TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9196052.2.1
(771 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE356845.1|BE356845 DG1_145_G02.b1_A002 Dark Grown 1 (DG... 151 1e-035
gb|BE356942.1|BE356942 DG1_145_G02.g1_A002 Dark Grown 1 (DG... 151 1e-035
gb|CW465791.1|CW465791 fsbb001f216l12k0 Sorghum methylation... 115 1e-030
gb|CW274970.1|CW274970 104_748_11404711_116_35378_030 Sorgh... 115 1e-030
gb|CW222860.1|CW222860 104_658_11202600_148_37179_088 Sorgh... 122 8e-028
gb|CW432487.1|CW432487 fsbb001f147d15k0 Sorghum methylation... 122 5e-027
gb|CW057154.1|CW057154 104_299_10518068_115_30171 Sorghum m... 122 5e-027
gb|CW092755.1|CW092755 104_455_10999359_114_33045_056 Sorgh... 122 6e-027
gb|CW434401.1|CW434401 fsbb001f150b10f0 Sorghum methylation... 122 6e-027
gb|BZ367148.1|BZ367148 id02f11.b1 WGS-SbicolorF (JM107 adap... 122 6e-027
gb|CW360357.1|CW360357 fsbb001f028g13k0 Sorghum methylation... 122 6e-027
gb|CW277504.1|CW277504 104_751_11406063_148_35413_054 Sorgh... 115 1e-024
gb|CW281385.1|CW281385 104_757_11408148_148_35460_048 Sorgh... 115 1e-024
gb|CW295944.1|CW295944 104_777_11461223_148_35624_088 Sorgh... 115 1e-024
gb|AW677456.1|AW677456 DG1_7_A12.b1_A002 Dark Grown 1 (DG1)... 115 1e-024
gb|CL173039.1|CL173039 104_376_10890604_116_31795_124 Sorgh... 102 7e-024
gb|CW477234.1|CW477234 fsbb001f234h16k0 Sorghum methylation... 57 4e-022
gb|CW453023.1|CW453023 fsbb001f193n14f0 Sorghum methylation... 102 4e-021
gb|CW099509.1|CW099509 104_466_11003588_148_34377_072 Sorgh... 102 5e-021
gb|CX611827.1|CX611827 ANR1_27_A06.b1_A002 Anaerobic roots ... 95 2e-018
gb|CX611914.1|CX611914 ANR1_27_A06.g1_A002 Anaerobic roots ... 95 2e-018
gb|CL162553.1|CL162553 104_355_10806495_116_31833_015 Sorgh... 91 7e-018
gb|CW144697.1|CW144697 104_537_11138079_116_34972_064 Sorgh... 92 1e-017
gb|CL187967.1|CL187967 104_404_10901266_114_32445_047 Sorgh... 79 6e-014
gb|CW200417.1|CW200417 104_626_11184054_116_36868_031 Sorgh... 79 6e-014
gb|CW259755.1|CW259755 104_726_11228601_148_35186_043 Sorgh... 79 6e-014
gb|BZ368192.1|BZ368192 id11h08.b1 WGS-SbicolorF (JM107 adap... 73 7e-012
gb|CW050175.1|CW050175 104_289_10514492_114_30202 Sorghum m... 73 7e-012
gb|CW093354.1|CW093354 104_456_10999729_114_33065_007 Sorgh... 73 7e-012
gb|CW124534.1|CW124534 104_504_11111834_116_34708_009 Sorgh... 73 7e-012
gb|CW230886.1|CW230886 104_680_11210834_116_37342_015 Sorgh... 73 7e-012
gb|CW416466.1|CW416466 fsbb001f117a09f0 Sorghum methylation... 73 7e-012
gb|CN126308.1|CN126308 RHOH1_16_H09.b1_A002 Acid- and alkal... 73 7e-012
gb|CW106693.1|CW106693 104_476_11096128_116_34467_056 Sorgh... 51 1e-011
gb|CW360356.1|CW360356 fsbb001f028g13f0 Sorghum methylation... 51 1e-011
gb|CW106694.1|CW106694 104_476_11096128_148_34463_056 Sorgh... 51 1e-011
gb|CW334849.1|CW334849 104_833_11482718_148_36072_055 Sorgh... 71 2e-011
gb|BF420938.1|BF420938 FM1_5_B10.g1_A003 Floral-Induced Mer... 71 2e-011
gb|CW110509.1|CW110509 104_483_11103751_148_34521_026 Sorgh... 70 3e-011
gb|CW495938.1|CW495938 fsbb001f287o20f0 Sorghum methylation... 59 5e-011
gb|BZ693575.1|BZ693575 SP__Ba0036F01.r SP__Ba Sorghum propi... 69 9e-011
gb|CW787576.1|CW787576 SP__Ba0036F01.r SP__Ba Sorghum propi... 69 9e-011
gb|CW259754.1|CW259754 104_726_11228601_116_35190_043 Sorgh... 68 1e-010
gb|CL197378.1|CL197378 104_424_10943705_116_32339_075 Sorgh... 52 4e-009
gb|CW295943.1|CW295943 104_777_11461223_116_35620_088 Sorgh... 41 9e-009
gb|CL192385.1|CL192385 104_415_10940198_114_32259_061 Sorgh... 49 2e-008
gb|CL176773.1|CL176773 104_383_10893351_116_31773_183 Sorgh... 61 3e-008
gb|CL192386.1|CL192386 104_415_10940198_116_32263_061 Sorgh... 50 1e-005
gb|CL157482.1|CL157482 104_345_10783607_114_31477_167 Sorgh... 50 5e-005
gb|CW028774.1|CW028774 104_256_10499295_114_30399 Sorghum m... 48 2e-004
gb|CW276142.1|CW276142 104_749_11405332_116_35387_004 Sorgh... 46 0.001
gb|CW195800.1|CW195800 104_619_11180827_148_36803_072 Sorgh... 38 0.008
gb|CW063461.1|CW063461 104_309_10522019_115_30140 Sorghum m... 41 0.017
gb|CW281384.1|CW281384 104_757_11408148_116_35464_048 Sorgh... 41 0.017
gb|CW465790.1|CW465790 fsbb001f216l12f0 Sorghum methylation... 41 0.017
gb|CW277503.1|CW277503 104_751_11406063_116_35409_054 Sorgh... 40 0.059
gb|CW273791.1|CW273791 104_746_11404089_148_35366_039 Sorgh... 36 0.75
gb|CW139640.1|CW139640 104_529_11135348_148_34909_066 Sorgh... 35 1.0
gb|BG412901.1|BG412901 OV2_36_C10.b1_A002 Ovary 2 (OV2) Sor... 35 1.1
gb|CF483618.1|CF483618 POL1_23_C04.g1_A002 Pollen Sorghum b... 35 1.1
gb|CL152152.1|CL152152 104_335_10779758_116_31364_158 Sorgh... 35 1.4
gb|CW152083.1|CW152083 104_553_11144300_116_36325_078 Sorgh... 35 1.4
gb|CW152084.1|CW152084 104_553_11144300_148_36330_078 Sorgh... 35 1.4
gb|BI074600.1|BI074600 IP1_13_E08.b1_A002 Immature pannicle... 35 1.4
gb|BM322460.1|BM322460 PIC1_5_B02.b1_A002 Pathogen-infected... 35 1.4
gb|CD427405.1|CD427405 SA1_30_A11.b1_A002 Salicylic acid-tr... 27 1.7
gb|CW238112.1|CW238112 104_694_11216546_148_37399_001 Sorgh... 27 1.7
gb|CW512267.1|CW512267 115_1_10510376_1_30023 Sorghum unfil... 35 2.0
gb|CW381708.1|CW381708 fsbb001f063d24k0 Sorghum methylation... 35 2.0
gb|CD235229.1|CD235229 SS1_28_G10.b1_A012 Salt-stressed see... 35 2.0
gb|CD431936.1|CD431936 ETH1_12_B04.b1_A002 Ethylene-treated... 35 2.0
gb|CW027451.1|CW027451 104_254_10498523_114_30395 Sorghum m... 34 2.7
gb|CW027452.1|CW027452 104_254_10498523_116_30396 Sorghum m... 34 2.7
gb|CW330416.1|CW330416 104_827_11480363_116_36011_042 Sorgh... 34 2.7
gb|CW330417.1|CW330417 104_827_11480363_148_36012_042 Sorgh... 34 2.7
gb|CL176863.1|CL176863 104_383_10893418_116_31773_250 Sorgh... 34 3.7
gb|CW319756.1|CW319756 104_812_11474654_116_35887_055 Sorgh... 34 3.7
gb|CW319757.1|CW319757 104_812_11474654_148_35891_055 Sorgh... 34 3.7
gb|CN126733.1|CN126733 RHOH1_18_H01.g1_A002 Acid- and alkal... 34 3.7
gb|CW456009.1|CW456009 fsbb001f201c14f0 Sorghum methylation... 28 3.9
gb|CW128919.1|CW128919 104_510_11114278_148_34753_083 Sorgh... 28 4.0
gb|CW246498.1|CW246498 104_707_11221364_148_35087_074 Sorgh... 28 4.1
gb|CW103181.1|CW103181 104_471_11011743_116_34426_052 Sorgh... 28 4.2
gb|CL150158.1|CL150158 104_331_10778319_116_31356_255 Sorgh... 33 5.1
gb|CL154900.1|CL154900 104_340_10781728_114_31469_208 Sorgh... 33 5.1
gb|CL154901.1|CL154901 104_340_10781728_116_31470_208 Sorgh... 33 5.1
gb|CW091769.1|CW091769 104_453_10998757_116_33034_049 Sorgh... 33 5.1
gb|CW160965.1|CW160965 104_567_11150160_116_36419_086 Sorgh... 33 5.1
gb|CW176043.1|CW176043 104_588_11158277_116_36574_017 Sorgh... 33 5.1
gb|CW332743.1|CW332743 104_830_11481577_116_36040_007 Sorgh... 33 5.1
gb|CW332744.1|CW332744 104_830_11481577_148_36039_007 Sorgh... 33 5.1
gb|CW353710.1|CW353710 fsbb001f016j07f0 Sorghum methylation... 33 5.1
gb|CW360689.1|CW360689 fsbb001f028o10f0 Sorghum methylation... 33 5.1
gb|CW364396.1|CW364396 fsbb001f036g18f0 Sorghum methylation... 33 5.1
gb|CW364397.1|CW364397 fsbb001f036g18k0 Sorghum methylation... 33 5.1
gb|CW432989.1|CW432989 fsbb001f148a06k0 Sorghum methylation... 33 5.1
gb|CW483697.1|CW483697 fsbb001f245h08k0 Sorghum methylation... 33 5.1
gb|CW500115.1|CW500115 fsbb001f295e04f0 Sorghum methylation... 33 5.1
gb|CD219779.1|CD219779 CCC1_58_C06.g1_A007 Callus culture/c... 33 5.1
gb|CD220660.1|CD220660 CCC1_68_C01.g1_A007 Callus culture/c... 33 5.1
gb|CD223225.1|CD223225 CCC1_26_A10.g1_A007 Callus culture/c... 33 5.1
gb|CD225197.1|CD225197 CCC1_38_H07.g1_A007 Callus culture/c... 33 5.1
gb|CD226597.1|CD226597 CCC1_46_C09.g1_A007 Callus culture/c... 33 5.1
gb|CD226613.1|CD226613 CCC1_46_B09.g1_A007 Callus culture/c... 33 5.1
gb|CN139694.1|CN139694 OX1_23_C05.g1_A002 Oxidatively-stres... 33 5.1
gb|CX613217.1|CX613217 GABR1_7_A02.b1_A002 GA- or brassinol... 33 5.1
gb|CX614893.1|CX614893 GABR1_17_A10.b1_A002 GA- or brassino... 33 5.1
gb|CW041311.1|CW041311 104_274_10506490_114_30470 Sorghum m... 24 6.5
gb|CW238453.1|CW238453 104_695_11216739_116_37527_010 Sorgh... 27 6.7
gb|CL156607.1|CL156607 104_343_10782982_116_31476_310 Sorgh... 33 7.0
gb|CW218599.1|CW218599 104_652_11196275_116_37460_044 Sorgh... 33 7.0
gb|CW490730.1|CW490730 fsbb001f280e20f0 Sorghum methylation... 33 7.0
gb|CW490731.1|CW490731 fsbb001f280e20k0 Sorghum methylation... 33 7.0
gb|CW269200.1|CW269200 104_740_11401724_148_36232_076 Sorgh... 33 7.2
gb|CW419528.1|CW419528 fsbb001f124g17f0 Sorghum methylation... 33 7.2
gb|CW284984.1|CW284984 104_762_11410090_116_35502_045 Sorgh... 26 7.7
gb|CF072731.1|CF072731 FE1_25_E05.g1_A002 Iron-deficient se... 26 7.7
gb|BZ348633.1|BZ348633 hp59e04.g2 WGS-SbicolorF (JM107 adap... 26 7.7
gb|BZ336712.1|BZ336712 hz38f11.g1 WGS-SbicolorF (JM107 adap... 32 9.6
gb|BZ339171.1|BZ339171 ic30d01.g1 WGS-SbicolorF (JM107 adap... 32 9.6
gb|CW028566.1|CW028566 104_255_10499170_116_30393 Sorghum m... 32 9.6
gb|CW119057.1|CW119057 104_495_11108545_116_34624_001 Sorgh... 32 9.6
gb|CW173352.1|CW173352 104_585_11156797_116_36549_063 Sorgh... 32 9.6
gb|CW207211.1|CW207211 104_636_11188004_116_36976_076 Sorgh... 32 9.6
gb|CW215093.1|CW215093 104_647_11194362_116_37464_075 Sorgh... 32 9.6
gb|CW323012.1|CW323012 104_817_11476408_116_35962_064 Sorgh... 32 9.6
gb|CW389345.1|CW389345 fsbb001f074h23k0 Sorghum methylation... 32 9.6
gb|CB925715.1|CB925715 ABA1_23_A12.b1_A012 Abscisic acid-tr... 32 9.6
gb|CD427836.1|CD427836 ETH1_34_H07.g1_A002 Ethylene-treated... 32 9.6
gb|CF428717.1|CF428717 PH1_17_A11.b1_A002 Phosphorous-defic... 32 9.6
>gb|BE356845.1|BE356845 DG1_145_G02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 151 bits (324), Expect = 1e-035
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
INELIS+LQ LLPS+RRRG QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHN
Sbjct: 304 INELISKLQALLPSSRRRGSGQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHN 483
Query: 534 SPGAEIIRSLLR 499
SPGAEIIRS+LR
Sbjct: 484 SPGAEIIRSILR 519
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 369 GVDDEAAEGDLQLHQEPPPGGRRPE 443
Score = 40.9 bits (83), Expect(3) = 2e-009
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 617 QVSLSSFVVDAWLPPRRRALG 679
QVS SSFVVDAW PRRR LG
Sbjct: 401 QVSFSSFVVDAWPEPRRRELG 339
Score = 33.6 bits (67), Expect(3) = 2e-009
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 459 VRQPVAQVVDLPVEALDV 406
Score = 25.4 bits (49), Expect(3) = 2e-009
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 503 MISAPGLLW 477
>gb|BE356942.1|BE356942 DG1_145_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 151 bits (324), Expect = 1e-035
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
INELIS+LQ LLPS+RRRG QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHN
Sbjct: 126 INELISKLQALLPSSRRRGSGQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHN 305
Query: 534 SPGAEIIRSLLR 499
SPGAEIIRS+LR
Sbjct: 306 SPGAEIIRSILR 341
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 191 GVDDEAAEGDLQLHQEPPPGGRRPE 265
Score = 40.9 bits (83), Expect(3) = 2e-009
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 617 QVSLSSFVVDAWLPPRRRALG 679
QVS SSFVVDAW PRRR LG
Sbjct: 223 QVSFSSFVVDAWPEPRRRELG 161
Score = 33.6 bits (67), Expect(3) = 2e-009
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 281 VRQPVAQVVDLPVEALDV 228
Score = 25.4 bits (49), Expect(3) = 2e-009
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 325 MISAPGLLW 299
>gb|CW465791.1|CW465791 fsbb001f216l12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216l12, DNA
sequence
Length = 644
Score = 115 bits (245), Expect(2) = 1e-030
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 159 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 7
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 157 GVDDEAAEGDLQLHQEPPPGGRRPE 83
Score = 41.4 bits (84), Expect(2) = 1e-030
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQ 649
INELIS+LQ LLPS+RRRG Q
Sbjct: 454 INELISKLQALLPSSRRRGSGQ 389
Score = 33.6 bits (67), Expect(3) = 2e-004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 67 VRQPVAQVVDLPVEALDV 120
Score = 25.4 bits (49), Expect(3) = 2e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 23 MISAPGLLW 49
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 617 QVSLSSFVVDA 649
QVS SSFVVDA
Sbjct: 125 QVSFSSFVVDA 157
>gb|CW274970.1|CW274970 104_748_11404711_116_35378_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404711, DNA
sequence
Length = 717
Score = 115 bits (245), Expect(2) = 1e-030
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 308 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 460
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 310 GVDDEAAEGDLQLHQEPPPGGRRPE 384
Score = 41.4 bits (84), Expect(2) = 1e-030
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQ 649
INELIS+LQ LLPS+RRRG Q
Sbjct: 13 INELISKLQALLPSSRRRGSGQ 78
Score = 33.6 bits (67), Expect(3) = 2e-004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 400 VRQPVAQVVDLPVEALDV 347
Score = 25.4 bits (49), Expect(3) = 2e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 444 MISAPGLLW 418
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 617 QVSLSSFVVDA 649
QVS SSFVVDA
Sbjct: 342 QVSFSSFVVDA 310
>gb|CW222860.1|CW222860 104_658_11202600_148_37179_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202600, DNA
sequence
Length = 760
Score = 122 bits (261), Expect(3) = 8e-028
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 641 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 474
Score = 61.6 bits (128), Expect(2) = 1e-010
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 639 GVDDEAAQGDLQLHQEPAPGGGRPE 565
Score = 38.2 bits (77), Expect(5) = 5e-009
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 549 VGQAVAQVVHLPVQALDV 602
Score = 25.4 bits (49), Expect(5) = 5e-009
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 607 QVSLSSFVVDA 639
Score = 25.4 bits (49), Expect(5) = 5e-009
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 505 MISAPGLLW 531
Score = 25.4 bits (49), Expect(2) = 1e-010
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 593 GRWTI*ATAC 564
GRWT *ATAC
Sbjct: 583 GRWTT*ATAC 554
Score = 23.1 bits (44), Expect(5) = 5e-009
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 177 ATRSIARKQTTKSGRER 227
+T A KQTTKSG R
Sbjct: 167 STSKEANKQTTKSGEVR 217
Score = 22.1 bits (42), Expect(3) = 8e-028
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -2
Query: 61 TDNRPTAS 38
TDNRPTAS
Sbjct: 36 TDNRPTAS 13
Score = 21.7 bits (41), Expect(3) = 8e-028
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 457 LSLHGRRP 434
Score = 21.7 bits (41), Expect(5) = 5e-009
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +2
Query: 70 KQLDPDH 90
KQLDPDH
Sbjct: 44 KQLDPDH 64
>gb|CW432487.1|CW432487 fsbb001f147d15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147d15, DNA
sequence
Length = 528
Score = 122 bits (261), Expect(2) = 5e-027
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 75 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 242
Score = 61.6 bits (128), Expect(2) = 1e-010
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 77 GVDDEAAQGDLQLHQEPAPGGGRPE 151
Score = 38.2 bits (77), Expect(3) = 2e-006
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 167 VGQAVAQVVHLPVQALDV 114
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / -3
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 109 QVSLSSFVVDA 77
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 211 MISAPGLLW 185
Score = 25.4 bits (49), Expect(2) = 1e-010
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 593 GRWTI*ATAC 564
GRWT *ATAC
Sbjct: 133 GRWTT*ATAC 162
Score = 21.7 bits (41), Expect(2) = 5e-027
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 259 LSLHGRRP 282
>gb|CW057154.1|CW057154 104_299_10518068_115_30171 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518068, DNA
sequence
Length = 544
Score = 122 bits (261), Expect(2) = 5e-027
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 462 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 295
Score = 61.6 bits (128), Expect = 2e-008
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 460 GVDDEAAQGDLQLHQEPAPGGGRPE 386
Score = 38.2 bits (77), Expect(4) = 2e-007
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 370 VGQAVAQVVHLPVQALDV 423
Score = 25.4 bits (49), Expect(4) = 2e-007
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 428 QVSLSSFVVDA 460
Score = 25.4 bits (49), Expect(4) = 2e-007
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 326 MISAPGLLW 352
Score = 22.1 bits (42), Expect(4) = 2e-007
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 192 ARKQTTKSGRER 227
A KQTTKSG R
Sbjct: 3 ANKQTTKSGEVR 38
Score = 21.7 bits (41), Expect(2) = 5e-027
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 278 LSLHGRRP 255
>gb|CW092755.1|CW092755 104_455_10999359_114_33045_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999359, DNA
sequence
Length = 644
Score = 122 bits (261), Expect(2) = 6e-027
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 329 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 162
Score = 61.6 bits (128), Expect(2) = 1e-010
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 327 GVDDEAAQGDLQLHQEPAPGGGRPE 253
Score = 38.2 bits (77), Expect(3) = 2e-006
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 237 VGQAVAQVVHLPVQALDV 290
Score = 25.4 bits (49), Expect(2) = 1e-010
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 593 GRWTI*ATAC 564
GRWT *ATAC
Sbjct: 271 GRWTT*ATAC 242
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 295 QVSLSSFVVDA 327
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 193 MISAPGLLW 219
Score = 21.7 bits (41), Expect(2) = 6e-027
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 145 LSLHGRRP 122
>gb|CW434401.1|CW434401 fsbb001f150b10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150b10, DNA
sequence
Length = 667
Score = 122 bits (261), Expect(2) = 6e-027
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 285 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 452
Score = 61.6 bits (128), Expect(2) = 1e-010
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 287 GVDDEAAQGDLQLHQEPAPGGGRPE 361
Score = 38.2 bits (77), Expect(3) = 2e-006
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 377 VGQAVAQVVHLPVQALDV 324
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 319 QVSLSSFVVDA 287
Score = 25.4 bits (49), Expect(2) = 1e-010
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 593 GRWTI*ATAC 564
GRWT *ATAC
Sbjct: 343 GRWTT*ATAC 372
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 421 MISAPGLLW 395
Score = 21.7 bits (41), Expect(2) = 6e-027
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 469 LSLHGRRP 492
>gb|BZ367148.1|BZ367148 id02f11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02f11 5', DNA sequence
Length = 696
Score = 122 bits (261), Expect = 6e-027
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 254 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 421
Score = 61.6 bits (128), Expect(2) = 7e-009
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 256 GVDDEAAQGDLQLHQEPAPGGGRPE 330
Score = 38.2 bits (77), Expect(3) = 2e-006
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 346 VGQAVAQVVHLPVQALDV 293
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 288 QVSLSSFVVDA 256
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 390 MISAPGLLW 364
Score = 21.7 bits (41), Expect(2) = 7e-009
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 438 LSLHGRRP 461
>gb|CW360357.1|CW360357 fsbb001f028g13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g13, DNA
sequence
Length = 688
Score = 122 bits (261), Expect = 6e-027
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSV 484
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRSLLR* KSV
Sbjct: 453 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR*LKSV 286
Score = 61.6 bits (128), Expect(2) = 7e-009
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAAQGDLQLHQEPAPGGGR E
Sbjct: 451 GVDDEAAQGDLQLHQEPAPGGGRPE 377
Score = 38.2 bits (77), Expect(3) = 2e-006
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 559 VRQAVAQIVHLPVQALDV 612
V QAVAQ+VHLPVQALDV
Sbjct: 361 VGQAVAQVVHLPVQALDV 414
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 419 QVSLSSFVVDA 451
Score = 25.4 bits (49), Expect(3) = 2e-006
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 317 MISAPGLLW 343
Score = 21.7 bits (41), Expect(2) = 7e-009
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 425 LSIHGRRP 402
LS+HGRRP
Sbjct: 269 LSLHGRRP 246
>gb|CW277504.1|CW277504 104_751_11406063_148_35413_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406063, DNA
sequence
Length = 707
Score = 115 bits (245), Expect = 1e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 39 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 191
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 41 GVDDEAAEGDLQLHQEPPPGGRRPE 115
Score = 33.6 bits (67), Expect(3) = 2e-004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 131 VRQPVAQVVDLPVEALDV 78
Score = 25.4 bits (49), Expect(3) = 2e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 175 MISAPGLLW 149
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 617 QVSLSSFVVDA 649
QVS SSFVVDA
Sbjct: 73 QVSFSSFVVDA 41
>gb|CW281385.1|CW281385 104_757_11408148_148_35460_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408148, DNA
sequence
Length = 634
Score = 115 bits (245), Expect = 1e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 378 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 226
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 376 GVDDEAAEGDLQLHQEPPPGGRRPE 302
Score = 33.6 bits (67), Expect(3) = 2e-004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 286 VRQPVAQVVDLPVEALDV 339
Score = 25.4 bits (49), Expect(3) = 2e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 242 MISAPGLLW 268
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 617 QVSLSSFVVDA 649
QVS SSFVVDA
Sbjct: 344 QVSFSSFVVDA 376
>gb|CW295944.1|CW295944 104_777_11461223_148_35624_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461223, DNA
sequence
Length = 603
Score = 115 bits (245), Expect = 1e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 391 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 239
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 389 GVDDEAAEGDLQLHQEPPPGGRRPE 315
Score = 33.6 bits (67), Expect(3) = 2e-004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 299 VRQPVAQVVDLPVEALDV 352
Score = 25.4 bits (49), Expect(3) = 2e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 255 MISAPGLLW 281
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 617 QVSLSSFVVDA 649
QVS SSFVVDA
Sbjct: 357 QVSFSSFVVDA 389
>gb|AW677456.1|AW677456 DG1_7_A12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 115 bits (245), Expect = 1e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 19 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 171
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GDLQLHQEP PGG R E
Sbjct: 21 GVDDEAAEGDLQLHQEPPPGGRRPE 95
Score = 33.6 bits (67), Expect(3) = 2e-004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 111 VRQPVAQVVDLPVEALDV 58
Score = 25.4 bits (49), Expect(3) = 2e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 155 MISAPGLLW 129
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 617 QVSLSSFVVDA 649
QVS SSFVVDA
Sbjct: 53 QVSFSSFVVDA 21
>gb|CL173039.1|CL173039 104_376_10890604_116_31795_124 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890604, DNA
sequence
Length = 714
Score = 102 bits (217), Expect(2) = 7e-024
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q+S +KLLKETC+YIKSLHREVDDLS+RLS LM++MD++SP AEIIRSLLR*P PA
Sbjct: 396 QSSASKLLKETCAYIKSLHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR*PGHATPAR 575
Query: 471 RPRAP 457
P
Sbjct: 576 AAGGP 590
Score = 41.8 bits (85), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -3 / +2
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EA++GD+ LHQEPAPGGGR
Sbjct: 410 EASEGDVCLHQEPAPGGGR 466
Score = 31.8 bits (63), Expect(2) = 7e-024
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRR 661
INELIS+LQ LLP + RR
Sbjct: 93 INELISKLQALLPESSRR 146
>gb|CW477234.1|CW477234 fsbb001f234h16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f234h16, DNA
sequence
Length = 509
Score = 57.4 bits (119), Expect = 2e-007
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDD 580
QASTTKLLKETC+YIKSLHREVDD
Sbjct: 436 QASTTKLLKETCTYIKSLHREVDD 507
Score = 57.4 bits (119), Expect(4) = 4e-022
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGR 581
GVDDEAAQGDL LHQEPAPGGGR
Sbjct: 438 GVDDEAAQGDLHLHQEPAPGGGR 506
Score = 51.5 bits (106), Expect(4) = 4e-022
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQAST 640
INELISRLQTLLPSARRRGGS+ T
Sbjct: 62 INELISRLQTLLPSARRRGGSEVRT 136
Score = 27.2 bits (53), Expect(4) = 4e-022
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 730 GLGGGDQRAYLE 695
G+GGGDQRA+L+
Sbjct: 46 GVGGGDQRAHLQ 81
Score = 27.2 bits (53), Expect(4) = 1e-004
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 580 IVHLPVQALDV 612
+VHLPVQALDV
Sbjct: 507 VVHLPVQALDV 475
Score = 26.3 bits (51), Expect(4) = 4e-022
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 760 DVEPEVPRVDGLGG 719
DVEPEVPRV GG
Sbjct: 19 DVEPEVPRVGVGGG 60
Score = 25.4 bits (49), Expect(4) = 1e-004
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 617 QVSLSSFVVDA 649
QVSLSSFVVDA
Sbjct: 470 QVSLSSFVVDA 438
Score = 24.4 bits (47), Expect(4) = 1e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 653 LPPRRRALG 679
LPPRRRALG
Sbjct: 123 LPPRRRALG 97
Score = 23.1 bits (44), Expect(4) = 1e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 734 DARDLRLDI 760
DARDLRLDI
Sbjct: 45 DARDLRLDI 19
>gb|CW453023.1|CW453023 fsbb001f193n14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f193n14, DNA
sequence
Length = 580
Score = 102 bits (217), Expect(2) = 4e-021
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q+S +KLLKETC+YIKSLHREVDDLS+RLS LM++MD++SP AEIIRSLLR*P PA
Sbjct: 513 QSSASKLLKETCAYIKSLHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR*PGHATPAR 334
Query: 471 RPRAP 457
P
Sbjct: 333 AAGGP 319
Score = 41.8 bits (85), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -3 / -1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EA++GD+ LHQEPAPGGGR
Sbjct: 499 EASEGDVCLHQEPAPGGGR 443
Score = 22.1 bits (42), Expect(2) = 4e-021
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 227 SLSSTLGCLFPC 192
S SS + CLFPC
Sbjct: 187 SSSSDVVCLFPC 152
>gb|CW099509.1|CW099509 104_466_11003588_148_34377_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003588, DNA
sequence
Length = 713
Score = 102 bits (217), Expect(2) = 5e-021
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q+S +KLLKETC+YIKSLHREVDDLS+RLS LM++MD++SP AEIIRSLLR*P PA
Sbjct: 80 QSSASKLLKETCAYIKSLHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR*PGHATPAR 259
Query: 471 RPRAP 457
P
Sbjct: 260 AAGGP 274
Score = 41.8 bits (85), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EA++GD+ LHQEPAPGGGR
Sbjct: 94 EASEGDVCLHQEPAPGGGR 150
Score = 22.1 bits (42), Expect(2) = 5e-021
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / +1
Query: 227 SLSSTLGCLFPC 192
S SS + CLFPC
Sbjct: 406 SSSSDVVCLFPC 441
>gb|CX611827.1|CX611827 ANR1_27_A06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_A06_A002 3', mRNA sequence
Length = 646
Score = 94.5 bits (200), Expect = 2e-018
Identities = 38/71 (53%), Positives = 58/71 (81%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
I++L+S+LQ LLP AR + ++ + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +
Sbjct: 229 ISDLVSKLQDLLPEARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMS 408
Query: 534 SPGAEIIRSLL 502
S A +IRSLL
Sbjct: 409 SAQAAVIRSLL 441
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 306 EGVAGDMQLHQELAPGGGRPE 368
>gb|CX611914.1|CX611914 ANR1_27_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_A06_A002 5', mRNA sequence
Length = 645
Score = 94.5 bits (200), Expect = 2e-018
Identities = 38/71 (53%), Positives = 58/71 (81%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
I++L+S+LQ LLP AR + ++ + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +
Sbjct: 203 ISDLVSKLQDLLPEARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMS 382
Query: 534 SPGAEIIRSLL 502
S A +IRSLL
Sbjct: 383 SAQAAVIRSLL 415
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 280 EGVAGDMQLHQELAPGGGRPE 342
>gb|CL162553.1|CL162553 104_355_10806495_116_31833_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806495, DNA
sequence
Length = 578
Score = 91.3 bits (193), Expect(2) = 7e-018
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = -1 / +3
Query: 627 KETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAGRPRAP 457
KETC+YIKSLHREVDDLS+RLS LM++MD++SP AEIIRSLLR*P PA P
Sbjct: 3 KETCAYIKSLHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR*PGHATPARAAGGP 173
Score = 37.3 bits (75), Expect = 0.30
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 628 QGDLQLHQEPAPGGGR 581
+GD+ LHQEPAPGGGR
Sbjct: 2 EGDVCLHQEPAPGGGR 49
Score = 22.1 bits (42), Expect(2) = 7e-018
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / +2
Query: 227 SLSSTLGCLFPC 192
S SS + CLFPC
Sbjct: 305 SSSSDVVCLFPC 340
>gb|CW144697.1|CW144697 104_537_11138079_116_34972_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138079, DNA
sequence
Length = 632
Score = 91.8 bits (194), Expect = 1e-017
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = -1 / +3
Query: 618 CSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
CSYIKSLHREVDDLSDRLSDLM++MDHNSPGAEIIRS+LR
Sbjct: 3 CSYIKSLHREVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 122
Score = 33.6 bits (67), Expect(2) = 0.019
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
VRQ VAQ+V LPV+ALDV
Sbjct: 62 VRQPVAQVVDLPVEALDV 9
Score = 25.4 bits (49), Expect(2) = 0.019
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 515 MISAPGLLW 541
MISAPGLLW
Sbjct: 106 MISAPGLLW 80
>gb|CL187967.1|CL187967 104_404_10901266_114_32445_047 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901266, DNA
sequence
Length = 728
Score = 79.4 bits (167), Expect = 6e-014
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L++TCSYI+SLH+EVD+LS+ L++L+AS D S A +IRSLL *P S RP
Sbjct: 707 QGSAARVLQDTCSYIRSLHQEVDNLSETLAELLASADVTSDQAAVIRSLLM*PPSYRPEK 528
Query: 471 RPRAP 457
+ P
Sbjct: 527 ASKLP 513
Score = 41.4 bits (84), Expect = 0.017
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E A G +QLHQEPAPGGG+ +
Sbjct: 705 GLGGEGAAGHVQLHQEPAPGGGQPQ 631
>gb|CW200417.1|CW200417 104_626_11184054_116_36868_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184054, DNA
sequence
Length = 697
Score = 79.4 bits (167), Expect = 6e-014
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L++TCSYI+SLH+EVD+LS+ L++L+AS D S A +IRSLL *P S RP
Sbjct: 305 QGSAARVLQDTCSYIRSLHQEVDNLSETLAELLASADVTSDQAAVIRSLLM*PPSYRPEK 484
Query: 471 RPRAP 457
+ P
Sbjct: 485 ASKLP 499
Score = 41.4 bits (84), Expect = 0.017
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E A G +QLHQEPAPGGG+ +
Sbjct: 307 GLGGEGAAGHVQLHQEPAPGGGQPQ 381
>gb|CW259755.1|CW259755 104_726_11228601_148_35186_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228601, DNA
sequence
Length = 685
Score = 79.4 bits (167), Expect = 6e-014
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L++TCSYI+SLH+EVD+LS+ L++L+AS D S A +IRSLL *P S RP
Sbjct: 365 QGSAARVLQDTCSYIRSLHQEVDNLSETLAELLASADVTSDQAAVIRSLLM*PPSYRPEK 544
Query: 471 RPRAP 457
+ P
Sbjct: 545 ASKLP 559
Score = 41.4 bits (84), Expect = 0.017
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E A G +QLHQEPAPGGG+ +
Sbjct: 367 GLGGEGAAGHVQLHQEPAPGGGQPQ 441
>gb|BZ368192.1|BZ368192 id11h08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id11h08 5', DNA sequence
Length = 709
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 690 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 541
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 676 EGVAGDMQLHQELAPGGGRPE 614
>gb|CW050175.1|CW050175 104_289_10514492_114_30202 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514492, DNA
sequence
Length = 601
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 538 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 389
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / -3
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 524 EGVAGDMQLHQELAPGGGRPE 462
>gb|CW093354.1|CW093354 104_456_10999729_114_33065_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999729, DNA
sequence
Length = 471
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 298 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 447
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 312 EGVAGDMQLHQELAPGGGRPE 374
>gb|CW124534.1|CW124534 104_504_11111834_116_34708_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111834, DNA
sequence
Length = 690
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 432 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 581
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 446 EGVAGDMQLHQELAPGGGRPE 508
>gb|CW230886.1|CW230886 104_680_11210834_116_37342_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210834, DNA
sequence
Length = 682
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 384 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 533
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 398 EGVAGDMQLHQELAPGGGRPE 460
>gb|CW416466.1|CW416466 fsbb001f117a09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117a09, DNA
sequence
Length = 718
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 161 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 310
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 175 EGVAGDMQLHQELAPGGGRPE 237
>gb|CN126308.1|CN126308 RHOH1_16_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_H09_A002 3', mRNA sequence
Length = 567
Score = 72.5 bits (152), Expect = 7e-012
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 213 QVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 362
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 227 EGVAGDMQLHQELAPGGGRPE 289
>gb|CW106693.1|CW106693 104_476_11096128_116_34467_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096128, DNA
sequence
Length = 647
Score = 51.5 bits (106), Expect(3) = 1e-011
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQAST 640
INELISRLQTLLPSARRRGGS+ T
Sbjct: 405 INELISRLQTLLPSARRRGGSEVRT 479
Score = 29.0 bits (57), Expect(3) = 1e-011
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 763 DDVEPEVPRVDGLGG 719
DDVEPEVPRV GG
Sbjct: 359 DDVEPEVPRVGVGGG 403
Score = 27.2 bits (53), Expect(3) = 1e-011
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 730 GLGGGDQRAYLE 695
G+GGGDQRA+L+
Sbjct: 389 GVGGGDQRAHLQ 424
Score = 25.4 bits (49), Expect(2) = 7.6
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 734 DARDLRLDIVL 766
DARDLRLDIV+
Sbjct: 388 DARDLRLDIVV 356
Score = 24.4 bits (47), Expect(2) = 7.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 653 LPPRRRALG 679
LPPRRRALG
Sbjct: 466 LPPRRRALG 440
>gb|CW360356.1|CW360356 fsbb001f028g13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g13, DNA
sequence
Length = 647
Score = 51.5 bits (106), Expect(3) = 1e-011
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQAST 640
INELISRLQTLLPSARRRGGS+ T
Sbjct: 408 INELISRLQTLLPSARRRGGSEVRT 482
Score = 29.0 bits (57), Expect(3) = 1e-011
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 763 DDVEPEVPRVDGLGG 719
DDVEPEVPRV GG
Sbjct: 362 DDVEPEVPRVGVGGG 406
Score = 27.2 bits (53), Expect(3) = 1e-011
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 730 GLGGGDQRAYLE 695
G+GGGDQRA+L+
Sbjct: 392 GVGGGDQRAHLQ 427
Score = 25.4 bits (49), Expect(2) = 7.6
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 734 DARDLRLDIVL 766
DARDLRLDIV+
Sbjct: 391 DARDLRLDIVV 359
Score = 24.4 bits (47), Expect(2) = 7.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 653 LPPRRRALG 679
LPPRRRALG
Sbjct: 469 LPPRRRALG 443
>gb|CW106694.1|CW106694 104_476_11096128_148_34463_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096128, DNA
sequence
Length = 586
Score = 51.5 bits (106), Expect(3) = 1e-011
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQAST 640
INELISRLQTLLPSARRRGGS+ T
Sbjct: 328 INELISRLQTLLPSARRRGGSEVRT 254
Score = 29.0 bits (57), Expect(3) = 1e-011
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 763 DDVEPEVPRVDGLGG 719
DDVEPEVPRV GG
Sbjct: 374 DDVEPEVPRVGVGGG 330
Score = 27.2 bits (53), Expect(3) = 1e-011
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 730 GLGGGDQRAYLE 695
G+GGGDQRA+L+
Sbjct: 344 GVGGGDQRAHLQ 309
Score = 25.4 bits (49), Expect(2) = 7.7
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 734 DARDLRLDIVL 766
DARDLRLDIV+
Sbjct: 345 DARDLRLDIVV 377
Score = 24.4 bits (47), Expect(2) = 7.7
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 653 LPPRRRALG 679
LPPRRRALG
Sbjct: 267 LPPRRRALG 293
>gb|CW334849.1|CW334849 104_833_11482718_148_36072_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482718, DNA
sequence
Length = 665
Score = 70.7 bits (148), Expect = 2e-011
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++L+ETCSYI+SLHREVDDLSD LS+L+ + D ++ A +IRSLL
Sbjct: 332 QVPSARVLQETCSYIRSLHREVDDLSDLLSELLTTADVSTAQAAVIRSLL 183
Score = 36.3 bits (73), Expect = 0.57
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QL+ EPAPGG R +
Sbjct: 330 GAVGEGAAGDMQLYPEPAPGGRRPQ 256
>gb|BF420938.1|BF420938 FM1_5_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 564
Score = 70.7 bits (148), Expect = 2e-011
Identities = 28/47 (59%), Positives = 41/47 (87%)
Frame = -1 / +1
Query: 642 TTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
+ ++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 253 SARVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 393
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 258 EGVAGDMQLHQELAPGGGRPE 320
>gb|CW110509.1|CW110509 104_483_11103751_148_34521_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103751, DNA
sequence
Length = 706
Score = 70.3 bits (147), Expect = 3e-011
Identities = 28/50 (56%), Positives = 41/50 (82%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
Q + ++ +ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 701 QVPSARVCQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 552
Score = 39.6 bits (80), Expect = 0.062
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E GD+QLHQE APGGGR E
Sbjct: 687 EGVPGDMQLHQELAPGGGRPE 625
>gb|CW495938.1|CW495938 fsbb001f287o20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f287o20, DNA
sequence
Length = 755
Score = 58.8 bits (122), Expect(2) = 5e-011
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDR 568
Q+S +KLLKETC+YIKSLHREVDDLS+R
Sbjct: 670 QSSASKLLKETCAYIKSLHREVDDLSER 753
Score = 41.8 bits (85), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EA++GD+ LHQEPAPGGGR
Sbjct: 684 EASEGDVCLHQEPAPGGGR 740
Score = 31.8 bits (63), Expect(2) = 5e-011
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRR 661
INELIS+LQ LLP + RR
Sbjct: 367 INELISKLQALLPESSRR 420
>gb|BZ693575.1|BZ693575 SP__Ba0036F01.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0036F01 3', DNA sequence
Length = 1185
Score = 68.9 bits (144), Expect = 9e-011
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = -1 / -3
Query: 615 SYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
++ +LHRE DL+DRLSD+M++MDHNSPGAEIIRS+LR
Sbjct: 475 AFSTTLHREFVDLTDRLSDMMSTMDHNSPGAEIIRSILR 359
>gb|CW787576.1|CW787576 SP__Ba0036F01.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0036F01 3', DNA sequence
Length = 434
Score = 68.9 bits (144), Expect = 9e-011
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = -1 / -2
Query: 615 SYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
++ +LHRE DL+DRLSD+M++MDHNSPGAEIIRS+LR
Sbjct: 427 AFSTTLHREFVDLTDRLSDMMSTMDHNSPGAEIIRSILR 311
>gb|CW259754.1|CW259754 104_726_11228601_116_35190_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228601, DNA
sequence
Length = 700
Score = 68.4 bits (143), Expect = 1e-010
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = -1 / -2
Query: 624 ETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAGRPRAP 457
+TCSYI+SLH+E D+LS+ L++L+AS D S A +IRSLL *P S RP + P
Sbjct: 699 DTCSYIRSLHQEWDNLSETLAELLASADVTSDQAAVIRSLLM*PPSYRPEKASKLP 532
>gb|CL197378.1|CL197378 104_424_10943705_116_32339_075 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943705, DNA
sequence
Length = 585
Score = 51.9 bits (107), Expect(2) = 4e-009
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDD 580
Q+S +KLLKETC+YIKSLHREVDD
Sbjct: 74 QSSASKLLKETCAYIKSLHREVDD 3
Score = 41.8 bits (85), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -3 / -1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EA++GD+ LHQEPAPGGGR
Sbjct: 60 EASEGDVCLHQEPAPGGGR 4
Score = 31.8 bits (63), Expect(2) = 4e-009
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRR 661
INELIS+LQ LLP + RR
Sbjct: 377 INELISKLQALLPESSRR 324
>gb|CW295943.1|CW295943 104_777_11461223_116_35620_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461223, DNA
sequence
Length = 641
Score = 41.4 bits (84), Expect(2) = 9e-009
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEP 599
GVDD+AA+GDLQLHQEP
Sbjct: 588 GVDDDAAEGDLQLHQEP 638
Score = 41.4 bits (84), Expect(2) = 9e-009
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQ 649
INELIS+LQ LLPS+RRRG Q
Sbjct: 291 INELISKLQALLPSSRRRGSGQ 356
Score = 40.5 bits (82), Expect = 0.031
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSL 598
QASTT LLKETCSYIKSL
Sbjct: 586 QASTTTLLKETCSYIKSL 639
>gb|CL192385.1|CL192385 104_415_10940198_114_32259_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940198, DNA
sequence
Length = 521
Score = 49.2 bits (101), Expect(2) = 2e-008
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVD 583
Q+S +KLLKETC+YIKSLHREVD
Sbjct: 452 QSSASKLLKETCAYIKSLHREVD 520
Score = 39.6 bits (80), Expect = 0.062
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGG 584
EA++GD+ LHQEPAPGGG
Sbjct: 466 EASEGDVCLHQEPAPGGG 519
Score = 31.8 bits (63), Expect(2) = 2e-008
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRR 661
INELIS+LQ LLP + RR
Sbjct: 149 INELISKLQALLPESSRR 202
>gb|CL176773.1|CL176773 104_383_10893351_116_31773_183 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893351, DNA
sequence
Length = 186
Score = 60.6 bits (126), Expect = 3e-008
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEII 514
Q S ++L++TCSYI+SLH+EVD+LS+ L++L+AS D S A +I
Sbjct: 48 QGSAARVLQDTCSYIRSLHQEVDNLSETLAELLASADVTSDQAAVI 185
Score = 41.4 bits (84), Expect = 0.017
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E A G +QLHQEPAPGGG+ +
Sbjct: 50 GLGGEGAAGHVQLHQEPAPGGGQPQ 124
>gb|CL192386.1|CL192386 104_415_10940198_116_32263_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940198, DNA
sequence
Length = 609
Score = 49.6 bits (102), Expect(2) = 1e-005
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / -3
Query: 573 DRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAGRPRAP 457
+RLS LM++MD++SP AEIIRSLLR*P PA P
Sbjct: 607 ERLSGLMSTMDNDSPQAEIIRSLLR*PGHATPARAAGGP 491
Score = 22.1 bits (42), Expect(2) = 1e-005
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 227 SLSSTLGCLFPC 192
S SS + CLFPC
Sbjct: 359 SSSSDVVCLFPC 324
>gb|CL157482.1|CL157482 104_345_10783607_114_31477_167 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783607, DNA
sequence
Length = 612
Score = 49.6 bits (102), Expect = 5e-005
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = -1 / -3
Query: 600 LHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
LH+EVDDLS+RLS+L+A+ D +S A +IRSLL
Sbjct: 610 LHQEVDDLSERLSELLATSDMSSAQAAVIRSLL 512
>gb|CW028774.1|CW028774 104_256_10499295_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499295, DNA
sequence
Length = 753
Score = 47.8 bits (98), Expect = 2e-004
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSD 559
Q S ++L++TCSYI+SLH+EVD+LS+ L++
Sbjct: 94 QGSAERVLQDTCSYIRSLHQEVDNLSETLAE 2
Score = 36.8 bits (74), Expect = 0.41
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E A G +QLHQE APGGG+ +
Sbjct: 92 GLGGEGAAGHVQLHQELAPGGGQPQ 18
>gb|CW276142.1|CW276142 104_749_11405332_116_35387_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405332, DNA
sequence
Length = 729
Score = 45.5 bits (93), Expect = 0.001
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSD 571
Q S ++L++TCSYI+SLH+EVD+LS+
Sbjct: 81 QGSAARVLQDTCSYIRSLHQEVDNLSE 1
Score = 41.4 bits (84), Expect = 0.017
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E A G +QLHQEPAPGGG+ +
Sbjct: 79 GLGGEGAAGHVQLHQEPAPGGGQPQ 5
>gb|CW195800.1|CW195800 104_619_11180827_148_36803_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180827, DNA
sequence
Length = 590
Score = 38.2 bits (77), Expect(2) = 0.008
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 675 SARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
+ + + S +S ++L+E C YI+ LH E+D ++ L+ L+
Sbjct: 304 NGKAKASSSSSRARVLREACVYIRRLHAELDAAAEHLARLL 182
Score = 22.1 bits (42), Expect(2) = 0.008
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 711 NELISRLQTLLP 676
+EL+SRL+ LLP
Sbjct: 361 DELVSRLRALLP 326
>gb|CW063461.1|CW063461 104_309_10522019_115_30140 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522019, DNA
sequence
Length = 567
Score = 41.4 bits (84), Expect = 0.017
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQ 649
INELIS+LQ LLPS+RRRG Q
Sbjct: 298 INELISKLQALLPSSRRRGSGQ 363
>gb|CW281384.1|CW281384 104_757_11408148_116_35464_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408148, DNA
sequence
Length = 622
Score = 41.4 bits (84), Expect = 0.017
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQ 649
INELIS+LQ LLPS+RRRG Q
Sbjct: 327 INELISKLQALLPSSRRRGSGQ 392
>gb|CW465790.1|CW465790 fsbb001f216l12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216l12, DNA
sequence
Length = 704
Score = 41.4 bits (84), Expect = 0.017
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQ 649
INELIS+LQ LLPS+RRRG Q
Sbjct: 411 INELISKLQALLPSSRRRGSGQ 476
>gb|CW277503.1|CW277503 104_751_11406063_116_35409_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406063, DNA
sequence
Length = 644
Score = 39.6 bits (80), Expect = 0.059
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -1 / -3
Query: 549 SMDHNSPGAEIIRSLLR 499
+MDHNSPGAEIIRS+LR
Sbjct: 642 TMDHNSPGAEIIRSILR 592
>gb|CW273791.1|CW273791 104_746_11404089_148_35366_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404089, DNA
sequence
Length = 409
Score = 35.9 bits (72), Expect = 0.75
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1 / +2
Query: 391 WREAGRRPWMERDSARADAAYMRRAWPAGRT 483
W AG R W + A + MRR WP+ RT
Sbjct: 260 WAAAGSRTWRRWQTCGAPTSCMRRTWPSPRT 352
>gb|CW139640.1|CW139640 104_529_11135348_148_34909_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135348, DNA
sequence
Length = 516
Score = 35.4 bits (71), Expect = 1.0
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2 / -2
Query: 344 MHGYTHTLGNALRSGDGERPAVVHGWRETARAQMLHICGARGR 472
+HG + LG DG RPA W AR M H R R
Sbjct: 425 VHGMSAALGRTSERADGRRPATARHWPARARQ*MRHATAWRPR 297
>gb|BG412901.1|BG412901 OV2_36_C10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 35.4 bits (71), Expect = 1.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3 / +3
Query: 484 PSGRPATRAAYMQHLRARCLSPSMDDGRPLAIARSQRIAECVCVPMHIAAEYT 326
P P +A L ARC PS++ G P +A S ++ E + IA T
Sbjct: 42 PQATPHYHSACCARLLARCSPPSLEHGVPHELAASSQVGEARAATLAIAPSAT 200
>gb|CF483618.1|CF483618 POL1_23_C04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_23_C04_A002 5', mRNA sequence
Length = 727
Score = 35.4 bits (71), Expect = 1.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3 / +1
Query: 484 PSGRPATRAAYMQHLRARCLSPSMDDGRPLAIARSQRIAECVCVPMHIAAEYT 326
P P +A L ARC PS++ G P +A S ++ E + IA T
Sbjct: 43 PQATPHYHSACCARLLARCSPPSLEHGVPHELAASSQVGEARAATLAIAPSAT 201
>gb|CL152152.1|CL152152 104_335_10779758_116_31364_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779758, DNA
sequence
Length = 650
Score = 35.0 bits (70), Expect = 1.4
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -2 / +2
Query: 461 RRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
R + + S+RALSLS+ GRR RH + + RV V A SS
Sbjct: 137 RCLISRSSRALSLSLSGRRLVDRHHRRTPGSRVVVGLLARSS 262
>gb|CW152083.1|CW152083 104_553_11144300_116_36325_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144300, DNA
sequence
Length = 707
Score = 35.0 bits (70), Expect = 1.4
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -2 / +1
Query: 461 RRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
R + + S+RALSLS+ GRR RH + + RV V A SS
Sbjct: 313 RCLISRSSRALSLSLSGRRLVDRHHRRTPGSRVVVGLLARSS 438
>gb|CW152084.1|CW152084 104_553_11144300_148_36330_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144300, DNA
sequence
Length = 692
Score = 35.0 bits (70), Expect = 1.4
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -2 / -3
Query: 461 RRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
R + + S+RALSLS+ GRR RH + + RV V A SS
Sbjct: 432 RCLISRSSRALSLSLSGRRLVDRHHRRTPGSRVVVGLLARSS 307
>gb|BI074600.1|BI074600 IP1_13_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 533
Score = 35.0 bits (70), Expect = 1.4
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -2 / +2
Query: 461 RRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
R + + S+RALSLS+ GRR RH + + RV V A SS
Sbjct: 50 RCLISRSSRALSLSLSGRRLVDRHHRRTPGSRVVVGLLARSS 175
>gb|BM322460.1|BM322460 PIC1_5_B02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 520
Score = 35.0 bits (70), Expect = 1.4
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -2 / +3
Query: 461 RRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
R + + S+RALSLS+ GRR RH + + RV V A SS
Sbjct: 15 RCLISRSSRALSLSLSGRRLVDRHHRRTPGSRVVVGLLARSS 140
>gb|CD427405.1|CD427405 SA1_30_A11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_30_A11_A002 3', mRNA sequence
Length = 719
Score = 26.7 bits (52), Expect(2) = 1.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3 / -2
Query: 426 RQRARRCCIYAARVAGRPDGRTW 494
R RRCC R GR R W
Sbjct: 259 RSATRRCCGCRTRCRGRTSARWW 191
Score = 25.4 bits (49), Expect(2) = 1.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1 / -3
Query: 352 VHTHTRQCAEIWRWREAGRRPWMERDSARAD 444
V+TH + R+AGR+P + D AR D
Sbjct: 348 VYTHAYVLLLLAGVRDAGRQPDRDADGARDD 256
>gb|CW238112.1|CW238112 104_694_11216546_148_37399_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216546, DNA
sequence
Length = 610
Score = 26.7 bits (52), Expect(2) = 1.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3 / +2
Query: 426 RQRARRCCIYAARVAGRPDGRTW 494
R RRCC R GR R W
Sbjct: 467 RSATRRCCGCRTRCRGRTSARWW 535
Score = 25.4 bits (49), Expect(2) = 1.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1 / +3
Query: 352 VHTHTRQCAEIWRWREAGRRPWMERDSARAD 444
V+TH + R+AGR+P + D AR D
Sbjct: 378 VYTHAYVLLLLAGVRDAGRQPDRDADGARDD 470
>gb|CW512267.1|CW512267 115_1_10510376_1_30023 Sorghum unfiltered library (LibID: 115)
Sorghum bicolor genomic clone 10510376, DNA sequence
Length = 646
Score = 34.5 bits (69), Expect = 2.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1 / +2
Query: 367 RQCAEIWRWREAGRRPWMERDS 432
RQC E WRWR RP R S
Sbjct: 173 RQCTETWRWRHGRNRPEPRRSS 238
>gb|CW381708.1|CW381708 fsbb001f063d24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063d24, DNA
sequence
Length = 566
Score = 34.5 bits (69), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3 / -2
Query: 402 RPSSMDGERQRARRCCIYAARVAGRPDGRTW 494
R +++ R+RARRCC + R P GR W
Sbjct: 532 RSAAIQRGRERARRCCCWRRRGRPGPRGRRW 440
>gb|CD235229.1|CD235229 SS1_28_G10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_G10_A012 3', mRNA sequence
Length = 668
Score = 34.5 bits (69), Expect = 2.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPG 526
+ T +L E +YIK LH +V LSD +S D+N+ G
Sbjct: 224 KTDTASVLYEAINYIKWLHEQVQLLSDPYMKTSSSKDYNAWG 349
>gb|CD431936.1|CD431936 ETH1_12_B04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_12_B04_A002 3', mRNA sequence
Length = 528
Score = 34.5 bits (69), Expect = 2.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPG 526
+ T +L E +YIK LH +V LSD +S D+N+ G
Sbjct: 77 KTDTASVLYEAINYIKWLHEQVQLLSDPYMKTSSSKDYNAWG 202
>gb|CW027451.1|CW027451 104_254_10498523_114_30395 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498523, DNA
sequence
Length = 853
Score = 34.1 bits (68), Expect = 2.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1 / +1
Query: 337 LLYAWVHTHTRQCAEIWRWREAGRR 411
LL W TH R +WRW RR
Sbjct: 673 LLAQWCSTHARHSCTLWRWSSTARR 747
>gb|CW027452.1|CW027452 104_254_10498523_116_30396 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498523, DNA
sequence
Length = 747
Score = 34.1 bits (68), Expect = 2.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1 / -2
Query: 337 LLYAWVHTHTRQCAEIWRWREAGRR 411
LL W TH R +WRW RR
Sbjct: 311 LLAQWCSTHARHSCTLWRWSSTARR 237
>gb|CW330416.1|CW330416 104_827_11480363_116_36011_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480363, DNA
sequence
Length = 680
Score = 34.1 bits (68), Expect = 2.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1 / +3
Query: 337 LLYAWVHTHTRQCAEIWRWREAGRR 411
LL W TH R +WRW RR
Sbjct: 507 LLAQWCSTHARHSCTLWRWSSTARR 581
>gb|CW330417.1|CW330417 104_827_11480363_148_36012_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480363, DNA
sequence
Length = 706
Score = 34.1 bits (68), Expect = 2.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1 / -1
Query: 337 LLYAWVHTHTRQCAEIWRWREAGRR 411
LL W TH R +WRW RR
Sbjct: 487 LLAQWCSTHARHSCTLWRWSSTARR 413
>gb|CL176863.1|CL176863 104_383_10893418_116_31773_250 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893418, DNA
sequence
Length = 469
Score = 33.6 bits (67), Expect = 3.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1 / -1
Query: 358 THTRQCAEIWRWREAGRRPWMERDSARADAA 450
TH R AE W+ + +G R W +R+ A AA
Sbjct: 430 THARVRAEAWKPQRSGHRRWCDREEESAIAA 338
>gb|CW319756.1|CW319756 104_812_11474654_116_35887_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474654, DNA
sequence
Length = 591
Score = 33.6 bits (67), Expect = 3.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / +3
Query: 573 DRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAGRP 466
+RL + +M N P ++ RS+ P SVRPAG+P
Sbjct: 324 ERLIPEINTMHANPPPVQLDRSITSTPASVRPAGQP 431
>gb|CW319757.1|CW319757 104_812_11474654_148_35891_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474654, DNA
sequence
Length = 671
Score = 33.6 bits (67), Expect = 3.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / -2
Query: 573 DRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAGRP 466
+RL + +M N P ++ RS+ P SVRPAG+P
Sbjct: 424 ERLIPEINTMHANPPPVQLDRSITSTPASVRPAGQP 317
>gb|CN126733.1|CN126733 RHOH1_18_H01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_H01_A002 5', mRNA sequence
Length = 801
Score = 33.6 bits (67), Expect = 3.7
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2 / +2
Query: 443 SARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
S+RALSLS+ GRR RH + + RV V A SS
Sbjct: 11 SSRALSLSLSGRRLVDRHHRRTPGSRVVVGLLARSS 118
>gb|CW456009.1|CW456009 fsbb001f201c14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f201c14, DNA
sequence
Length = 536
Score = 27.6 bits (54), Expect(2) = 3.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1 / -2
Query: 400 AGRRPWMERDSARADAAYMR 459
AGRRPW R R+ AA R
Sbjct: 295 AGRRPWCPRGGTRSAAARRR 236
Score = 24.9 bits (48), Expect(2) = 3.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1 / -2
Query: 379 EIWRWREAGRRPW 417
E W REA RRPW
Sbjct: 520 EEWLQREACRRPW 482
>gb|CW128919.1|CW128919 104_510_11114278_148_34753_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114278, DNA
sequence
Length = 553
Score = 27.6 bits (54), Expect(2) = 4.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 400 AGRRPWMERDSARADAAYMR 459
AGRRPW R R+ AA R
Sbjct: 302 AGRRPWCPRGGTRSAAARRR 361
Score = 24.9 bits (48), Expect(2) = 4.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1 / +2
Query: 379 EIWRWREAGRRPW 417
E W REA RRPW
Sbjct: 77 EEWLQREACRRPW 115
>gb|CW246498.1|CW246498 104_707_11221364_148_35087_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221364, DNA
sequence
Length = 572
Score = 27.6 bits (54), Expect(2) = 4.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 400 AGRRPWMERDSARADAAYMR 459
AGRRPW R R+ AA R
Sbjct: 296 AGRRPWCPRGGTRSAAARRR 355
Score = 24.9 bits (48), Expect(2) = 4.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1 / +2
Query: 379 EIWRWREAGRRPW 417
E W REA RRPW
Sbjct: 71 EEWLQREACRRPW 109
>gb|CW103181.1|CW103181 104_471_11011743_116_34426_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011743, DNA
sequence
Length = 576
Score = 27.6 bits (54), Expect(2) = 4.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1 / -1
Query: 400 AGRRPWMERDSARADAAYMR 459
AGRRPW R R+ AA R
Sbjct: 306 AGRRPWCPRGGTRSAAARRR 247
Score = 24.9 bits (48), Expect(2) = 4.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1 / -1
Query: 379 EIWRWREAGRRPW 417
E W REA RRPW
Sbjct: 531 EEWLQREACRRPW 493
>gb|CL150158.1|CL150158 104_331_10778319_116_31356_255 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778319, DNA
sequence
Length = 403
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1 / -1
Query: 382 IWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
+WRWR G W R S R AA RR+ GR
Sbjct: 181 VWRWRALGAVWWAVRGSLRDLAAAARRSPERGR 83
>gb|CL154900.1|CL154900 104_340_10781728_114_31469_208 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781728, DNA
sequence
Length = 608
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1 / +1
Query: 382 IWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
+WRWR G W R S R AA RR+ GR
Sbjct: 307 VWRWRALGAVWWAVRGSLRDLAAAARRSPERGR 405
>gb|CL154901.1|CL154901 104_340_10781728_116_31470_208 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781728, DNA
sequence
Length = 690
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1 / -2
Query: 382 IWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
+WRWR G W R S R AA RR+ GR
Sbjct: 422 VWRWRALGAVWWAVRGSLRDLAAAARRSPERGR 324
>gb|CW091769.1|CW091769 104_453_10998757_116_33034_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998757, DNA
sequence
Length = 283
Score = 33.1 bits (66), Expect = 5.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1 / +2
Query: 388 RWREAGRRPWMERDSARADAAYMRRAWPAGR 480
RWR R PW R S R A+ RR P R
Sbjct: 134 RWRSRSRTPWGRR*SRRGSASCSRRRTPRRR 226
>gb|CW160965.1|CW160965 104_567_11150160_116_36419_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150160, DNA
sequence
Length = 667
Score = 33.1 bits (66), Expect = 5.1
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -2 / -1
Query: 476 PAGHARRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYS 339
P G YAASAR++ S G P RHR+ R HA S
Sbjct: 499 PGGRYGGEYAASARSVGWSAGGPGPCVRHRRGCTRARPLAGRHAAS 362
>gb|CW176043.1|CW176043 104_588_11158277_116_36574_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158277, DNA
sequence
Length = 607
Score = 33.1 bits (66), Expect = 5.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1 / +1
Query: 388 RWREAGRRPWMERDSARADAAYMRRAWPAGR 480
RWR R PW R S R A+ RR P R
Sbjct: 73 RWRSRSRTPWGRR*SRRGSASCSRRRTPRRR 165
>gb|CW332743.1|CW332743 104_830_11481577_116_36040_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481577, DNA
sequence
Length = 692
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3 / +2
Query: 333 SAAICMGTHTHSAMR*DLAMARGRPSSMDGERQRARRCCIYAAR 464
S IC T TH D G+ G R+R RRC + R
Sbjct: 50 STTICRETCTHGTGMADKDRTNGKKGRRGGRRRRRRRCALTTVR 181
>gb|CW332744.1|CW332744 104_830_11481577_148_36039_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481577, DNA
sequence
Length = 722
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3 / -2
Query: 333 SAAICMGTHTHSAMR*DLAMARGRPSSMDGERQRARRCCIYAAR 464
S IC T TH D G+ G R+R RRC + R
Sbjct: 688 STTICRETCTHGTGMADKDRTNGKKGRRGGRRRRRRRCALTTVR 557
>gb|CW353710.1|CW353710 fsbb001f016j07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016j07, DNA
sequence
Length = 668
Score = 33.1 bits (66), Expect = 5.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1 / +3
Query: 388 RWREAGRRPWMERDSARADAAYMRRAWPAGR 480
RWR R PW R S R A+ RR P R
Sbjct: 273 RWRSRSRTPWGRR*SRRGSASCSRRRTPRRR 365
>gb|CW360689.1|CW360689 fsbb001f028o10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028o10, DNA
sequence
Length = 611
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3 / +1
Query: 399 GRPSSMDGERQRARRCCIYAARVAGRPDG 485
G PS D R+R RRC ARV GR G
Sbjct: 130 GEPSGPDTIRRRRRRCLSLFARVGGRRTG 216
>gb|CW364396.1|CW364396 fsbb001f036g18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f036g18, DNA
sequence
Length = 640
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3 / -1
Query: 333 SAAICMGTHTHSAMR*DLAMARGRPSSMDGERQRARRCCIYAAR 464
S IC T TH D G+ G R+R RRC + R
Sbjct: 616 STTICRETCTHGTGMADKDRTNGKKGRRGGRRRRRRRCALTTVR 485
>gb|CW364397.1|CW364397 fsbb001f036g18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f036g18, DNA
sequence
Length = 708
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3 / +3
Query: 333 SAAICMGTHTHSAMR*DLAMARGRPSSMDGERQRARRCCIYAAR 464
S IC T TH D G+ G R+R RRC + R
Sbjct: 435 STTICRETCTHGTGMADKDRTNGKKGRRGGRRRRRRRCALTTVR 566
>gb|CW432989.1|CW432989 fsbb001f148a06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148a06, DNA
sequence
Length = 601
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2 / +1
Query: 476 PAGHARRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYS 339
P H RR +++ A L L+ RPAS + +A C C HA++
Sbjct: 76 PVRHRRRQFSSRALVLLLARGRLRPASASQMPTAVLGRCCCKHAWA 213
>gb|CW483697.1|CW483697 fsbb001f245h08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f245h08, DNA
sequence
Length = 693
Score = 33.1 bits (66), Expect = 5.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3 / +3
Query: 399 GRPSSMDGERQRARRCCIYAARVAGRPDG 485
G PS D R+R RRC ARV GR G
Sbjct: 78 GEPSGPDTIRRRRRRCLSLFARVGGRRTG 164
>gb|CW500115.1|CW500115 fsbb001f295e04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295e04, DNA
sequence
Length = 542
Score = 33.1 bits (66), Expect = 5.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1 / +2
Query: 388 RWREAGRRPWMERDSARADAAYMRRAWPAGR 480
RWR R PW R S R A+ RR P R
Sbjct: 341 RWRSRSRTPWGRR*SRRGSASCSRRRTPRRR 433
>gb|CD219779.1|CD219779 CCC1_58_C06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_58_C06_A007 5', mRNA sequence
Length = 658
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / -1
Query: 479 RPAGHARRIYAASARALSLSIHGRRPASRHRQISAHCR 366
RP+ RR +S R L S GRR + R S HCR
Sbjct: 322 RPSSPLRRREGSSRRNLEQSSRGRRA*AERRPSSGHCR 209
>gb|CD220660.1|CD220660 CCC1_68_C01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_68_C01_A007 5', mRNA sequence
Length = 634
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / -2
Query: 479 RPAGHARRIYAASARALSLSIHGRRPASRHRQISAHCR 366
RP+ RR +S R L S GRR + R S HCR
Sbjct: 321 RPSSPLRRREGSSRRNLEQSSRGRRA*AERRPSSGHCR 208
>gb|CD223225.1|CD223225 CCC1_26_A10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_A10_A007 5', mRNA sequence
Length = 636
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / -2
Query: 479 RPAGHARRIYAASARALSLSIHGRRPASRHRQISAHCR 366
RP+ RR +S R L S GRR + R S HCR
Sbjct: 317 RPSSPLRRREGSSRRNLEQSSRGRRA*AERRPSSGHCR 204
>gb|CD225197.1|CD225197 CCC1_38_H07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_H07_A007 5', mRNA sequence
Length = 681
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / -3
Query: 479 RPAGHARRIYAASARALSLSIHGRRPASRHRQISAHCR 366
RP+ RR +S R L S GRR + R S HCR
Sbjct: 316 RPSSPLRRREGSSRRNLEQSSRGRRA*AERRPSSGHCR 203
>gb|CD226597.1|CD226597 CCC1_46_C09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_46_C09_A007 5', mRNA sequence
Length = 655
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / -1
Query: 479 RPAGHARRIYAASARALSLSIHGRRPASRHRQISAHCR 366
RP+ RR +S R L S GRR + R S HCR
Sbjct: 307 RPSSPLRRREGSSRRNLEQSSRGRRA*AERRPSSGHCR 194
>gb|CD226613.1|CD226613 CCC1_46_B09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_46_B09_A007 5', mRNA sequence
Length = 655
Score = 33.1 bits (66), Expect = 5.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / -1
Query: 479 RPAGHARRIYAASARALSLSIHGRRPASRHRQISAHCR 366
RP+ RR +S R L S GRR + R S HCR
Sbjct: 307 RPSSPLRRREGSSRRNLEQSSRGRRA*AERRPSSGHCR 194
>gb|CN139694.1|CN139694 OX1_23_C05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_23_C05_A002 5', mRNA sequence
Length = 728
Score = 33.1 bits (66), Expect = 5.1
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -2 / +3
Query: 461 RRIYAASARALSLSIHGRRPASRHRQISAHCRVCVCTHAYSS 336
R + + S+RALS S+ GRR RH + + RV V A SS
Sbjct: 51 RCLISRSSRALSFSLSGRRLVDRHHRRTPGSRVVVGLLARSS 176
>gb|CX613217.1|CX613217 GABR1_7_A02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_7_A02_A002 3', mRNA sequence
Length = 764
Score = 33.1 bits (66), Expect = 5.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1 / -1
Query: 388 RWREAGRRPWMERDSARADAAYMRRAWPAGR 480
RWR R PW R S R A+ RR P R
Sbjct: 113 RWRSRSRTPWGRR*SRRGSASCSRRRTPRRR 21
>gb|CX614893.1|CX614893 GABR1_17_A10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_A10_A002 3', mRNA sequence
Length = 768
Score = 33.1 bits (66), Expect = 5.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1 / -2
Query: 388 RWREAGRRPWMERDSARADAAYMRRAWPAGR 480
RWR R PW R S R A+ RR P R
Sbjct: 113 RWRSRSRTPWGRR*SRRGSASCSRRRTPRRR 21
>gb|CW041311.1|CW041311 104_274_10506490_114_30470 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506490, DNA
sequence
Length = 306
Score = 24.4 bits (47), Expect(3) = 6.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -1
Query: 610 HQEPAPGGGR 581
H PAPGGGR
Sbjct: 252 HSVPAPGGGR 223
Score = 23.1 bits (44), Expect(3) = 6.5
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = -3 / -1
Query: 472 PATRAAYMQHLRARCLSPSMDDGRPLAIARSQRIAECVCV 353
P R ++ R + ++++G P A+A + CV
Sbjct: 162 PVGRERLRRYQRLLLAAAAVEEGEPQAVALDAAVRATACV 43
Score = 17.6 bits (32), Expect(3) = 6.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1 / -3
Query: 672 ARRRGGSQA 646
ARRRGG A
Sbjct: 292 ARRRGGPGA 266
>gb|CW238453.1|CW238453 104_695_11216739_116_37527_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216739, DNA
sequence
Length = 676
Score = 27.2 bits (53), Expect(2) = 6.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3 / +3
Query: 436 ARCLSPSMDDGRPLAIARSQRIAECVCVPMHIAA 335
A C+S MDD R L + S +A+ VC + IA+
Sbjct: 228 ATCVSL*MDDQRWLLVYASLALADDVCGTVKIAS 329
Score = 24.9 bits (48), Expect(2) = 6.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2 / +3
Query: 194 CYTPSSLAPFPFVCTLGCFVT 132
C+T S P FVC + C T
Sbjct: 528 CFTSSLALPDVFVCLIACL*T 590
>gb|CL156607.1|CL156607 104_343_10782982_116_31476_310 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782982, DNA
sequence
Length = 535
Score = 32.7 bits (65), Expect = 7.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1 / +2
Query: 391 WREAGRRPWMERDSARADAAYMRRAWPAGRT 483
W AG R W + A + RR WP+ RT
Sbjct: 353 WAAAGSRTWRRWRTCSAPTSCRRRTWPSPRT 445
>gb|CW218599.1|CW218599 104_652_11196275_116_37460_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196275, DNA
sequence
Length = 690
Score = 32.7 bits (65), Expect = 7.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -1 / +1
Query: 696 RLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGA 523
R T+ + R GG + +LLK +++++ H+ D+ + + L + + PGA
Sbjct: 352 RRSTIQAATARLGGGRQGNLQLLKLIFTWVQNNHQRPRDVMEEAAGLHGQVSSSPPGA 525
>gb|CW490730.1|CW490730 fsbb001f280e20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280e20, DNA
sequence
Length = 725
Score = 32.7 bits (65), Expect = 7.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -1 / -3
Query: 696 RLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGA 523
R T+ + R GG + +LLK +++++ H+ D+ + + L + + PGA
Sbjct: 495 RRSTIQAATARLGGGRQGNLQLLKLIFTWVQNNHQRPRDVMEEAAGLHGQVSSSPPGA 322
>gb|CW490731.1|CW490731 fsbb001f280e20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280e20, DNA
sequence
Length = 667
Score = 32.7 bits (65), Expect = 7.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -1 / +3
Query: 696 RLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGA 523
R T+ + R GG + +LLK +++++ H+ D+ + + L + + PGA
Sbjct: 351 RRSTIQAATARLGGGRQGNLQLLKLIFTWVQNNHQRPRDVMEEAAGLHGQVSSSPPGA 524
>gb|CW269200.1|CW269200 104_740_11401724_148_36232_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401724, DNA
sequence
Length = 693
Score = 32.7 bits (65), Expect = 7.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3 / +2
Query: 472 PATRAAYMQHLRARCLSPSMDDGRPLAIARSQRIAECVCVPMHIAAEYTQGRQ 314
P A + + R +S + PL I S R +EC C+ I E GRQ
Sbjct: 221 PQLPATWARPFPLRAVSINPRGAPPLQIKASPRSSECECIAGEIEGEREMGRQ 379
>gb|CW419528.1|CW419528 fsbb001f124g17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124g17, DNA
sequence
Length = 700
Score = 32.7 bits (65), Expect = 7.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3 / +2
Query: 472 PATRAAYMQHLRARCLSPSMDDGRPLAIARSQRIAECVCVPMHIAAEYTQGRQ 314
P A + + R +S + PL I S R +EC C+ I E GRQ
Sbjct: 335 PQLPATWARPFPLRAVSINPRGAPPLQIKASPRSSECECIAGEIEGEREMGRQ 493
>gb|CW284984.1|CW284984 104_762_11410090_116_35502_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410090, DNA
sequence
Length = 593
Score = 25.8 bits (50), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +1
Query: 388 RWREAGRRPWMER 426
RWR RRPW+ R
Sbjct: 127 RWRPRRRRPWVPR 165
Score = 24.0 bits (46), Expect(2) = 7.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3 / +1
Query: 315 CRPWVYSAAICMGT 356
CRPW +AA GT
Sbjct: 55 CRPWTCAAAPAAGT 96
>gb|CF072731.1|CF072731 FE1_25_E05.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_25_E05_A002 5', mRNA sequence
Length = 593
Score = 25.8 bits (50), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / -1
Query: 388 RWREAGRRPWMER 426
RWR RRPW+ R
Sbjct: 359 RWRPRRRRPWVPR 321
Score = 24.0 bits (46), Expect(2) = 7.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3 / -1
Query: 315 CRPWVYSAAICMGT 356
CRPW +AA GT
Sbjct: 431 CRPWTCAAAPAAGT 390
>gb|BZ348633.1|BZ348633 hp59e04.g2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp59e04 5', DNA sequence
Length = 560
Score = 25.8 bits (50), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +1
Query: 388 RWREAGRRPWMER 426
RWR RRPW+ R
Sbjct: 493 RWRPRRRRPWVPR 531
Score = 24.0 bits (46), Expect(2) = 7.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3 / +1
Query: 315 CRPWVYSAAICMGT 356
CRPW +AA GT
Sbjct: 421 CRPWTCAAAPAAGT 462
>gb|BZ336712.1|BZ336712 hz38f11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz38f11 5', DNA sequence
Length = 683
Score = 32.2 bits (64), Expect = 9.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1 / -1
Query: 480 PAGRPRAPHICSICARAVSLHPWTTAG 400
PA RA H+ IC HPW AG
Sbjct: 527 PARSTRASHLMLICTAVKQQHPWPPAG 447
>gb|BZ339171.1|BZ339171 ic30d01.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic30d01 5', DNA sequence
Length = 633
Score = 32.2 bits (64), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2 / -2
Query: 359 HTLGNALRSGDGERPAVVHGWRETARAQMLHICGARGR 472
H LG+ R+ G RPA G ++ A H+ G RGR
Sbjct: 578 HPLGSQCRTTRGSRPAG*AGAKQLAVRPAPHVAGLRGR 465
>gb|CW028566.1|CW028566 104_255_10499170_116_30393 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499170, DNA
sequence
Length = 847
Score = 32.2 bits (64), Expect = 9.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1 / -3
Query: 480 PAGRPRAPHICSICARAVSLHPWTTAG 400
PA RA H+ IC HPW AG
Sbjct: 188 PARSTRASHLMLICTAVKQQHPWPPAG 108
>gb|CW119057.1|CW119057 104_495_11108545_116_34624_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108545, DNA
sequence
Length = 563
Score = 32.2 bits (64), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 218 STLGCLFPCYTPSSLAPFPFVCT 150
S++G L PC SS+A P +CT
Sbjct: 382 SSIGFLIPCLLSSSIASLPVICT 314
>gb|CW173352.1|CW173352 104_585_11156797_116_36549_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156797, DNA
sequence
Length = 272
Score = 32.2 bits (64), Expect = 9.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1 / -3
Query: 489 SVRPAGRPRAPHICSICARAVSLH 418
S RPAGRPR+ H C A+SL+
Sbjct: 231 SDRPAGRPRSGHSL*FCTNALSLY 160
>gb|CW207211.1|CW207211 104_636_11188004_116_36976_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188004, DNA
sequence
Length = 90
Score = 32.2 bits (64), Expect = 9.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1 / -1
Query: 480 PAGRPRAPHICSICARAVSLHPWTTAG 400
PA RA H+ IC HPW AG
Sbjct: 87 PARSTRASHLMLICTAVKQQHPWPPAG 7
>gb|CW215093.1|CW215093 104_647_11194362_116_37464_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194362, DNA
sequence
Length = 652
Score = 32.2 bits (64), Expect = 9.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1 / -2
Query: 480 PAGRPRAPHICSICARAVSLHPWTTAG 400
PA RA H+ IC HPW AG
Sbjct: 606 PARSTRASHLMLICTAVKQQHPWPPAG 526
>gb|CW323012.1|CW323012 104_817_11476408_116_35962_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476408, DNA
sequence
Length = 633
Score = 32.2 bits (64), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 218 STLGCLFPCYTPSSLAPFPFVCT 150
S++G L PC SS+A P +CT
Sbjct: 319 SSIGFLIPCLLSSSIASLPVICT 251
>gb|CW389345.1|CW389345 fsbb001f074h23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074h23, DNA
sequence
Length = 549
Score = 32.2 bits (64), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 218 STLGCLFPCYTPSSLAPFPFVCT 150
S++G L PC SS+A P +CT
Sbjct: 330 SSIGFLIPCLLSSSIASLPVICT 262
>gb|CB925715.1|CB925715 ABA1_23_A12.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_A12_A012 3', mRNA sequence
Length = 354
Score = 32.2 bits (64), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / +2
Query: 218 STLGCLFPCYTPSSLAPFPFVCT 150
S++G L PC SS+A P +CT
Sbjct: 227 SSIGFLIPCLLSSSIASLPVICT 295
>gb|CD427836.1|CD427836 ETH1_34_H07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_H07_A002 5', mRNA sequence
Length = 525
Score = 32.2 bits (64), Expect = 9.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 455 IYAASARALSLSIHGRRPASRHRQISAHCRVCV 357
+ S+RALSLS+ GRR RH + + RV V
Sbjct: 90 LIXRSSRALSLSLSGRRLVDRHHRRTPGSRVVV 188
>gb|CF428717.1|CF428717 PH1_17_A11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_A11_A002 3', mRNA sequence
Length = 550
Score = 32.2 bits (64), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / +3
Query: 218 STLGCLFPCYTPSSLAPFPFVCT 150
S++G L PC SS+A P +CT
Sbjct: 411 SSIGFLIPCLLSSSIASLPVICT 479
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 671,446,355
Number of Sequences: 832831
Number of extensions: 8413685
Number of successful extensions: 95503
Number of sequences better than 10.0: 132
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 24000363764
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)