TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8635730.2.1
(1031 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2... 156 6e-037
gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum m... 152 7e-036
gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (L... 149 9e-035
gb|CW203672.1|CW203672 104_631_11186139_148_36907_010 Sorgh... 104 9e-032
gb|AF474128.1| Sorghum bicolor typical P-type R2R3 Myb prot... 91 2e-031
gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1... 135 9e-031
gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorgh... 135 1e-030
gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb prot... 135 1e-030
gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stres... 134 2e-030
gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seed... 134 2e-030
gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated... 134 2e-030
gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stres... 133 3e-030
gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seed... 133 4e-030
gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated ... 132 1e-029
gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seed... 131 2e-029
gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves... 131 2e-029
gb|CW268204.1|CW268204 104_738_11401152_148_35300_084 Sorgh... 88 2e-029
gb|CW078375.1|CW078375 104_392_10896644_148_31925_020 Sorgh... 88 3e-029
gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 88 3e-029
gb|CW323046.1|CW323046 104_817_11476426_116_35958_045 Sorgh... 82 4e-029
gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation... 129 6e-029
gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb prot... 88 8e-029
gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stres... 127 2e-028
gb|CW188235.1|CW188235 104_608_11172922_116_36732_047 Sorgh... 79 6e-028
gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation... 124 2e-027
gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation... 124 2e-027
gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves... 124 2e-027
gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (L... 124 3e-027
gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (L... 124 3e-027
gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG... 124 3e-027
gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG... 124 3e-027
gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seed... 124 3e-027
gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/c... 124 3e-027
gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-defic... 124 3e-027
gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves... 124 3e-027
gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots ... 124 3e-027
gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots S... 124 3e-027
gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum m... 123 4e-027
gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorgh... 123 4e-027
gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorgh... 123 4e-027
gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots ... 123 5e-027
gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/c... 121 2e-026
gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots ... 120 3e-026
gb|CW501261.1|CW501261 fsbb001f296p22k0 Sorghum methylation... 74 5e-026
gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (L... 119 6e-026
gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Me... 119 6e-026
gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated ... 119 6e-026
gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stres... 119 6e-026
gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed see... 119 8e-026
gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots ... 119 8e-026
gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassino... 119 8e-026
gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorgh... 116 1e-025
gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed see... 117 2e-025
gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorgh... 78 3e-025
gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorgh... 78 3e-025
gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots ... 117 3e-025
gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorgh... 78 3e-025
gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorgh... 116 4e-025
gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorgh... 116 4e-025
gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation... 116 4e-025
gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb prot... 116 4e-025
gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb prot... 116 4e-025
gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb prot... 116 4e-025
gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 77 6e-025
gb|CW300902.1|CW300902 104_784_11463921_116_36257_039 Sorgh... 65 7e-025
gb|CW124122.1|CW124122 104_503_11111597_148_34693_019 Sorgh... 116 8e-025
gb|CW032214.1|CW032214 104_261_10501251_114_30363 Sorghum m... 114 2e-024
gb|AF474129.1| Sorghum bicolor typical P-type R2R3 Myb prot... 114 2e-024
gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorgh... 76 2e-024
gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation... 76 2e-024
gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation... 76 3e-024
gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorgh... 76 3e-024
gb|CW323228.1|CW323228 104_817_11476519_148_35956_026 Sorgh... 114 3e-024
gb|CW331265.1|CW331265 104_828_11480814_148_36025_023 Sorgh... 114 3e-024
gb|CX617423.1|CX617423 GABR1_33_D11.g1_A002 GA- or brassino... 114 3e-024
gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb prot... 114 3e-024
gb|AF474132.1| Sorghum bicolor typical P-type R2R3 Myb prot... 114 3e-024
gb|CW037176.1|CW037176 104_268_10504189_115_30382 Sorghum m... 113 4e-024
gb|CX620427.1|CX620427 GABR1_51_F11.g1_A002 GA- or brassino... 112 1e-023
gb|CD429993.1|CD429993 ETH1_16_D05.g1_A002 Ethylene-treated... 111 1e-023
gb|CF428820.1|CF428820 PH1_17_E04.g1_A002 Phosphorous-defic... 111 1e-023
gb|CN144878.1|CN144878 WOUND1_25_B02.g1_A002 Wounded leaves... 111 1e-023
gb|CN145216.1|CN145216 WOUND1_27_B08.g1_A002 Wounded leaves... 111 1e-023
gb|CX622730.1|CX622730 GABR1_65_D10.g1_A002 GA- or brassino... 111 1e-023
gb|CW257497.1|CW257497 104_723_11227368_116_35159_096 Sorgh... 76 2e-023
gb|CD233716.1|CD233716 SS1_3_E01.g1_A012 Salt-stressed seed... 111 2e-023
gb|CD232590.1|CD232590 SS1_46_D12.g1_A012 Salt-stressed see... 111 3e-023
gb|CW172247.1|CW172247 104_583_11156182_148_36535_089 Sorgh... 110 5e-023
gb|CW189094.1|CW189094 104_610_11173783_148_37098_028 Sorgh... 110 5e-023
gb|CW374733.1|CW374733 fsbb001f051l23f0 Sorghum methylation... 110 5e-023
gb|CW493828.1|CW493828 fsbb001f284m17k0 Sorghum methylation... 110 5e-023
gb|AW671674.1|AW671674 LG1_349_F08.b1_A002 Light Grown 1 (L... 110 5e-023
gb|BE595825.1|BE595825 PI1_54_E12.b1_A002 Pathogen induced ... 110 5e-023
gb|CX606768.1|CX606768 ANR1_4_H01.g1_A002 Anaerobic roots S... 110 5e-023
gb|BH245539.1|BH245539 pSB0860 S. bicolor BTx623 PstI-diges... 68 5e-023
gb|CW221956.1|CW221956 104_657_11202124_116_37451_012 Sorgh... 109 7e-023
gb|CD219565.1|CD219565 CCC1_57_B10.g1_A007 Callus culture/c... 109 7e-023
gb|CN129844.1|CN129844 RHOH1_37_F10.g1_A002 Acid- and alkal... 109 7e-023
gb|CW034730.1|CW034730 104_265_10502732_114_30378 Sorghum m... 72 8e-023
gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation... 73 9e-023
gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorgh... 73 9e-023
gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation... 73 9e-023
gb|CW203671.1|CW203671 104_631_11186139_116_37063_010 Sorgh... 65 1e-022
gb|CW170503.1|CW170503 104_580_11155240_116_36516_050 Sorgh... 108 1e-022
gb|CW312811.1|CW312811 104_802_11470957_116_35780_049 Sorgh... 108 1e-022
gb|CD209432.1|CD209432 HS1_42_C05.g1_A012 Heat-shocked seed... 108 1e-022
gb|CD232287.1|CD232287 SS1_39_B06.g1_A012 Salt-stressed see... 108 1e-022
gb|CF430007.1|CF430007 PH1_25_C07.g1_A002 Phosphorous-defic... 108 1e-022
gb|CN126656.1|CN126656 RHOH1_18_A02.g1_A002 Acid- and alkal... 108 1e-022
gb|CN128796.1|CN128796 RHOH1_31_D08.g1_A002 Acid- and alkal... 108 1e-022
gb|CN141027.1|CN141027 OX1_48_H05.g1_A002 Oxidatively-stres... 108 1e-022
gb|CX617094.1|CX617094 GABR1_31_D12.g1_A002 GA- or brassino... 108 1e-022
gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorgh... 73 1e-022
gb|CW218568.1|CW218568 104_652_11196258_148_37530_075 Sorgh... 70 2e-022
gb|BZ330053.1|BZ330053 hv89f07.g1 WGS-SbicolorF (JM107 adap... 68 2e-022
gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated... 89 2e-022
gb|CW331264.1|CW331264 104_828_11480814_116_36026_023 Sorgh... 107 2e-022
gb|CW345225.1|CW345225 104_848_11488373_148_36206_027 Sorgh... 107 2e-022
gb|CW368034.1|CW368034 fsbb001f041m19f0 Sorghum methylation... 107 2e-022
gb|CW488464.1|CW488464 fsbb001f254o02k0 Sorghum methylation... 107 2e-022
gb|CW440966.1|CW440966 fsbb001f159n24k0 Sorghum methylation... 69 3e-022
gb|CW034132.1|CW034132 104_264_10502369_115_30380 Sorghum m... 69 3e-022
gb|CL155566.1|CL155566 104_341_10782238_116_31472_334 Sorgh... 107 3e-022
gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassino... 107 3e-022
gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassino... 107 3e-022
gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassino... 107 3e-022
gb|BZ424048.1|BZ424048 id56d03.g1 WGS-SbicolorF (DH5a methy... 69 4e-022
gb|AW287632.2|AW287632 LG1_244_E07.b1_A002 Light Grown 1 (L... 106 4e-022
gb|CB927439.1|CB927439 ABA1_25_G04.g1_A012 Abscisic acid-tr... 106 4e-022
gb|CW168642.1|CW168642 104_578_11154251_148_36600_042 Sorgh... 65 6e-022
gb|CW496466.1|CW496466 fsbb001f288l19f0 Sorghum methylation... 65 6e-022
gb|CW028250.1|CW028250 104_255_10498984_114_30394 Sorghum m... 68 7e-022
gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum met... 69 9e-022
gb|BE357555.1|BE357555 DG1_21_H10.b1_A002 Dark Grown 1 (DG1... 105 1e-021
gb|BE357751.1|BE357751 DG1_22_H09.b1_A002 Dark Grown 1 (DG1... 105 1e-021
gb|CD227025.1|CD227025 CCC1_49_D01.g1_A007 Callus culture/c... 105 1e-021
gb|CN135779.1|CN135779 OX1_38_H11.g1_A002 Oxidatively-stres... 105 1e-021
gb|AF466199.1| Sorghum bicolor putative receptor protein ki... 64 1e-021
gb|CW394683.1|CW394683 fsbb001f082g12f0 Sorghum methylation... 64 2e-021
gb|CW283140.1|CW283140 104_759_11409088_148_35474_056 Sorgh... 67 2e-021
gb|CW396930.1|CW396930 fsbb001f085j15k0 Sorghum methylation... 97 2e-021
gb|CW257079.1|CW257079 104_722_11227146_148_35149_073 Sorgh... 65 2e-021
gb|CN148046.1|CN148046 WOUND1_53_H06.g1_A002 Wounded leaves... 104 2e-021
gb|CX613554.1|CX613554 GABR1_8_G08.g1_A002 GA- or brassinol... 104 2e-021
gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorgh... 70 2e-021
gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorgh... 70 3e-021
gb|CX612627.1|CX612627 GABR1_3_C04.g1_A002 GA- or brassinol... 104 3e-021
gb|CW035440.1|CW035440 104_266_10503160_115_30377 Sorghum m... 72 4e-021
gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation... 70 4e-021
gb|CW364997.1|CW364997 fsbb001f037f01f0 Sorghum methylation... 69 4e-021
gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation... 70 5e-021
gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorgh... 70 5e-021
gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 72 6e-021
gb|CW432605.1|CW432605 fsbb001f147g12k0 Sorghum methylation... 88 6e-021
gb|CL157022.1|CL157022 104_344_10783261_116_31374_205 Sorgh... 103 6e-021
gb|CW273831.1|CW273831 104_746_11404109_148_35368_023 Sorgh... 103 6e-021
gb|CW290719.1|CW290719 104_770_11413166_116_35566_061 Sorgh... 103 6e-021
gb|CF429061.1|CF429061 PH1_19_D11.g1_A002 Phosphorous-defic... 103 6e-021
gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorgh... 67 7e-021
>gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 528
Score = 156 bits (335), Expect = 6e-037
Identities = 56/77 (72%), Positives = 69/77 (89%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP+++HGG+T+EED +I SLY IGS+WS+IAS+LPGRTDNDVKNY
Sbjct: 277 RCGKSCRLRWLNYLRPDIKHGGYTEEEDRIIWSLYSSIGSRWSIIASKLPGRTDNDVKNY 456
Query: 181 WNTKLKKRYLASSTSTG 231
WNTKLKK+ +A + + G
Sbjct: 457 WNTKLKKKAMAMAAAAG 507
>gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504606, DNA
sequence
Length = 760
Score = 152 bits (327), Expect = 7e-036
Identities = 54/72 (75%), Positives = 67/72 (93%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP+++HGG+T++ED +I SLY IGS+WS+IAS+LPGRTDNDVKNY
Sbjct: 272 RCGKSCRLRWLNYLRPDIKHGGYTEQEDRIICSLYNSIGSRWSIIASKLPGRTDNDVKNY 451
Query: 181 WNTKLKKRYLAS 216
WNTKLKK+ +A+
Sbjct: 452 WNTKLKKKAIAN 487
>gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 437
Score = 149 bits (319), Expect = 9e-035
Identities = 55/68 (80%), Positives = 65/68 (95%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP++RHGGFT EED++ILSLY ++GSKWS+IAS++ GRTDNDVKN+
Sbjct: 232 RCGKSCRLRWLNYLRPDIRHGGFTAEEDAVILSLYTQLGSKWSLIASQMEGRTDNDVKNH 411
Query: 181 WNTKLKKR 204
WNTKLKKR
Sbjct: 412 WNTKLKKR 435
>gb|CW203672.1|CW203672 104_631_11186139_148_36907_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186139, DNA
sequence
Length = 634
Score = 104 bits (222), Expect(3) = 9e-032
Identities = 39/43 (90%), Positives = 43/43 (100%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWS 129
RCGKSCRLRWLNYLRPELRHGGFTDEED+LILSLYGE+GSK++
Sbjct: 48 RCGKSCRLRWLNYLRPELRHGGFTDEEDNLILSLYGELGSKYA 176
Score = 82.2 bits (173), Expect(3) = 4e-024
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +3 / +2
Query: 3 MR*ELPSSLAQLPPPGAPARRLHRRGRQPHLVSLRRDWKQV 125
MR*ELPSSLA+LPPP AP RRLHRRGRQP+ V LRR WKQV
Sbjct: 50 MR*ELPSSLAELPPPRAPTRRLHRRGRQPYPVPLRRAWKQV 172
Score = 72.1 bits (151), Expect(3) = 6e-022
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -3 / -3
Query: 123 LASNLAVERQDEAVFLVGEAAVPELRAEVVEPAKTAALTAS 1
LAS LAVE QD+ VFLVGEAAV EL AEVV+PAKTAALTAS
Sbjct: 170 LASKLAVEGQDKVVFLVGEAAVSELGAEVVQPAKTAALTAS 48
Score = 51.0 bits (105), Expect(3) = 9e-032
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1 / +3
Query: 121 KWSVIASRLPGRTDNDVKNY 180
+WSVIASRLPGRTDNDVKNY
Sbjct: 309 RWSVIASRLPGRTDNDVKNY 368
Score = 48.7 bits (100), Expect(3) = 4e-024
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / +2
Query: 120 QVVGDSVQTPRTDGQRRQELL 182
QVVGDSVQ PRTDGQRRQELL
Sbjct: 308 QVVGDSVQAPRTDGQRRQELL 370
Score = 48.7 bits (100), Expect(3) = 6e-022
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 182 Q*FLTSLSVRPGSLDAITDHL 120
Q*FLTSLSVRPGSLDAITDHL
Sbjct: 370 Q*FLTSLSVRPGSLDAITDHL 308
Score = 26.3 bits (51), Expect(3) = 6e-022
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 357 EGWRCQRK 334
EGWRCQRK
Sbjct: 550 EGWRCQRK 527
Score = 24.9 bits (48), Expect(3) = 9e-032
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1 / +2
Query: 310 QAQQDEPSLPLTPPAFSTDLDTTFAVVDD 396
Q Q + LPLTPPA + DT A D
Sbjct: 503 QRQDEPLLLPLTPPALTDLDDTGTAAFVD 589
Score = 23.5 bits (45), Expect(3) = 4e-024
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 316 QQDEPSLPLTPPAFSTDLDTT 378
+QDEP L P TDLD T
Sbjct: 506 RQDEPLLLPLTPPALTDLDDT 568
>gb|AF474128.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb34) gene, partial
cds
Length = 2210
Score = 90.9 bits (192), Expect(2) = 2e-031
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSK 123
RCGKSCRLRWLNYLRP++RHGGFT EED++ILSLY ++GSK
Sbjct: 1655 RCGKSCRLRWLNYLRPDIRHGGFTAEEDAVILSLYTQLGSK 1777
Score = 66.6 bits (139), Expect(2) = 2e-031
Identities = 24/34 (70%), Positives = 32/34 (94%)
Frame = +1 / +1
Query: 118 SKWSVIASRLPGRTDNDVKNYWNTKLKKRYLASS 219
++WS+IAS++ GRTDNDVKN+WNTKLKKR LA++
Sbjct: 1861 ARWSLIASQMEGRTDNDVKNHWNTKLKKRLLAAA 1962
>gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 135 bits (290), Expect = 9e-031
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ + G+KWS+IA RLPGRTDN++KNY
Sbjct: 363 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKFHELFGNKWSLIAGRLPGRTDNEIKNY 542
Query: 181 WNTKLKKRYLASST 222
WNT +K++ LA T
Sbjct: 543 WNTHIKRKLLARGT 584
>gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191287, DNA
sequence
Length = 618
Score = 135 bits (289), Expect = 1e-030
Identities = 48/68 (70%), Positives = 60/68 (88%)
Frame = +1 / -2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+HG FTD E+ I+ L+ +G++WSVIA++LPGRTDNDVKN+
Sbjct: 329 RCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNH 150
Query: 181 WNTKLKKR 204
WNTKLKK+
Sbjct: 149 WNTKLKKK 126
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial
cds
Length = 2020
Score = 135 bits (289), Expect = 1e-030
Identities = 48/68 (70%), Positives = 60/68 (88%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+HG FTD E+ I+ L+ +G++WSVIA++LPGRTDNDVKN+
Sbjct: 1665 RCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNH 1844
Query: 181 WNTKLKKR 204
WNTKLKK+
Sbjct: 1845 WNTKLKKK 1868
>gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_A11_A002 5', mRNA sequence
Length = 780
Score = 134 bits (288), Expect(2) = 2e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 339 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 518
Query: 181 WNTKLKKRYLA 213
WNT ++++ L+
Sbjct: 519 WNTHIRRKLLS 551
Score = 22.6 bits (43), Expect(2) = 2e-030
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +2 / +1
Query: 563 PRLAAAQVAAPCGPRTCMAQRCCPNPPAAA 652
PR+ ++ APC +R PP +A
Sbjct: 631 PRVTVRRIRAPCSGWRSTTRRRRRRPPRSA 720
>gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_50_F06_A012 5', mRNA sequence
Length = 674
Score = 134 bits (288), Expect = 2e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 368 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 547
Query: 181 WNTKLKKRYLA 213
WNT ++++ L+
Sbjct: 548 WNTHIRRKLLS 580
>gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E12_A002 5', mRNA sequence
Length = 608
Score = 134 bits (288), Expect = 2e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 255 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 434
Query: 181 WNTKLKKRYLA 213
WNT ++++ L+
Sbjct: 435 WNTHIRRKLLS 467
>gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_F09_A002 5', mRNA sequence
Length = 439
Score = 133 bits (286), Expect = 3e-030
Identities = 47/61 (77%), Positives = 57/61 (93%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP ++HGGF++EED +ILSLY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 257 RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNY 436
Query: 181 W 183
W
Sbjct: 437 W 439
>gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_17_F02_A012 5', mRNA sequence
Length = 595
Score = 133 bits (285), Expect = 4e-030
Identities = 46/71 (64%), Positives = 61/71 (85%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 371 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 550
Query: 181 WNTKLKKRYLA 213
WNT + ++ L+
Sbjct: 551 WNTHIXRKLLS 583
>gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_B10_A002 5', mRNA sequence
Length = 564
Score = 132 bits (282), Expect = 1e-029
Identities = 45/67 (67%), Positives = 59/67 (88%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 362 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 541
Query: 181 WNTKLKK 201
WNT +++
Sbjct: 542 WNTHIRR 562
>gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_54_C12_A012 5', mRNA sequence
Length = 709
Score = 131 bits (281), Expect = 2e-029
Identities = 45/70 (64%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT +ED LI+ L+ +G+KWS+IA+RLPGRTDN++KNY
Sbjct: 245 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNY 424
Query: 181 WNTKLKKRYL 210
WNT ++++ L
Sbjct: 425 WNTHIRRKLL 454
>gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_F10_A002 5', mRNA sequence
Length = 949
Score = 131 bits (281), Expect = 2e-029
Identities = 45/70 (64%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT +ED LI+ L+ +G+KWS+IA+RLPGRTDN++KNY
Sbjct: 239 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNY 418
Query: 181 WNTKLKKRYL 210
WNT ++++ L
Sbjct: 419 WNTHIRRKLL 448
>gb|CW268204.1|CW268204 104_738_11401152_148_35300_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401152, DNA
sequence
Length = 696
Score = 88.1 bits (186), Expect(2) = 2e-029
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASR 144
RCGKSCRLRWLNYLRP ++HGGF++EED +ILSLY IGS+ S + R
Sbjct: 88 RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR*SSVGRR 231
Score = 65.2 bits (136), Expect(2) = 2e-029
Identities = 21/28 (75%), Positives = 28/28 (100%)
Frame = +1 / +3
Query: 121 KWSVIASRLPGRTDNDVKNYWNTKLKKR 204
+WS+IA++LPGRTDND+KNYWNT+LKK+
Sbjct: 375 RWSIIAAQLPGRTDNDIKNYWNTRLKKK 458
>gb|CW078375.1|CW078375 104_392_10896644_148_31925_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896644, DNA
sequence
Length = 728
Score = 88.1 bits (186), Expect(2) = 3e-029
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASR 144
RCGKSCRLRWLNYLRP ++HGGF++EED +ILSLY IGS+ S + R
Sbjct: 129 RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR*SSVGRR 272
Score = 65.2 bits (136), Expect(2) = 3e-029
Identities = 21/28 (75%), Positives = 28/28 (100%)
Frame = +1 / +2
Query: 121 KWSVIASRLPGRTDNDVKNYWNTKLKKR 204
+WS+IA++LPGRTDND+KNYWNT+LKK+
Sbjct: 416 RWSIIAAQLPGRTDNDIKNYWNTRLKKK 499
>gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb86) gene, partial cds
Length = 752
Score = 88.1 bits (186), Expect(2) = 3e-029
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASR 144
RCGKSCRLRWLNYLRP ++HGGF++EED +ILSLY IGS+ S + R
Sbjct: 257 RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR*SSVGRR 400
Score = 65.2 bits (136), Expect(2) = 3e-029
Identities = 21/28 (75%), Positives = 28/28 (100%)
Frame = +1 / +1
Query: 121 KWSVIASRLPGRTDNDVKNYWNTKLKKR 204
+WS+IA++LPGRTDND+KNYWNT+LKK+
Sbjct: 544 RWSIIAAQLPGRTDNDIKNYWNTRLKKK 627
>gb|CW323046.1|CW323046 104_817_11476426_116_35958_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476426, DNA
sequence
Length = 674
Score = 81.7 bits (172), Expect(2) = 4e-029
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRL 147
RCGKSCRLRWLNYLRP ++HG FT+EE+ +I SLY IGS+ + A L
Sbjct: 35 RCGKSCRLRWLNYLRPNIKHGDFTEEEEHIICSLYISIGSR*EISAQYL 181
Score = 70.7 bits (148), Expect(2) = 4e-029
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 121 KWSVIASRLPGRTDNDVKNYWNTKLKKRYLASSTSTGEAR 240
+WS+IA++LPGRTDND+KNYWNTKLKK+ L + AR
Sbjct: 397 RWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKRAPSRRAR 516
>gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019d03, DNA
sequence
Length = 471
Score = 129 bits (277), Expect = 6e-029
Identities = 45/71 (63%), Positives = 61/71 (85%)
Frame = +1 / -2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+++ G FTD+E+ LI+ L+ +G+KWS IA++LPGRTDN++KNY
Sbjct: 239 RCGKSCRLRWTNYLRPDIKRGRFTDDEEKLIIHLHSLLGNKWSSIATKLPGRTDNEIKNY 60
Query: 181 WNTKLKKRYLA 213
WNT L+K+ L+
Sbjct: 59 WNTHLRKKLLS 27
>gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb20) gene, partial
cds
Length = 2328
Score = 88.1 bits (186), Expect(2) = 8e-029
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASR 144
RCGKSCRLRWLNYLRP ++HGGF++EED +ILSLY IGS+ S + R
Sbjct: 1835 RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR*SSVGRR 1978
Score = 65.2 bits (136), Expect(2) = 8e-029
Identities = 21/28 (75%), Positives = 28/28 (100%)
Frame = +1 / +1
Query: 121 KWSVIASRLPGRTDNDVKNYWNTKLKKR 204
+WS+IA++LPGRTDND+KNYWNT+LKK+
Sbjct: 2122 RWSIIAAQLPGRTDNDIKNYWNTRLKKK 2205
>gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A08_A002 5', mRNA sequence
Length = 876
Score = 127 bits (273), Expect = 2e-028
Identities = 46/76 (60%), Positives = 62/76 (81%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP++R G FT EE+ LI+SL+ +G++W+ IAS LPGRTDN++KNY
Sbjct: 312 RCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHAIVGNRWAHIASHLPGRTDNEIKNY 491
Query: 181 WNTKLKKRYLASSTST 228
WN+ +KK+ + ST
Sbjct: 492 WNSWIKKKIRKPAMST 539
>gb|CW188235.1|CW188235 104_608_11172922_116_36732_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172922, DNA
sequence
Length = 524
Score = 78.5 bits (165), Expect(2) = 6e-028
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWS 129
RCG SCRLRWLNYLRP ++HG FT +EDSLI SLY IGS ++
Sbjct: 73 RCG*SCRLRWLNYLRPNIKHGDFTPQEDSLICSLYISIGSMYT 201
Score = 69.8 bits (146), Expect(2) = 6e-028
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1 / +1
Query: 112 IGSKWSVIASRLPGRTDNDVKNYWNTKLKKRYL 210
I S+WS+IA++LPGRTDNDVKNYWNTKL KR L
Sbjct: 340 IMSRWSIIAAQLPGRTDNDVKNYWNTKLNKRLL 438
>gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124g17, DNA
sequence
Length = 613
Score = 124 bits (266), Expect = 2e-027
Identities = 42/72 (58%), Positives = 61/72 (84%)
Frame = +1 / -2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+ G ++EE++L++ L+ ++G++WS IA+RLPGRTDN++KN+
Sbjct: 216 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 37
Query: 181 WNTKLKKRYLAS 216
WNT +KK+ S
Sbjct: 36 WNTHIKKKLTVS 1
>gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280l06, DNA
sequence
Length = 400
Score = 124 bits (266), Expect = 2e-027
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RC KSCRLRW NYLRP +R GGF+D ED LI+ L +G++W+ IAS LP RTDNDVKNY
Sbjct: 43 RCSKSCRLRWTNYLRPGIRRGGFSDHEDRLIVHLQALLGNRWAAIASYLPDRTDNDVKNY 222
Query: 181 WNTKLKKRYL 210
WNT LKK+ L
Sbjct: 223 WNTHLKKKLL 252
>gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_G12_A002 5', mRNA sequence
Length = 748
Score = 124 bits (266), Expect = 2e-027
Identities = 44/68 (64%), Positives = 59/68 (86%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ EE+ LI+ L+ +G+KWS IA++LPGRTDN+VKN+
Sbjct: 295 RCGKSCRLRWINYLRPDLKRGTFSQEEEDLIIHLHSLLGNKWSQIAAQLPGRTDNEVKNF 474
Query: 181 WNTKLKKR 204
WN+ +KKR
Sbjct: 475 WNSYIKKR 498
>gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 59/68 (86%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 321 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 500
Query: 181 WNTKLKKR 204
W+T LKKR
Sbjct: 501 WHTHLKKR 524
>gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 124 bits (265), Expect = 3e-027
Identities = 43/68 (63%), Positives = 59/68 (86%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ EE+ LI+ L+ +G+KWS IA++LPGRTDN+VKN+
Sbjct: 84 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSMMGNKWSQIATQLPGRTDNEVKNF 263
Query: 181 WNTKLKKR 204
WN+ +KK+
Sbjct: 264 WNSYIKKK 287
>gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 59/68 (86%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 77 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 256
Query: 181 WNTKLKKR 204
W+T LKKR
Sbjct: 257 WHTHLKKR 280
>gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 59/68 (86%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 77 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 256
Query: 181 WNTKLKKR 204
W+T LKKR
Sbjct: 257 WHTHLKKR 280
>gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_70_D11_A012 5', mRNA sequence
Length = 593
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 59/68 (86%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 334 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 513
Query: 181 WNTKLKKR 204
W+T LKKR
Sbjct: 514 WHTHLKKR 537
>gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 5', mRNA sequence
Length = 665
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 58/68 (85%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ EE+ LI+ L+ +G++WS IA+RLPGRTDN++KN
Sbjct: 317 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNL 496
Query: 181 WNTKLKKR 204
WN+ +KK+
Sbjct: 497 WNSSIKKK 520
>gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_F05_A002 5', mRNA sequence
Length = 628
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 59/68 (86%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 346 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 525
Query: 181 WNTKLKKR 204
W+T LKKR
Sbjct: 526 WHTHLKKR 549
>gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D11_A002 5', mRNA sequence
Length = 767
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 59/68 (86%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 334 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 513
Query: 181 WNTKLKKR 204
W+T LKKR
Sbjct: 514 WDTHLKKR 537
>gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F03_A002 5', mRNA sequence
Length = 586
Score = 124 bits (265), Expect = 3e-027
Identities = 41/70 (58%), Positives = 60/70 (85%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+ G TD E+ +++ L+G++G++WS IA++LPGRTDN++KN+
Sbjct: 317 RCGKSCRLRWTNYLRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNH 496
Query: 181 WNTKLKKRYL 210
WNT +KK+ +
Sbjct: 497 WNTHIKKKLI 526
>gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 5', mRNA sequence
Length = 831
Score = 124 bits (265), Expect = 3e-027
Identities = 42/68 (61%), Positives = 58/68 (85%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ EE+ LI+ L+ +G++WS IA+RLPGRTDN++KN
Sbjct: 409 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNL 588
Query: 181 WNTKLKKR 204
WN+ +KK+
Sbjct: 589 WNSSIKKK 612
>gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506824, DNA
sequence
Length = 625
Score = 123 bits (264), Expect = 4e-027
Identities = 41/68 (60%), Positives = 60/68 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+ G ++EE++L++ L+ ++G++WS IA+RLPGRTDN++KN+
Sbjct: 76 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 255
Query: 181 WNTKLKKR 204
WNT +KK+
Sbjct: 256 WNTHIKKK 279
>gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194554, DNA
sequence
Length = 615
Score = 123 bits (264), Expect = 4e-027
Identities = 41/68 (60%), Positives = 60/68 (88%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+ G ++EE++L++ L+ ++G++WS IA+RLPGRTDN++KN+
Sbjct: 249 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 428
Query: 181 WNTKLKKR 204
WNT +KK+
Sbjct: 429 WNTHIKKK 452
>gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401724, DNA
sequence
Length = 658
Score = 123 bits (264), Expect = 4e-027
Identities = 41/68 (60%), Positives = 60/68 (88%)
Frame = +1 / -3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW NYLRP+L+ G ++EE++L++ L+ ++G++WS IA+RLPGRTDN++KN+
Sbjct: 581 RCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNH 402
Query: 181 WNTKLKKR 204
WNT +KK+
Sbjct: 401 WNTHIKKK 378
>gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_A06_A002 5', mRNA sequence
Length = 771
Score = 123 bits (263), Expect = 5e-027
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW +YLRP+++ G FT EE+ IL L+ +G+KWS IA LPGRTDN++KN+
Sbjct: 242 RCGKSCRLRWTSYLRPDIKRGKFTQEEEQTILQLHSVLGNKWSAIAKHLPGRTDNEIKNF 421
Query: 181 WNTKLKKRYL 210
WNT LKK+ +
Sbjct: 422 WNTHLKKKLI 451
>gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B09_A007 5', mRNA sequence
Length = 592
Score = 121 bits (259), Expect = 2e-026
Identities = 41/68 (60%), Positives = 58/68 (85%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 336 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 515
Query: 181 WNTKLKKR 204
W+T L KR
Sbjct: 516 WHTHLXKR 539
>gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H01_A002 5', mRNA sequence
Length = 808
Score = 120 bits (257), Expect = 3e-026
Identities = 42/69 (60%), Positives = 56/69 (81%)
Frame = +1 / +2
Query: 4 CGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNYW 183
CGKSCRLRW NYLRP+++ G F+ EE+ IL L+ +G+KWS IA+ LPGRTD+++KN+W
Sbjct: 305 CGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSVLGNKWSAIATHLPGRTDDEIKNFW 484
Query: 184 NTKLKKRYL 210
NT LKKR +
Sbjct: 485 NTHLKKRLI 511
>gb|CW501261.1|CW501261 fsbb001f296p22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f296p22, DNA
sequence
Length = 524
Score = 74.4 bits (156), Expect(2) = 5e-026
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +1 / -2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSK 123
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ + G+K
Sbjct: 448 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKFHELFGNK 326
Score = 65.2 bits (136), Expect(2) = 5e-026
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +1 / -2
Query: 121 KWSVIASRLPGRTDNDVKNYWNTKLKKRYLASST 222
+WS+IA RLPGRTDN++KNYWNT +K++ LA T
Sbjct: 235 RWSLIAGRLPGRTDNEIKNYWNTHIKRKLLARGT 134
>gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 119 bits (255), Expect = 6e-026
Identities = 40/68 (58%), Positives = 58/68 (85%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ +E+ LI+ L+ +G++WS IA++LPGRTDN++KN
Sbjct: 209 RCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 388
Query: 181 WNTKLKKR 204
WN+ +KK+
Sbjct: 389 WNSCIKKK 412
>gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 119 bits (255), Expect = 6e-026
Identities = 40/68 (58%), Positives = 58/68 (85%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ +E+ LI+ L+ +G++WS IA++LPGRTDN++KN
Sbjct: 78 RCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 257
Query: 181 WNTKLKKR 204
WN+ +KK+
Sbjct: 258 WNSCIKKK 281
>gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_D02_A002 5', mRNA sequence
Length = 551
Score = 119 bits (255), Expect = 6e-026
Identities = 40/66 (60%), Positives = 57/66 (86%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+++ G F+ EE+ I++L+ ++G++WS IA+RLPGRTDN++KN
Sbjct: 353 RCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNV 532
Query: 181 WNTKLK 198
W+T LK
Sbjct: 533 WHTHLK 550
>gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence
Length = 745
Score = 119 bits (255), Expect = 6e-026
Identities = 40/68 (58%), Positives = 58/68 (85%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ +E+ LI+ L+ +G++WS IA++LPGRTDN++KN
Sbjct: 384 RCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 563
Query: 181 WNTKLKKR 204
WN+ +KK+
Sbjct: 564 WNSCIKKK 587
>gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_H11_A012 5', mRNA sequence
Length = 650
Score = 119 bits (254), Expect = 8e-026
Identities = 41/68 (60%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F+ +E+ I+ L+ +G++WS IAS LPGRTDN++KN+
Sbjct: 316 RCGKSCRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNF 495
Query: 181 WNTKLKKR 204
WN+ LKK+
Sbjct: 496 WNSCLKKK 519
>gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_H10_A002 5', mRNA sequence
Length = 671
Score = 119 bits (254), Expect = 8e-026
Identities = 44/79 (55%), Positives = 61/79 (77%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
R GKSCRLRW+NYLRP L+ G F+ EE+ +I++L ++G+KWS IA LPGRTDN+VKNY
Sbjct: 221 RNGKSCRLRWINYLRPGLKRGMFSQEEEDVIINLQAKLGNKWSQIAMHLPGRTDNEVKNY 400
Query: 181 WNTKLKKRYLASSTSTGEA 237
WN+ LKKR + + ++ +
Sbjct: 401 WNSYLKKRVMQAQGASSNS 457
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 990,114,317
Number of Sequences: 832831
Number of extensions: 13183364
Number of successful extensions: 189419
Number of sequences better than 1.0e-020: 174
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 33978485088
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)