TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L18925.2.1
(1221 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 346 5e-094
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 306 5e-082
gb|BG049402.1|BG049402 OV1_19_E04.g1_A002 Ovary 1 (OV1) Sor... 210 2e-074
gb|BG411765.1|BG411765 OV2_37_G09.g1_A002 Ovary 2 (OV2) Sor... 172 2e-072
gb|BE918286.1|BE918286 OV1_1_E07.g1_A002 Ovary 1 (OV1) Sorg... 203 4e-067
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 164 5e-056
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 164 2e-055
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 164 1e-054
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 164 5e-052
gb|CW313121.1|CW313121 104_803_11471121_148_35790_043 Sorgh... 124 1e-051
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 164 8e-051
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 164 3e-047
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 164 2e-043
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 118 2e-041
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 118 7e-040
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 118 1e-039
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 164 2e-039
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 164 3e-039
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 164 3e-039
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 164 3e-039
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 116 5e-039
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 162 1e-038
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 103 2e-038
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 116 2e-038
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 116 3e-038
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 160 5e-038
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 158 1e-037
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 158 1e-037
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 107 2e-037
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 97 4e-037
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 129 1e-035
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 109 3e-035
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 145 1e-033
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 145 1e-033
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 145 1e-033
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 145 1e-033
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 145 1e-033
gb|BG054220.1|BG054220 OV2_3_G05.g1_A002 Ovary 2 (OV2) Sorg... 66 1e-032
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 119 2e-032
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 134 3e-030
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 134 3e-030
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 134 3e-030
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 134 3e-030
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 134 3e-030
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 132 1e-029
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 132 1e-029
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 130 4e-029
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 129 9e-029
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 126 9e-028
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 126 9e-028
gb|BE354988.1|BE354988 DG1_10_H09.b1_A002 Dark Grown 1 (DG1... 123 4e-027
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 122 1e-026
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 121 3e-026
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 120 4e-026
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 120 4e-026
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 120 4e-026
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 118 1e-025
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 118 1e-025
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 118 1e-025
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 118 1e-025
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 118 1e-025
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 118 1e-025
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 118 1e-025
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 118 1e-025
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 117 4e-025
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 117 4e-025
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 117 4e-025
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 117 4e-025
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 116 9e-025
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 115 1e-024
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 115 1e-024
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 115 1e-024
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 115 1e-024
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 114 2e-024
gb|BF656758.1|BF656758 OV2_21_E10.g1_A002 Ovary 2 (OV2) Sor... 114 3e-024
gb|BG605915.1|BG605915 RHIZ2_83_B06.g1_A003 Rhizome2 (RHIZ2... 84 4e-024
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 112 1e-023
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 111 2e-023
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 110 4e-023
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 110 4e-023
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 110 4e-023
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 110 4e-023
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 110 4e-023
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 110 6e-023
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 109 1e-022
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 109 1e-022
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 109 1e-022
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 108 2e-022
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 108 2e-022
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 108 2e-022
gb|CW199961.1|CW199961 104_625_11183794_116_36864_043 Sorgh... 105 1e-021
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 105 1e-021
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 105 1e-021
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 105 1e-021
gb|BG357559.1|BG357559 OV2_31_D08.g1_A002 Ovary 2 (OV2) Sor... 84 3e-021
gb|BG739474.1|BG739474 EM1_81_D03.b1_A002 Embryo 1 (EM1) So... 104 4e-021
gb|BM325449.1|BM325449 PIC1_44_F08.b1_A002 Pathogen-infecte... 104 4e-021
gb|CD431870.1|CD431870 ETH1_11_B03.g1_A002 Ethylene-treated... 104 4e-021
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 104 4e-021
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 104 4e-021
gb|AW681038.1|AW681038 WS1_8_D09.b1_A002 Water-stressed 1 (... 103 5e-021
gb|BM324114.1|BM324114 PIC1_24_D02.b1_A002 Pathogen-infecte... 103 5e-021
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 102 9e-021
>gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 475
Score = 346 bits (749), Expect = 5e-094
Identities = 148/156 (94%), Positives = 154/156 (98%)
Frame = -1 / +1
Query: 1026 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSGPPLLEH 847
GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKAT+ERYKK HTVGSSSGPPLLEH
Sbjct: 7 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKVHTVGSSSGPPLLEH 186
Query: 846 NAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSE 667
NAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNL+LKELKQLESRLEKGISK+RARK+E
Sbjct: 187 NAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLTLKELKQLESRLEKGISKVRARKNE 366
Query: 666 LLAAEISYMAKRETELQNDHMTLRTKIEEGEQQLQQ 559
LLAAEI+YMAKRETELQNDHM L+TKIEEGEQQLQQ
Sbjct: 367 LLAAEINYMAKRETELQNDHMNLKTKIEEGEQQLQQ 474
Score = 279 bits (603), Expect = 7e-074
Identities = 112/127 (88%), Positives = 117/127 (92%)
Frame = +3 / -1
Query: 558 PAAAVALPPQSWS*GSCGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLSQGGSPAASAP* 737
PAAAVALPPQSWS*GSCGHSE QSPFWPCN*SPQPAAHSSWP* *RCLSQGGSPAASAP*
Sbjct: 475 PAAAVALPPQSWS*GSCGHSEVQSPFWPCN*SPQPAAHSSWP*P*RCLSQGGSPAASAP* 296
Query: 738 VTGFPRSHQPSAC*CFAASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVPSCTSQQ*P 917
V+GFP++H+PSAC*CFAAS SGCAVL ILAGRIAGHCAL GAQRK+QRCVPSCTSQ *P
Sbjct: 295 VSGFPQNHRPSAC*CFAASESGCAVLRILAGRIAGHCALRVGAQRKTQRCVPSCTSQS*P 116
Query: 918 *HCCWHT 938
CCW T
Sbjct: 115 SRCCWRT 95
Score = 238 bits (514), Expect = 1e-061
Identities = 103/119 (86%), Positives = 106/119 (89%)
Frame = -3 / +3
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PLRV QQQ +GY *EVQEGTHRW+FLWAP RAQCPAILPARI KTAQPD DAAKH*QAL
Sbjct: 87 PLRVRQQQREGYD*EVQEGTHRWVFLWAPTLRAQCPAILPARIRKTAQPDSDAAKH*QAL 266
Query: 766 GW*LRGKPVTQGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PHDPQDQ 590
G * GKP TQGAEAAGEPP*ERHL* QGQEE*AAGCGDQLHGQKGD* SE*PH+PQDQ
Sbjct: 267 GR*FCGKPDTQGAEAAGEPP*ERHL*GQGQEE*AAGCGDQLHGQKGD*TSE*PHEPQDQ 443
Score = 228 bits (492), Expect = 2e-058
Identities = 97/144 (67%), Positives = 101/144 (70%)
Frame = -2 / +2
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RWP S PTT RL LRGTRR+TPL LPLGP S*STMPSNSTSKN QN
Sbjct: 44 ATPRWPSSSSPAAAASTSTPTTA*RLRLRGTRRYTPLGLPLGPHS*STMPSNSTSKNPQN 223
Query: 809 CATRSRCCKTLTGTWLVTPWETCHXXXXXXXXXXXXXXXXXSGPGRVSCWLRRSVTWPKG 630
CATR RCCKTLTGTW V WET H SGPGR+SCWLRRS+TWPKG
Sbjct: 224 CATRFRCCKTLTGTWSVILWET*HSRS*SSWRAALRKASLRSGPGRMSCWLRRSITWPKG 403
Query: 629 RLSFRMTT*PSGPRLRRESNSCSR 558
RL+FRMTT* S PRLRRESNSCSR
Sbjct: 404 RLNFRMTT*TSRPRLRRESNSCSR 475
Score = 184 bits (397), Expect = 2e-045
Identities = 77/112 (68%), Positives = 79/112 (70%)
Frame = +2 / -3
Query: 692 EMPXXXXXXXXXXXXXDRFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPE 871
EMP RFPTESPTKCLLVFCSI IWLRSFADSCW*NCWALCS+SGGPE
Sbjct: 341 EMPFSRRLSSCFSSLSVRFPTESPTKCLLVFCSI*IWLRSFADSCW*NCWALCSKSGGPE 162
Query: 872 EEPTVCAFXXXXXXXXXXXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSP 1027
E+PTVC F RRPRLEKTMRATSAS RTESSYAFLRSP
Sbjct: 161 EDPTVCTFLYLSIVAFTLLLAYS*RRPRLEKTMRATSASHRTESSYAFLRSP 6
Score = 113 bits (242), Expect(2) = 7e-049
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = +1 / -2
Query: 592 GPEGHVVILKLSLPFGHVTDLRSQQLTLPGPDLRDXXXXXXXXXXXXXXXXVSHGVTNQV 771
G E HVVILK SLPFGHV DLRSQQL LPGPDLRD VSH +T+QV
Sbjct: 441 GLEVHVVILKFSLPFGHVIDLRSQQLILPGPDLRDAFLKAALQLLQLLECQVSHRITDQV 262
Query: 772 PVSVLQHLDLVAQFC*F 822
PVSVLQHL+LVAQFC F
Sbjct: 261 PVSVLQHLNLVAQFCGF 211
Score = 102 bits (218), Expect(2) = 7e-049
Identities = 44/55 (80%), Positives = 46/55 (83%)
Frame = +1 / -2
Query: 862 GPRGRANGVCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEP 1026
GPRGR NGV LLVPLN SL VVG+LVEA A EDDEGHL VA+DGELVRLLEEP
Sbjct: 171 GPRGRPNGVYLLVPLNRSLHAVVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEP 7
>gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 496
Score = 306 bits (662), Expect = 5e-082
Identities = 129/140 (92%), Positives = 135/140 (96%)
Frame = -1 / +3
Query: 1134 REEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 955
+ E+ ++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS
Sbjct: 75 QREEQAAISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 254
Query: 954 RGRLYEYANNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTN 775
RGRLYEYANNSVKAT+ERYKK HTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTN
Sbjct: 255 RGRLYEYANNSVKATIERYKKVHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTN 434
Query: 774 RHLVGDSVGNLSLKELKQLE 715
RHLVGDSVGNL+LKELKQLE
Sbjct: 435 RHLVGDSVGNLTLKELKQLE 494
Score = 205 bits (442), Expect(2) = 4e-052
Identities = 84/105 (80%), Positives = 86/105 (81%)
Frame = +2 / -1
Query: 743 RFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEEEPTVCAFXXXXXXXXX 922
RFPTESPTKCLLVFCSI IWLRSFADSCW*NCWALCS+SGGPEE+PTVC F
Sbjct: 466 RFPTESPTKCLLVFCSI*IWLRSFADSCW*NCWALCSKSGGPEEDPTVCTFLYLSIVAFT 287
Query: 923 XXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSPLRRLQKVTCR 1057
RRPRLEKTMRATSAS RTESSYAFLRSPLRRLQKVTCR
Sbjct: 286 LLLAYS*RRPRLEKTMRATSASHRTESSYAFLRSPLRRLQKVTCR 152
Score = 164 bits (352), Expect(2) = 9e-049
Identities = 70/84 (83%), Positives = 73/84 (86%)
Frame = +1 / -3
Query: 862 GPRGRANGVCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALA 1041
GPRGR NGV LLVPLN SL VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALA
Sbjct: 347 GPRGRPNGVYLLVPLNRSLHAVVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALA 168
Query: 1042 EGDLPARVVLDPLDLNPSSTHAGD 1113
EGDLPARVVLDPLDLNPS HAGD
Sbjct: 167 EGDLPARVVLDPLDLNPSPPHAGD 96
Score = 154 bits (330), Expect = 3e-036
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +3 / -2
Query: 714 SPAASAP*VTGFPRSHQPSAC*CFAASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVP 893
SPAASAP*V+GFP++H+PSAC*CFAAS SGCAVL ILAGRIAGHCAL GAQRK+QRCVP
Sbjct: 495 SPAASAP*VSGFPQNHRPSAC*CFAASESGCAVLRILAGRIAGHCALRVGAQRKTQRCVP 316
Query: 894 SCTSQQ*P*HCCWHT 938
SCTSQ *P CCW T
Sbjct: 315 SCTSQS*PSRCCWRT 271
Score = 149 bits (319), Expect(2) = 3e-052
Identities = 65/78 (83%), Positives = 67/78 (85%)
Frame = -3 / +2
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PLRV QQQ +GY *EVQEGTHRW+FLWAP RAQCPAILPARI KTAQPD DAAKH*QAL
Sbjct: 263 PLRVRQQQREGYD*EVQEGTHRWVFLWAPTLRAQCPAILPARIRKTAQPDSDAAKH*QAL 442
Query: 766 GW*LRGKPVTQGAEAAGE 713
G * GKP TQGAEAAGE
Sbjct: 443 GR*FCGKPDTQGAEAAGE 496
Score = 140 bits (300), Expect = 5e-032
Identities = 59/84 (70%), Positives = 60/84 (71%)
Frame = -2 / +1
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RWP S PTT RL LRGTRR+TPL LPLGP S*STMPSNSTSKN QN
Sbjct: 220 ATPRWPSSSSPAAAASTSTPTTA*RLRLRGTRRYTPLGLPLGPHS*STMPSNSTSKNPQN 399
Query: 809 CATRSRCCKTLTGTWLVTPWETCH 738
CATR RCCKTLTGTW V WET H
Sbjct: 400 CATRFRCCKTLTGTWSVILWET*H 471
Score = 79.0 bits (166), Expect(2) = 3e-052
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = -3 / +2
Query: 1108 QHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
QHG KD*DQEDREQHEPAGHLLQAPQ APQEGVRA
Sbjct: 101 QHGAGKD*DQEDREQHEPAGHLLQAPQRAPQEGVRA 208
Score = 51.9 bits (107), Expect(2) = 9e-049
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +1 / -3
Query: 745 VSHGVTNQVPVSVLQHLDLVAQFC*F 822
VSH +T+QVPVSVLQHL+LVAQFC F
Sbjct: 464 VSHRITDQVPVSVLQHLNLVAQFCGF 387
Score = 22.1 bits (42), Expect(2) = 4e-052
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3 / -2
Query: 1086 QSFLYPCWR 1112
QSF PCWR
Sbjct: 123 QSFPAPCWR 97
>gb|BG049402.1|BG049402 OV1_19_E04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 570
Score = 210 bits (454), Expect(5) = 2e-074
Identities = 84/94 (89%), Positives = 86/94 (91%)
Frame = +3 / -3
Query: 423 RGESTSCPASRRGRQ*RSIWYPSPRMGSAPSWWQLLLLQLTVPRSPAAAVALPPQSWS*G 602
+G STSCPASRRGRQ RSIWYPSPRMGSAP WW LLLL+ T PRSPAAAVALPPQSWS*G
Sbjct: 283 QGRSTSCPASRRGRQGRSIWYPSPRMGSAPRWWLLLLLRQTGPRSPAAAVALPPQSWS*G 104
Query: 603 SCGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLS 704
SCGHSE QSPFWPCN*SPQPAAHSSWP* *RCLS
Sbjct: 103 SCGHSEVQSPFWPCN*SPQPAAHSSWP*P*RCLS 2
Score = 201 bits (434), Expect(5) = 4e-069
Identities = 84/100 (84%), Positives = 89/100 (89%)
Frame = -1 / +1
Query: 705 EKGISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQQLQQVTVARSVXXXX 526
EKGISK+RARK+ELLAAEI+YMAKRETELQNDHM LRTKIEEGEQQLQQVTVARSV
Sbjct: 1 EKGISKVRARKNELLAAEINYMAKRETELQNDHMNLRTKIEEGEQQLQQVTVARSVAAAA 180
Query: 525 XATNLELNPFLEMDTKCFFTGGPFATLDMKCFLPGSLQQM 406
ATN+ELNPFLEMDTKCFF GGPFATLDMKCF PG Q +
Sbjct: 181 AATNVELNPFLEMDTKCFFPGGPFATLDMKCFFPGGYQML 300
Score = 196 bits (423), Expect(3) = 6e-059
Identities = 79/89 (88%), Positives = 82/89 (92%)
Frame = -2 / +2
Query: 683 GPGRVSCWLRRSVTWPKGRLSFRMTT*PSGPRLRRESNSCSR*PWHGQLQQQQLPPTWS* 504
GPGR+SCWLRRS+TWPKGRL+FRMTT* SGPRLRRESNSCSR*PW G QQQQ PPTWS*
Sbjct: 23 GPGRMSCWLRRSITWPKGRLNFRMTT*TSGPRLRRESNSCSR*PWPGLSQQQQQPPTWS* 202
Query: 503 THSWRWIPNASSLAAPSRRWT*SAFSPAA 417
THSWRWIPNASSLAAPSRRWT*SA S AA
Sbjct: 203 THSWRWIPNASSLAAPSRRWT*SASSLAA 289
Score = 166 bits (358), Expect(3) = 9e-049
Identities = 68/90 (75%), Positives = 70/90 (77%)
Frame = +1 / -1
Query: 427 EKALHVQRREGAASEEAFGIHLQEWVQLQVGGSCCCCN*PCHGHXXXXXXXXXXXGPEGH 606
E+ALHVQRREGAA EEAFGIHLQEWVQL VGG CCCC+ P HGH GPE H
Sbjct: 279 EEALHVQRREGAAREEAFGIHLQEWVQLHVGGCCCCCDRPGHGHLLQLLLSLLNLGPEVH 100
Query: 607 VVILKLSLPFGHVTDLRSQQLTLPGPDLRD 696
VVILK SLPFGHV DLRSQQL LPGPDLRD
Sbjct: 99 VVILKFSLPFGHVIDLRSQQLILPGPDLRD 10
Score = 158 bits (339), Expect(3) = 5e-046
Identities = 70/96 (72%), Positives = 72/96 (75%)
Frame = -3 / +3
Query: 703 ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PHDPQDQXXXXXXXXXXXXXXTVSCSSSS 524
ERHL* QGQEE*AAGCGDQLHGQKGD* SE*PH+PQDQ V SSSS
Sbjct: 3 ERHL*GQGQEE*AAGCGDQLHGQKGD*TSE*PHEPQDQD*GGRATAAAGDRGPVCRSSSS 182
Query: 523 CHQLGAEPILGDGYQMLLHWRPLRDAGHEVLSPRQL 416
HQ GAEPILGDGYQMLL WRPLRDAGHEVL P +L
Sbjct: 183 SHQRGAEPILGDGYQMLLPWRPLRDAGHEVLLPWRL 290
Score = 100 bits (213), Expect(2) = 2e-025
Identities = 44/63 (69%), Positives = 45/63 (71%)
Frame = +2 / -2
Query: 422 PGRKHFMSSVAKGPPVKKHLVSISKNGFSSKLVXXXXXXTDRATVTXXXXXXXXXILVLR 601
PG+KHFMSSVAKGPP KKHLVSISKNGFSS LV TDRATVT ILVLR
Sbjct: 284 PGKKHFMSSVAKGPPGKKHLVSISKNGFSSTLVAAAAAATDRATVTCCSCCSPSSILVLR 105
Query: 602 VMW 610
MW
Sbjct: 104 FMW 96
Score = 65.7 bits (137), Expect(5) = 2e-074
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2 / -2
Query: 308 **GLLLAASEPGGASW*PRFSSVASIWRCCAS 403
**GLLLAASE G ASW*PRFSSV SIWRCCA+
Sbjct: 404 **GLLLAASELGSASW*PRFSSVVSIWRCCAA 309
Score = 63.8 bits (133), Expect(5) = 4e-069
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -1 / +1
Query: 399 AQQRQMLATELNLGYQLAPPGSDAANNNPH 310
AQ RQML TELNLGYQLA P SDAANNNPH
Sbjct: 313 AQHRQMLTTELNLGYQLALPNSDAANNNPH 402
Score = 46.4 bits (95), Expect(3) = 6e-059
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / +2
Query: 437 SAFSPAACSRCWRHSSARCSPPS*TSATNWRRL 339
S+ + C + RHS+ARCSP S*TSATNWR L
Sbjct: 275 SSLAAIRCWKRRRHSTARCSPLS*TSATNWRCL 373
Score = 44.6 bits (91), Expect(3) = 9e-049
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1 / -1
Query: 307 MMRVIVGSVRTRRRQLVAEVQLGGE 381
+MRVIVGSVR R+RQLVAEV L GE
Sbjct: 405 LMRVIVGSVRVRQRQLVAEV*LSGE 331
Score = 43.2 bits (88), Expect(3) = 5e-046
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / +3
Query: 376 HRAEPRLPTGAAWF*RCQQ*PSS 308
H A+PRLPTGAA *RCQQ*PSS
Sbjct: 336 H*AKPRLPTGAA*L*RCQQ*PSS 404
Score = 37.3 bits (75), Expect(2) = 2e-025
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / -3
Query: 309 DEGYCWQRQNQAAPV 353
DEGYCWQRQ+ AAPV
Sbjct: 403 DEGYCWQRQS*AAPV 359
Score = 28.1 bits (55), Expect(5) = 2e-074
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 165 ESHTKGNNNTHRNKL 209
E+HT+ +NNTH NK+
Sbjct: 539 ENHTQVHNNTHHNKV 495
Score = 27.6 bits (54), Expect(5) = 2e-074
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 259 HSSLEKLLVHA 291
HSSLEKLLVHA
Sbjct: 446 HSSLEKLLVHA 414
Score = 26.7 bits (52), Expect(5) = 4e-069
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 289 HVREAFQANC 260
H REAFQANC
Sbjct: 416 HAREAFQANC 445
Score = 25.8 bits (50), Expect(3) = 6e-059
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 290 ACTRSFSSEL 261
ACTRSFSSEL
Sbjct: 415 ACTRSFSSEL 444
Score = 24.9 bits (48), Expect(5) = 2e-074
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 209 RSWKPRTSRG 238
R WKPRT+RG
Sbjct: 499 RLWKPRTARG 470
Score = 24.0 bits (46), Expect(5) = 4e-069
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 235 SRCSWLP*P 209
S CSWLP*P
Sbjct: 473 SSCSWLP*P 499
Score = 24.0 bits (46), Expect(3) = 5e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +3
Query: 288 MYEKLFKRTV 259
M+EKLFKRTV
Sbjct: 417 MHEKLFKRTV 446
Score = 23.1 bits (44), Expect(5) = 4e-069
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1 / +1
Query: 327 ANNNPHHQF*TGC 289
A NN HQF*T C
Sbjct: 382 AANNNPHQF*TAC 420
Score = 23.1 bits (44), Expect(3) = 9e-049
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 258 SQFA*KASRTC 290
+QFA*KASR C
Sbjct: 447 TQFA*KASRAC 415
>gb|BG411765.1|BG411765 OV2_37_G09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 172 bits (370), Expect(6) = 2e-072
Identities = 68/77 (88%), Positives = 70/77 (90%)
Frame = +3 / -2
Query: 423 RGESTSCPASRRGRQ*RSIWYPSPRMGSAPSWWQLLLLQLTVPRSPAAAVALPPQSWS*G 602
+G STSCPASRRGRQ RSIWYPSPRMGSAP WW LLLL+ T PRSPAAAVALPPQSWS*G
Sbjct: 232 QGRSTSCPASRRGRQGRSIWYPSPRMGSAPRWWLLLLLRQTGPRSPAAAVALPPQSWS*G 53
Query: 603 SCGHSEAQSPFWPCN*S 653
SCGHSE QSPFWPCN*S
Sbjct: 52 SCGHSEVQSPFWPCN*S 2
Score = 170 bits (365), Expect(7) = 2e-070
Identities = 70/79 (88%), Positives = 72/79 (91%)
Frame = -2 / +2
Query: 653 RSVTWPKGRLSFRMTT*PSGPRLRRESNSCSR*PWHGQLQQQQLPPTWS*THSWRWIPNA 474
RS+TWPKGRL+FRMTT* SGPRLRRESNSCSR*PW G QQQQ PPTWS*THSWRWIPNA
Sbjct: 2 RSITWPKGRLNFRMTT*TSGPRLRRESNSCSR*PWPGLSQQQQQPPTWS*THSWRWIPNA 181
Query: 473 SSLAAPSRRWT*SAFSPAA 417
SSLAAPSRRWT*SA S AA
Sbjct: 182 SSLAAPSRRWT*SASSLAA 238
Score = 168 bits (361), Expect(4) = 2e-059
Identities = 69/83 (83%), Positives = 72/83 (86%)
Frame = -1 / +1
Query: 654 EISYMAKRETELQNDHMTLRTKIEEGEQQLQQVTVARSVXXXXXATNLELNPFLEMDTKC 475
EI+YMAKRETELQNDHM LRTKIEEGEQQLQQVTVARSV ATN+ELNPFLEMDTKC
Sbjct: 1 EINYMAKRETELQNDHMNLRTKIEEGEQQLQQVTVARSVAAAAAATNVELNPFLEMDTKC 180
Query: 474 FFTGGPFATLDMKCFLPGSLQQM 406
FF GGPFATLDMKCF PG Q +
Sbjct: 181 FFPGGPFATLDMKCFFPGGYQML 249
Score = 136 bits (291), Expect(4) = 2e-048
Identities = 55/76 (72%), Positives = 57/76 (75%)
Frame = +1 / -3
Query: 427 EKALHVQRREGAASEEAFGIHLQEWVQLQVGGSCCCCN*PCHGHXXXXXXXXXXXGPEGH 606
E+ALHVQRREGAA EEAFGIHLQEWVQL VGG CCCC+ P HGH GPE H
Sbjct: 228 EEALHVQRREGAAREEAFGIHLQEWVQLHVGGCCCCCDRPGHGHLLQLLLSLLNLGPEVH 49
Query: 607 VVILKLSLPFGHVTDL 654
VVILK SLPFGHV DL
Sbjct: 48 VVILKFSLPFGHVIDL 1
Score = 122 bits (261), Expect(4) = 9e-043
Identities = 54/79 (68%), Positives = 56/79 (70%)
Frame = -3 / +3
Query: 652 DQLHGQKGD*ASE*PHDPQDQXXXXXXXXXXXXXXTVSCSSSSCHQLGAEPILGDGYQML 473
DQLHGQKGD* SE*PH+PQDQ V SSSS HQ GAEPILGDGYQML
Sbjct: 3 DQLHGQKGD*TSE*PHEPQDQD*GGRATAAAGDRGPVCRSSSSSHQRGAEPILGDGYQML 182
Query: 472 LHWRPLRDAGHEVLSPRQL 416
L WRPLRDAGHEVL P +L
Sbjct: 183 LPWRPLRDAGHEVLLPWRL 239
Score = 100 bits (213), Expect(3) = 9e-033
Identities = 44/63 (69%), Positives = 45/63 (71%)
Frame = +2 / -1
Query: 422 PGRKHFMSSVAKGPPVKKHLVSISKNGFSSKLVXXXXXXTDRATVTXXXXXXXXXILVLR 601
PG+KHFMSSVAKGPP KKHLVSISKNGFSS LV TDRATVT ILVLR
Sbjct: 233 PGKKHFMSSVAKGPPGKKHLVSISKNGFSSTLVAAAAAATDRATVTCCSCCSPSSILVLR 54
Query: 602 VMW 610
MW
Sbjct: 53 FMW 45
Score = 65.7 bits (137), Expect(6) = 2e-072
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2 / -1
Query: 308 **GLLLAASEPGGASW*PRFSSVASIWRCCAS 403
**GLLLAASE G ASW*PRFSSV SIWRCCA+
Sbjct: 353 **GLLLAASELGSASW*PRFSSVVSIWRCCAA 258
Score = 63.8 bits (133), Expect(7) = 2e-070
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -1 / +1
Query: 399 AQQRQMLATELNLGYQLAPPGSDAANNNPH 310
AQ RQML TELNLGYQLA P SDAANNNPH
Sbjct: 262 AQHRQMLTTELNLGYQLALPNSDAANNNPH 351
Score = 52.8 bits (109), Expect(7) = 2e-070
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +3
Query: 144 MEN*T*SIGHNDQMLQIL*GCDQVKAK 64
MEN*T*SI HNDQMLQ L*GCDQVK K
Sbjct: 504 MEN*T*SIRHNDQMLQHL*GCDQVKLK 584
Score = 51.5 bits (106), Expect(4) = 2e-059
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 146 *WRTKPNRLDIMIKCYRSCEAVIRL 72
*WRTKPNRLDIMIKCY EA IRL
Sbjct: 502 *WRTKPNRLDIMIKCYSIYEAAIRL 576
Score = 49.2 bits (101), Expect(6) = 2e-072
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 64 FCLNLITASQDL*HLIIMSNRLGLVLHQ 147
F LNLI AS L*HLIIMSNRLGLVLHQ
Sbjct: 584 F*LNLIAAS*ML*HLIIMSNRLGLVLHQ 501
Score = 47.8 bits (98), Expect(4) = 2e-048
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / -3
Query: 60 LVLP*PDHSLTGSVAFDHYVQSIRFSSPS 146
+ L *PD SL +VAFDHYV SIRFSSPS
Sbjct: 588 MFLT*PDRSLIDAVAFDHYV*SIRFSSPS 502
Score = 46.9 bits (96), Expect(3) = 9e-033
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2 / -2
Query: 65 FALT*SQPHRICSI*SLCPID*V*F 139
F LT*SQPHR CSI*SLC ID*V*F
Sbjct: 583 FNLT*SQPHRCCSI*SLCLID*V*F 509
Score = 46.4 bits (95), Expect(4) = 9e-043
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / +2
Query: 437 SAFSPAACSRCWRHSSARCSPPS*TSATNWRRL 339
S+ + C + RHS+ARCSP S*TSATNWR L
Sbjct: 224 SSLAAIRCWKRRRHSTARCSPLS*TSATNWRCL 322
Score = 44.6 bits (91), Expect(4) = 2e-048
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1 / -3
Query: 307 MMRVIVGSVRTRRRQLVAEVQLGGE 381
+MRVIVGSVR R+RQLVAEV L GE
Sbjct: 354 LMRVIVGSVRVRQRQLVAEV*LSGE 280
Score = 43.2 bits (88), Expect(4) = 2e-059
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / +3
Query: 376 HRAEPRLPTGAAWF*RCQQ*PSS 308
H A+PRLPTGAA *RCQQ*PSS
Sbjct: 285 H*AKPRLPTGAA*L*RCQQ*PSS 353
Score = 39.1 bits (79), Expect(4) = 9e-043
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3 / +2
Query: 145 DGELNLIDWT**SNATDPVRL*SG*GK 65
DGELNLID T**SNAT +RL SG* K
Sbjct: 503 DGELNLID*T**SNATASMRLRSG*VK 583
Score = 37.3 bits (75), Expect(3) = 9e-033
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 309 DEGYCWQRQNQAAPV 353
DEGYCWQRQ+ AAPV
Sbjct: 352 DEGYCWQRQS*AAPV 308
Score = 28.1 bits (55), Expect(6) = 2e-072
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 165 ESHTKGNNNTHRNKL 209
E+HT+ +NNTH NK+
Sbjct: 488 ENHTQVHNNTHHNKV 444
Score = 27.6 bits (54), Expect(6) = 2e-072
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 259 HSSLEKLLVHA 291
HSSLEKLLVHA
Sbjct: 395 HSSLEKLLVHA 363
Score = 26.7 bits (52), Expect(7) = 2e-070
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 289 HVREAFQANC 260
H REAFQANC
Sbjct: 365 HAREAFQANC 394
Score = 25.8 bits (50), Expect(4) = 2e-059
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 290 ACTRSFSSEL 261
ACTRSFSSEL
Sbjct: 364 ACTRSFSSEL 393
Score = 24.9 bits (48), Expect(6) = 2e-072
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 209 RSWKPRTSRG 238
R WKPRT+RG
Sbjct: 448 RLWKPRTARG 419
Score = 24.0 bits (46), Expect(7) = 2e-070
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 235 SRCSWLP*P 209
S CSWLP*P
Sbjct: 422 SSCSWLP*P 448
Score = 24.0 bits (46), Expect(4) = 9e-043
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +3
Query: 288 MYEKLFKRTV 259
M+EKLFKRTV
Sbjct: 366 MHEKLFKRTV 395
Score = 23.1 bits (44), Expect(7) = 2e-070
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1 / +1
Query: 327 ANNNPHHQF*TGC 289
A NN HQF*T C
Sbjct: 331 AANNNPHQF*TAC 369
Score = 23.1 bits (44), Expect(4) = 2e-048
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 258 SQFA*KASRTC 290
+QFA*KASR C
Sbjct: 396 TQFA*KASRAC 364
Score = 21.7 bits (41), Expect(7) = 2e-070
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 262 CERWKLAVA 236
C+ WKLAVA
Sbjct: 394 CDPWKLAVA 420
>gb|BE918286.1|BE918286 OV1_1_E07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 457
Score = 203 bits (437), Expect(3) = 4e-067
Identities = 81/91 (89%), Positives = 83/91 (91%)
Frame = +3 / -3
Query: 423 RGESTSCPASRRGRQ*RSIWYPSPRMGSAPSWWQLLLLQLTVPRSPAAAVALPPQSWS*G 602
+G STSCPASRRGRQ RSIWYPSPRMGSAP WW LLLL+ T PRSPAAAVALPPQSWS*G
Sbjct: 275 QGRSTSCPASRRGRQGRSIWYPSPRMGSAPRWWLLLLLRQTGPRSPAAAVALPPQSWS*G 96
Query: 603 SCGHSEAQSPFWPCN*SPQPAAHSSWP*S*R 695
SCGHSE QSPFWPCN*SPQPAAHSSWP* *R
Sbjct: 95 SCGHSEVQSPFWPCN*SPQPAAHSSWP*P*R 3
Score = 196 bits (423), Expect(3) = 2e-064
Identities = 79/89 (88%), Positives = 82/89 (92%)
Frame = -2 / +3
Query: 683 GPGRVSCWLRRSVTWPKGRLSFRMTT*PSGPRLRRESNSCSR*PWHGQLQQQQLPPTWS* 504
GPGR+SCWLRRS+TWPKGRL+FRMTT* SGPRLRRESNSCSR*PW G QQQQ PPTWS*
Sbjct: 15 GPGRMSCWLRRSITWPKGRLNFRMTT*TSGPRLRRESNSCSR*PWPGLSQQQQQPPTWS* 194
Query: 503 THSWRWIPNASSLAAPSRRWT*SAFSPAA 417
THSWRWIPNASSLAAPSRRWT*SA S AA
Sbjct: 195 THSWRWIPNASSLAAPSRRWT*SASSLAA 281
Score = 194 bits (418), Expect(3) = 2e-057
Identities = 81/97 (83%), Positives = 86/97 (88%)
Frame = -1 / +2
Query: 696 ISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQQLQQVTVARSVXXXXXAT 517
ISK+RARK+ELLAAEI+YMAKRETELQNDHM LRTKIEEGEQQLQQVTVARSV AT
Sbjct: 2 ISKVRARKNELLAAEINYMAKRETELQNDHMNLRTKIEEGEQQLQQVTVARSVAAAAAAT 181
Query: 516 NLELNPFLEMDTKCFFTGGPFATLDMKCFLPGSLQQM 406
N+ELNPFLEMDTKCFF GGPFATLDMKCF PG Q +
Sbjct: 182 NVELNPFLEMDTKCFFPGGPFATLDMKCFFPGGYQML 292
Score = 166 bits (358), Expect(3) = 9e-049
Identities = 68/90 (75%), Positives = 70/90 (77%)
Frame = +1 / -1
Query: 427 EKALHVQRREGAASEEAFGIHLQEWVQLQVGGSCCCCN*PCHGHXXXXXXXXXXXGPEGH 606
E+ALHVQRREGAA EEAFGIHLQEWVQL VGG CCCC+ P HGH GPE H
Sbjct: 271 EEALHVQRREGAAREEAFGIHLQEWVQLHVGGCCCCCDRPGHGHLLQLLLSLLNLGPEVH 92
Query: 607 VVILKLSLPFGHVTDLRSQQLTLPGPDLRD 696
VVILK SLPFGHV DLRSQQL LPGPDLRD
Sbjct: 91 VVILKFSLPFGHVIDLRSQQLILPGPDLRD 2
Score = 153 bits (329), Expect(3) = 1e-045
Identities = 68/94 (72%), Positives = 70/94 (74%)
Frame = -3 / +1
Query: 697 HL*DQGQEE*AAGCGDQLHGQKGD*ASE*PHDPQDQXXXXXXXXXXXXXXTVSCSSSSCH 518
HL* QGQEE*AAGCGDQLHGQKGD* SE*PH+PQDQ V SSSS H
Sbjct: 1 HL*GQGQEE*AAGCGDQLHGQKGD*TSE*PHEPQDQD*GGRATAAAGDRGPVCRSSSSSH 180
Query: 517 QLGAEPILGDGYQMLLHWRPLRDAGHEVLSPRQL 416
Q GAEPILGDGYQMLL WRPLRDAGHEVL P +L
Sbjct: 181 QRGAEPILGDGYQMLLPWRPLRDAGHEVLLPWRL 282
Score = 100 bits (213), Expect(2) = 2e-025
Identities = 44/63 (69%), Positives = 45/63 (71%)
Frame = +2 / -2
Query: 422 PGRKHFMSSVAKGPPVKKHLVSISKNGFSSKLVXXXXXXTDRATVTXXXXXXXXXILVLR 601
PG+KHFMSSVAKGPP KKHLVSISKNGFSS LV TDRATVT ILVLR
Sbjct: 276 PGKKHFMSSVAKGPPGKKHLVSISKNGFSSTLVAAAAAATDRATVTCCSCCSPSSILVLR 97
Query: 602 VMW 610
MW
Sbjct: 96 FMW 88
Score = 65.7 bits (137), Expect(3) = 4e-067
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2 / -2
Query: 308 **GLLLAASEPGGASW*PRFSSVASIWRCCAS 403
**GLLLAASE G ASW*PRFSSV SIWRCCA+
Sbjct: 396 **GLLLAASELGSASW*PRFSSVVSIWRCCAA 301
Score = 63.8 bits (133), Expect(3) = 2e-064
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -1 / +2
Query: 399 AQQRQMLATELNLGYQLAPPGSDAANNNPH 310
AQ RQML TELNLGYQLA P SDAANNNPH
Sbjct: 305 AQHRQMLTTELNLGYQLALPNSDAANNNPH 394
Score = 46.4 bits (95), Expect(3) = 1e-045
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / +3
Query: 437 SAFSPAACSRCWRHSSARCSPPS*TSATNWRRL 339
S+ + C + RHS+ARCSP S*TSATNWR L
Sbjct: 267 SSLAAIRCWKRRRHSTARCSPLS*TSATNWRCL 365
Score = 44.6 bits (91), Expect(3) = 9e-049
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1 / -1
Query: 307 MMRVIVGSVRTRRRQLVAEVQLGGE 381
+MRVIVGSVR R+RQLVAEV L GE
Sbjct: 397 LMRVIVGSVRVRQRQLVAEV*LSGE 323
Score = 43.7 bits (89), Expect(3) = 2e-057
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -3 / +1
Query: 376 HRAEPRLPTGAAWF*RCQQ*PSSSV 302
H A+PRLPTGAA *RCQQ*PSS +
Sbjct: 328 H*AKPRLPTGAA*L*RCQQ*PSSVI 402
Score = 37.3 bits (75), Expect(2) = 2e-025
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / -3
Query: 309 DEGYCWQRQNQAAPV 353
DEGYCWQRQ+ AAPV
Sbjct: 395 DEGYCWQRQS*AAPV 351
Score = 27.6 bits (54), Expect(3) = 4e-067
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 259 HSSLEKLLVHA 291
HSSLEKLLVHA
Sbjct: 438 HSSLEKLLVHA 406
Score = 26.7 bits (52), Expect(3) = 2e-064
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 289 HVREAFQANC 260
H REAFQANC
Sbjct: 408 HAREAFQANC 437
Score = 25.8 bits (50), Expect(3) = 2e-057
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 290 ACTRSFSSEL 261
ACTRSFSSEL
Sbjct: 407 ACTRSFSSEL 436
Score = 24.0 bits (46), Expect(3) = 1e-045
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 288 MYEKLFKRTV 259
M+EKLFKRTV
Sbjct: 409 MHEKLFKRTV 438
Score = 23.1 bits (44), Expect(3) = 9e-049
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 258 SQFA*KASRTC 290
+QFA*KASR C
Sbjct: 439 TQFA*KASRAC 407
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 474
Score = 164 bits (352), Expect(2) = 5e-056
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 72 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 251
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 252 VKSTIERYKKANSDTSNSG 308
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -2
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 287 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 108
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 107 VLDALDLD 84
Score = 76.2 bits (160), Expect(2) = 5e-056
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGI 694
Q YQQES+KLR I LQN NR +VGDS+ +SL++LKQLE RLEKGI
Sbjct: 330 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLEGRLEKGI 473
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 755 ESPTKCLLVFCSIWIWLRSFADSCW* 832
ESPT L FC + I RS DSCW*
Sbjct: 412 ESPTMVLFAFCKLLIVWRSLEDSCW* 335
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 530
Score = 164 bits (352), Expect(2) = 2e-055
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +1
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 130 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 309
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 310 VKSTIERYKKANSDTSNSG 366
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -3
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 345 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 166
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 165 VLDALDLD 142
Score = 74.4 bits (156), Expect(2) = 2e-055
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
Q YQQES+KLR I LQN NR +VGDS+ +SL++LKQLE RLEKG
Sbjct: 388 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLEGRLEKG 528
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 755 ESPTKCLLVFCSIWIWLRSFADSCW* 832
ESPT L FC + I RS DSCW*
Sbjct: 470 ESPTMVLFAFCKLLIVWRSLEDSCW* 393
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 572
Score = 164 bits (352), Expect(2) = 1e-054
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 174 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 353
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 354 VKSTIERYKKANSDTSNSG 410
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 389 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 210
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 209 VLDALDLD 186
Score = 71.6 bits (150), Expect(2) = 1e-054
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
Q YQQES+KLR I LQN NR +VGDS+ +SL++LKQLE LEKG
Sbjct: 432 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLEGXLEKG 572
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 755 ESPTKCLLVFCSIWIWLRSFADSCW* 832
ESPT L FC + I RS DSCW*
Sbjct: 514 ESPTMVLFAFCKLLIVWRSLEDSCW* 437
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 515
Score = 164 bits (352), Expect(2) = 5e-052
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +1
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 130 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 309
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 310 VKSTIERYKKANSDTSNSG 366
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -3
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 345 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 166
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 165 VLDALDLD 142
Score = 62.9 bits (131), Expect(2) = 5e-052
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLE 715
Q YQQES+KLR I LQN NR +VGDS+ +SL++LKQLE
Sbjct: 388 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLE 510
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 755 ESPTKCLLVFCSIWIWLRSFADSCW* 832
ESPT L FC + I RS DSCW*
Sbjct: 470 ESPTMVLFAFCKLLIVWRSLEDSCW* 393
>gb|CW313121.1|CW313121 104_803_11471121_148_35790_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471121, DNA
sequence
Length = 628
Score = 124 bits (266), Expect(7) = 1e-051
Identities = 52/58 (89%), Positives = 52/58 (89%)
Frame = -2 / -1
Query: 590 RLRRESNSCSR*PWHGQLQQQQLPPTWS*THSWRWIPNASSLAAPSRRWT*SAFSPAA 417
RLRRESNSCSR*PW G QQQQ PPTWS*THSWRWIPNASSLAAPSRRWT*SA S AA
Sbjct: 421 RLRRESNSCSR*PWPGLSQQQQQPPTWS*THSWRWIPNASSLAAPSRRWT*SASSLAA 248
Score = 122 bits (260), Expect(4) = 7e-038
Identities = 50/65 (76%), Positives = 53/65 (81%)
Frame = -1 / -3
Query: 600 LRTKIEEGEQQLQQVTVARSVXXXXXATNLELNPFLEMDTKCFFTGGPFATLDMKCFLPG 421
L +IEEGEQQLQQVTVARSV ATN+ELNPFLEMDTKCFF GGPFATLDMKCF PG
Sbjct: 431 LSCQIEEGEQQLQQVTVARSVAAAAAATNVELNPFLEMDTKCFFPGGPFATLDMKCFFPG 252
Query: 420 SLQQM 406
Q +
Sbjct: 251 GYQML 237
Score = 118 bits (252), Expect(6) = 4e-050
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +3 / +2
Query: 423 RGESTSCPASRRGRQ*RSIWYPSPRMGSAPSWWQLLLLQLTVPRSPAAAVALPPQS 590
+G STSCPASRRGRQ RSIWYPSPRMGSAP WW LLLL+ T PRSPAAAVALPPQS
Sbjct: 254 QGRSTSCPASRRGRQGRSIWYPSPRMGSAPRWWLLLLLRQTGPRSPAAAVALPPQS 421
Score = 98.7 bits (209), Expect(4) = 7e-030
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +1 / +3
Query: 427 EKALHVQRREGAASEEAFGIHLQEWVQLQVGGSCCCCN*PCHGH 558
E+ALHVQRREGAA EEAFGIHLQEWVQL VGG CCCC+ P HGH
Sbjct: 258 EEALHVQRREGAAREEAFGIHLQEWVQLHVGGCCCCCDRPGHGH 389
Score = 88.6 bits (187), Expect(2) = 7e-022
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +2 / +1
Query: 422 PGRKHFMSSVAKGPPVKKHLVSISKNGFSSKLVXXXXXXTDRATVT 559
PG+KHFMSSVAKGPP KKHLVSISKNGFSS LV TDRATVT
Sbjct: 253 PGKKHFMSSVAKGPPGKKHLVSISKNGFSSTLVAAAAAATDRATVT 390
Score = 82.2 bits (173), Expect(4) = 5e-026
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -3 / -2
Query: 535 SSSSCHQLGAEPILGDGYQMLLHWRPLRDAGHEVLSPRQL 416
SSSS HQ GAEPILGDGYQMLL WRPLRDAGHEVL P +L
Sbjct: 366 SSSSSHQRGAEPILGDGYQMLLPWRPLRDAGHEVLLPWRL 247
Score = 65.7 bits (137), Expect(6) = 4e-050
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 308 **GLLLAASEPGGASW*PRFSSVASIWRCCAS 403
**GLLLAASE G ASW*PRFSSV SIWRCCA+
Sbjct: 133 **GLLLAASELGSASW*PRFSSVVSIWRCCAA 228
Score = 63.8 bits (133), Expect(7) = 1e-051
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 399 AQQRQMLATELNLGYQLAPPGSDAANNNPH 310
AQ RQML TELNLGYQLA P SDAANNNPH
Sbjct: 224 AQHRQMLTTELNLGYQLALPNSDAANNNPH 135
Score = 46.4 bits (95), Expect(4) = 5e-026
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / -1
Query: 437 SAFSPAACSRCWRHSSARCSPPS*TSATNWRRL 339
S+ + C + RHS+ARCSP S*TSATNWR L
Sbjct: 262 SSLAAIRCWKRRRHSTARCSPLS*TSATNWRCL 164
Score = 44.6 bits (91), Expect(4) = 7e-030
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1 / +3
Query: 307 MMRVIVGSVRTRRRQLVAEVQLGGE 381
+MRVIVGSVR R+RQLVAEV L GE
Sbjct: 132 LMRVIVGSVRVRQRQLVAEV*LSGE 206
Score = 43.2 bits (88), Expect(4) = 7e-038
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 376 HRAEPRLPTGAAWF*RCQQ*PSS 308
H A+PRLPTGAA *RCQQ*PSS
Sbjct: 201 H*AKPRLPTGAA*L*RCQQ*PSS 133
Score = 37.3 bits (75), Expect(2) = 7e-022
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 309 DEGYCWQRQNQAAPV 353
DEGYCWQRQ+ AAPV
Sbjct: 134 DEGYCWQRQS*AAPV 178
Score = 34.1 bits (68), Expect(6) = 4e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 591 WS*GSCGHSEAQSP 632
WS* SCGHSE QSP
Sbjct: 583 WS*SSCGHSEVQSP 624
Score = 34.1 bits (68), Expect(7) = 1e-051
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1 / -1
Query: 633 RETELQNDHMTLRTKI 586
+ETELQNDHM RTK+
Sbjct: 625 QETELQNDHMNFRTKV 578
Score = 29.5 bits (58), Expect(4) = 7e-038
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -2
Query: 629 RLSFRMTT*PSGPR 588
RL+FRMTT* SGPR
Sbjct: 621 RLNFRMTT*TSGPR 580
Score = 27.6 bits (54), Expect(6) = 4e-050
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 259 HSSLEKLLVHA 291
HSSLEKLLVHA
Sbjct: 91 HSSLEKLLVHA 123
Score = 27.2 bits (53), Expect(4) = 5e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -3
Query: 631 GD*ASE*PHDPQDQ 590
GD* SE*PH+ QDQ
Sbjct: 623 GD*TSE*PHELQDQ 582
Score = 26.7 bits (52), Expect(4) = 7e-030
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 592 GPEGHVVILKLSL 630
GPE HVVILK SL
Sbjct: 584 GPEVHVVILKFSL 622
Score = 26.7 bits (52), Expect(7) = 1e-051
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 289 HVREAFQANC 260
H REAFQANC
Sbjct: 121 HAREAFQANC 92
Score = 25.8 bits (50), Expect(4) = 7e-038
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / -3
Query: 290 ACTRSFSSEL 261
ACTRSFSSEL
Sbjct: 122 ACTRSFSSEL 93
Score = 25.8 bits (50), Expect(6) = 4e-050
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 168 SHTKGNNNTHRNKL 209
+HT+ +NNTH NK+
Sbjct: 1 NHTQVHNNTHHNKV 42
Score = 24.9 bits (48), Expect(6) = 4e-050
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 209 RSWKPRTSRG 238
R WKPRT+RG
Sbjct: 38 RLWKPRTARG 67
Score = 24.0 bits (46), Expect(7) = 1e-051
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 235 SRCSWLP*P 209
S CSWLP*P
Sbjct: 64 SSCSWLP*P 38
Score = 24.0 bits (46), Expect(4) = 5e-026
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 288 MYEKLFKRTV 259
M+EKLFKRTV
Sbjct: 120 MHEKLFKRTV 91
Score = 23.1 bits (44), Expect(7) = 1e-051
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1 / -3
Query: 327 ANNNPHHQF*TGC 289
A NN HQF*T C
Sbjct: 155 AANNNPHQF*TAC 117
Score = 23.1 bits (44), Expect(4) = 7e-030
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 258 SQFA*KASRTC 290
+QFA*KASR C
Sbjct: 90 TQFA*KASRAC 122
Score = 21.7 bits (41), Expect(7) = 1e-051
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 262 CERWKLAVA 236
C+ WKLAVA
Sbjct: 92 CDPWKLAVA 66
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 507
Score = 164 bits (352), Expect(2) = 8e-051
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 132 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 311
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 312 VKSTIERYKKANSDTSNSG 368
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -2
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 347 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 168
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 167 VLDALDLD 144
Score = 58.8 bits (122), Expect(2) = 8e-051
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQ 721
Q YQQES+KLR I LQN NR +VGDS+ +SL++LKQ
Sbjct: 390 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQ 506
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 755 ESPTKCLLVFCSIWIWLRSFADSCW* 832
ESPT L FC + I RS DSCW*
Sbjct: 472 ESPTMVLFAFCKLLIVWRSLEDSCW* 395
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 508
Score = 164 bits (352), Expect(2) = 3e-047
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 156 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 335
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 336 VKSTIERYKKANSDTSNSG 392
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -3
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 371 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 192
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 191 VLDALDLD 168
Score = 46.9 bits (96), Expect(2) = 3e-047
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSV 751
Q YQQES+KLR I LQN NR +VGDS+
Sbjct: 414 QHYQQESSKLRQTISSLQNANRTIVGDSI 500
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 755 ESPTKCLLVFCSIWIWLRSFADSCW* 832
ESPT L FC + I RS DSCW*
Sbjct: 496 ESPTMVLFAFCKLLIVWRSLEDSCW* 419
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 164 bits (352), Expect(2) = 2e-043
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 228 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 407
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 408 VKSTIERYKKANSDTSNSG 464
Score = 103 bits (219), Expect(2) = 9e-024
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 443 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 264
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 263 VLDALDLD 240
Score = 34.1 bits (68), Expect(2) = 2e-043
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTN 775
Q YQQES+KLR I LQN N
Sbjct: 486 QHYQQESSKLRQTISSLQNAN 548
Score = 29.0 bits (57), Expect(2) = 9e-024
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 773 LLVFCSIWIWLRSFADSCW* 832
L FC + I RS DSCW*
Sbjct: 550 LFAFCKLLIVWRSLEDSCW* 491
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA, complete
cds
Length = 1055
Score = 118 bits (253), Expect(2) = 2e-041
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
+ +MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+
Sbjct: 37 LGAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 216
Query: 933 AN 928
+
Sbjct: 217 CS 222
Score = 73.0 bits (153), Expect(2) = 2e-041
Identities = 33/103 (32%), Positives = 61/103 (59%)
Frame = -1 / +1
Query: 852 EHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 673
E+ Q + E KL+ ++ LQ T R+L+G+ +G+L +KEL+QLE +L+ + IR+ +
Sbjct: 295 ENELVQSSRNEYLKLKARVDNLQRTQRNLLGEDLGSLGIKELEQLEKQLDSSLRHIRSTR 474
Query: 672 SELLAAEISYMAKRETELQNDHMTLRTKIEEGEQQLQQVTVAR 544
++ + +++ + +RE L + LR K+EE Q+ AR
Sbjct: 475 TQHMLDQLTDLQRREQMLCEANKCLRRKLEETSNQVHSKCGAR 603
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 118 bits (253), Expect(2) = 7e-040
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = -1 / +1
Query: 1107 SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 928
+MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+++
Sbjct: 40 NMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 219
Score = 67.5 bits (141), Expect(2) = 7e-040
Identities = 30/115 (26%), Positives = 63/115 (54%)
Frame = -1 / +1
Query: 933 ANNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDS 754
+ S+ T+E+Y+K G + E+ + + E KL+ ++ LQ T R+L+G+
Sbjct: 217 STQSMPKTLEKYQKCSFAGPETAVQNRENEQLKSSRNEYLKLKARVDNLQRTQRNLLGED 396
Query: 753 VGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLRTK 589
+ +L +KEL+ LE +L+ + IR+ +++ + +++ + KRE + LR +
Sbjct: 397 LESLGIKELEHLEKQLDSSLKHIRSTRTQHMVDQLTELQKREQMFCEANKCLRRR 561
>gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 548
Score = 118 bits (253), Expect(2) = 1e-039
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = -1 / +1
Query: 1107 SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 928
+MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+++
Sbjct: 40 NMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 219
Score = 67.0 bits (140), Expect(2) = 1e-039
Identities = 28/102 (27%), Positives = 59/102 (57%)
Frame = -1 / +1
Query: 933 ANNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDS 754
+ S+ T+E+Y+K G + E+ + + E KL+ ++ LQ T R+L+G+
Sbjct: 217 STQSMPKTLEKYQKCSFAGPETAVQNRENEQLKSSRNEYLKLKARVDNLQRTQRNLLGED 396
Query: 753 VGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRE 628
+ +L +KEL+ LE +L+ + IR+ +++ + +++ + KRE
Sbjct: 397 LESLGIKELEHLEKQLDSSLKHIRSTRTQHMVDQLTELQKRE 522
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 164 bits (353), Expect = 2e-039
Identities = 69/95 (72%), Positives = 81/95 (85%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
G+G+ EIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 291 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 470
Query: 921 VKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQES 817
VKAT+ERYKKA++ SS+ + E Q + Q+ +
Sbjct: 471 VKATIERYKKANSDNSSAAGTIAEVTIQHYKQESA 575
Score = 103 bits (220), Expect = 5e-021
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
VCLLVPLN L VVG+LVEA A EDDE L VAE GELVRLLEE +AALAEG LP
Sbjct: 506 VCLLVPLNGGLHAVVGVLVEAAAAGEDDERDLGVAEHGELVRLLEEAVAALAEGHLPVGR 327
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 326 VLDALDLS 303
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 434
Score = 164 bits (352), Expect = 3e-039
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +1
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 166 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 345
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 346 VKSTIERYKKANSDTSNSG 402
Score = 103 bits (219), Expect = 7e-021
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -3
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 381 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 202
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 201 VLDALDLD 178
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 436
Score = 164 bits (352), Expect = 3e-039
Identities = 69/79 (87%), Positives = 76/79 (96%)
Frame = -1 / +2
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS
Sbjct: 176 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 355
Query: 921 VKATVERYKKAHTVGSSSG 865
VK+T+ERYKKA++ S+SG
Sbjct: 356 VKSTIERYKKANSDTSNSG 412
Score = 103 bits (219), Expect = 7e-021
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V LLVPLN L TVVG+LVEA A EDDE L VAE ELVRLLEE +AALAEGDLP R
Sbjct: 391 VGLLVPLNGGLHTVVGVLVEAAAAGEDDERDLGVAEHRELVRLLEEAVAALAEGDLPVRG 212
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 211 VLDALDLD 188
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 569
Score = 164 bits (352), Expect = 3e-039
Identities = 69/93 (74%), Positives = 80/93 (86%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
G+G+ EIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 288 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 467
Query: 921 VKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQ 823
VKAT+ERYKKA++ SS+ + E Q + Q+
Sbjct: 468 VKATIERYKKANSDNSSAAGTIAEVTIQHYKQE 566
Score = 103 bits (220), Expect = 5e-021
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
VCLLVPLN L VVG+LVEA A EDDE L VAE GELVRLLEE +AALAEG LP
Sbjct: 503 VCLLVPLNGGLHAVVGVLVEAAAAGEDDERDLGVAEHGELVRLLEEAVAALAEGHLPVGR 324
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 323 VLDALDLS 300
>gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_G02_A002 5', mRNA sequence
Length = 758
Score = 116 bits (247), Expect(2) = 5e-039
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = -1 / +3
Query: 1143 EPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIV 964
E RE A MGRG ++++RIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVALIV
Sbjct: 84 ESERERVGVEAAEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIV 263
Query: 963 FSSRGRLYEYANNS 922
FS++G+LYEY+++S
Sbjct: 264 FSTKGKLYEYSSHS 305
Score = 67.5 bits (141), Expect(2) = 5e-039
Identities = 28/91 (30%), Positives = 58/91 (63%)
Frame = -1 / +3
Query: 840 QQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELL 661
Q + E +L++++ LQ + R L+G+ + +L++KEL+QLE +L+ + IR+RK++L+
Sbjct: 384 QANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKNQLM 563
Query: 660 AAEISYMAKRETELQNDHMTLRTKIEEGEQQ 568
IS + K+E L + + L+ +E +++
Sbjct: 564 FDSISELQKKEKALTDQNGVLQKLMEAEKEK 656
>gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 288
Score = 162 bits (348), Expect = 1e-038
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = -1 / +2
Query: 1134 REEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 955
+ E+ ++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS
Sbjct: 56 QREEQAAISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 235
Query: 954 RGRLYEYANNSVKATVE 904
RGRLYEYANNSVKAT+E
Sbjct: 236 RGRLYEYANNSVKATIE 286
Score = 136 bits (291), Expect = 8e-031
Identities = 58/70 (82%), Positives = 61/70 (87%)
Frame = +1 / -3
Query: 904 LNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLD 1083
LN SL VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLD
Sbjct: 286 LNRSLHAVVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLD 107
Query: 1084 LNPSSTHAGD 1113
LNPS HAGD
Sbjct: 106 LNPSPPHAGD 77
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial cds
Length = 1186
Score = 103 bits (220), Expect(2) = 2e-038
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = -1 / +3
Query: 1092 RIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
++++KRIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA +S
Sbjct: 3 KVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYATDS 173
Score = 78.0 bits (164), Expect(2) = 2e-038
Identities = 33/94 (35%), Positives = 61/94 (64%)
Frame = -1 / +3
Query: 852 EHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 673
E ++ + E KL+ +I+ +Q ++HL+G+ + +L+ KEL+QLE +LE + IR+RK
Sbjct: 240 ESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNPKELQQLEQQLESSLKHIRSRK 419
Query: 672 SELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
S L+A IS + K+E LQ ++ L+ ++ E ++
Sbjct: 420 SHLMAESISELQKKERSLQEENKALQKELAERQK 521
>gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_2_G04_A012 5', mRNA sequence
Length = 676
Score = 116 bits (247), Expect(2) = 2e-038
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = -1 / +1
Query: 1143 EPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIV 964
E RE A MGRG ++++RIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVALIV
Sbjct: 124 ESERERVGVEAAEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIV 303
Query: 963 FSSRGRLYEYANNS 922
FS++G+LYEY+++S
Sbjct: 304 FSTKGKLYEYSSHS 345
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 27/82 (32%), Positives = 53/82 (64%)
Frame = -1 / +1
Query: 840 QQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELL 661
Q + E +L++++ LQ + R L+G+ + +L++KEL+QLE +L+ + IR+RK++L+
Sbjct: 424 QANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKNQLM 603
Query: 660 AAEISYMAKRETELQNDHMTLR 595
IS + K+E L + + L+
Sbjct: 604 FDSISELQKKEKALTDQNGVLQ 669
>gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_10_G05_A002 5', mRNA sequence
Length = 654
Score = 116 bits (247), Expect(2) = 3e-038
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = -1 / +2
Query: 1143 EPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIV 964
E RE A MGRG ++++RIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVALIV
Sbjct: 113 ESERERVGVEAAEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIV 292
Query: 963 FSSRGRLYEYANNS 922
FS++G+LYEY+++S
Sbjct: 293 FSTKGKLYEYSSHS 334
Score = 64.8 bits (135), Expect(2) = 3e-038
Identities = 26/78 (33%), Positives = 51/78 (65%)
Frame = -1 / +2
Query: 840 QQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELL 661
Q + E +L++++ LQ + R L+G+ + +L++KEL+QLE +L+ + IR+RK++L+
Sbjct: 413 QANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKNQLM 592
Query: 660 AAEISYMAKRETELQNDH 607
IS + K+E L + +
Sbjct: 593 FDSISELQKKEKALTDQN 646
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 540
Score = 160 bits (343), Expect = 5e-038
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
G+G+ EIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 288 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 467
Query: 921 VKATVERYKKAHTVGSSSGPPLLE 850
VKAT+ERYKKA++ SS+ + E
Sbjct: 468 VKATIERYKKANSDNSSAAGTIAE 539
Score = 103 bits (220), Expect = 5e-021
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1 / -2
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
VCLLVPLN L VVG+LVEA A EDDE L VAE GELVRLLEE +AALAEG LP
Sbjct: 503 VCLLVPLNGGLHAVVGVLVEAAAAGEDDERDLGVAEHGELVRLLEEAVAALAEGHLPVGR 324
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 323 VLDALDLS 300
>gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 295
Score = 158 bits (340), Expect = 1e-037
Identities = 67/75 (89%), Positives = 71/75 (94%)
Frame = -1 / +3
Query: 1134 REEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 955
+ E+ ++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS
Sbjct: 69 QREEQAAISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 248
Query: 954 RGRLYEYANNSVKAT 910
RGRLYEYANNSVKAT
Sbjct: 249 RGRLYEYANNSVKAT 293
Score = 132 bits (282), Expect = 1e-029
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1 / -3
Query: 913 SLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNP 1092
SL VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLDLNP
Sbjct: 290 SLHAVVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLDLNP 111
Query: 1093 SSTHAGD 1113
S HAGD
Sbjct: 110 SPPHAGD 90
>gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 158 bits (340), Expect = 1e-037
Identities = 66/78 (84%), Positives = 74/78 (94%)
Frame = -1 / +2
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
G+G+ EIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 293 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 472
Query: 921 VKATVERYKKAHTVGSSS 868
VKAT+ERYKKA++ SS+
Sbjct: 473 VKATIERYKKANSDNSSA 526
Score = 103 bits (220), Expect = 5e-021
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
VCLLVPLN L VVG+LVEA A EDDE L VAE GELVRLLEE +AALAEG LP
Sbjct: 508 VCLLVPLNGGLHAVVGVLVEAAAAGEDDERDLGVAEHGELVRLLEEAVAALAEGHLPVGR 329
Query: 1066 VLDPLDLN 1089
VLD LDL+
Sbjct: 328 VLDALDLS 305
>gb|AY827471.1| Sorghum bicolor MADS box transcription factor mRNA, partial cds
Length = 829
Score = 107 bits (229), Expect(2) = 2e-037
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = -1 / +1
Query: 1086 EIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATV 907
E++RIEN SRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRGRL+E++ +S
Sbjct: 1 EMRRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGRLFEFSTSSCTYKT 180
Query: 906 ERYKKAHTVGSSSGPPL 856
++ S + PL
Sbjct: 181 LERYRSCNFASEASAPL 231
Score = 70.7 bits (148), Expect(2) = 2e-037
Identities = 29/86 (33%), Positives = 57/86 (66%)
Frame = -1 / +1
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
QE KL+ +++ LQ T R+L+G+ +G L++KEL+QLE+++E + IR+ K+ + ++
Sbjct: 253 QEYLKLKTKVEFLQTTQRNLLGEDLGPLNVKELEQLENQIEISLKHIRSSKNRQMLDQLF 432
Query: 645 YMAKRETELQNDHMTLRTKIEEGEQQ 568
+ ++E +LQ+ + LR K E ++
Sbjct: 433 DLKRKEQQLQDANKDLRRKGPETSEE 510
>gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) mRNA, partial cds
Length = 669
Score = 97.3 bits (206), Expect(2) = 4e-037
Identities = 39/51 (76%), Positives = 47/51 (92%)
Frame = -1 / +1
Query: 1074 IENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 922
IEN SRQVTF KRRNGLLKKAYELS++CDAEVALI+FS RGRL+E++++S
Sbjct: 1 IENKISRQVTFAKRRNGLLKKAYELSLMCDAEVALIIFSGRGRLFEFSSSS 153
Score = 79.9 bits (168), Expect(2) = 4e-037
Identities = 31/82 (37%), Positives = 60/82 (73%)
Frame = -1 / +1
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
Q+ KLR +++ LQ T R+++G+ +G LS+KEL+QLE+++E + +IR+R++++L ++
Sbjct: 241 QDYLKLRTRVEFLQTTQRNILGEVLGPLSMKELEQLENQIETSLKQIRSRENQMLLDQLF 420
Query: 645 YMAKRETELQNDHMTLRTKIEE 580
+ +E ELQ+ + LR K++E
Sbjct: 421 DLKSKEQELQDLNKDLRKKLQE 486
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 407
Score = 129 bits (276), Expect(2) = 1e-035
Identities = 52/70 (74%), Positives = 62/70 (88%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 45 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 224
Query: 924 SVKATVERYK 895
+ T+ERY+
Sbjct: 225 GITKTLERYQ 254
Score = 42.8 bits (87), Expect(2) = 1e-035
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLK 733
Q + QE +KLR + + LQ T RHL+G+ +G LS+K
Sbjct: 303 QSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVK 407
>gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_41_H12_A002 5', mRNA sequence
Length = 768
Score = 109 bits (232), Expect(2) = 3e-035
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1 / +1
Query: 1098 RGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 928
RGR E++RIE++TSRQVTF KRR+GLLKKAYELSVLCDAEVALIVFS RGRLY++A+
Sbjct: 217 RGRREMRRIEDSTSRQVTFSKRRSGLLKKAYELSVLCDAEVALIVFSPRGRLYQFAS 387
Score = 61.6 bits (128), Expect(2) = 3e-035
Identities = 27/79 (34%), Positives = 51/79 (64%)
Frame = -1 / +1
Query: 831 YQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAE 652
++ E+ L +I ++ R L+G+++G+ S++ELK+LE++LEK +S IR RK L +
Sbjct: 478 WKYEATTLGKKIDAIETYKRKLLGENLGSCSVQELKELEAQLEKSLSIIRQRKERKLMDQ 657
Query: 651 ISYMAKRETELQNDHMTLR 595
I + ++E +L ++ LR
Sbjct: 658 ILELREKEQKLLMENAMLR 714
>gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809866, DNA
sequence
Length = 713
Score = 145 bits (312), Expect = 1e-033
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1 / -1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY
Sbjct: 590 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 411
Query: 933 ANN 925
ANN
Sbjct: 410 ANN 402
Score = 128 bits (275), Expect = 1e-028
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1 / +3
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLDLNPS H
Sbjct: 402 VVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLDLNPSPPH 581
Query: 1105 AGD 1113
AGD
Sbjct: 582 AGD 590
>gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524173, DNA
sequence
Length = 470
Score = 145 bits (312), Expect = 1e-033
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1 / -1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY
Sbjct: 338 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 159
Query: 933 ANN 925
ANN
Sbjct: 158 ANN 150
Score = 128 bits (275), Expect = 1e-028
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1 / +3
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLDLNPS H
Sbjct: 150 VVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLDLNPSPPH 329
Query: 1105 AGD 1113
AGD
Sbjct: 330 AGD 338
>gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104678, DNA
sequence
Length = 621
Score = 145 bits (312), Expect = 1e-033
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1 / -1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY
Sbjct: 459 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 280
Query: 933 ANN 925
ANN
Sbjct: 279 ANN 271
Score = 128 bits (275), Expect = 1e-028
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1 / +1
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLDLNPS H
Sbjct: 271 VVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLDLNPSPPH 450
Query: 1105 AGD 1113
AGD
Sbjct: 451 AGD 459
>gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113875, DNA
sequence
Length = 660
Score = 145 bits (312), Expect = 1e-033
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1 / -1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY
Sbjct: 615 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 436
Query: 933 ANN 925
ANN
Sbjct: 435 ANN 427
Score = 128 bits (275), Expect = 1e-028
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1 / +1
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLDLNPS H
Sbjct: 427 VVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLDLNPSPPH 606
Query: 1105 AGD 1113
AGD
Sbjct: 607 AGD 615
>gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404091, DNA
sequence
Length = 618
Score = 145 bits (312), Expect = 1e-033
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1 / -1
Query: 1113 VASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 934
++SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY
Sbjct: 588 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 409
Query: 933 ANN 925
ANN
Sbjct: 408 ANN 400
Score = 128 bits (275), Expect = 1e-028
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1 / +1
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+LVEA A EDDEGHL VA+DGELVRLLEEP+AALAEGDLPARVVLDPLDLNPS H
Sbjct: 400 VVGVLVEAAAAGEDDEGHLGVAQDGELVRLLEEPVAALAEGDLPARVVLDPLDLNPSPPH 579
Query: 1105 AGD 1113
AGD
Sbjct: 580 AGD 588
>gb|BG054220.1|BG054220 OV2_3_G05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 389
Score = 65.7 bits (137), Expect(6) = 2e-030
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2 / -1
Query: 308 **GLLLAASEPGGASW*PRFSSVASIWRCCAS 403
**GLLLAASE G ASW*PRFSSV SIWRCCA+
Sbjct: 155 **GLLLAASELGSASW*PRFSSVVSIWRCCAA 60
Score = 63.8 bits (133), Expect(7) = 1e-032
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -1 / +1
Query: 399 AQQRQMLATELNLGYQLAPPGSDAANNNPH 310
AQ RQML TELNLGYQLA P SDAANNNPH
Sbjct: 64 AQHRQMLTTELNLGYQLALPNSDAANNNPH 153
Score = 52.8 bits (109), Expect(7) = 1e-032
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +3
Query: 144 MEN*T*SIGHNDQMLQIL*GCDQVKAK 64
MEN*T*SI HNDQMLQ L*GCDQVK K
Sbjct: 306 MEN*T*SIRHNDQMLQHL*GCDQVKLK 386
Score = 49.2 bits (101), Expect(6) = 2e-030
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 64 FCLNLITASQDL*HLIIMSNRLGLVLHQ 147
F LNLI AS L*HLIIMSNRLGLVLHQ
Sbjct: 386 F*LNLIAAS*ML*HLIIMSNRLGLVLHQ 303
Score = 34.5 bits (69), Expect(7) = 1e-032
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 456 FATLDMKCFLPGSLQQM 406
FATLDMKCF PG Q +
Sbjct: 1 FATLDMKCFFPGGYQML 51
Score = 28.1 bits (55), Expect(6) = 2e-030
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 422 PGRKHFMSSVA 454
PG+KHFMSSVA
Sbjct: 35 PGKKHFMSSVA 3
Score = 28.1 bits (55), Expect(6) = 2e-030
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 165 ESHTKGNNNTHRNKL 209
E+HT+ +NNTH NK+
Sbjct: 290 ENHTQVHNNTHHNKV 246
Score = 27.6 bits (54), Expect(6) = 2e-030
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 259 HSSLEKLLVHA 291
HSSLEKLLVHA
Sbjct: 197 HSSLEKLLVHA 165
Score = 26.7 bits (52), Expect(7) = 1e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 289 HVREAFQANC 260
H REAFQANC
Sbjct: 167 HAREAFQANC 196
Score = 24.9 bits (48), Expect(6) = 2e-030
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 209 RSWKPRTSRG 238
R WKPRT+RG
Sbjct: 250 RLWKPRTARG 221
Score = 24.0 bits (46), Expect(7) = 1e-032
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 235 SRCSWLP*P 209
S CSWLP*P
Sbjct: 224 SSCSWLP*P 250
Score = 23.1 bits (44), Expect(7) = 1e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1 / +1
Query: 327 ANNNPHHQF*TGC 289
A NN HQF*T C
Sbjct: 133 AANNNPHQF*TAC 171
Score = 21.7 bits (41), Expect(7) = 1e-032
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 262 CERWKLAVA 236
C+ WKLAVA
Sbjct: 196 CDPWKLAVA 222
>gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 435
Score = 119 bits (254), Expect(2) = 2e-032
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = -1 / +1
Query: 1149 LQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVAL 970
L+ R+ + MGRG++E+KRIEN SRQVTF KRRNGLLKKAYELS+LCDAEVAL
Sbjct: 19 LEREKRDAKQAR*EDMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVAL 198
Query: 969 IVFSSRGRLYEYANNS 922
I+FS RGRL+E++++S
Sbjct: 199 IIFSGRGRLFEFSSSS 246
Score = 42.3 bits (86), Expect(2) = 2e-032
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = -1 / +1
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELK 724
Q+ KLR +++ LQ T R+++G+ +G LS+KEL+
Sbjct: 334 QDYLKLRTRVEFLQTTQRNILGEDLGXLSMKELE 435
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 134 bits (287), Expect = 3e-030
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -1 / -3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
Sbjct: 613 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 437
>gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 605
Score = 134 bits (287), Expect = 3e-030
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
Sbjct: 351 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 527
>gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 620
Score = 134 bits (287), Expect = 3e-030
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -1 / -1
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
Sbjct: 323 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 147
>gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 611
Score = 134 bits (287), Expect = 3e-030
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -1 / -2
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
Sbjct: 466 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 290
>gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 654
Score = 134 bits (287), Expect = 3e-030
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -1 / +2
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
GRG+IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
Sbjct: 335 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 511
>gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f048c08, DNA
sequence
Length = 627
Score = 132 bits (283), Expect = 1e-029
Identities = 52/60 (86%), Positives = 59/60 (98%)
Frame = -1 / -2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN TSRQVTFCKRRNGLLKKAYELS+LCDAE+AL++FSSRGRLYEY++N
Sbjct: 422 MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIALVIFSSRGRLYEYSSN 243
>gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275c14, DNA
sequence
Length = 668
Score = 132 bits (283), Expect = 1e-029
Identities = 52/60 (86%), Positives = 59/60 (98%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN TSRQVTFCKRRNGLLKKAYELS+LCDAE+AL++FSSRGRLYEY++N
Sbjct: 170 MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIALVIFSSRGRLYEYSSN 349
>gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f298p16, DNA
sequence
Length = 730
Score = 130 bits (279), Expect = 4e-029
Identities = 51/60 (85%), Positives = 58/60 (96%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN TSRQVTFCKRRNGLLKK YELS+LCDAE+AL++FSSRGRLYEY++N
Sbjct: 55 MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKGYELSILCDAEIALVIFSSRGRLYEYSSN 234
>gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226403, DNA
sequence
Length = 572
Score = 129 bits (276), Expect = 9e-029
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -1 / +3
Query: 1101 GRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
G+G+ EIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 108 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 284
>gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 126 bits (269), Expect = 9e-028
Identities = 51/72 (70%), Positives = 64/72 (88%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+I I+RI+N+TSRQVTF KRRNGLLKKA ELS+LCDAEV LI+FSS GRLYE+++
Sbjct: 97 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGRLYEFSST 276
Query: 924 SVKATVERYKKA 889
++KA ++RY KA
Sbjct: 277 NMKAVIDRYGKA 312
>gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 499
Score = 126 bits (269), Expect = 9e-028
Identities = 51/72 (70%), Positives = 64/72 (88%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+I I+RI+N+TSRQVTF KRRNGLLKKA ELS+LCDAEV LI+FSS GRLYE+++
Sbjct: 159 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGRLYEFSST 338
Query: 924 SVKATVERYKKA 889
++KA ++RY KA
Sbjct: 339 NMKAVIDRYGKA 374
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,468,123,459
Number of Sequences: 832831
Number of extensions: 23754994
Number of successful extensions: 175934
Number of sequences better than 1.0e-020: 113
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 41411278701
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)