query: 887 *YGTEDASHRGSVRPSTAQNKCCSTET*SLKPGLWNVSVRTAKISCSIVK 738
*YGTE+ASHRGSVRPST QNKCCST+T SLKPGLWNVSVRTAKISCSIVK
Sbjct: 168 *YGTEEASHRGSVRPSTTQNKCCSTKTWSLKPGLWNVSVRTAKISCSIVK 19
Score = 116 bits (249), Expect(5) = 9e-063
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = -1 / -2
Query: 1050 HQEISNMVFEARKIKF*TKKAIHKLGHLSYSHVRK*CS*EFYGVISNKHGIIRILIWY 877
HQE+SNMVFE KI F*TKKAI+KLGHL Y HVR+*CS*EFYGVISNKHGI+ ILIWY
Sbjct: 331 HQEVSNMVFETWKIMF*TKKAIYKLGHLGYCHVRE*CS*EFYGVISNKHGIVCILIWY 158
Score = 79.0 bits (166), Expect(4) = 6e-093
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / -2
Query: 1212 SKQGTLRIYHLVLQFARGNQPRNGKHSLALPFSLGSSLF 1096
++Q TL IYHLVLQFARGN+P NGKHSLALPFSLGSSLF
Sbjct: 493 NRQETL*IYHLVLQFARGNEPWNGKHSLALPFSLGSSLF 377
Score = 75.3 bits (158), Expect(5) = 9e-063
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -1 / -2
Query: 846 TINRTKQVL*HRNMKLETRFMECVCEDCKNLLLNCQK 736
TIN TK VL H+NM+LETRF+ECVCE+CKNLLLNC+K
Sbjct: 127 TINHTK*VLQHQNMELETRFVECVCENCKNLLLNCKK 17
Score = 56.1 bits (116), Expect(5) = 9e-063
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = -2 / -3
Query: 1208 NKEHYESTISSCNSLGAISPGMASI 1134
+K+HYESTISSCNSLGA+SPGMASI
Sbjct: 489 DKKHYESTISSCNSLGAMSPGMASI 415
Score = 42.3 bits (86), Expect(3) = 8e-097
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 1211 DSAFSNVASCLLVWPREPS 1267
DSAF+NVASCLLVWPR S
Sbjct: 490 DSAFANVASCLLVWPRNAS 546
Score = 41.4 bits (84), Expect(3) = 3e-096
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 1266 EGSRGQTNKQEATLEKAESKQGTLRI 1189
E RGQTNKQEATL KAES + T+ +
Sbjct: 545 EAFRGQTNKQEATLAKAESTRNTMNL 468
Score = 40.9 bits (83), Expect(4) = 6e-093
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 1267 RGLPRPDQQTGSYIRESRIKTRN 1199
RG+PRPDQQTGSYI ES I ++
Sbjct: 546 RGIPRPDQQTGSYISES*IDKKH 478
Score = 39.1 bits (79), Expect(3) = 8e-097
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 1295 VVKGGCCNFIFGYLHM 1342
V +G CCNFIFGYLHM
Sbjct: 589 VKEGACCNFIFGYLHM 636
Score = 38.6 bits (78), Expect(3) = 2e-085
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 1294 GGERWLL*FYFWLPPHD 1344
G R LL*FYFWLPPHD
Sbjct: 588 GERRCLL*FYFWLPPHD 638
Score = 36.8 bits (74), Expect(3) = 3e-096
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 1343 SCGGNQK*NYSSHLSPP 1293
SCGGNQK*NYS HL P
Sbjct: 637 SCGGNQK*NYSRHLLSP 587
Score = 36.3 bits (73), Expect(5) = 9e-063
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2 / -2
Query: 1265 RAPEARPTNRKLH*RKQNQNK 1203
R EARPTNRKLH*RK N+ +
Sbjct: 544 RHSEARPTNRKLH*RKLNRQE 482
Score = 36.3 bits (73), Expect(4) = 6e-093
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 1342 HVEVTKNKITAATFHH 1295
HVEVTKNKITA TF H
Sbjct: 636 HVEVTKNKITAGTFFH 589
Score = 33.6 bits (67), Expect(5) = 9e-063
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 1344 IMWR*PKIKLQQPPFTT 1294
+MWR*PKIKLQQ P T
Sbjct: 638 VMWR*PKIKLQQAPSFT 588
Score = 27.2 bits (53), Expect(3) = 4e-079
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 1302 KVAAVILFLVTST* 1343
KV AVILFLVTST*
Sbjct: 596 KVPAVILFLVTST* 637
Score = 26.7 bits (52), Expect(3) = 2e-085
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / +2
Query: 1242 CWSGLGSPRLSSASFLPGW 1298
CWSGLG P S S P +
Sbjct: 521 CWSGLGMPLEPSTSKCPSF 577
Score = 23.1 bits (44), Expect(3) = 4e-079
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 1280 EFSSRVVKGGCC 1315
EFS RVVK G C
Sbjct: 571 EFSYRVVKEGAC 606
>gb|CD229690.1|CD229690 CCC1_18_A04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_18_A04_A007 5', mRNA sequence
Length = 343
Score = 264 bits (572), Expect = 2e-069
Identities = 109/112 (97%), Positives = 109/112 (97%)
Frame = +1 / +3
Query: 592 QLKLVIDSINWAFRHTERNIAETGLSLLLEILKKFQASGFQNQFYKTYFLTIEQEIFAVL 771
QLKLVIDSINWAFRHTERNIAETGLSLLLEILK FQASGFQNQFYKTYFLTIEQEIFAVL
Sbjct: 6 QLKLVIDSINWAFRHTERNIAETGLSLLLEILKNFQASGFQNQFYKTYFLTIEQEIFAVL 185
Query: 772 TDTFHKPGFKLHVSVLQHLFCAVDGLTEPLWDASSVPYQYTDNAMFVRDYTI 927
TDTFHKPGFKLHV VLQHLFC VDGLTEPLWDASSVPYQYTDNAMFVRDYTI
Sbjct: 186 TDTFHKPGFKLHVLVLQHLFCVVDGLTEPLWDASSVPYQYTDNAMFVRDYTI 341
Score = 243 bits (526), Expect = 4e-063
Identities = 106/113 (93%), Positives = 108/113 (95%)
Frame = -2 / -1
Query: 929 FMV*SRTNMALSVY*YGTEDASHRGSVRPSTAQNKCCSTET*SLKPGLWNVSVRTAKISC 750
FMV*SRTNMALSVY*YGTE+ASHRGSVRPST QNKCCST+T SLKPGLWNVSVRTAKISC
Sbjct: 343 FMV*SRTNMALSVY*YGTEEASHRGSVRPSTTQNKCCSTKTWSLKPGLWNVSVRTAKISC 164
Query: 749 SIVKK*VL*NWFWNPEAWNFFKISNNRLRPVSAIFLSVCLNAQLIESITSFNC 591
SIVKK*VL*N FWNPEA FFKISNNRLRPVSAIFLSVCLNAQLIESITSFNC
Sbjct: 163 SIVKK*VL*N*FWNPEA*KFFKISNNRLRPVSAIFLSVCLNAQLIESITSFNC 5
Score = 223 bits (481), Expect = 7e-057
Identities = 90/114 (78%), Positives = 97/114 (85%)
Frame = +3 / +2
Query: 588 SAIEACDRFN*LGVQTYREKYCRDWP*PVVGDLEKIPGFRIPKPILQNLLFDN*ARDFCS 767
SAIEA D F+*LG+QTYREKYCRDWP* +VG+ E+ GFRIPK ILQNLLF+N*ARDFCS
Sbjct: 2 SAIEARD*FD*LGIQTYREKYCRDWP*SIVGNFEEFSGFRIPKSILQNLLFNN*ARDFCS 181
Query: 768 PHRHIP*TWFQASCFGATTLVLCG*WSNGASMGRVFCTISIYG*CHVCSRLHHK 929
HRHIP TW QA CFGA TL+LCG*WSNGASMG F TISIY CHVCSRLHHK
Sbjct: 182 SHRHIPQTWLQAPCFGAATLILCG*WSNGASMGCFFSTISIYRQCHVCSRLHHK 343
Score = 202 bits (435), Expect = 1e-050
Identities = 89/114 (78%), Positives = 94/114 (82%)
Frame = -3 / -2
Query: 928 LWCNLEQTWHYPYIDMVQKTRPIEAPLDHQPHKTSVVAPKHEA*NQVYGMCL*GLQKSLA 749
LWCNLEQTWH YIDMV K PIEAPLDHQPHK SV APKH A*+QV GMCL* LQKSLA
Sbjct: 342 LWCNLEQTWHCLYIDMVLKKHPIEAPLDHQPHKISVAAPKHGA*SQVCGMCL*ELQKSLA 163
Query: 748 QLSKSRFCRIGFGILKPGIFSRSPTTG*GQSLQYFSLYV*TPN*LNRSQASIAD 587
QL KS+FCRI FGILKP S+ PT *GQSLQYFSLYV* PN* N+S+ASIAD
Sbjct: 162 QLLKSKFCRIDFGILKPENSSKFPTID*GQSLQYFSLYV*MPN*SNQSRASIAD 1
Score = 177 bits (380), Expect = 6e-043
Identities = 82/106 (77%), Positives = 86/106 (81%)
Frame = +2 / +1
Query: 611 IQLIGRSDIQREILQRLALACCWRS*KNSRLQDSKTNSTKPTF*QLSKRFLQSSQTHSIN 790
I+LIG SDIQREILQRLAL CW+ *+ RLQDSK NSTK TF*QLSKRFLQ SQTHS N
Sbjct: 25 IRLIGHSDIQREILQRLALVYCWKF*RIFRLQDSKINSTKLTF*QLSKRFLQFSQTHSTN 204
Query: 791 LVSSFMFRCYNTCFVRLMV*RSLYGTRLLYHINIRIMPCLFEITP* 928
L SS MF C NT FV LMV*RSLYG L YHINI+ MPCLFEITP*
Sbjct: 205 LASSSMFWCCNTYFVWLMV*RSLYGMLLQYHINIQTMPCLFEITP* 342
Score = 140 bits (300), Expect(2) = 2e-038
Identities = 60/82 (73%), Positives = 69/82 (84%)
Frame = -1 / -3
Query: 846 TINRTKQVL*HRNMKLETRFMECVCEDCKNLLLNCQKVGFVELVLES*SLEFFQDLQQQA 667
TIN TK VL H+NM+LE RF+ECVCE+CKNLLLNC KV FVEL+LES*SL+ Q+ QQ
Sbjct: 260 TINHTK*VLQHQNMELEARFVECVCENCKNLLLNC*KVSFVELILES*SLKILQNFQQ*T 81
Query: 666 KASLCNISLCMSERPIN*IDHK 601
KASLCNISLCMSE PIN I+H+
Sbjct: 80 KASLCNISLCMSECPINRINHE 15
Score = 41.4 bits (84), Expect(2) = 2e-038
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1 / -3
Query: 927 YGVISNKHGIIRILIWY 877
YGVISNKHGI+ ILIWY
Sbjct: 341 YGVISNKHGIVCILIWY 291
>gb|CF761156.1|CF761156 DSAF1_71_H03.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_71_H03_A011 5', mRNA sequence
Length = 525
Score = 92.7 bits (196), Expect(9) = 2e-058
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +2 / +3
Query: 1085 IYTRKRLLPKEKGSANECLPFRG*LPLANCKTRW*IRSVPC 1207
IYTRKRLLPKEKGSANECLPF+G LPLANCKTRW*I SV C
Sbjct: 3 IYTRKRLLPKEKGSANECLPFQGSLPLANCKTRW*IHSVSC 125
Score = 89.5 bits (189), Expect(8) = 6e-056
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = -3 / -2
Query: 1207 TRNTTNLPSRLAIR*GQSAPEWQAFVGAPFLFGQQPLPRID 1085
TRNT NLPSRLAIR*GQ A EWQAFVGAPFLFGQQPLPRID
Sbjct: 125 TRNTMNLPSRLAIR*GQ*ALEWQAFVGAPFLFGQQPLPRID 3
Score = 79.0 bits (166), Expect(6) = 7e-048
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / -3
Query: 1212 SKQGTLRIYHLVLQFARGNQPRNGKHSLALPFSLGSSLF 1096
++Q TL IYHLVLQFARGN+P NGKHSLALPFSLGSSLF
Sbjct: 130 NRQETL*IYHLVLQFARGNEPWNGKHSLALPFSLGSSLF 14
Score = 74.8 bits (157), Expect(7) = 2e-041
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 1104 CCPKRKGAPTNACHSGADCP*RIARRDGRF 1193
CCPKRKGAPTNACHS A CP*RIARRDGRF
Sbjct: 22 CCPKRKGAPTNACHSRAHCP*RIARRDGRF 111
Score = 62.5 bits (130), Expect(9) = 2e-058
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 1294 GGERWLL*FYFWLPPHDADSKICGCRLG 1377
G R LL*FYFWLPPHDADSKICG RLG
Sbjct: 225 GERRCLL*FYFWLPPHDADSKICGSRLG 308
Score = 61.1 bits (127), Expect(6) = 7e-048
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2 / -3
Query: 1415 SRNLPCGKTD*SIPSLQPQILESASCGGNQK*NYSSHLSPP 1293
S+ P K PSL PQILESASCGGNQK*NYS HL P
Sbjct: 346 SQTPPAAKLTSPFPSLLPQILESASCGGNQK*NYSRHLLSP 224
Score = 58.8 bits (122), Expect(7) = 2e-041
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / +1
Query: 1295 VVKGGCCNFIFGYLHMMLIPRFVVVD 1372
V +G CCNFIFGYLHM LIPRFVVVD
Sbjct: 226 VKEGACCNFIFGYLHMTLIPRFVVVD 303
Score = 58.3 bits (121), Expect(8) = 6e-056
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / -1
Query: 1372 VYNHKSWNQHHVEVTKNKITAATFHH 1295
VY HKSWNQ HVEVTKNKITA TF H
Sbjct: 303 VYYHKSWNQRHVEVTKNKITAGTFFH 226
Score = 56.1 bits (116), Expect(7) = 9e-037
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = -2 / -1
Query: 1208 NKEHYESTISSCNSLGAISPGMASI 1134
+K+HYESTISSCNSLGA+SPGMASI
Sbjct: 126 DKKHYESTISSCNSLGAMSPGMASI 52
Score = 53.8 bits (111), Expect(7) = 9e-037
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -1 / -2
Query: 1374 QSTTTNLGISIMWR*PKIKLQQPPFTT 1294
+STTTNLGIS+MWR*PKIKLQQ P T
Sbjct: 305 KSTTTNLGISVMWR*PKIKLQQAPSFT 225
Score = 51.0 bits (105), Expect(4) = 1e-021
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +1 / +2
Query: 1084 DLYXXXXXXXXXXXXXXMLAIPGLIAPSELQDEMVDS* 1197
DLY MLAIPGLIAPSELQDEMVDS*
Sbjct: 2 DLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS* 115
Score = 44.6 bits (91), Expect(4) = 1e-021
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = +3 / +2
Query: 1302 KVAAVILFLVTST*C*FQDLWL*TGNGLVSFAAGEVPGTAVGSSA 1436
KV AVILFLVTST* *FQDLW *T F G +G S+
Sbjct: 233 KVPAVILFLVTST*R*FQDLW**TWERTSQFCRRRCLGLLLGLSS 367
Score = 42.3 bits (86), Expect(9) = 2e-058
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 1211 DSAFSNVASCLLVWPREPS 1267
DSAF+NVASCLLVWPR S
Sbjct: 127 DSAFANVASCLLVWPRNAS 183
Score = 41.4 bits (84), Expect(8) = 6e-056
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / -2
Query: 1266 EGSRGQTNKQEATLEKAESKQGTLRI 1189
E RGQTNKQEATL KAES + T+ +
Sbjct: 182 EAFRGQTNKQEATLAKAESTRNTMNL 105
Score = 40.9 bits (83), Expect(6) = 7e-048
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3 / -1
Query: 1267 RGLPRPDQQTGSYIRESRIKTRN 1199
RG+PRPDQQTGSYI ES I ++
Sbjct: 183 RGIPRPDQQTGSYISES*IDKKH 115
Score = 40.5 bits (82), Expect(8) = 6e-056
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / -1
Query: 1553 SIYELQLKKHTMLYHD 1506
SIY+LQLKKHTMLYHD
Sbjct: 498 SIYKLQLKKHTMLYHD 451
Score = 38.6 bits (78), Expect(7) = 9e-037
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3 / -2
Query: 1561 SLDPSMSFN*RSIQCCTTMIY 1499
+L PS++FN*RSIQCCTT+ +
Sbjct: 506 NLHPSINFN*RSIQCCTTIYH 444
Score = 36.8 bits (74), Expect(7) = 2e-041
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 1507 SWYSIVCFFS*SS*MD 1554
SWYSIVCFFS*S *MD
Sbjct: 452 SWYSIVCFFS*SL*MD 499
Score = 36.3 bits (73), Expect(7) = 9e-037
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2 / -3
Query: 1265 RAPEARPTNRKLH*RKQNQNK 1203
R EARPTNRKLH*RK N+ +
Sbjct: 181 RHSEARPTNRKLH*RKLNRQE 119
Score = 35.9 bits (72), Expect(9) = 2e-058
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 1506 IVVQHCMLLQLKLIDGSRLI 1565
IVVQHCMLL LK IDG R +
Sbjct: 451 IVVQHCMLL*LKFIDGWRFL 510
Score = 35.4 bits (71), Expect(8) = 6e-056
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 1516 CTTMIYHGQSTRTNV 1472
C T IYHGQSTRTNV
Sbjct: 464 CCTTIYHGQSTRTNV 420
Score = 34.5 bits (69), Expect(4) = 1e-021
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 1505 HRGTALYASSVEAHRWIQ 1558
+RGTALYAS VE +RW++
Sbjct: 450 YRGTALYASLVEVYRWME 503
Score = 34.5 bits (69), Expect(6) = 7e-048
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 1469 EPLLTHPGKHSC*RP 1425
EPLLTHP KHSC* P
Sbjct: 398 EPLLTHPVKHSC*DP 354
Score = 34.5 bits (69), Expect(6) = 7e-048
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 1529 KHTMLYHDDIPWAKHTHQC*EPLLT 1455
K + + DI WAKHTHQC* L+
Sbjct: 477 KKHTMLYHDISWAKHTHQC*PNTLS 403
Score = 34.5 bits (69), Expect(6) = 7e-048
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1 / -3
Query: 1554 IHL*ASTEEAYNAVPR 1507
IHL* ST+EAYNAVPR
Sbjct: 499 IHL*TSTKEAYNAVPR 452
Score = 34.1 bits (68), Expect(9) = 2e-058
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 1471 *HWCVCFAHGISSWYSIVCF 1530
*HWCVCFAH IS + + F
Sbjct: 419 *HWCVCFAHDISWYSIVCFF 478
Score = 33.1 bits (66), Expect(8) = 6e-056
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 1480 TNVKSRC*HIQASTAAE 1430
T KSRC*HIQ+STAAE
Sbjct: 409 TEHKSRC*HIQSSTAAE 359
Score = 31.8 bits (63), Expect(9) = 2e-058
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3 / +3
Query: 1431 SAAVLAWMC*QRLLTLV 1481
SAAVL WMC*QRLL V
Sbjct: 360 SAAVLDWMC*QRLLCSV 410
Score = 30.4 bits (60), Expect(7) = 2e-041
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 1470 LTLVRVLCPWYIIV 1511
LTLVRVLCP YI+V
Sbjct: 418 LTLVRVLCP*YIVV 459
Score = 29.9 bits (59), Expect(4) = 1e-021
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 1472 NIGACALPMVY 1504
NIGACALPM+Y
Sbjct: 420 NIGACALPMIY 452
Score = 29.9 bits (59), Expect(8) = 6e-056
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 1444 STAAEDPTAVPGTSPAAKLTSPFP 1373
S+ A + T PAAKLTSPFP
Sbjct: 376 SSTAAETQQQSQTPPAAKLTSPFP 305
Score = 27.6 bits (54), Expect(7) = 9e-037
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 1503 YTMGKAHAPML 1471
Y MGKAHAPML
Sbjct: 451 YIMGKAHAPML 419
Score = 26.7 bits (52), Expect(7) = 2e-041
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1374 GNGLVSFAAGEV 1409
GNGLVSFAAG V
Sbjct: 306 GNGLVSFAAGGV 341
Score = 26.7 bits (52), Expect(9) = 2e-058
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 1373 WEWTSQFCRR 1402
WE TSQFCRR
Sbjct: 305 WERTSQFCRR 334
Score = 26.7 bits (52), Expect(7) = 2e-041
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / +2
Query: 1242 CWSGLGSPRLSSASFLPGW 1298
CWSGLG P S S P +
Sbjct: 158 CWSGLGMPLEPSTSKCPSF 214
Score = 26.3 bits (51), Expect(7) = 9e-037
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 1470 RAAVNTSRQAQLLK 1429
RAA NTS QAQLL+
Sbjct: 399 RAAANTSSQAQLLR 358
Score = 24.4 bits (47), Expect(7) = 2e-041
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 1433 SSCACLDVLTAAL 1471
SSCA LDVL AAL
Sbjct: 362 SSCA*LDVLAAAL 400
Score = 24.0 bits (46), Expect(7) = 9e-037
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 1400 CGKTD*SIP 1374
CGKTD*S+P
Sbjct: 332 CGKTD*SVP 306
Score = 23.1 bits (44), Expect(9) = 2e-058
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 1280 EFSSRVVKGGCC 1315
EFS RVVK G C
Sbjct: 208 EFSYRVVKEGAC 243
Score = 22.6 bits (43), Expect(9) = 2e-058
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 1403 GGSWNRCWV 1429
GG W+ CWV
Sbjct: 333 GGVWDCCWV 359
Score = 21.7 bits (41), Expect(8) = 6e-056
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -2
Query: 1314 QQPPFTTLEENS 1279
Q P FTTL ENS
Sbjct: 242 QAPSFTTL*ENS 207
>gb|BI074265.1|BI074265 IP1_13_G03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 78.5 bits (165), Expect(10) = 1e-056
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2 / +2
Query: 1103 LLPKEKGSANECLPFRG*LPLANCKTRW*IRSVPC 1207
LLPKEKGSANECLPF+G LPLANCKTRW*I SV C
Sbjct: 2 LLPKEKGSANECLPFQGSLPLANCKTRW*IHSVSC 106
Score = 74.8 bits (157), Expect(8) = 6e-043
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 1104 CCPKRKGAPTNACHSGADCP*RIARRDGRF 1193
CCPKRKGAPTNACHS A CP*RIARRDGRF
Sbjct: 3 CCPKRKGAPTNACHSRAHCP*RIARRDGRF 92
Score = 74.4 bits (156), Expect(7) = 3e-047
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -3 / -1
Query: 1207 TRNTTNLPSRLAIR*GQSAPEWQAFVGAPFLFGQQ 1103
TRNT NLPSRLAIR*GQ A EWQAFVGAPFLFGQQ
Sbjct: 106 TRNTMNLPSRLAIR*GQ*ALEWQAFVGAPFLFGQQ 2
Score = 74.4 bits (156), Expect(9) = 1e-054
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -1 / -2
Query: 1212 SKQGTLRIYHLVLQFARGNQPRNGKHSLALPFSLGSS 1102
++Q TL IYHLVLQFARGN+P NGKHSLALPFSLGSS
Sbjct: 111 NRQETL*IYHLVLQFARGNEPWNGKHSLALPFSLGSS 1
Score = 62.5 bits (130), Expect(10) = 1e-056
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +1 / +2
Query: 1294 GGERWLL*FYFWLPPHDADSKICGCRLG 1377
G R LL*FYFWLPPHDADSKICG RLG
Sbjct: 206 GERRCLL*FYFWLPPHDADSKICGSRLG 289
Score = 61.1 bits (127), Expect(7) = 3e-047
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2 / -2
Query: 1415 SRNLPCGKTD*SIPSLQPQILESASCGGNQK*NYSSHLSPP 1293
S+ P K PSL PQILESASCGGNQK*NYS HL P
Sbjct: 327 SQTPPAAKLTSPFPSLLPQILESASCGGNQK*NYSRHLLSP 205
Score = 58.8 bits (122), Expect(8) = 6e-043
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / +3
Query: 1295 VVKGGCCNFIFGYLHMMLIPRFVVVD 1372
V +G CCNFIFGYLHM LIPRFVVVD
Sbjct: 207 VKEGACCNFIFGYLHMTLIPRFVVVD 284
Score = 58.3 bits (121), Expect(9) = 1e-054
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / -3
Query: 1372 VYNHKSWNQHHVEVTKNKITAATFHH 1295
VY HKSWNQ HVEVTKNKITA TF H
Sbjct: 284 VYYHKSWNQRHVEVTKNKITAGTFFH 207
Score = 56.1 bits (116), Expect(6) = 2e-032
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = -2 / -3
Query: 1208 NKEHYESTISSCNSLGAISPGMASI 1134
+K+HYESTISSCNSLGA+SPGMASI
Sbjct: 107 DKKHYESTISSCNSLGAMSPGMASI 33
Score = 53.8 bits (111), Expect(6) = 2e-032
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 1374 QSTTTNLGISIMWR*PKIKLQQPPFTT 1294
+STTTNLGIS+MWR*PKIKLQQ P T
Sbjct: 286 KSTTTNLGISVMWR*PKIKLQQAPSFT 206
Score = 42.3 bits (86), Expect(10) = 1e-056
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +3
Query: 1211 DSAFSNVASCLLVWPREPS 1267
DSAF+NVASCLLVWPR S
Sbjct: 108 DSAFANVASCLLVWPRNAS 164
Score = 41.4 bits (84), Expect(9) = 1e-054
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 1266 EGSRGQTNKQEATLEKAESKQGTLRI 1189
E RGQTNKQEATL KAES + T+ +
Sbjct: 163 EAFRGQTNKQEATLAKAESTRNTMNL 86
Score = 40.9 bits (83), Expect(7) = 3e-047
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 1267 RGLPRPDQQTGSYIRESRIKTRN 1199
RG+PRPDQQTGSYI ES I ++
Sbjct: 164 RGIPRPDQQTGSYISES*IDKKH 96
Score = 40.5 bits (82), Expect(9) = 1e-054
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / -3
Query: 1553 SIYELQLKKHTMLYHD 1506
SIY+LQLKKHTMLYHD
Sbjct: 479 SIYKLQLKKHTMLYHD 432
Score = 38.6 bits (78), Expect(7) = 3e-047
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3 / -1
Query: 1561 SLDPSMSFN*RSIQCCTTMIY 1499
+L PS++FN*RSIQCCTT+ +
Sbjct: 487 NLHPSINFN*RSIQCCTTIYH 425
Score = 36.8 bits (74), Expect(10) = 1e-056
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +1
Query: 1507 SWYSIVCFFS*SS*MD 1554
SWYSIVCFFS*S *MD
Sbjct: 433 SWYSIVCFFS*SL*MD 480
Score = 36.3 bits (73), Expect(6) = 2e-032
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2 / -2
Query: 1265 RAPEARPTNRKLH*RKQNQNK 1203
R EARPTNRKLH*RK N+ +
Sbjct: 162 RHSEARPTNRKLH*RKLNRQE 100
Score = 35.9 bits (72), Expect(8) = 6e-043
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 1506 IVVQHCMLLQLKLIDGSRLI 1565
IVVQHCMLL LK IDG R +
Sbjct: 432 IVVQHCMLL*LKFIDGWRFL 491
Score = 35.4 bits (71), Expect(9) = 1e-054
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -1
Query: 1516 CTTMIYHGQSTRTNV 1472
C T IYHGQSTRTNV
Sbjct: 445 CCTTIYHGQSTRTNV 401
Score = 34.5 bits (69), Expect(7) = 3e-047
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 1469 EPLLTHPGKHSC*RP 1425
EPLLTHP KHSC* P
Sbjct: 379 EPLLTHPVKHSC*DP 335
Score = 34.5 bits (69), Expect(6) = 2e-032
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1 / -2
Query: 1554 IHL*ASTEEAYNAVPR 1507
IHL* ST+EAYNAVPR
Sbjct: 480 IHL*TSTKEAYNAVPR 433
Score = 33.1 bits (66), Expect(9) = 1e-054
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 1480 TNVKSRC*HIQASTAAE 1430
T KSRC*HIQ+STAAE
Sbjct: 390 TEHKSRC*HIQSSTAAE 340
Score = 31.8 bits (63), Expect(10) = 1e-056
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 1431 SAAVLAWMC*QRLLTLV 1481
SAAVL WMC*QRLL V
Sbjct: 341 SAAVLDWMC*QRLLCSV 391
Score = 30.4 bits (60), Expect(10) = 1e-056
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 1470 LTLVRVLCPWYIIV 1511
LTLVRVLCP YI+V
Sbjct: 399 LTLVRVLCP*YIVV 440
Score = 29.9 bits (59), Expect(8) = 6e-043
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 1472 NIGACALPMVY 1504
NIGACALPM+Y
Sbjct: 401 NIGACALPMIY 433
Score = 29.9 bits (59), Expect(9) = 1e-054
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 1444 STAAEDPTAVPGTSPAAKLTSPFP 1373
S+ A + T PAAKLTSPFP
Sbjct: 357 SSTAAETQQQSQTPPAAKLTSPFP 286
Score = 27.6 bits (54), Expect(10) = 1e-056
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +1
Query: 1556 QADRNLDISVLYYS 1597
+ADRNL ISV+YYS
Sbjct: 508 KADRNLVISVVYYS 549
Score = 27.6 bits (54), Expect(7) = 3e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 1503 YTMGKAHAPML 1471
Y MGKAHAPML
Sbjct: 432 YIMGKAHAPML 400
Score = 27.2 bits (53), Expect(9) = 1e-054
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / -2
Query: 1597 RIVQYRYIKVPIS 1559
RIV YRY KVPIS
Sbjct: 549 RIVNYRYNKVPIS 511
Score = 26.7 bits (52), Expect(8) = 6e-043
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1374 GNGLVSFAAGEV 1409
GNGLVSFAAG V
Sbjct: 287 GNGLVSFAAGGV 322
Score = 26.7 bits (52), Expect(10) = 1e-056
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 1373 WEWTSQFCRR 1402
WE TSQFCRR
Sbjct: 286 WERTSQFCRR 315
Score = 26.7 bits (52), Expect(8) = 6e-043
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / +1
Query: 1242 CWSGLGSPRLSSASFLPGW 1298
CWSGLG P S S P +
Sbjct: 139 CWSGLGMPLEPSTSKCPSF 195
Score = 26.3 bits (51), Expect(6) = 2e-032
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 1470 RAAVNTSRQAQLLK 1429
RAA NTS QAQLL+
Sbjct: 380 RAAANTSSQAQLLR 339
Score = 24.4 bits (47), Expect(8) = 6e-043
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 1433 SSCACLDVLTAAL 1471
SSCA LDVL AAL
Sbjct: 343 SSCA*LDVLAAAL 381
Score = 24.0 bits (46), Expect(6) = 2e-032
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 1400 CGKTD*SIP 1374
CGKTD*S+P
Sbjct: 313 CGKTD*SVP 287
Score = 23.5 bits (45), Expect(8) = 6e-043
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 1557 RLIGTLIYLYCTIL 1598
+LIGTL+YL TIL
Sbjct: 509 KLIGTLLYL*FTIL 550
Score = 23.1 bits (44), Expect(10) = 1e-056
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +3
Query: 1280 EFSSRVVKGGCC 1315
EFS RVVK G C
Sbjct: 189 EFSYRVVKEGAC 224
Score = 22.6 bits (43), Expect(10) = 1e-056
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +2
Query: 1403 GGSWNRCWV 1429
GG W+ CWV
Sbjct: 314 GGVWDCCWV 340
Score = 22.1 bits (42), Expect(7) = 3e-047
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 1596 E*YSTDISRFLSA 1558
E* +TDI+RFLSA
Sbjct: 548 E**TTDITRFLSA 510
Score = 21.7 bits (41), Expect(9) = 1e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -1
Query: 1314 QQPPFTTLEENS 1279
Q P FTTL ENS
Sbjct: 223 QAPSFTTL*ENS 188
>gb|CW483252.1|CW483252 fsbb001f244m21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f244m21, DNA
sequence
Length = 728
Score = 149 bits (320), Expect(2) = 6e-050
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +1 / +1
Query: 229 RSVKRETLKLIETFVDKAEDLPHVGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATII 408
RSVKRETLKLIETFVDKAEDLPH+GKQFVPPMMDPVLGDYARNVPDARESEVLSLFATII
Sbjct: 523 RSVKRETLKLIETFVDKAEDLPHIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATII 702
Query: 409 NKY 417
NKY
Sbjct: 703 NKY 711
Score = 137 bits (293), Expect(2) = 2e-043
Identities = 60/63 (95%), Positives = 60/63 (95%)
Frame = -2 / -1
Query: 416 YLLMIVANKDRTSDSLASGTFLA*SPRTGSIIGGTNCFPTCGKSSALSTKVSINFRVSLL 237
YLLMIVAN DRTSDSLASGTFLA*SP TGSIIGGTNCFP CGKSSALSTKVSINFRVSLL
Sbjct: 710 YLLMIVANNDRTSDSLASGTFLA*SPSTGSIIGGTNCFPICGKSSALSTKVSINFRVSLL 531
Query: 236 TDL 228
TDL
Sbjct: 530 TDL 522
Score = 136 bits (291), Expect(2) = 7e-042
Identities = 54/63 (85%), Positives = 56/63 (88%)
Frame = -1 / -3
Query: 417 VLVNDCCKQGQNFRLPCIGYISSIITKNRIHHWWYKLLSYMWQIFRLVHKSLDQL*GFPL 238
+LVNDCCKQ QNFRLPCI YISSIITK IHHWW KLLSYMW IF L+HKSLDQL*GFPL
Sbjct: 711 ILVNDCCKQRQNFRLPCIRYISSIITKYGIHHWWNKLLSYMW*IFCLIHKSLDQL*GFPL 532
Query: 237 DRS 229
DRS
Sbjct: 531 DRS 523
Score = 131 bits (280), Expect(2) = 1e-041
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3 / +3
Query: 228 EICQEGNPKVDRDFCGQGGRFATCRKAVCTTNDGSCSW*LC*KCTRCKGV*SSVLVCNNH 407
+ICQEGNPKVDRDFCG G RF T RKAVC+TNDGS +W*LC*KCT CKGV*SSV+VCNNH
Sbjct: 522 QICQEGNPKVDRDFCG*GRRFTTYRKAVCSTNDGSRTW*LC*KCT*CKGV*SSVVVCNNH 701
Query: 408 *QV 416
*QV
Sbjct: 702 *QV 710
Score = 121 bits (259), Expect(2) = 3e-038
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 230 DLSRGKP*S*SRLLWTRRKICHM*ESSLYHQ*WILFLVIMLEMYPMQGSLKFCPCLQQSL 409
DLSRGKP*S*SRLLW R+KI H+*ESSL+HQ*WI +LVIMLEMY MQGSLKFC CLQQSL
Sbjct: 524 DLSRGKP*S*SRLLWIRQKIYHI*ESSLFHQ*WIPYLVIMLEMYLMQGSLKFCRCLQQSL 703
Query: 410 TS 415
TS
Sbjct: 704 TS 709
Score = 92.3 bits (195), Expect(2) = 5e-028
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = -3 / -2
Query: 367 HRVHF*HNHQEQDPSLVVQTAFLHVANLPPCPQKSRSTLGFPS*QISRVLQMT 209
H+VHF*HNHQ +DPSLV QTAFL+V NL P PQKSRSTLGFPS*QI ++T
Sbjct: 661 HQVHF*HNHQVRDPSLVEQTAFLYVVNLLPYPQKSRSTLGFPS*QICHKYKLT 503
Score = 74.4 bits (156), Expect(2) = 6e-050
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3 / +2
Query: 138 NSLQNVQRACIKHDC*RRTLCLKDVICKTLEI 233
+S QNVQRACIKHDC*RRTLCLKD+ICKTLE+
Sbjct: 194 SSYQNVQRACIKHDC*RRTLCLKDIICKTLEV 289
Score = 65.2 bits (136), Expect(2) = 2e-043
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -2 / -2
Query: 230 LKSFTNDVLEAKGPPSAIVLDTSSLYIL 147
LKSFTNDVLEAKGPPSAIVLDTSSLYIL
Sbjct: 286 LKSFTNDVLEAKGPPSAIVLDTSSLYIL 203
Score = 64.8 bits (135), Expect(2) = 1e-041
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1 / +3
Query: 148 RMYSELVSSTIAEGGPFASRTSFVKLLR 231
RMYSELVSSTIAEGGPFASRTSFVKLLR
Sbjct: 204 RMYSELVSSTIAEGGPFASRTSFVKLLR 287
Score = 63.4 bits (132), Expect(2) = 3e-038
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +2 / +1
Query: 146 TECTASLYQARLLKEDPLPQGRHL*NS*DLS 238
+ECTASLYQARLLKEDPLPQG HL*NS* ++
Sbjct: 202 SECTASLYQARLLKEDPLPQGHHL*NS*GMN 294
Score = 60.6 bits (126), Expect(2) = 7e-042
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -3 / -3
Query: 229 SRVLQMTSLRQRVLLQQSCLIQARCTF 149
SRVLQM SLRQRVLLQQSCLIQARCTF
Sbjct: 285 SRVLQMMSLRQRVLLQQSCLIQARCTF 205
Score = 58.3 bits (121), Expect(2) = 5e-028
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -1 / -1
Query: 228 QEFYK*RP*GKGSSFSNRA*YKLAVHS 148
QEFYK* P*GKGSSFSNRA*YKLAVHS
Sbjct: 284 QEFYK*CP*GKGSSFSNRA*YKLAVHS 204
>gb|BE362112.1|BE362112 DG1_84_A07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 177 bits (382), Expect = 3e-043
Identities = 68/76 (89%), Positives = 70/76 (92%)
Frame = +3 / +2
Query: 3 PKY*YPEEPRCYPISSQHSTDKHKCCELTWATLLPTDFTNFLGHANSLQNVQRACIKHDC 182
PK+*YPEEPRCY ISSQH TDKHKCCE WATLLPTDF NFLGHA SLQNVQRACIKHDC
Sbjct: 332 PKH*YPEEPRCYQISSQHPTDKHKCCEFPWATLLPTDFANFLGHAYSLQNVQRACIKHDC 511
Query: 183 *RRTLCLKDVICKTLE 230
*RRTLCLKD+ICKTLE
Sbjct: 512 *RRTLCLKDIICKTLE 559
Score = 168 bits (362), Expect = 2e-040
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1 / +3
Query: 1 SLSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI 180
S SIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI
Sbjct: 330 SQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI 509
Query: 181 AEGGPFASRTSFVKLL 228
AEGGPFASRTSFVKLL
Sbjct: 510 AEGGPFASRTSFVKLL 557
Score = 167 bits (359), Expect = 5e-040
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = -2 / -1
Query: 230 LKSFTNDVLEAKGPPSAIVLDTSSLYIL*TVSMSKKISEICGKKCGPSELATLVFVCRML 51
LKSFTNDVLEAKGPPSAIVLDTSSLYIL*TVSMSKKISEICGKKCGP ELATLVFVCRML
Sbjct: 559 LKSFTNDVLEAKGPPSAIVLDTSSLYIL*TVSMSKKISEICGKKCGPRELATLVFVCRML 380
Query: 50 RTDRITSWFFRISIL 6
RTD ITSWFFRIS+L
Sbjct: 379 RTDLITSWFFRISML 335
Score = 153 bits (328), Expect = 9e-036
Identities = 67/73 (91%), Positives = 67/73 (91%)
Frame = +2 / +1
Query: 11 LIS*RTKMLSDQFSTFYRQTQVLRAHLGHTSSHRFH*FSWTC*QSTECTASLYQARLLKE 190
LIS*RTKMLSDQFST YRQTQVLR LGHTSSHRF *FSWTC QSTECTASLYQARLLKE
Sbjct: 340 LIS*RTKMLSDQFSTSYRQTQVLRVPLGHTSSHRFR*FSWTCLQSTECTASLYQARLLKE 519
Query: 191 DPLPQGRHL*NS* 229
DPLPQG HL*NS*
Sbjct: 520 DPLPQGHHL*NS* 558
Score = 153 bits (328), Expect = 9e-036
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = -1 / -3
Query: 228 QEFYK*RP*GKGSSFSNRA*YKLAVHSVDC*HVQEN**NLWEEVWPK*ARNTCVCL*NVE 49
QEFYK* P*GKGSSFSNRA*YKLAVHSVDC HVQEN* NLWEEVWPK RNTCVCL*+VE
Sbjct: 557 QEFYK*CP*GKGSSFSNRA*YKLAVHSVDCKHVQEN*RNLWEEVWPKGTRNTCVCL*DVE 378
Query: 48 N*SDNILVLQDIN 10
N*SDNILVLQDIN
Sbjct: 377 N*SDNILVLQDIN 339
Score = 149 bits (321), Expect = 8e-035
Identities = 67/76 (88%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 229 SRVLQMTSLRQRVLLQQSCLIQARCTFCRLLACPRKLVKSVGRSVAQVSSQHLCLSVEC* 50
SRVLQM SLRQRVLLQQSCLIQARCTFCRL ACPRKL KSVGRSVAQ +SQHLCLSV C*
Sbjct: 558 SRVLQMMSLRQRVLLQQSCLIQARCTFCRL*ACPRKLAKSVGRSVAQGNSQHLCLSVGC* 379
Query: 49 ELIG*HLGSSGYQYLG 2
ELI *HLGSSGYQ G
Sbjct: 378 ELI**HLGSSGYQCFG 331
>gb|CW330971.1|CW330971 104_828_11480660_148_36021_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480660, DNA
sequence
Length = 715
Score = 87.7 bits (185), Expect(3) = 6e-040
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1 / -2
Query: 478 EMITKNFEDYPEHRLKFFSLLRAIGTHCFQALIQLSSQ 591
+MITKNFEDYPEHRLKFFS LRAIGTHCFQA IQLSSQ
Sbjct: 354 QMITKNFEDYPEHRLKFFSSLRAIGTHCFQAFIQLSSQ 241
Score = 72.1 bits (151), Expect(3) = 3e-034
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = -2 / +2
Query: 590 *LESWINAWKQWVPIARSKEKNLRRCSG*SSKFLVII 480
*LES I AWKQ VPIARS+EKNLRRCSG*SSKFLVII
Sbjct: 242 *LES*IKAWKQCVPIARSEEKNLRRCSG*SSKFLVII 352
Score = 66.1 bits (138), Expect(3) = 6e-040
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1 / -3
Query: 589 QQLKLVIDSINWAFRHTERNIAETGLSLL 675
QQLKLV+DSI+WAFRHTERNIAETGLSLL
Sbjct: 89 QQLKLVMDSISWAFRHTERNIAETGLSLL 3
Score = 63.8 bits (133), Expect(3) = 3e-034
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = -2 / +1
Query: 677 NNRLRPVSAIFLSVCLNAQLIESITSFNC* 588
NNRLRPVSAIFLSVC NAQL+ESITSF+C*
Sbjct: 1 NNRLRPVSAIFLSVCRNAQLMESITSFSC* 90
Score = 57.0 bits (118), Expect(3) = 6e-040
Identities = 21/26 (80%), Positives = 26/26 (100%)
Frame = +1 / -3
Query: 406 INKYKGEMLEDVPRIFEAVFQCTLEM 483
+++YKGEMLE+VPRIFEAVFQCTLE+
Sbjct: 521 LHRYKGEMLEEVPRIFEAVFQCTLEV 444
Score = 55.6 bits (115), Expect(3) = 3e-034
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -2 / +1
Query: 494 FLVIISRVHWKTASNIRGTSSSISPLYL 411
+++ SRVHWKTAS +RGTSSSISPLYL
Sbjct: 433 YIIYTSRVHWKTASKMRGTSSSISPLYL 516
>gb|BF481289.1|BF481289 FM1_18_B02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 597
Score = 141 bits (302), Expect(2) = 1e-033
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = +1 / +1
Query: 943 SFPNMTVAEVTKFVDGLLSSKLDLPSFKNHIRDFLVQSKEFSAQDNKDLYXXXXXXXXXX 1122
SFPNMT EV KFVDGL SSK D P+FKNHIRDFLVQSKEFSAQDNKDLY
Sbjct: 1 SFPNMTPVEVAKFVDGLFSSKTDPPNFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQREK 180
Query: 1123 XXXXMLAIPGLIAPSELQDEMVDS* 1197
ML+IPGLIAP+ELQDEMVDS*
Sbjct: 181 ERQRMLSIPGLIAPNELQDEMVDS* 255
Score = 69.8 bits (146), Expect(2) = 5e-021
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = -2 / -2
Query: 1067 ENSFDCTRKSLIWFLKLGRSSFELRRPSTNLVTSATVMLG 948
ENSFD TRKSLIWFLK G S FEL+ PSTN TS VMLG
Sbjct: 125 ENSFD*TRKSLIWFLKFGGSVFELKSPSTNFATSTGVMLG 6
Score = 53.8 bits (111), Expect(2) = 5e-021
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = -1 / -1
Query: 1191 IYHLVLQFARGNQPRNGKHSLALPFSLGSSLF 1096
I+HL+LQF RG++P NGKH+LA F L SSLF
Sbjct: 249 IHHLILQFIRGDEPWNGKHTLAFLFPLSSSLF 154
Score = 24.9 bits (48), Expect(2) = 1e-033
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 1255 SGALVFQVRVFFQGGER 1305
SGALV + ++FF G ER
Sbjct: 293 SGALVLKAQLFF*GDER 343
>gb|CW330970.1|CW330970 104_828_11480660_116_36022_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480660, DNA
sequence
Length = 714
Score = 90.4 bits (191), Expect(2) = 4e-028
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1 / +2
Query: 478 EMITKNFEDYPEHRLKFFSLLRAIGTHCFQALIQLSSQ 591
+MITKNFEDYPEHRLKFFSLLRAIGTHCFQA IQLSSQ
Sbjct: 503 QMITKNFEDYPEHRLKFFSLLRAIGTHCFQAFIQLSSQ 616
Score = 73.9 bits (155), Expect(2) = 8e-023
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = -2 / -1
Query: 590 *LESWINAWKQWVPIARSKEKNLRRCSG*SSKFLVII 480
*LES I AWKQ VPIARSKEKNLRRCSG*SSKFLVII
Sbjct: 615 *LES*IKAWKQCVPIARSKEKNLRRCSG*SSKFLVII 505
Score = 57.0 bits (118), Expect(2) = 4e-028
Identities = 21/26 (80%), Positives = 26/26 (100%)
Frame = +1 / +3
Query: 406 INKYKGEMLEDVPRIFEAVFQCTLEM 483
+++YKGEMLE+VPRIFEAVFQCTLE+
Sbjct: 336 LHRYKGEMLEEVPRIFEAVFQCTLEV 413
Score = 55.6 bits (115), Expect(2) = 8e-023
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -2 / -3
Query: 494 FLVIISRVHWKTASNIRGTSSSISPLYL 411
+++ SRVHWKTAS +RGTSSSISPLYL
Sbjct: 424 YIIYTSRVHWKTASKMRGTSSSISPLYL 341
>gb|BF588401.1|BF588401 FM1_36_C02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 520
Score = 117 bits (250), Expect(2) = 1e-026
Identities = 52/72 (72%), Positives = 55/72 (76%)
Frame = +1 / +1
Query: 982 VDGLLSSKLDLPSFKNHIRDFLVQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLAIPGLIA 1161
VDGL SSK D P+FKNHIRDFLVQSKEFSAQDNKDLY ML+IPGLIA
Sbjct: 4 VDGLFSSKTDPPNFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQREKERQCMLSIPGLIA 183
Query: 1162 PSELQDEMVDS* 1197
P+ELQDEMVDS*
Sbjct: 184 PNELQDEMVDS* 219
Score = 24.9 bits (48), Expect(2) = 1e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 1255 SGALVFQVRVFFQGGER 1305
SGALV + ++FF G ER
Sbjct: 257 SGALVLKAQLFF*GDER 307
>gb|CB924654.1|CB924654 ABA1_1_G09.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_1_G09_A012 3', mRNA sequence
Length = 363
Score = 57.0 bits (118), Expect(7) = 2e-026
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 1294 GGERWLL*FYFWLPPHDADSKICGCRLG 1377
G R LL*FYFW PPHDADSKICG LG
Sbjct: 7 GERRSLL*FYFWFPPHDADSKICGSGLG 90
Score = 52.8 bits (109), Expect(6) = 3e-026
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 1372 VYNHKSWNQHHVEVTKNKITAATFHH 1295
V+ HKSWNQ HVE TKNKITA TF H
Sbjct: 85 VHYHKSWNQRHVEGTKNKITAGTFFH 8
Score = 36.8 bits (74), Expect(6) = 3e-026
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -3 / -1
Query: 1561 SLDPSMSFN*RSIQCCTTMIY 1499
+L PS++FN*R IQCCTT+ +
Sbjct: 288 NLHPSINFN*RGIQCCTTIYH 226
Score = 35.4 bits (71), Expect(6) = 3e-026
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -1
Query: 1516 CTTMIYHGQSTRTNV 1472
C T IYHGQSTRTNV
Sbjct: 246 CCTTIYHGQSTRTNV 202
Score = 34.1 bits (68), Expect(7) = 2e-026
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 1471 *HWCVCFAHGISSWYSIVCF 1530
*HWCVCFAH IS + + F
Sbjct: 201 *HWCVCFAHDISWYSIVSLF 260
Score = 31.8 bits (63), Expect(6) = 3e-026
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 1480 TNVKSRC*HIQASTAAE 1430
T K+RC*HIQ+STAAE
Sbjct: 191 TEHKNRC*HIQSSTAAE 141
Score = 30.9 bits (61), Expect(7) = 2e-026
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 1506 IVVQHCMLLQLKLIDGSRLI 1565
IVVQHC+ L LK IDG R +
Sbjct: 233 IVVQHCIPL*LKFIDGWRFL 292
Score = 29.9 bits (59), Expect(7) = 2e-026
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 1431 SAAVLAWMC*QRLLTLV 1481
SAAVL WMC*QR L V
Sbjct: 142 SAAVLDWMC*QRFLCSV 192
Score = 28.6 bits (56), Expect(6) = 3e-026
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 1444 STAAEDPTAVPGTSPAAKLTSPFP 1373
S+ A + T PAAKLT+PFP
Sbjct: 158 SSTAAETQQQSQTPPAAKLTNPFP 87
Score = 26.7 bits (52), Expect(7) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1374 GNGLVSFAAGEV 1409
GNGLVSFAAG V
Sbjct: 88 GNGLVSFAAGGV 123
Score = 24.9 bits (48), Expect(7) = 2e-026
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 1556 QADRNLDISVLYYS 1597
+ADR L ISV+YYS
Sbjct: 309 KADRTLVISVVYYS 350
Score = 24.0 bits (46), Expect(6) = 3e-026
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 1597 RIVQYRYIKVPIS 1559
RIV YRY K PIS
Sbjct: 350 RIVNYRYNKGPIS 312
Score = 22.6 bits (43), Expect(7) = 2e-026
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +1
Query: 1403 GGSWNRCWV 1429
GG W+ CWV
Sbjct: 115 GGVWDCCWV 141
>gb|CW483251.1|CW483251 fsbb001f244m21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f244m21, DNA
sequence
Length = 311
Score = 89.0 bits (188), Expect(2) = 4e-026
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +1 / -2
Query: 460 VFQCTLEMITKNFEDYPEHRLKFFSLLRAIGTHCFQALIQLSS 588
V+ + +MITKNFEDYP+HRLKFFSLLRAIGTHCFQ LIQLSS
Sbjct: 148 VYSLSYQMITKNFEDYPDHRLKFFSLLRAIGTHCFQPLIQLSS 20
Score = 75.8 bits (159), Expect(2) = 3e-021
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3 / -1
Query: 480 DDY*EL*RLS*APPQIFFFASCNWHPLLPSINPAFKS 590
DDY*EL*RLS* PPQIFFFAS NW+ LLP+INPAFKS
Sbjct: 128 DDY*EL*RLS*PPPQIFFFASRNWYSLLPTINPAFKS 18
Score = 75.3 bits (158), Expect(2) = 5e-021
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = -2 / +3
Query: 587 LESWINAWKQWVPIARSKEKNLRRCSG*SSKFLVII 480
LESWIN WKQ VPIARSKEKNLRR SG*SSKFLVII
Sbjct: 21 LESWINGWKQ*VPIARSKEKNLRRWSG*SSKFLVII 128
Score = 51.5 bits (106), Expect(2) = 4e-026
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -3
Query: 411 QVQRGNA*GCASYI*GCFPVH 473
QVQRGNA*GC SYI*GCFPVH
Sbjct: 291 QVQRGNA*GCPSYI*GCFPVH 229
Score = 48.7 bits (100), Expect(2) = 3e-021
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / -1
Query: 418 KGEMLEDVPRIFEAVFQCTLEM 483
KGEMLEDVPRIFEAVFQ TLE+
Sbjct: 284 KGEMLEDVPRIFEAVFQSTLEV 219
Score = 48.3 bits (99), Expect(2) = 5e-021
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2 / +1
Query: 479 SRVHWKTASNIRGTSSSISPLYL 411
SRV WKTASNIRGTSSSISPL L
Sbjct: 223 SRVDWKTASNIRGTSSSISPLDL 291
>gb|CF760278.1|CF760278 DSAF1_57_G02.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_57_G02_A011 5', mRNA sequence
Length = 469
Score = 40.5 bits (82), Expect(6) = 4e-022
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / -1
Query: 1553 SIYELQLKKHTMLYHD 1506
SIY+LQLKKHTMLYHD
Sbjct: 229 SIYKLQLKKHTMLYHD 182
Score = 35.9 bits (72), Expect(7) = 2e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 1506 IVVQHCMLLQLKLIDGSRLI 1565
IVVQHCMLL LK IDG R +
Sbjct: 182 IVVQHCMLL*LKFIDGWRFL 241
Score = 35.4 bits (71), Expect(6) = 4e-022
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 1516 CTTMIYHGQSTRTNV 1472
C T IYHGQSTRTNV
Sbjct: 195 CCTTIYHGQSTRTNV 151
Score = 34.1 bits (68), Expect(7) = 2e-022
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 1471 *HWCVCFAHGISSWYSIVCF 1530
*HWCVCFAH IS + + F
Sbjct: 150 *HWCVCFAHDISWYSIVCFF 209
Score = 33.1 bits (66), Expect(6) = 4e-022
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 1480 TNVKSRC*HIQASTAAE 1430
T KSRC*HIQ+STAAE
Sbjct: 140 TEHKSRC*HIQSSTAAE 90
Score = 33.1 bits (66), Expect(7) = 2e-022
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 1339 HDADSKICGCRLG 1377
HDADSKICG RLG
Sbjct: 1 HDADSKICGSRLG 39
Score = 31.8 bits (63), Expect(7) = 2e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3 / +1
Query: 1431 SAAVLAWMC*QRLLTLV 1481
SAAVL WMC*QRLL V
Sbjct: 91 SAAVLDWMC*QRLLCSV 141
Score = 29.9 bits (59), Expect(6) = 4e-022
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 1444 STAAEDPTAVPGTSPAAKLTSPFP 1373
S+ A + T PAAKLTSPFP
Sbjct: 107 SSTAAETQQQSQTPPAAKLTSPFP 36
Score = 28.6 bits (56), Expect(6) = 4e-022
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1372 VYNHKSWNQHH 1340
VY HKSWNQ H
Sbjct: 34 VYYHKSWNQRH 2
Score = 27.6 bits (54), Expect(7) = 2e-022
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +3
Query: 1556 QADRNLDISVLYYS 1597
+ADRNL ISV+YYS
Sbjct: 258 KADRNLVISVVYYS 299
Score = 27.2 bits (53), Expect(6) = 4e-022
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 1597 RIVQYRYIKVPIS 1559
RIV YRY KVPIS
Sbjct: 299 RIVNYRYNKVPIS 261
Score = 26.7 bits (52), Expect(7) = 2e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 1373 WEWTSQFCRR 1402
WE TSQFCRR
Sbjct: 36 WERTSQFCRR 65
Score = 22.6 bits (43), Expect(7) = 2e-022
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +1
Query: 1403 GGSWNRCWV 1429
GG W+ CWV
Sbjct: 64 GGVWDCCWV 90
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,977,765,207
Number of Sequences: 832831
Number of extensions: 29687903
Number of successful extensions: 136544
Number of sequences better than 1.0e-020: 16
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 55762457520
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)