TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010496.2.1
(1046 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD220536.1|CD220536 CCC1_67_H06.g1_A007 Callus culture/c... 272 e-106
gb|CW216644.1|CW216644 104_649_11195227_116_37125_072 Sorgh... 191 1e-089
gb|CW269890.1|CW269890 104_741_11402081_116_35322_075 Sorgh... 145 2e-088
gb|CX617846.1|CX617846 GABR1_36_D11.b1_A002 GA- or brassino... 294 1e-085
gb|CX619537.1|CX619537 GABR1_46_D02.b1_A002 GA- or brassino... 288 7e-084
gb|CX611325.1|CX611325 ANR1_24_B05.b1_A002 Anaerobic roots ... 284 3e-082
gb|CX613114.1|CX613114 GABR1_6_G11.b1_A002 GA- or brassinol... 281 4e-081
gb|BE357367.1|BE357367 DG1_148_A07.g1_A002 Dark Grown 1 (DG... 269 3e-078
gb|CW451021.1|CW451021 fsbb001f189o18k0 Sorghum methylation... 202 2e-077
gb|CN134485.1|CN134485 OX1_26_D08.g1_A002 Oxidatively-stres... 263 6e-076
gb|BF481389.1|BF481389 FM1_18_E02.b1_A003 Floral-Induced Me... 235 5e-074
gb|CF071078.1|CF071078 FE1_15_D12.b1_A002 Iron-deficient se... 196 1e-073
gb|CW164355.1|CW164355 104_572_11151945_116_36461_041 Sorgh... 148 1e-068
gb|CW230233.1|CW230233 104_671_11207740_116_37270_002 Sorgh... 148 1e-068
gb|CD220430.1|CD220430 CCC1_67_H06.b1_A007 Callus culture/c... 226 4e-066
gb|AW746192.1|AW746192 WS1_40_A04.b1_A002 Water-stressed 1 ... 239 7e-064
gb|CW164356.1|CW164356 104_572_11151945_148_36462_041 Sorgh... 219 2e-063
gb|CW022238.1|CW022238 104_161_10431724_1_30006 Sorghum met... 219 2e-063
gb|CW236952.1|CW236952 104_693_11215895_148_37519_094 Sorgh... 219 2e-063
gb|CW388822.1|CW388822 fsbb001f073l23f0 Sorghum methylation... 219 2e-063
gb|CL175875.1|CL175875 104_381_10892754_116_31765_354 Sorgh... 162 3e-063
gb|CW163891.1|CW163891 104_571_11151698_116_36456_003 Sorgh... 160 3e-062
gb|CD220687.1|CD220687 CCC1_68_E02.g1_A007 Callus culture/c... 172 4e-059
gb|CW407797.1|CW407797 fsbb001f101g18f0 Sorghum methylation... 160 2e-058
gb|CX616301.1|CX616301 GABR1_27_D03.b1_A002 GA- or brassino... 200 8e-058
gb|CW159691.1|CW159691 104_566_11149490_148_36423_015 Sorgh... 160 5e-057
gb|CD205740.1|CD205740 HS1_18_E08.b1_A012 Heat-shocked seed... 197 5e-057
gb|BZ338704.1|BZ338704 ia97c08.g1 WGS-SbicolorF (JM107 adap... 136 1e-054
gb|AW745132.1|AW745132 LG1_386_A11.g1_A002 Light Grown 1 (L... 173 4e-044
gb|CW459444.1|CW459444 fsbb001f206d04f0 Sorghum methylation... 133 6e-043
gb|CW407798.1|CW407798 fsbb001f101g18k0 Sorghum methylation... 160 2e-040
gb|CW212992.1|CW212992 104_644_11191313_116_37026_073 Sorgh... 160 2e-040
gb|CN124667.1|CN124667 RHOH1_6_E05.b1_A002 Acid- and alkali... 159 8e-040
gb|BG048182.1|BG048182 OV1_28_F10.g1_A002 Ovary 1 (OV1) Sor... 155 1e-038
gb|CW050340.1|CW050340 104_290_10514603_115_30205 Sorghum m... 122 3e-032
gb|CF071090.1|CF071090 FE1_15_F06.b1_A002 Iron-deficient se... 128 9e-031
gb|BI351334.1|BI351334 IP1_70_C06.b1_A002 Immature pannicle... 111 9e-031
gb|BG054019.1|BG054019 OV2_1_C08.g1_A002 Ovary 2 (OV2) Sorg... 126 6e-030
gb|CL175876.1|CL175876 104_381_10892754_148_31764_354 Sorgh... 122 5e-029
gb|BG101880.1|BG101880 RHIZ2_23_E10.g1_A003 Rhizome2 (RHIZ2... 122 7e-029
gb|BF481319.1|BF481319 FM1_18_E02.g1_A003 Floral-Induced Me... 122 7e-029
gb|CX611534.1|CX611534 ANR1_25_E10.b1_A002 Anaerobic roots ... 104 2e-028
gb|CW230234.1|CW230234 104_671_11207740_148_37266_002 Sorgh... 126 5e-028
gb|CW214645.1|CW214645 104_646_11194123_148_37054_070 Sorgh... 76 9e-027
gb|DR831463.2|DR831463 MM79 Sorghum bicolor greenbug-respon... 115 1e-026
gb|BG948189.1|BG948189 IP1_10_D12.g1_A002 Immature pannicle... 113 3e-026
gb|CW451552.1|CW451552 fsbb001f191k19f0 Sorghum methylation... 76 6e-026
gb|CW091140.1|CW091140 104_451_10997705_116_32541_033 Sorgh... 105 5e-025
gb|BG047859.1|BG047859 OV1_28_F10.b1_A002 Ovary 1 (OV1) Sor... 75 6e-025
gb|CW022239.1|CW022239 104_161_10431724_5_30007 Sorghum met... 86 2e-024
gb|BI141124.1|BI141124 IP1_43_D11.b1_A002 Immature pannicle... 75 8e-024
gb|AW671661.1|AW671661 LG1_349_G09.b1_A002 Light Grown 1 (L... 111 1e-023
gb|CW484465.1|CW484465 fsbb001f246j24f0 Sorghum methylation... 86 1e-023
gb|CW269733.1|CW269733 104_740_11401967_148_36230_082 Sorgh... 75 7e-023
gb|CW269732.1|CW269732 104_740_11401967_148_35316_082 Sorgh... 75 7e-023
gb|CL182230.1|CL182230 104_393_10897285_116_31922_277 Sorgh... 79 7e-023
gb|CW197933.1|CW197933 104_622_11181944_148_36827_024 Sorgh... 68 1e-021
gb|CW197932.1|CW197932 104_622_11181944_116_36828_024 Sorgh... 68 1e-021
gb|CW113155.1|CW113155 104_487_11105287_148_34549_026 Sorgh... 68 1e-021
gb|BG357605.1|BG357605 OV2_32_A05.g1_A002 Ovary 2 (OV2) Sor... 80 4e-021
gb|BG356818.1|BG356818 OV2_10_D04.g1_A002 Ovary 2 (OV2) Sor... 80 4e-021
gb|BG273330.1|BG273330 OV2_27_A07.g1_A002 Ovary 2 (OV2) Sor... 80 4e-021
gb|BG241200.1|BG241200 OV1_39_D08.b1_A002 Ovary 1 (OV1) Sor... 80 4e-021
>gb|CD220536.1|CD220536 CCC1_67_H06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_H06_A007 5', mRNA sequence
Length = 645
Score = 272 bits (589), Expect(2) = e-106
Identities = 103/109 (94%), Positives = 107/109 (98%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGMALFNHG+GQPLQYVVANSF+AALYADYMEAVNVPGWYCGPNFMTTNDLREFA+SQI
Sbjct: 317 KGGMALFNHGKGQPLQYVVANSFIAALYADYMEAVNVPGWYCGPNFMTTNDLREFAKSQI 496
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRD 421
NYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGY WRD
Sbjct: 497 NYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYXWRD 643
Score = 217 bits (468), Expect(2) = 2e-079
Identities = 90/108 (83%), Positives = 90/108 (83%)
Frame = +2 / -1
Query: 422 SRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLPNPTT*LIFLGLSPRM*LI*DLANSRRSL 601
SRH *PPVHEYLTPL GVDAPRWC CRGY LP PTT*LIFLGLSPRM*LI*D ANSRRSL
Sbjct: 642 SRHX*PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLGLSPRM*LI*DFANSRRSL 463
Query: 602 VVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
VVMKFGPQY PGTLT KELATTYCSGCPLPWLKSAIPP
Sbjct: 462 VVMKFGPQYHPGTLTASM*SA*SAAMKELATTYCSGCPLPWLKSAIPP 319
Score = 204 bits (439), Expect(3) = 6e-071
Identities = 90/109 (82%), Positives = 97/109 (88%)
Frame = +1 / -3
Query: 421 VAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVVTENVVDLRPGELTEVV 600
V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVVT+NVVDLR EL EVV
Sbjct: 643 VSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVVTKNVVDLRLCELPEVV 464
Query: 601 GGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
G HEVW AVP+GDVD LHVVGVER ++GVGDDVLQRLP AVVEERHP+L
Sbjct: 463 GCHEVWPAVPSGDVDCLHVVGVERGDEGVGDDVLQRLPLAVVEERHPSL 317
Score = 151 bits (325), Expect(2) = 2e-044
Identities = 66/101 (65%), Positives = 71/101 (70%)
Frame = -2 / +1
Query: 775 PGFAAFNFTXGRDGALXXXXXXXXXXXXXQLLSRCALRRLHGGRQRPRLVLRSKLHDHQR 596
P GRDGAL QLL R ALRRLHGG QRPR+VLR+KLHD+QR
Sbjct: 289 PALRLLQLHQGRDGALQPRQGAAAAVRRRQLLHRRALRRLHGGSQRPRMVLRAKLHDNQR 468
Query: 595 PP*VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
PP VR+VSDQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 469 PPGVRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 591
Score = 133 bits (286), Expect(2) = e-106
Identities = 55/77 (71%), Positives = 56/77 (72%)
Frame = -2 / +2
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK NILDF VFSW LPGAQ RMFLNPGYPY SL GYHNATSL
Sbjct: 92 TDPRLPKNAKAFFNILDFSVFSWDNKLPGAQLLLSRLRMFLNPGYPYEESLIGYHNATSL 271
Query: 793 NMCMYFPGFAAFNFTXG 743
NMCMYFP F +FNFT G
Sbjct: 272 NMCMYFPRFGSFNFTKG 322
Score = 101 bits (216), Expect(3) = 8e-031
Identities = 40/48 (83%), Positives = 41/48 (85%)
Frame = +3 / -2
Query: 474 WTRHGGARAVGTCCRTQPRSSSSWGCHRECS*SETWRTHGGRWWS*SL 617
WTRHGGA A GT CR QPRSSSSWGCH+ECS*SET RT GGRW S*SL
Sbjct: 590 WTRHGGAGAAGTFCRNQPRSSSSWGCHQECS*SETLRTPGGRWLS*SL 447
Score = 101 bits (215), Expect(2) = 2e-079
Identities = 48/75 (64%), Positives = 48/75 (64%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLK K GKYMHMLRLVALW*P S SYG*PGLRNM QLNT KSR
Sbjct: 315 VKLKEPKRGKYMHMLRLVALW*PMSDSSYG*PGLRNMRSRDSSSCAPGSLLSQLNTEKSR 136
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 135 MLKKALAFLGSRGSV 91
Score = 101 bits (215), Expect(3) = 5e-032
Identities = 49/85 (57%), Positives = 49/85 (57%)
Frame = -1 / +3
Query: 746 RAGWRSSTTAGGSRCSTSSPTPFXXXXXXXXXXXXXXPAGTAVQXXXXXXXXXXXPGLRS 567
R GWRSSTTA GSRCSTSSPTP P GTA Q LRS
Sbjct: 318 REGWRSSTTARGSRCSTSSPTPSSPRSTPTTWRQSTSPDGTAGQTS*QPTTSGSSQSLRS 497
Query: 566 TTFSVTTPRR*ATWLGSAASTHGTC 492
TTF VTTPRR*ATWL SA ST GTC
Sbjct: 498 TTFLVTTPRR*ATWLVSAKSTRGTC 572
Score = 66.6 bits (139), Expect(3) = 6e-071
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = +2 / -3
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
QPRQQQL AREL PAEH EVEDV LGVLGQP VG
Sbjct: 202 QPRQQQLRARELVVPAEHREVEDVEEGLGVLGQPRVG 92
Score = 49.6 bits (102), Expect(2) = 2e-044
Identities = 21/40 (52%), Positives = 21/40 (52%)
Frame = -3 / +3
Query: 984 SXXXPTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
S PT GCP TPR SAG SSRA SCC RG
Sbjct: 81 SASPPTRGCPRTPRPSSTSSTSRCSAGTTSSRARSCCCRG 200
Score = 45.5 bits (93), Expect(3) = 8e-031
Identities = 20/41 (48%), Positives = 20/41 (48%)
Frame = +1 / -2
Query: 850 *GTCXXXXXXXXXXXXXXXS*TXRSRGC*XXPWRXWAAXXR 972
*GTC S*T RSRGC* PWR WAA R
Sbjct: 215 *GTCAAATAAAARPGACCPS*TPRSRGC*RRPWRSWAAAGR 93
Score = 39.6 bits (80), Expect(3) = 5e-032
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQPQHVHVL LR LQLH
Sbjct: 262 HQPQHVHVLPALRLLQLH 315
Score = 38.2 bits (77), Expect(3) = 6e-071
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1 / -2
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*R RS STCTC*GWW
Sbjct: 314 *S*RSRSAGSTCTC*GWW 261
Score = 36.8 bits (74), Expect(3) = 5e-032
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -1 / +1
Query: 971 RXXAAQXRQGXXQHPRLLXVQL 906
R AAQ RQG QHPRLL VQL
Sbjct: 94 RPAAAQERQGLLQHPRLLGVQL 159
Score = 26.3 bits (51), Expect(3) = 8e-031
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / -3
Query: 713 PLPWLKSAIPPXGEVEGGEARK 778
PL ++ P GEVEG EAR+
Sbjct: 352 PLAVVEERHPSLGEVEGAEARE 287
>gb|CW216644.1|CW216644 104_649_11195227_116_37125_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195227, DNA
sequence
Length = 666
Score = 191 bits (411), Expect(3) = 1e-089
Identities = 73/93 (78%), Positives = 81/93 (87%)
Frame = -3 / +1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNP+KMSYVVGFG+KYPRHVHHRGASTPH+ VKYSCTGGYKWRDSKKADPN++
Sbjct: 373 QLNYILGDNPRKMSYVVGFGNKYPRHVHHRGASTPHSRVKYSCTGGYKWRDSKKADPNVI 552
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
GAMVGGPD+ND F DSR G+T GNAG
Sbjct: 553 TGAMVGGPDRNDRFNDSRMAFGQTEPTLVGNAG 651
Score = 158 bits (340), Expect(4) = 5e-067
Identities = 66/82 (80%), Positives = 69/82 (84%)
Frame = +2 / -2
Query: 323 VLPEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCR 502
V P+ +RESL S SGPPT+AP GSAFLLSRHL PPVHEYLT LCGVDAPRWCTCR
Sbjct: 623 VCPKAMRESLNLSLRSGPPTIAPVITFGSAFLLSRHLYPPVHEYLTRLCGVDAPRWCTCR 444
Query: 503 GYLLPNPTT*LIFLGLSPRM*L 568
GYLLP PTT*LIFLGLSPRM*L
Sbjct: 443 GYLLPKPTT*LIFLGLSPRM*L 378
Score = 136 bits (292), Expect(3) = 1e-089
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
+GG+ALFNHGRGQPLQYVVANSFLAAL+ADYMEA+NVPGWYCGPNFM T DLR FA+SQ+
Sbjct: 77 RGGLALFNHGRGQPLQYVVANSFLAALFADYMEAINVPGWYCGPNFMPTQDLRAFAKSQV 256
Score = 102 bits (218), Expect(2) = 9e-044
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +2 / -1
Query: 566 LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
+ *DLAN+RRS V MK GPQY PGTL RKELATTYCSGCPLPWLKSA PP
Sbjct: 258 IT*DLANARRSWVGMKLGPQYHPGTLIASM*SAKRAARKELATTYCSGCPLPWLKSASPP 79
Query: 746 XGEVEGGEARK 778
+++ + RK
Sbjct: 78 LVKLKAPKRRK 46
Score = 101 bits (215), Expect(4) = 5e-067
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = +1 / -3
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPA 744
LR GE TEV+GGHEV VP GDVD LHVVG E E+GVGD VLQRLPPAVVEER PA
Sbjct: 253 LRLGERTEVLGGHEVGATVPPGDVDRLHVVGEEGGEEGVGDHVLQRLPPAVVEERQPA 80
Score = 96.4 bits (204), Expect(2) = 9e-044
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PA H V VR LAVAPLV AGARVLDA VRR RA VVHVP VL AE +HVAHL VV
Sbjct: 573 PAHHRARDHVRVRLLAVAPLVPAGARVLDAAVRRRRAPVVHVPRVLVAEAHHVAHLPRVV 394
Query: 553 TENVVDL 573
+NVV+L
Sbjct: 393 PKNVVEL 373
Score = 69.3 bits (145), Expect(3) = 3e-022
Identities = 36/76 (47%), Positives = 38/76 (50%)
Frame = -2 / +1
Query: 799 SLNMCMYFPGFAAFNFTXGRDGALXXXXXXXXXXXXXQLLSRCALRRLHGGRQRPRLVLR 620
SL P GR GAL QLL R LRRLHGG QRPR+VL
Sbjct: 25 SLGHVQVLPALRGLQLHQGRAGALQPRQGAAAAVRGRQLLPRRPLRRLHGGDQRPRVVLW 204
Query: 619 SKLHDHQRPP*VRQVS 572
+LH H RPP VRQVS
Sbjct: 205 PQLHAHPRPPCVRQVS 252
Score = 57.0 bits (118), Expect(3) = 3e-022
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / +3
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAPPWRV 476
QLHS QP+EDELRG +RQQVP ARAPP RV
Sbjct: 378 QLHSWGQPEEDELRGGLRQQVPAARAPPGRV 470
Score = 43.7 bits (89), Expect(3) = 1e-089
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 823 LAGYHNATSLNMCMYFPGFAAFNFTXG 743
L GYH + L+MC YF F AFNFT G
Sbjct: 2 LVGYHKESRLDMCKYFRRFGAFNFTRG 82
Score = 35.9 bits (72), Expect(4) = 5e-067
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*P 818
VKLKA K KY+HM + ++LW*P
Sbjct: 75 VKLKAPKRRKYLHMSKRLSLW*P 7
Score = 22.6 bits (43), Expect(4) = 5e-067
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGS CPK
Sbjct: 638 TSVGSVCPK 612
Score = 22.1 bits (42), Expect(3) = 3e-022
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 334 FGQNEPTLV 308
FGQ EPTLV
Sbjct: 613 FGQTEPTLV 639
>gb|CW269890.1|CW269890 104_741_11402081_116_35322_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402081, DNA
sequence
Length = 645
Score = 145 bits (311), Expect(3) = 2e-088
Identities = 53/59 (89%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNL 397
Q+NYILGDNP+KMSYVVGFG+KYPRHVHHRGASTPH+ VKYSCTGGYKWRDSKKADPN+
Sbjct: 467 QLNYILGDNPRKMSYVVGFGNKYPRHVHHRGASTPHSRVKYSCTGGYKWRDSKKADPNV 643
Score = 136 bits (292), Expect(3) = 2e-088
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = -3 / +3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
+GG+ALFNHGRGQPLQYVVANSFLAAL+ADYMEA+NVPGWYCGPNFM T DLR FA+SQ+
Sbjct: 171 RGGLALFNHGRGQPLQYVVANSFLAALFADYMEAINVPGWYCGPNFMPTQDLRAFAKSQV 350
Score = 128 bits (274), Expect(3) = 6e-063
Identities = 52/55 (94%), Positives = 52/55 (94%)
Frame = +2 / -1
Query: 404 GSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLPNPTT*LIFLGLSPRM*L 568
GSAFLLSRHL PPVHEYLT LCGVDAPRWCTCRGYLLP PTT*LIFLGLSPRM*L
Sbjct: 636 GSAFLLSRHLYPPVHEYLTRLCGVDAPRWCTCRGYLLPKPTT*LIFLGLSPRM*L 472
Score = 102 bits (218), Expect(3) = 1e-045
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +2 / -3
Query: 566 LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
+ *DLAN+RRS V MK GPQY PGTL RKELATTYCSGCPLPWLKSA PP
Sbjct: 352 IT*DLANARRSWVGMKLGPQYHPGTLIASM*SAKRAARKELATTYCSGCPLPWLKSASPP 173
Query: 746 XGEVEGGEARK 778
+++ + RK
Sbjct: 172 LVKLKAPKRRK 140
Score = 101 bits (215), Expect(3) = 6e-063
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = +1 / -2
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPA 744
LR GE TEV+GGHEV VP GDVD LHVVG E E+GVGD VLQRLPPAVVEER PA
Sbjct: 347 LRLGERTEVLGGHEVGATVPPGDVDRLHVVGEEGGEEGVGDHVLQRLPPAVVEERQPA 174
Score = 90.0 bits (190), Expect(3) = 1e-045
Identities = 43/58 (74%), Positives = 46/58 (79%)
Frame = +1 / -3
Query: 400 VGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVVTENVVDL 573
V VR LAVAPLV AGARVLDA VRR RA VVHVP VL AE +HVAHL VV +NVV+L
Sbjct: 640 VRVRLLAVAPLVPAGARVLDAAVRRRRAPVVHVPRVLVAEAHHVAHLPRVVPKNVVEL 467
Score = 85.8 bits (181), Expect(3) = 2e-088
Identities = 35/58 (60%), Positives = 37/58 (63%)
Frame = -2 / +3
Query: 916 VFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXG 743
VFSW LPGA RMFLNPGYPY SL GYH + L+MC YF F AFNFT G
Sbjct: 3 VFSWDNKLPGAGLLLSRLRMFLNPGYPYEQSLVGYHKESRLDMCKYFRRFGAFNFTRG 176
Score = 69.3 bits (145), Expect(2) = 2e-021
Identities = 36/76 (47%), Positives = 38/76 (50%)
Frame = -2 / +2
Query: 799 SLNMCMYFPGFAAFNFTXGRDGALXXXXXXXXXXXXXQLLSRCALRRLHGGRQRPRLVLR 620
SL P GR GAL QLL R LRRLHGG QRPR+VL
Sbjct: 119 SLGHVQVLPALRGLQLHQGRAGALQPRQGAAAAVRGRQLLPRRPLRRLHGGDQRPRVVLW 298
Query: 619 SKLHDHQRPP*VRQVS 572
+LH H RPP VRQVS
Sbjct: 299 PQLHAHPRPPCVRQVS 346
Score = 57.0 bits (118), Expect(2) = 2e-021
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / +1
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAPPWRV 476
QLHS QP+EDELRG +RQQVP ARAPP RV
Sbjct: 472 QLHSWGQPEEDELRGGLRQQVPAARAPPGRV 564
Score = 56.1 bits (116), Expect(3) = 6e-063
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +3 / -3
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNT 917
VKLKA K KY+HM + ++LW*P S G*PGLRNM QLNT
Sbjct: 169 VKLKAPKRRKYLHMSKRLSLW*PTRDCS*G*PGLRNMRSRDRSRPAPGSLLSQLNT 2
Score = 30.9 bits (61), Expect(3) = 1e-045
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / -2
Query: 863 QPRQQQLGARELXXPAEH 916
QPRQ+Q A EL PAEH
Sbjct: 56 QPRQEQASAGELVVPAEH 3
>gb|CX617846.1|CX617846 GABR1_36_D11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_36_D11_A002 3', mRNA sequence
Length = 720
Score = 294 bits (636), Expect(4) = 1e-085
Identities = 115/137 (83%), Positives = 120/137 (87%)
Frame = -3 / +3
Query: 663 ADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHR 484
ADYMEAVN PGWYCGPNFMTTNDLREFA+SQINYILGDNPKKMSYVVGFG KYPRH+HHR
Sbjct: 3 ADYMEAVNAPGWYCGPNFMTTNDLREFAKSQINYILGDNPKKMSYVVGFGKKYPRHLHHR 182
Query: 483 GASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSG 304
GASTPHNGVKYSCTGGYKWRDSKKADPNLL GAMVGGPD+NDGFKDSRNT G+ G
Sbjct: 183 GASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPDRNDGFKDSRNTFGQNEPTLVG 362
Query: 303 NAGXXXXXXXLTSSGRG 253
NAG LT+SGRG
Sbjct: 363 NAGLVAALVALTNSGRG 413
Score = 226 bits (488), Expect(5) = 3e-068
Identities = 96/106 (90%), Positives = 97/106 (91%)
Frame = +2 / -3
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 337 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 158
Query: 509 LLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLT 646
LP PTT*LIFLGLSPRM*LI*D ANSRRSLVVMKFGPQY PG LT
Sbjct: 157 FLPKPTT*LIFLGLSPRM*LI*DFANSRRSLVVMKFGPQYHPGALT 20
Score = 171 bits (368), Expect(2) = 4e-043
Identities = 77/97 (79%), Positives = 81/97 (83%)
Frame = +1 / -2
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 293 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 114
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVPAGDVDGLHVVG 663
T+NVVDLR EL EVVG HEVW AVP+G VD LHVVG
Sbjct: 113 TKNVVDLRLCELPEVVGCHEVWPAVPSGGVDCLHVVG 3
Score = 133 bits (286), Expect(4) = 8e-053
Identities = 53/64 (82%), Positives = 58/64 (90%)
Frame = -2 / +2
Query: 664 RRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPP 485
RRLHGG QRPR+VLR+KLHD+QRPP VR+VSDQLHS *QPQEDELRGW RQ+VP A APP
Sbjct: 2 RRLHGGSQRPRMVLRAKLHDNQRPPGVRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPP 181
Query: 484 WRVH 473
WRVH
Sbjct: 182 WRVH 193
Score = 57.4 bits (119), Expect(4) = 8e-053
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +2
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 251 EGRPQPADGRHGRRARQERRLQGLAQH 331
Score = 50.6 bits (104), Expect(4) = 8e-053
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +3
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 333 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 473
Score = 34.5 bits (69), Expect(4) = 1e-085
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 410 GSRHYRRRQEHHVLRRAA 463
Score = 33.6 bits (67), Expect(5) = 3e-068
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -3
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 472 GNIGGTAENMVFLSTAV 422
Score = 27.2 bits (53), Expect(5) = 3e-068
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 398 GESHQGRHEAG 366
Score = 25.8 bits (50), Expect(4) = 1e-085
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 464 NVPCRAAAAVVMEAVS 511
Score = 25.8 bits (50), Expect(5) = 3e-068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 358 TSVGSFCPK 332
Score = 25.4 bits (49), Expect(2) = 4e-043
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 449 EHGVLVDGG 423
Score = 24.0 bits (46), Expect(4) = 8e-053
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +2
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 503 AVSATGSASTVVPSFGHTIFGERDR 577
Score = 23.1 bits (44), Expect(5) = 3e-068
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 624 LLTWYCTKEFARVH 583
Score = 22.1 bits (42), Expect(4) = 1e-085
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 573 IADHVRARIL 602
>gb|CX619537.1|CX619537 GABR1_46_D02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_46_D02_A002 3', mRNA sequence
Length = 708
Score = 288 bits (623), Expect(4) = 7e-084
Identities = 113/134 (84%), Positives = 118/134 (88%)
Frame = -3 / +1
Query: 654 MEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGAS 475
MEAVNVPGWYCGPNFMTTNDLREFA+SQINYILGDNPKKMSYVVGFG KYPRH+HHRGAS
Sbjct: 1 MEAVNVPGWYCGPNFMTTNDLREFAKSQINYILGDNPKKMSYVVGFGKKYPRHLHHRGAS 180
Query: 474 TPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
TPHNGVKYSCTGGYKWRDSKKADPNLL GAMVGGPD+NDGFKDSRNT G+ GNAG
Sbjct: 181 TPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAG 360
Query: 294 XXXXXXXLTSSGRG 253
LT+SGRG
Sbjct: 361 LVAALVALTNSGRG 402
Score = 228 bits (493), Expect(5) = 6e-069
Identities = 97/106 (91%), Positives = 98/106 (92%)
Frame = +2 / -2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 326 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 147
Query: 509 LLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLT 646
LP PTT*LIFLGLSPRM*LI*D ANSRRSLVVMKFGPQY PGTLT
Sbjct: 146 FLPKPTT*LIFLGLSPRM*LI*DFANSRRSLVVMKFGPQYHPGTLT 9
Score = 168 bits (361), Expect(2) = 4e-042
Identities = 75/94 (79%), Positives = 79/94 (84%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 282 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 103
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVPAGDVDGLH 654
T+NVVDLR EL EVVG HEVW AVP+GDVD LH
Sbjct: 102 TKNVVDLRLCELPEVVGCHEVWPAVPSGDVDCLH 1
Score = 123 bits (264), Expect(4) = 8e-050
Identities = 49/60 (81%), Positives = 54/60 (90%)
Frame = -2 / +3
Query: 652 GGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
GG QRPR+VLR+KLHD+QRPP VR+VSDQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 3 GGSQRPRMVLRAKLHDNQRPPGVRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 182
Score = 57.4 bits (119), Expect(4) = 8e-050
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 240 EGRPQPADGRHGRRARQERRLQGLAQH 320
Score = 50.6 bits (104), Expect(4) = 8e-050
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 322 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 462
Score = 34.5 bits (69), Expect(4) = 7e-084
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 399 GSRHYRRRQEHHVLRRAA 452
Score = 33.6 bits (67), Expect(5) = 6e-069
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 461 GNIGGTAENMVFLSTAV 411
Score = 27.2 bits (53), Expect(5) = 6e-069
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 387 GESHQGRHEAG 355
Score = 25.8 bits (50), Expect(4) = 7e-084
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 453 NVPCRAAAAVVMEAVS 500
Score = 25.8 bits (50), Expect(5) = 6e-069
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 347 TSVGSFCPK 321
Score = 25.4 bits (49), Expect(2) = 4e-042
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 438 EHGVLVDGG 412
Score = 24.0 bits (46), Expect(4) = 8e-050
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +3
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 492 AVSATGSASTVVPSFGHTIFGERDR 566
Score = 23.1 bits (44), Expect(5) = 6e-069
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 613 LLTWYCTKEFARVH 572
Score = 22.1 bits (42), Expect(4) = 7e-084
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 562 IADHVRARIL 591
>gb|CX611325.1|CX611325 ANR1_24_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_B05_A002 3', mRNA sequence
Length = 705
Score = 284 bits (615), Expect(4) = 3e-082
Identities = 111/133 (83%), Positives = 117/133 (87%)
Frame = -3 / +1
Query: 651 EAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGAST 472
EAVNVPGWYCGPNFMTTNDLREFA+SQINYILGDNPKKMSYVVGFG KYPRH+HHRGAST
Sbjct: 1 EAVNVPGWYCGPNFMTTNDLREFAKSQINYILGDNPKKMSYVVGFGKKYPRHLHHRGAST 180
Query: 471 PHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGX 292
PHNGVKYSCTGGYKWRDSK+ADPNLL GAMVGGPD+NDGFKDSRNT G+ GNAG
Sbjct: 181 PHNGVKYSCTGGYKWRDSKRADPNLLTGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGL 360
Query: 291 XXXXXXLTSSGRG 253
LT+SGRG
Sbjct: 361 VAALVALTNSGRG 399
Score = 226 bits (487), Expect(5) = 4e-068
Identities = 96/106 (90%), Positives = 97/106 (91%)
Frame = +2 / -2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSA L SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 323 PKVLRESLKPSFLSGPPTMAPVSRLGSALLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 144
Query: 509 LLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLT 646
LP PTT*LIFLGLSPRM*LI*D ANSRRSLVVMKFGPQY PGTLT
Sbjct: 143 FLPKPTT*LIFLGLSPRM*LI*DFANSRRSLVVMKFGPQYHPGTLT 6
Score = 162 bits (349), Expect(2) = 6e-040
Identities = 74/93 (79%), Positives = 78/93 (83%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 279 PADHGARQQVGVCPLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 100
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVPAGDVDGL 651
T+NVVDLR EL EVVG HEVW AVP+GDVD L
Sbjct: 99 TKNVVDLRLCELPEVVGCHEVWPAVPSGDVDCL 1
Score = 121 bits (258), Expect(4) = 5e-049
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = -2 / +3
Query: 649 GRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
G QRPR+VLR+KLHD+QRPP VR+VSDQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 3 GSQRPRMVLRAKLHDNQRPPGVRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 179
Score = 57.4 bits (119), Expect(4) = 5e-049
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 237 EGRPQPADGRHGRRARQERRLQGLAQH 317
Score = 50.6 bits (104), Expect(4) = 5e-049
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 319 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 459
Score = 33.6 bits (67), Expect(5) = 4e-068
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 458 GNIGGTAENMVFLSTAV 408
Score = 32.7 bits (65), Expect(4) = 3e-082
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -1 / +3
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHV RRAA
Sbjct: 396 GSRHYRRRQEHHVFRRAA 449
Score = 27.2 bits (53), Expect(5) = 4e-068
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 384 GESHQGRHEAG 352
Score = 25.8 bits (50), Expect(4) = 3e-082
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 450 NVPCRAAAAVVMEAVS 497
Score = 25.8 bits (50), Expect(5) = 4e-068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 344 TSVGSFCPK 318
Score = 24.0 bits (46), Expect(4) = 5e-049
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +3
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 489 AVSATGSASTVVPSFGHTIFGERDR 563
Score = 23.5 bits (45), Expect(2) = 6e-040
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
+HGVLVDGG
Sbjct: 435 KHGVLVDGG 409
Score = 23.1 bits (44), Expect(5) = 4e-068
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 610 LLTWYCTKEFARVH 569
Score = 22.1 bits (42), Expect(4) = 3e-082
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 559 IADHVRARIL 588
>gb|CX613114.1|CX613114 GABR1_6_G11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_G11_A002 3', mRNA sequence
Length = 683
Score = 281 bits (607), Expect(4) = 4e-081
Identities = 110/132 (83%), Positives = 115/132 (87%)
Frame = -3 / +2
Query: 648 AVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
AVNVPGWYCGPNFMTTNDLREFA+ QINYILGDNPKKMSYVVGFG KYPRH+HHRGASTP
Sbjct: 2 AVNVPGWYCGPNFMTTNDLREFAKFQINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTP 181
Query: 468 HNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXX 289
HNGVKYSCTGGYKWRDSKKADPNLL GAMVGGPD+NDGFKDSRNT G+ GNAG
Sbjct: 182 HNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLV 361
Query: 288 XXXXXLTSSGRG 253
LT+SGRG
Sbjct: 362 AALVALTNSGRG 397
Score = 226 bits (488), Expect(5) = 3e-068
Identities = 96/106 (90%), Positives = 98/106 (92%)
Frame = +2 / -3
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 321 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 142
Query: 509 LLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLT 646
LP PTT*LIFLGLSPRM*LI*+ ANSRRSLVVMKFGPQY PGTLT
Sbjct: 141 FLPKPTT*LIFLGLSPRM*LI*NFANSRRSLVVMKFGPQYHPGTLT 4
Score = 162 bits (349), Expect(2) = 6e-040
Identities = 72/91 (79%), Positives = 77/91 (84%)
Frame = +1 / -2
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 277 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 98
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVPAGDVD 645
T+NVVDL+ EL EVVG HEVW AVP+GDVD
Sbjct: 97 TKNVVDLKLCELPEVVGCHEVWPAVPSGDVD 5
Score = 121 bits (258), Expect(4) = 5e-049
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = -2 / +1
Query: 649 GRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
G QRPR+VLR+KLHD+QRPP VR+VSDQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 1 GSQRPRMVLRAKLHDNQRPPGVRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 177
Score = 57.4 bits (119), Expect(4) = 5e-049
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +1
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 235 EGRPQPADGRHGRRARQERRLQGLAQH 315
Score = 50.6 bits (104), Expect(4) = 5e-049
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +2
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 317 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 457
Score = 33.6 bits (67), Expect(5) = 3e-068
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -3
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 456 GNIGGTAENMVFLSTAV 406
Score = 32.7 bits (65), Expect(4) = 4e-081
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHV RRAA
Sbjct: 394 GSRHYRRRQEHHVFRRAA 447
Score = 27.2 bits (53), Expect(5) = 3e-068
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 382 GESHQGRHEAG 350
Score = 25.8 bits (50), Expect(4) = 4e-081
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 448 NVPCRAAAAVVMEAVS 495
Score = 25.8 bits (50), Expect(5) = 3e-068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 342 TSVGSFCPK 316
Score = 24.0 bits (46), Expect(4) = 5e-049
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +1
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 487 AVSATGSASTVVPSFGHTIFGERDR 561
Score = 23.5 bits (45), Expect(2) = 6e-040
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 218 EHGVLVDGG 244
+HGVLVDGG
Sbjct: 433 KHGVLVDGG 407
Score = 23.1 bits (44), Expect(5) = 3e-068
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 608 LLTWYCTKEFARVH 567
Score = 22.1 bits (42), Expect(4) = 4e-081
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 557 IADHVRARIL 586
>gb|BE357367.1|BE357367 DG1_148_A07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 269 bits (582), Expect(4) = 3e-078
Identities = 105/126 (83%), Positives = 110/126 (87%)
Frame = -3 / +1
Query: 630 WYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKY 451
WYCGPNFMTTNDLREFA+SQINYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKY
Sbjct: 1 WYCGPNFMTTNDLREFAKSQINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKY 180
Query: 450 SCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXL 271
SCTGGYKWRDSKKADPNLL GAMVGGPD+NDGFKDSRNT G+ GNAG L
Sbjct: 181 SCTGGYKWRDSKKADPNLLTGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLVAALVAL 360
Query: 270 TSSGRG 253
T+SGRG
Sbjct: 361 TNSGRG 378
Score = 216 bits (466), Expect(5) = 3e-065
Identities = 92/100 (92%), Positives = 93/100 (93%)
Frame = +2 / -1
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 302 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 123
Query: 509 LLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQY 628
LP PTT*LIFLGLSPRM*LI*D ANSRRSLVVMKFGPQY
Sbjct: 122 FLPKPTT*LIFLGLSPRM*LI*DFANSRRSLVVMKFGPQY 3
Score = 153 bits (329), Expect(2) = 9e-038
Identities = 69/86 (80%), Positives = 72/86 (83%)
Frame = +1 / -3
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 258 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 79
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVP 630
T+NVVDLR EL EVVG HEVW AVP
Sbjct: 78 TKNVVDLRLCELPEVVGCHEVWPAVP 1
Score = 107 bits (229), Expect(4) = 4e-045
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -2 / +3
Query: 628 VLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
VLR+KLHD+QRPP VR+VSDQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 3 VLRAKLHDNQRPPGVRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 158
Score = 57.4 bits (119), Expect(4) = 4e-045
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 216 EGRPQPADGRHGRRARQERRLQGLAQH 296
Score = 50.6 bits (104), Expect(4) = 4e-045
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 298 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 438
Score = 34.5 bits (69), Expect(4) = 3e-078
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 375 GSRHYRRRQEHHVLRRAA 428
Score = 33.6 bits (67), Expect(5) = 3e-065
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 437 GNIGGTAENMVFLSTAV 387
Score = 27.2 bits (53), Expect(5) = 3e-065
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 363 GESHQGRHEAG 331
Score = 25.8 bits (50), Expect(4) = 3e-078
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 429 NVPCRAAAAVVMEAVS 476
Score = 25.8 bits (50), Expect(5) = 3e-065
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 323 TSVGSFCPK 297
Score = 25.4 bits (49), Expect(2) = 9e-038
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 414 EHGVLVDGG 388
Score = 24.0 bits (46), Expect(4) = 4e-045
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +3
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 468 AVSATGSASTVVPSFGHTIFGERDR 542
Score = 23.1 bits (44), Expect(5) = 3e-065
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -2
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 589 LLTWYCTKEFARVH 548
Score = 22.1 bits (42), Expect(4) = 3e-078
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 538 IADHVRARIL 567
>gb|CW451021.1|CW451021 fsbb001f189o18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f189o18, DNA
sequence
Length = 604
Score = 202 bits (436), Expect(2) = 2e-077
Identities = 79/107 (73%), Positives = 88/107 (82%)
Frame = -3 / +3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNP+KMSYVVGFG+KYPRHVHHRGASTPH+ VKYSCTGGYKWRDSKKADPN++
Sbjct: 276 QLNYILGDNPRKMSYVVGFGNKYPRHVHHRGASTPHSRVKYSCTGGYKWRDSKKADPNVI 455
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMVGGPD+ND F DSR G+T GNAG +TSSGRG
Sbjct: 456 TGAMVGGPDRNDRFNDSRMAFGQTEPTLVGNAGLVAALVAVTSSGRG 596
Score = 158 bits (340), Expect(3) = 4e-055
Identities = 66/82 (80%), Positives = 69/82 (84%)
Frame = +2 / -1
Query: 323 VLPEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCR 502
V P+ +RESL S SGPPT+AP GSAFLLSRHL PPVHEYLT LCGVDAPRWCTCR
Sbjct: 526 VCPKAMRESLNLSLRSGPPTIAPVITFGSAFLLSRHLYPPVHEYLTRLCGVDAPRWCTCR 347
Query: 503 GYLLPNPTT*LIFLGLSPRM*L 568
GYLLP PTT*LIFLGLSPRM*L
Sbjct: 346 GYLLPKPTT*LIFLGLSPRM*L 281
Score = 108 bits (231), Expect(2) = 2e-077
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -3 / +1
Query: 711 QPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
QPLQYVVANSFLAAL+ADYMEA+NVPGWYCGPNFM T DLR FA+SQ+
Sbjct: 16 QPLQYVVANSFLAALFADYMEAINVPGWYCGPNFMPTQDLRAFAKSQV 159
Score = 96.4 bits (204), Expect(2) = 1e-033
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = +1 / -3
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PA H V VR LAVAPLV AGARVLDA VRR RA VVHVP VL AE +HVAHL VV
Sbjct: 476 PAHHRARDHVRVRLLAVAPLVPAGARVLDAAVRRRRAPVVHVPRVLVAEAHHVAHLPRVV 297
Query: 553 TENVVDL 573
+NVV+L
Sbjct: 296 PKNVVEL 276
Score = 78.0 bits (164), Expect(3) = 4e-055
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = +1 / -2
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAV 723
LR GE TEV+GGHEV VP GDVD LHVVG E E+GVGD VLQRL ++
Sbjct: 156 LRLGERTEVLGGHEVGATVPPGDVDRLHVVGEEGGEEGVGDHVLQRLTVSI 4
Score = 68.9 bits (144), Expect(2) = 1e-033
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +2 / -3
Query: 566 LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSG 709
+ *DLAN+RRS V MK GPQY PGTL RKELATTYCSG
Sbjct: 161 IT*DLANARRSWVGMKLGPQYHPGTLIASM*SAKRAARKELATTYCSG 18
Score = 60.6 bits (126), Expect(5) = 3e-024
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / +3
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVS 572
LL R LRRLHGG QRPR+VL +LH H RPP VRQVS
Sbjct: 42 LLPRRPLRRLHGGDQRPRVVLWPQLHAHPRPPCVRQVS 155
Score = 57.0 bits (118), Expect(5) = 3e-024
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / +2
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAPPWRV 476
QLHS QP+EDELRG +RQQVP ARAPP RV
Sbjct: 281 QLHSWGQPEEDELRGGLRQQVPAARAPPGRV 373
Score = 24.9 bits (48), Expect(5) = 3e-024
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1 / +1
Query: 305 ATPASSRPWWLSPAAA 258
ATPAS R W SPA A
Sbjct: 544 ATPASWRRSWPSPAVA 591
Score = 24.4 bits (47), Expect(5) = 3e-024
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 710 SRCSTSSPTP 681
SRCST SPTP
Sbjct: 17 SRCSTWSPTP 46
Score = 22.6 bits (43), Expect(3) = 4e-055
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -1
Query: 309 TSVGSFCPK 335
TSVGS CPK
Sbjct: 541 TSVGSVCPK 515
Score = 22.1 bits (42), Expect(5) = 3e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 334 FGQNEPTLV 308
FGQ EPTLV
Sbjct: 516 FGQTEPTLV 542
>gb|CN134485.1|CN134485 OX1_26_D08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D08_A002 5', mRNA sequence
Length = 814
Score = 263 bits (568), Expect(3) = 6e-076
Identities = 100/151 (66%), Positives = 119/151 (78%)
Frame = -3 / +3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+ NHGR QPLQY V +FLA+LY+DY+EA + PGWYCGPNF TT LR+FARSQ+
Sbjct: 90 KGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQL 269
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+YILG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L G
Sbjct: 270 DYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVG 449
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
AMV GPD++DG+KD R + + NAG
Sbjct: 450 AMVAGPDRHDGYKDVRTNYNYSEPTLAANAG 542
Score = 87.2 bits (184), Expect(3) = 4e-034
Identities = 43/81 (53%), Positives = 44/81 (54%)
Frame = +2 / -1
Query: 503 GYLLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRK 682
GYL P PTT*LIF G PRM* DLAN RR+ VV K GPQY PG RK
Sbjct: 334 GYLFPKPTT*LIFNGFFPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAASR*SLYKEARK 155
Query: 683 ELATTYCSGCPLPWLKSAIPP 745
T Y SG LPWL PP
Sbjct: 154 AALTAY*SG*GLPWLSCINPP 92
Score = 73.9 bits (155), Expect(3) = 4e-034
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2 / -1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAP 484
+R SL PS LSGP T+AP LG AF +S HL*PP+H YLTPL G+DAP
Sbjct: 499 VRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLHPYLTPL*GIDAP 353
Score = 35.9 bits (72), Expect(3) = 6e-076
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2 / +3
Query: 823 LAGYHNATSLNMCMYFPGFAAFNFTXG 743
L +HN T MC Y P F +FNFT G
Sbjct: 15 LRTFHNQTDNVMCSYLPLFNSFNFTKG 95
Score = 26.7 bits (52), Expect(3) = 6e-076
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 594 IDKNTIFSAIPPMFP 638
Score = 23.5 bits (45), Expect(3) = 4e-034
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW 812
VKL GKY H+ V LW
Sbjct: 88 VKLNELNRGKYEHITLSVWLW 26
>gb|BF481389.1|BF481389 FM1_18_E02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 532
Score = 235 bits (508), Expect(2) = 5e-074
Identities = 89/123 (72%), Positives = 103/123 (83%)
Frame = -3 / +1
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+ NHGR QPLQY V +FLA+LY+DY+EA + PGWYCGPNF TT LR+FARSQ+
Sbjct: 163 KGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQL 342
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+YILG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L G
Sbjct: 343 DYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVG 522
Query: 387 AMV 379
AMV
Sbjct: 523 AMV 531
Score = 90.0 bits (190), Expect(3) = 2e-032
Identities = 44/81 (54%), Positives = 45/81 (55%)
Frame = +2 / -3
Query: 503 GYLLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRK 682
GYL P PTT*LIF G PRM* DLAN RR+ VV KFGPQY PG RK
Sbjct: 407 GYLFPKPTT*LIFNGFFPRM*SSCDLANLRRTSVV*KFGPQYHPGVSAASR*SLYKEARK 228
Query: 683 ELATTYCSGCPLPWLKSAIPP 745
T Y SG LPWL PP
Sbjct: 227 AALTAY*SG*GLPWLSCINPP 165
Score = 64.8 bits (135), Expect(2) = 5e-074
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = -2 / +1
Query: 895 LPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXG 743
LPGAQ R+FL+PGYPY L +HN T MC Y P F +FNFT G
Sbjct: 16 LPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKG 168
Score = 56.5 bits (117), Expect(3) = 2e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / -3
Query: 380 TMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAP 484
T+AP LG AF +S HL*PP+H YLTPL G+DAP
Sbjct: 530 TIAPTRILGFAFFVSLHL*PPLHPYLTPL*GIDAP 426
Score = 32.7 bits (65), Expect(3) = 2e-032
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +3 / -3
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL GKY H+ V LW S S G PGLR
Sbjct: 161 VKLNELNRGKYEHITLSVWLWNVLSISS*GYPGLR 57
>gb|CF071078.1|CF071078 FE1_15_D12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_D12_A002 3', mRNA sequence
Length = 707
Score = 196 bits (422), Expect(5) = 1e-073
Identities = 77/98 (78%), Positives = 82/98 (83%)
Frame = -3 / +3
Query: 546 PKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPD 367
P+KMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL GAMVGGPD
Sbjct: 108 PRKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPD 287
Query: 366 KNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 288 RNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 401
Score = 160 bits (345), Expect(6) = 7e-067
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = +2 / -2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 325 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 146
Query: 509 LLPNPTT*LIFLGL 550
LP PTT*LIFLG+
Sbjct: 145 FLPKPTT*LIFLGV 104
Score = 101 bits (216), Expect(3) = 2e-036
Identities = 45/56 (80%), Positives = 47/56 (83%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHL 540
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHL
Sbjct: 281 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHL 114
Score = 100 bits (213), Expect(4) = 6e-043
Identities = 40/50 (80%), Positives = 41/50 (82%)
Frame = -3 / +2
Query: 651 EAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYP 502
EAVNVPGWYCGPNFMTTNDLREFA+SQINYILGDNPKK F K P
Sbjct: 2 EAVNVPGWYCGPNFMTTNDLREFAKSQINYILGDNPKKDELRGWFRQKVP 151
Score = 78.5 bits (165), Expect(6) = 7e-067
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +2 / -3
Query: 539 FLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLT 646
FLGLSPRM*LI*D ANSRRSLVVMKFGPQY PGTLT
Sbjct: 114 FLGLSPRM*LI*DFANSRRSLVVMKFGPQYHPGTLT 7
Score = 75.3 bits (158), Expect(5) = 1e-073
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -2 / +1
Query: 652 GGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQE 539
GG QRPR+VLR+KLHD+QRPP VR+VSDQLHS *QPQE
Sbjct: 1 GGSQRPRMVLRAKLHDNQRPPGVRKVSDQLHSW*QPQE 114
Score = 65.7 bits (137), Expect(3) = 2e-036
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1 / -2
Query: 541 LGVVTENVVDLRPGELTEVVGGHEVWTAVPAGDVDGL 651
LGVVT+NVVDLR EL EVVG HEVW AVP+GDVD L
Sbjct: 112 LGVVTKNVVDLRLCELPEVVGCHEVWPAVPSGDVDCL 2
Score = 57.4 bits (119), Expect(4) = 6e-043
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +2
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 239 EGRPQPADGRHGRRARQERRLQGLAQH 319
Score = 50.6 bits (104), Expect(4) = 6e-043
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +3
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 321 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 461
Score = 34.5 bits (69), Expect(5) = 1e-073
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 398 GSRHYRRRQEHHVLRRAA 451
Score = 33.6 bits (67), Expect(6) = 7e-067
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 460 GNIGGTAENMVFLSTAV 410
Score = 27.2 bits (53), Expect(6) = 7e-067
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 386 GESHQGRHEAG 354
Score = 25.8 bits (50), Expect(5) = 1e-073
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 452 NVPCRAAAAVVMEAVS 499
Score = 25.8 bits (50), Expect(6) = 7e-067
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 346 TSVGSFCPK 320
Score = 25.4 bits (49), Expect(3) = 2e-036
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 437 EHGVLVDGG 411
Score = 24.0 bits (46), Expect(4) = 6e-043
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +2
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 491 AVSATGSASTVVPSFGHTIFGERDR 565
Score = 23.1 bits (44), Expect(6) = 7e-067
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 612 LLTWYCTKEFARVH 571
Score = 22.1 bits (42), Expect(5) = 1e-073
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 561 IADHVRARIL 590
>gb|CW164355.1|CW164355 104_572_11151945_116_36461_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151945, DNA
sequence
Length = 766
Score = 148 bits (317), Expect(2) = 1e-068
Identities = 56/61 (91%), Positives = 61/61 (100%)
Frame = -3 / +1
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGMALFNHG+GQPLQYVVANSF+AALYADYMEAVNVPGWYCGPNFMTTNDLREFA+SQ+
Sbjct: 445 KGGMALFNHGKGQPLQYVVANSFIAALYADYMEAVNVPGWYCGPNFMTTNDLREFAKSQV 624
Query: 567 N 565
+
Sbjct: 625 S 627
Score = 133 bits (286), Expect(2) = 1e-068
Identities = 55/77 (71%), Positives = 56/77 (72%)
Frame = -2 / +1
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK NILDF VFSW LPGAQ RMFLNPGYPY SL GYHNATSL
Sbjct: 220 TDPRLPKNAKAFFNILDFSVFSWDNKLPGAQLLLSRLRMFLNPGYPYEESLIGYHNATSL 399
Query: 793 NMCMYFPGFAAFNFTXG 743
NMCMYFP F +FNFT G
Sbjct: 400 NMCMYFPRFGSFNFTKG 450
Score = 110 bits (235), Expect(2) = 1e-047
Identities = 46/60 (76%), Positives = 46/60 (76%)
Frame = +2 / -3
Query: 566 LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
L *D ANSRRSLVVMKFGPQY PGTLT KELATTYCSGCPLPWLKSAIPP
Sbjct: 626 LT*DFANSRRSLVVMKFGPQYHPGTLTASM*SA*SAAMKELATTYCSGCPLPWLKSAIPP 447
Score = 109 bits (233), Expect(3) = 7e-043
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +1 / -2
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
LR EL EVVG HEVW AVP+GDVD LHVVGVER ++GVGDDVLQRLP AVVEERHP+L
Sbjct: 621 LRLCELPEVVGCHEVWPAVPSGDVDCLHVVGVERGDEGVGDDVLQRLPLAVVEERHPSL 445
Score = 101 bits (215), Expect(2) = 1e-047
Identities = 48/75 (64%), Positives = 48/75 (64%)
Frame = +3 / -3
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLK K GKYMHMLRLVALW*P S SYG*PGLRNM QLNT KSR
Sbjct: 443 VKLKEPKRGKYMHMLRLVALW*PMSDSSYG*PGLRNMRSRDSSSCAPGSLLSQLNTEKSR 264
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 263 MLKKALAFLGSRGSV 219
Score = 82.2 bits (173), Expect(2) = 1e-023
Identities = 38/70 (54%), Positives = 43/70 (61%)
Frame = -2 / +3
Query: 775 PGFAAFNFTXGRDGALXXXXXXXXXXXXXQLLSRCALRRLHGGRQRPRLVLRSKLHDHQR 596
P GRDGAL QLL R ALRRLHGG QRPR+VLR+KLHD+QR
Sbjct: 417 PALRLLQLHQGRDGALQPRQGAAAAVRRRQLLHRRALRRLHGGSQRPRMVLRAKLHDNQR 596
Query: 595 PP*VRQVSDQ 566
PP VR+VS +
Sbjct: 597 PPGVRKVSGE 626
Score = 66.6 bits (139), Expect(3) = 7e-043
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = +2 / -2
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
QPRQQQL AREL PAEH EVEDV LGVLGQP VG
Sbjct: 330 QPRQQQLRARELVVPAEHREVEDVEEGLGVLGQPRVG 220
Score = 49.6 bits (102), Expect(2) = 1e-023
Identities = 21/40 (52%), Positives = 21/40 (52%)
Frame = -3 / +2
Query: 984 SXXXPTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
S PT GCP TPR SAG SSRA SCC RG
Sbjct: 209 SASPPTRGCPRTPRPSSTSSTSRCSAGTTSSRARSCCCRG 328
Score = 38.2 bits (77), Expect(3) = 7e-043
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1 / -1
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*R RS STCTC*GWW
Sbjct: 442 *S*RSRSAGSTCTC*GWW 389
>gb|CW230233.1|CW230233 104_671_11207740_116_37270_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207740, DNA
sequence
Length = 712
Score = 148 bits (317), Expect(2) = 1e-068
Identities = 56/61 (91%), Positives = 61/61 (100%)
Frame = -3 / -3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGMALFNHG+GQPLQYVVANSF+AALYADYMEAVNVPGWYCGPNFMTTNDLREFA+SQ+
Sbjct: 281 KGGMALFNHGKGQPLQYVVANSFIAALYADYMEAVNVPGWYCGPNFMTTNDLREFAKSQV 102
Query: 567 N 565
+
Sbjct: 101 S 99
Score = 133 bits (286), Expect(2) = 1e-068
Identities = 55/77 (71%), Positives = 56/77 (72%)
Frame = -2 / -3
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK NILDF VFSW LPGAQ RMFLNPGYPY SL GYHNATSL
Sbjct: 506 TDPRLPKNAKAFFNILDFSVFSWDNKLPGAQLLLSRLRMFLNPGYPYEESLIGYHNATSL 327
Query: 793 NMCMYFPGFAAFNFTXG 743
NMCMYFP F +FNFT G
Sbjct: 326 NMCMYFPRFGSFNFTKG 276
Score = 110 bits (235), Expect(2) = 1e-047
Identities = 46/60 (76%), Positives = 46/60 (76%)
Frame = +2 / +1
Query: 566 LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
L *D ANSRRSLVVMKFGPQY PGTLT KELATTYCSGCPLPWLKSAIPP
Sbjct: 100 LT*DFANSRRSLVVMKFGPQYHPGTLTASM*SA*SAAMKELATTYCSGCPLPWLKSAIPP 279
Score = 109 bits (233), Expect(3) = 7e-043
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +1 / +3
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
LR EL EVVG HEVW AVP+GDVD LHVVGVER ++GVGDDVLQRLP AVVEERHP+L
Sbjct: 105 LRLCELPEVVGCHEVWPAVPSGDVDCLHVVGVERGDEGVGDDVLQRLPLAVVEERHPSL 281
Score = 101 bits (215), Expect(2) = 1e-047
Identities = 48/75 (64%), Positives = 48/75 (64%)
Frame = +3 / +1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLK K GKYMHMLRLVALW*P S SYG*PGLRNM QLNT KSR
Sbjct: 283 VKLKEPKRGKYMHMLRLVALW*PMSDSSYG*PGLRNMRSRDSSSCAPGSLLSQLNTEKSR 462
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 463 MLKKALAFLGSRGSV 507
Score = 82.2 bits (173), Expect(2) = 1e-023
Identities = 38/70 (54%), Positives = 43/70 (61%)
Frame = -2 / -2
Query: 775 PGFAAFNFTXGRDGALXXXXXXXXXXXXXQLLSRCALRRLHGGRQRPRLVLRSKLHDHQR 596
P GRDGAL QLL R ALRRLHGG QRPR+VLR+KLHD+QR
Sbjct: 309 PALRLLQLHQGRDGALQPRQGAAAAVRRRQLLHRRALRRLHGGSQRPRMVLRAKLHDNQR 130
Query: 595 PP*VRQVSDQ 566
PP VR+VS +
Sbjct: 129 PPGVRKVSGE 100
Score = 66.6 bits (139), Expect(3) = 7e-043
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = +2 / +3
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
QPRQQQL AREL PAEH EVEDV LGVLGQP VG
Sbjct: 396 QPRQQQLRARELVVPAEHREVEDVEEGLGVLGQPRVG 506
Score = 49.6 bits (102), Expect(2) = 1e-023
Identities = 21/40 (52%), Positives = 21/40 (52%)
Frame = -3 / -1
Query: 984 SXXXPTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
S PT GCP TPR SAG SSRA SCC RG
Sbjct: 517 SASPPTRGCPRTPRPSSTSSTSRCSAGTTSSRARSCCCRG 398
Score = 38.2 bits (77), Expect(3) = 7e-043
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*R RS STCTC*GWW
Sbjct: 284 *S*RSRSAGSTCTC*GWW 337
>gb|CD220430.1|CD220430 CCC1_67_H06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_H06_A007 3', mRNA sequence
Length = 635
Score = 226 bits (488), Expect(4) = 4e-066
Identities = 90/112 (80%), Positives = 95/112 (84%)
Frame = -3 / +3
Query: 588 EFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKA 409
EFA+SQINYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKA
Sbjct: 3 EFAKSQINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKA 182
Query: 408 DPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
DPNLL GAMVGGPD+NDGFKDSR T G+ GNAG LT+SGRG
Sbjct: 183 DPNLLTGAMVGGPDRNDGFKDSRKTFGQNEPTLVGNAGLVAALVALTNSGRG 338
Score = 185 bits (399), Expect(5) = 3e-056
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2 / -2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 262 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 83
Query: 509 LLPNPTT*LIFLGLSPRM*LI*DLANS 589
LP PTT*LIFLGLSPRM*LI*D ANS
Sbjct: 82 FLPKPTT*LIFLGLSPRM*LI*DFANS 2
Score = 127 bits (272), Expect(3) = 6e-030
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 218 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 39
Query: 553 TENVVDLRPGEL 588
T+NVVDLR EL
Sbjct: 38 TKNVVDLRLCEL 3
Score = 81.3 bits (171), Expect(4) = 2e-036
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = -2 / +2
Query: 586 VRQVSDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
VR+VSDQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 5 VRKVSDQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 118
Score = 54.2 bits (112), Expect(4) = 2e-036
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2 / +2
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQ+
Sbjct: 176 EGRPQPADGRHGRRARQERRLQGLAQN 256
Score = 50.6 bits (104), Expect(4) = 2e-036
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +3
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 258 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 398
Score = 34.5 bits (69), Expect(4) = 4e-066
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 335 GSRHYRRRQEHHVLRRAA 388
Score = 33.6 bits (67), Expect(5) = 3e-056
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 397 GNIGGTAENMVFLSTAV 347
Score = 27.2 bits (53), Expect(5) = 3e-056
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 323 GESHQGRHEAG 291
Score = 25.8 bits (50), Expect(4) = 4e-066
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 389 NVPCRAAAAVVMEAVS 436
Score = 25.8 bits (50), Expect(5) = 3e-056
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 283 TSVGSFCPK 257
Score = 25.4 bits (49), Expect(3) = 6e-030
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 374 EHGVLVDGG 348
Score = 24.0 bits (46), Expect(4) = 4e-066
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 123 VIDHVRARIL 94
++DHVRARIL
Sbjct: 498 IVDHVRARIL 527
Score = 24.0 bits (46), Expect(4) = 2e-036
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +2
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 428 AVSATGSASTVVPSFGHTIFGERDR 502
Score = 23.1 bits (44), Expect(5) = 3e-056
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 549 LLTWYCTKEFARVH 508
Score = 21.7 bits (41), Expect(3) = 6e-030
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 83 IVQKRIRART*S 118
++ KRIRART*S
Sbjct: 538 VLYKRIRART*S 503
>gb|AW746192.1|AW746192 WS1_40_A04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 239 bits (517), Expect(2) = 7e-064
Identities = 91/137 (66%), Positives = 109/137 (79%)
Frame = -3 / +1
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYV 526
LQY V +FLA+LY+DY+EA + PGWYCGPNF TT LR+FARSQ++YILG NP KMSYV
Sbjct: 1 LQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYV 180
Query: 525 VGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKD 346
VGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD
Sbjct: 181 VGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKD 360
Query: 345 SRNTSGRTSRRWSGNAG 295
R + + NAG
Sbjct: 361 VRTNYNYSEPTLAANAG 411
Score = 73.9 bits (155), Expect(2) = 1e-027
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2 / -1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAP 484
+R SL PS LSGP T+AP LG AF +S HL*PP+H YLTPL G+DAP
Sbjct: 368 VRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLHPYLTPL*GIDAP 222
Score = 71.2 bits (149), Expect(2) = 1e-027
Identities = 35/66 (53%), Positives = 36/66 (54%)
Frame = +2 / -1
Query: 503 GYLLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRK 682
GYL P PTT*LIF G PRM* DLAN RR+ VV K GPQY PG RK
Sbjct: 203 GYLFPKPTT*LIFNGFFPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAASR*SLYKEARK 24
Query: 683 ELATTY 700
T Y
Sbjct: 23 AALTAY 6
Score = 26.7 bits (52), Expect(2) = 7e-064
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 463 IDKNTIFSAIPPMFP 507
>gb|CW164356.1|CW164356 104_572_11151945_148_36462_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151945, DNA
sequence
Length = 735
Score = 219 bits (473), Expect(4) = 2e-063
Identities = 87/107 (81%), Positives = 91/107 (85%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QINYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL
Sbjct: 606 QINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 427
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMVGGPD+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 426 TGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 286
Score = 176 bits (378), Expect(5) = 2e-053
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +2 / +2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 362 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 541
Query: 509 LLPNPTT*LIFLGLSPRM*LI 571
LP PTT*LIFLGLSPRM*LI
Sbjct: 542 FLPKPTT*LIFLGLSPRM*LI 604
Score = 123 bits (264), Expect(2) = 7e-029
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = +1 / +1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 406 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 585
Query: 553 TENVVDL 573
T+NVVDL
Sbjct: 586 TKNVVDL 606
Score = 73.5 bits (154), Expect(4) = 5e-035
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -2 / -3
Query: 574 SDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
+DQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 607 ADQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 506
Score = 57.4 bits (119), Expect(4) = 5e-035
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / -3
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 448 EGRPQPADGRHGRRARQERRLQGLAQH 368
Score = 50.6 bits (104), Expect(4) = 5e-035
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / -1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 366 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 226
Score = 34.5 bits (69), Expect(4) = 2e-063
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 289 GSRHYRRRQEHHVLRRAA 236
Score = 33.6 bits (67), Expect(5) = 2e-053
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 227 GNIGGTAENMVFLSTAV 277
Score = 27.2 bits (53), Expect(5) = 2e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 301 GESHQGRHEAG 333
Score = 25.8 bits (50), Expect(4) = 2e-063
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 235 NVPCRAAAAVVMEAVS 188
Score = 25.8 bits (50), Expect(5) = 2e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 341 TSVGSFCPK 367
Score = 25.4 bits (49), Expect(2) = 7e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 250 EHGVLVDGG 276
Score = 24.0 bits (46), Expect(4) = 5e-035
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / -3
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 196 AVSATGSASTVVPSFGHTIFGERDR 122
Score = 23.1 bits (44), Expect(5) = 2e-053
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 75 LLTWYCTKEFARVH 116
Score = 22.1 bits (42), Expect(4) = 2e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 126 IADHVRARIL 97
>gb|CW022238.1|CW022238 104_161_10431724_1_30006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431724, DNA
sequence
Length = 702
Score = 219 bits (473), Expect(4) = 2e-063
Identities = 87/107 (81%), Positives = 91/107 (85%)
Frame = -3 / +2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QINYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL
Sbjct: 29 QINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 208
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMVGGPD+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 209 TGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 349
Score = 176 bits (378), Expect(5) = 2e-053
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +2 / -1
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 273 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 94
Query: 509 LLPNPTT*LIFLGLSPRM*LI 571
LP PTT*LIFLGLSPRM*LI
Sbjct: 93 FLPKPTT*LIFLGLSPRM*LI 31
Score = 123 bits (264), Expect(2) = 7e-029
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = +1 / -3
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 229 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 50
Query: 553 TENVVDL 573
T+NVVDL
Sbjct: 49 TKNVVDL 29
Score = 73.5 bits (154), Expect(4) = 5e-035
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -2 / +1
Query: 574 SDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
+DQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 28 ADQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 129
Score = 57.4 bits (119), Expect(4) = 5e-035
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +1
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 187 EGRPQPADGRHGRRARQERRLQGLAQH 267
Score = 50.6 bits (104), Expect(4) = 5e-035
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +2
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 269 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 409
Score = 34.5 bits (69), Expect(4) = 2e-063
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 346 GSRHYRRRQEHHVLRRAA 399
Score = 33.6 bits (67), Expect(5) = 2e-053
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 408 GNIGGTAENMVFLSTAV 358
Score = 27.2 bits (53), Expect(5) = 2e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 334 GESHQGRHEAG 302
Score = 25.8 bits (50), Expect(5) = 2e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 294 TSVGSFCPK 268
Score = 25.8 bits (50), Expect(4) = 2e-063
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 400 NVPCRAAAAVVMEAVS 447
Score = 25.4 bits (49), Expect(2) = 7e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 385 EHGVLVDGG 359
Score = 24.0 bits (46), Expect(4) = 5e-035
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +1
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 439 AVSATGSASTVVPSFGHTIFGERDR 513
Score = 23.1 bits (44), Expect(5) = 2e-053
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -2
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 560 LLTWYCTKEFARVH 519
Score = 22.1 bits (42), Expect(4) = 2e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 509 IADHVRARIL 538
>gb|CW236952.1|CW236952 104_693_11215895_148_37519_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215895, DNA
sequence
Length = 667
Score = 219 bits (473), Expect(4) = 2e-063
Identities = 87/107 (81%), Positives = 91/107 (85%)
Frame = -3 / +2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QINYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL
Sbjct: 26 QINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 205
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMVGGPD+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 206 TGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 346
Score = 176 bits (378), Expect(5) = 2e-053
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +2 / -2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 270 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 91
Query: 509 LLPNPTT*LIFLGLSPRM*LI 571
LP PTT*LIFLGLSPRM*LI
Sbjct: 90 FLPKPTT*LIFLGLSPRM*LI 28
Score = 123 bits (264), Expect(2) = 7e-029
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 226 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 47
Query: 553 TENVVDL 573
T+NVVDL
Sbjct: 46 TKNVVDL 26
Score = 73.5 bits (154), Expect(4) = 5e-035
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -2 / +1
Query: 574 SDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
+DQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 25 ADQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 126
Score = 57.4 bits (119), Expect(4) = 5e-035
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +1
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 184 EGRPQPADGRHGRRARQERRLQGLAQH 264
Score = 50.6 bits (104), Expect(4) = 5e-035
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +2
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 266 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 406
Score = 34.5 bits (69), Expect(4) = 2e-063
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 343 GSRHYRRRQEHHVLRRAA 396
Score = 33.6 bits (67), Expect(5) = 2e-053
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 405 GNIGGTAENMVFLSTAV 355
Score = 27.2 bits (53), Expect(5) = 2e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 331 GESHQGRHEAG 299
Score = 25.8 bits (50), Expect(4) = 2e-063
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 397 NVPCRAAAAVVMEAVS 444
Score = 25.8 bits (50), Expect(5) = 2e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 291 TSVGSFCPK 265
Score = 25.4 bits (49), Expect(2) = 7e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 382 EHGVLVDGG 356
Score = 24.0 bits (46), Expect(4) = 5e-035
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +1
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 436 AVSATGSASTVVPSFGHTIFGERDR 510
Score = 23.1 bits (44), Expect(5) = 2e-053
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 557 LLTWYCTKEFARVH 516
Score = 22.1 bits (42), Expect(4) = 2e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 506 IADHVRARIL 535
>gb|CW388822.1|CW388822 fsbb001f073l23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073l23, DNA
sequence
Length = 581
Score = 219 bits (473), Expect(4) = 2e-063
Identities = 87/107 (81%), Positives = 91/107 (85%)
Frame = -3 / +1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QINYILGDNPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL
Sbjct: 61 QINYILGDNPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 240
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMVGGPD+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 241 TGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 381
Score = 176 bits (378), Expect(5) = 6e-052
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +2 / -1
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 305 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 126
Query: 509 LLPNPTT*LIFLGLSPRM*LI 571
LP PTT*LIFLGLSPRM*LI
Sbjct: 125 FLPKPTT*LIFLGLSPRM*LI 63
Score = 123 bits (264), Expect(2) = 7e-029
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = +1 / -3
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLGVV
Sbjct: 261 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLGVV 82
Query: 553 TENVVDL 573
T+NVVDL
Sbjct: 81 TKNVVDL 61
Score = 73.5 bits (154), Expect(4) = 5e-035
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -2 / +3
Query: 574 SDQLHSR*QPQEDELRGWVRQQVPTARAPPWRVH 473
+DQLHS *QPQEDELRGW RQ+VP A APPWRVH
Sbjct: 60 ADQLHSW*QPQEDELRGWFRQKVPAAPAPPWRVH 161
Score = 57.4 bits (119), Expect(4) = 5e-035
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 219 EGRPQPADGRHGRRARQERRLQGLAQH 299
Score = 50.6 bits (104), Expect(4) = 5e-035
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 301 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 441
Score = 34.5 bits (69), Expect(4) = 2e-063
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 378 GSRHYRRRQEHHVLRRAA 431
Score = 33.6 bits (67), Expect(5) = 6e-052
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 440 GNIGGTAENMVFLSTAV 390
Score = 27.2 bits (53), Expect(5) = 6e-052
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 366 GESHQGRHEAG 334
Score = 25.8 bits (50), Expect(4) = 2e-063
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 432 NVPCRAAAAVVMEAVS 479
Score = 25.8 bits (50), Expect(5) = 6e-052
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 326 TSVGSFCPK 300
Score = 25.4 bits (49), Expect(2) = 7e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 417 EHGVLVDGG 391
Score = 24.0 bits (46), Expect(4) = 5e-035
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +3
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 471 AVSATGSASTVVPSFGHTIFGERDR 545
Score = 22.1 bits (42), Expect(4) = 2e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 541 IADHVRARIL 570
Score = 21.7 bits (41), Expect(5) = 6e-052
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 83 IVQKRIRART*S 118
++ KRIRART*S
Sbjct: 581 VLYKRIRART*S 546
>gb|CL175875.1|CL175875 104_381_10892754_116_31765_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892754, DNA
sequence
Length = 733
Score = 162 bits (348), Expect(3) = 3e-063
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = -3 / +3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++YILG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L
Sbjct: 234 QLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 413
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
GAMV GPD++DG+KD R + + NAG
Sbjct: 414 VGAMVAGPDRHDGYKDVRTNYNYSEPTLAANAG 512
Score = 94.1 bits (199), Expect(3) = 3e-063
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = -3 / +3
Query: 717 RGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINY 562
R QPLQY V +FLA+LY+DY+EA + PGWYCGPNF TT LR+FARSQ+ Y
Sbjct: 3 RPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQVKY 158
Score = 73.9 bits (155), Expect(3) = 4e-025
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2 / -1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAP 484
+R SL PS LSGP T+AP LG AF +S HL*PP+H YLTPL G+DAP
Sbjct: 469 VRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLHPYLTPL*GIDAP 323
Score = 43.2 bits (88), Expect(3) = 4e-025
Identities = 21/45 (46%), Positives = 22/45 (48%)
Frame = +2 / -1
Query: 575 DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSG 709
DLAN RR+ VV K GPQY PG RK T Y SG
Sbjct: 145 DLANLRRTSVV*KLGPQYHPGVSAASR*SLYKEARKAALTAY*SG 11
Score = 37.3 bits (75), Expect(3) = 4e-025
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 503 GYLLPNPTT*LIFLGLSPRM* 565
GYL P PTT*LIF G PRM*
Sbjct: 304 GYLFPKPTT*LIFNGFFPRM* 242
Score = 26.7 bits (52), Expect(3) = 3e-063
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 564 IDKNTIFSAIPPMFP 608
>gb|CW163891.1|CW163891 104_571_11151698_116_36456_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151698, DNA
sequence
Length = 692
Score = 160 bits (344), Expect(3) = 3e-062
Identities = 63/107 (58%), Positives = 74/107 (69%)
Frame = -3 / -3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVGFG+ YP+HVHHRGAS P NGV Y C GG+KWRD+KK +PN++
Sbjct: 399 QIEYILGKNPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNII 220
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++D FKD+R T GNAG L+ G G
Sbjct: 219 VGAMVAGPDRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 79
Score = 93.2 bits (197), Expect(3) = 9e-027
Identities = 42/75 (56%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SL S+ SGP TMAP LG FL+S H PP+ TP G++APRW TC G P
Sbjct: 164 LRASLNLSWRSGPATMAPTMILGFGFLVSLHFHPPLQP**TPFLGIEAPRW*TCLG*WFP 343
Query: 518 NPTT*LIFLGLSPRM 562
NPTT*LIF G P+M
Sbjct: 344 NPTT*LIFKGFFPKM 388
Score = 91.8 bits (194), Expect(3) = 3e-062
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = -3 / -1
Query: 756 TSPKGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFAR 577
+S GG NHG+ QPLQYVV +FLA++++DY+EA + PGWYCGP+F + LR FAR
Sbjct: 656 SSTTGG*FQLNHGKPQPLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEVLRSFAR 477
Query: 576 SQI 568
+Q+
Sbjct: 476 TQV 468
Score = 40.5 bits (82), Expect(3) = 9e-027
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +2 / +1
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPPXGE 754
LA RR+ + K+GPQY PG R TTY GC P PP E
Sbjct: 478 LAKLRRTSIE*KWGPQYHPGVSAASR*SLNTEARNAALTTY*RGCGFP*FN*NQPPVVE 654
Score = 27.2 bits (53), Expect(3) = 3e-062
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 238 VDKNTMFSAVPHNVP 194
VDKN MFSAVP P
Sbjct: 78 VDKNAMFSAVPPMFP 34
Score = 26.3 bits (51), Expect(3) = 9e-027
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+ FLST
Sbjct: 35 GNMGGTAENIAFLST 79
>gb|CD220687.1|CD220687 CCC1_68_E02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_68_E02_A007 5', mRNA sequence
Length = 606
Score = 172 bits (370), Expect(2) = 4e-059
Identities = 64/99 (64%), Positives = 79/99 (79%)
Frame = -3 / +3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
+GG+ NHG+ QPLQYVV +FLA++++DY+EA + PGWYCGP+F + LR FAR+QI
Sbjct: 309 RGGLIQLNHGKPQPLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEALRSFARTQI 488
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKY 451
YILG NP KMSYVVGFG+ YP+HVHHRGAS P NGV Y
Sbjct: 489 EYILGKNPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHY 605
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 44/96 (45%), Positives = 50/96 (52%)
Frame = +2 / -3
Query: 458 TPLCGVDAPRWCTCRGYLLPNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPG 637
TP G++APRW TC G PNPTT*LIF G P+M I* LA RR+ + K+GPQY PG
Sbjct: 598 TPFLGIEAPRW*TCLG*WFPNPTT*LIFKGFFPKMYSI*VLAKLRRASIE*KWGPQYHPG 419
Query: 638 TLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
R TTY GC P PP
Sbjct: 418 VSAASR*SLNTEARNAALTTY*RGCGFP*FN*IKPP 311
Score = 78.0 bits (164), Expect(2) = 4e-059
Identities = 35/77 (45%), Positives = 42/77 (54%)
Frame = -2 / +3
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
T +L K A D+ VFSW L GAQ R+FL+PGYPY L +HN TS+
Sbjct: 84 THPKLAKHAGAFWGGPDYGVFSWDNKLTGAQVLLSRLRLFLSPGYPYEEMLRAFHNQTSI 263
Query: 793 NMCMYFPGFAAFNFTXG 743
MC Y P F +FN T G
Sbjct: 264 IMCSYLPIFKSFNRTRG 314
Score = 38.6 bits (78), Expect(2) = 1e-023
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = +3 / -3
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNT 917
V LK K G+ HM+ LV LW + SYG PGL+ QLNT
Sbjct: 307 VLLKDLKIGR*EHMIMLVWLWNALNISSYGYPGLKKSLNRLRRTCAPVSLLSQLNT 140
>gb|CW407797.1|CW407797 fsbb001f101g18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101g18, DNA
sequence
Length = 731
Score = 160 bits (344), Expect(3) = 2e-058
Identities = 63/107 (58%), Positives = 74/107 (69%)
Frame = -3 / +3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVGFG+ YP+HVHHRGAS P NGV Y C GG+KWRD+KK +PN++
Sbjct: 216 QIEYILGKNPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNII 395
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++D FKD+R T GNAG L+ G G
Sbjct: 396 VGAMVAGPDRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 536
Score = 93.2 bits (197), Expect(3) = 1e-024
Identities = 42/75 (56%), Positives = 48/75 (64%)
Frame = +2 / -2
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SL S+ SGP TMAP LG FL+S H PP+ TP G++APRW TC G P
Sbjct: 451 LRASLNLSWRSGPATMAPTMILGFGFLVSLHFHPPLQP**TPFLGIEAPRW*TCLG*WFP 272
Query: 518 NPTT*LIFLGLSPRM 562
NPTT*LIF G P+M
Sbjct: 271 NPTT*LIFKGFFPKM 227
Score = 79.4 bits (167), Expect(3) = 2e-058
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = -3 / +1
Query: 711 QPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
QPLQYVV +FLA++++DY+EA + PGWYCGP+F + LR FAR+Q+
Sbjct: 4 QPLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEVLRSFARTQV 147
Score = 33.1 bits (66), Expect(3) = 1e-024
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2 / -1
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSG 709
LA RR+ + K+GPQY PG R TTY G
Sbjct: 137 LAKLRRTSIE*KWGPQYHPGVSAASR*SLNTEARNAALTTY*RG 6
Score = 27.2 bits (53), Expect(3) = 2e-058
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
VDKN MFSAVP P
Sbjct: 537 VDKNAMFSAVPPMFP 581
Score = 26.3 bits (51), Expect(3) = 1e-024
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+ FLST
Sbjct: 580 GNMGGTAENIAFLST 536
>gb|CX616301.1|CX616301 GABR1_27_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_D03_A002 3', mRNA sequence
Length = 605
Score = 200 bits (431), Expect(4) = 8e-058
Identities = 79/99 (79%), Positives = 83/99 (83%)
Frame = -3 / +3
Query: 549 NPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGP 370
NPKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL GAMVGGP
Sbjct: 3 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 182
Query: 369 DKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
D+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 183 DRNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 299
Score = 162 bits (348), Expect(5) = 2e-049
Identities = 67/74 (90%), Positives = 68/74 (91%)
Frame = +2 / -2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 223 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 44
Query: 509 LLPNPTT*LIFLGL 550
LP PTT*LIFLGL
Sbjct: 43 FLPKPTT*LIFLGL 2
Score = 105 bits (225), Expect(3) = 1e-023
Identities = 47/59 (79%), Positives = 49/59 (83%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGV 549
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGR TVV VP VL AE NHVAHLLGV
Sbjct: 179 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRPTVVQVPRVLFAETNHVAHLLGV 3
Score = 58.3 bits (121), Expect(4) = 1e-030
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -2 / +2
Query: 550 QPQEDELRGWVRQQVPTARAPPWRVH 473
QPQEDELRGW RQ+VP A APPW VH
Sbjct: 2 QPQEDELRGWFRQKVPAAPAPPWGVH 79
Score = 57.4 bits (119), Expect(4) = 1e-030
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +2
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 137 EGRPQPADGRHGRRARQERRLQGLAQH 217
Score = 50.6 bits (104), Expect(4) = 1e-030
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +3
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 219 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 359
Score = 34.5 bits (69), Expect(4) = 8e-058
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 296 GSRHYRRRQEHHVLRRAA 349
Score = 33.6 bits (67), Expect(5) = 2e-049
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 358 GNIGGTAENMVFLSTAV 308
Score = 27.2 bits (53), Expect(5) = 2e-049
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 284 GESHQGRHEAG 252
Score = 25.8 bits (50), Expect(5) = 2e-049
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 244 TSVGSFCPK 218
Score = 25.8 bits (50), Expect(4) = 8e-058
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 350 NVPCRAAAAVVMEAVS 397
Score = 25.4 bits (49), Expect(3) = 1e-023
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 335 EHGVLVDGG 309
Score = 24.0 bits (46), Expect(4) = 1e-030
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +2
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 389 AVSATGSASTVVPSFGHTIFGERDR 463
Score = 23.1 bits (44), Expect(5) = 2e-049
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 510 LLTWYCTKEFARVH 469
Score = 22.1 bits (42), Expect(4) = 8e-058
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 459 IADHVRARIL 488
Score = 21.7 bits (41), Expect(3) = 1e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 83 IVQKRIRART*S 118
++ KRIRART*S
Sbjct: 499 VLYKRIRART*S 464
>gb|CW159691.1|CW159691 104_566_11149490_148_36423_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149490, DNA
sequence
Length = 659
Score = 160 bits (344), Expect(3) = 5e-057
Identities = 63/107 (58%), Positives = 74/107 (69%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVGFG+ YP+HVHHRGAS P NGV Y C GG+KWRD+KK +PN++
Sbjct: 442 QIEYILGKNPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNII 263
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++D FKD+R T GNAG L+ G G
Sbjct: 262 VGAMVAGPDRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 122
Score = 93.2 bits (197), Expect(3) = 1e-025
Identities = 42/75 (56%), Positives = 48/75 (64%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SL S+ SGP TMAP LG FL+S H PP+ TP G++APRW TC G P
Sbjct: 207 LRASLNLSWRSGPATMAPTMILGFGFLVSLHFHPPLQP**TPFLGIEAPRW*TCLG*WFP 386
Query: 518 NPTT*LIFLGLSPRM 562
NPTT*LIF G P+M
Sbjct: 387 NPTT*LIFKGFFPKM 431
Score = 74.4 bits (156), Expect(3) = 5e-057
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = -3 / -3
Query: 711 QPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
QPLQYVV +FL ++++DY+ A + PGWYCGP+F + LR FAR+Q+
Sbjct: 654 QPLQYVVNAAFLLSVFSDYLXAADTPGWYCGPHFYSIEVLRSFARTQV 511
Score = 36.8 bits (74), Expect(3) = 1e-025
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +2 / +2
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGC 712
LA RR+ + K+GPQY PG R TTY GC
Sbjct: 521 LAKLRRTSIE*KWGPQYHPGVSAAXR*SLNTESRNAALTTY*RGC 655
Score = 27.2 bits (53), Expect(3) = 5e-057
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 238 VDKNTMFSAVPHNVP 194
VDKN MFSAVP P
Sbjct: 121 VDKNAMFSAVPPMFP 77
Score = 26.3 bits (51), Expect(3) = 1e-025
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+ FLST
Sbjct: 78 GNMGGTAENIAFLST 122
>gb|CD205740.1|CD205740 HS1_18_E08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_18_E08_A012 3', mRNA sequence
Length = 601
Score = 197 bits (425), Expect(4) = 5e-057
Identities = 78/98 (79%), Positives = 82/98 (83%)
Frame = -3 / +1
Query: 546 PKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPD 367
PKKMSYVVGFG KYPRH+HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL GAMVGGPD
Sbjct: 1 PKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPD 180
Query: 366 KNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 181 RNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 294
Score = 157 bits (338), Expect(5) = 4e-048
Identities = 65/72 (90%), Positives = 66/72 (91%)
Frame = +2 / -3
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGY 508
P+VLRESLKPSFLSGPPTMAP SRLGSAFL SRHL*PPVHEYLTPL GVDAPRWC CRGY
Sbjct: 218 PKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL*PPVHEYLTPL*GVDAPRWCRCRGY 39
Query: 509 LLPNPTT*LIFL 544
LP PTT*LIFL
Sbjct: 38 FLPKPTT*LIFL 3
Score = 106 bits (226), Expect(3) = 8e-024
Identities = 47/58 (81%), Positives = 49/58 (84%)
Frame = +1 / -2
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLG 546
PADHG QQVGV L V+PLVAAGAR+LDAVVRRGRATVV VP VL AE NHVAHLLG
Sbjct: 174 PADHGARQQVGVCLLGVSPLVAAGARILDAVVRRGRATVVQVPRVLFAETNHVAHLLG 1
Score = 57.4 bits (119), Expect(4) = 8e-030
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 415 ESGPQPAGGXHGRRARQERRLQGLAQH 335
E PQPA G HGRRARQERRLQGLAQH
Sbjct: 132 EGRPQPADGRHGRRARQERRLQGLAQH 212
Score = 56.1 bits (116), Expect(4) = 8e-030
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -2 / +3
Query: 544 QEDELRGWVRQQVPTARAPPWRVH 473
QEDELRGW RQ+VP A APPWRVH
Sbjct: 3 QEDELRGWFRQKVPAAPAPPWRVH 74
Score = 50.6 bits (104), Expect(4) = 8e-030
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = -2 / +1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
FGQNEPTLV +TAVDKNTMFSAVP P
Sbjct: 214 FGQNEPTLVGNAGLVAALVALTNSGRGVGITAVDKNTMFSAVPPMFP 354
Score = 34.5 bits (69), Expect(4) = 5e-057
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 291 GSRHYRRRQEHHVLRRAA 344
Score = 33.6 bits (67), Expect(5) = 4e-048
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / -3
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 353 GNIGGTAENMVFLSTAV 303
Score = 27.2 bits (53), Expect(5) = 4e-048
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 279 GESHQGRHEAG 247
Score = 25.8 bits (50), Expect(5) = 4e-048
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 239 TSVGSFCPK 213
Score = 25.8 bits (50), Expect(4) = 5e-057
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 345 NVPCRAAAAVVMEAVS 392
Score = 25.4 bits (49), Expect(3) = 8e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 330 EHGVLVDGG 304
Score = 23.5 bits (45), Expect(4) = 8e-030
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / +3
Query: 184 ATTVIMEAMTTVNIHGHTIFCDRSR 110
A + A T V GHTIF +R R
Sbjct: 384 AVSATGSANTVVPSFGHTIFGERDR 458
Score = 23.1 bits (44), Expect(5) = 4e-048
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 505 LLTWYCTKEFARVH 464
Score = 22.1 bits (42), Expect(4) = 5e-057
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 454 IADHVRARIL 483
Score = 21.7 bits (41), Expect(3) = 8e-024
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / -3
Query: 83 IVQKRIRART*S 118
++ KRIRART*S
Sbjct: 494 VLYKRIRART*S 459
>gb|BZ338704.1|BZ338704 ia97c08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia97c08 5', DNA sequence
Length = 661
Score = 136 bits (292), Expect(2) = 1e-054
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = -3 / -3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
+GG+ALFNHGRGQPLQYVVANSFLAAL+ADYMEA+NVPGWYCGPNFM T DLR FA+SQ+
Sbjct: 317 RGGLALFNHGRGQPLQYVVANSFLAALFADYMEAINVPGWYCGPNFMPTQDLRAFAKSQV 138
Score = 102 bits (218), Expect(2) = 3e-030
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +2 / +1
Query: 566 LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
+ *DLAN+RRS V MK GPQY PGTL RKELATTYCSGCPLPWLKSA PP
Sbjct: 136 IT*DLANARRSWVGMKLGPQYHPGTLIASM*SAKRAARKELATTYCSGCPLPWLKSASPP 315
Query: 746 XGEVEGGEARK 778
+++ + RK
Sbjct: 316 LVKLKAPKRRK 348
Score = 101 bits (215), Expect(2) = 2e-033
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = +1 / +3
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPA 744
LR GE TEV+GGHEV VP GDVD LHVVG E E+GVGD VLQRLPPAVVEER PA
Sbjct: 141 LRLGERTEVLGGHEVGATVPPGDVDRLHVVGEEGGEEGVGDHVLQRLPPAVVEERQPA 314
Score = 99.1 bits (210), Expect(2) = 1e-054
Identities = 41/76 (53%), Positives = 47/76 (61%)
Frame = -2 / -3
Query: 970 DXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLN 791
D +L + AK ++LD VFSW LPGA RMFLNPGYPY SL GYH + L+
Sbjct: 539 DPQLAERAKAFDDVLDLSVFSWDNKLPGAGLLLSRLRMFLNPGYPYEQSLVGYHKESRLD 360
Query: 790 MCMYFPGFAAFNFTXG 743
MC YF F AFNFT G
Sbjct: 359 MCKYFRRFGAFNFTRG 312
Score = 62.9 bits (131), Expect(2) = 2e-033
Identities = 32/71 (45%), Positives = 37/71 (52%)
Frame = +3 / +1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLKA K KY+HM + ++LW*P S G*PGLRNM QLNT +SR
Sbjct: 319 VKLKAPKRRKYLHMSKRLSLW*PTRDCS*G*PGLRNMRSRDRSRPAPGSLLSQLNTDRSR 498
Query: 930 MLXXXLAXLGS 962
LA S
Sbjct: 499 TSSNALARSAS 531
Score = 51.0 bits (105), Expect(2) = 3e-030
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
QPRQ+Q A EL PAEH +VEDV LG LG+ VG
Sbjct: 432 QPRQEQASAGELVVPAEHGQVEDVVECLGALGELRVG 542
>gb|AW745132.1|AW745132 LG1_386_A11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 617
Score = 173 bits (373), Expect(2) = 4e-044
Identities = 66/99 (66%), Positives = 79/99 (79%)
Frame = -3 / +2
Query: 591 REFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKK 412
R+FARSQ++YILG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KK
Sbjct: 2 RKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKK 181
Query: 411 ADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
A+PN+L GAMV GPD++DG+KD R + + NAG
Sbjct: 182 ANPNILVGAMVAGPDRHDGYKDVRTNYNYSEPTLAANAG 298
Score = 26.7 bits (52), Expect(2) = 4e-044
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 350 IDKNTIFSAIPPMFP 394
>gb|CW459444.1|CW459444 fsbb001f206d04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f206d04, DNA
sequence
Length = 516
Score = 133 bits (286), Expect(2) = 6e-043
Identities = 55/77 (71%), Positives = 56/77 (72%)
Frame = -2 / -1
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK NILDF VFSW LPGAQ RMFLNPGYPY SL GYHNATSL
Sbjct: 303 TDPRLPKNAKAFFNILDFSVFSWDNKLPGAQLLLSRLRMFLNPGYPYEESLIGYHNATSL 124
Query: 793 NMCMYFPGFAAFNFTXG 743
NMCMYFP F +FNFT G
Sbjct: 123 NMCMYFPRFGSFNFTKG 73
Score = 101 bits (215), Expect(2) = 8e-033
Identities = 48/75 (64%), Positives = 48/75 (64%)
Frame = +3 / +2
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLK K GKYMHMLRLVALW*P S SYG*PGLRNM QLNT KSR
Sbjct: 80 VKLKEPKRGKYMHMLRLVALW*PMSDSSYG*PGLRNMRSRDSSSCAPGSLLSQLNTEKSR 259
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 260 MLKKALAFLGSRGSV 304
Score = 66.6 bits (139), Expect(3) = 4e-026
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = +2 / +1
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
QPRQQQL AREL PAEH EVEDV LGVLGQP VG
Sbjct: 193 QPRQQQLRARELVVPAEHREVEDVEEGLGVLGQPRVG 303
Score = 62.5 bits (130), Expect(2) = 6e-043
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3 / -1
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAA 670
KGGMALFNHG+GQPLQYVVANSF+AA
Sbjct: 78 KGGMALFNHGKGQPLQYVVANSFIAA 1
Score = 61.1 bits (127), Expect(2) = 8e-033
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2 / +2
Query: 680 KELATTYCSGCPLPWLKSAIPP 745
KELATTYCSGCPLPWLKSAIPP
Sbjct: 11 KELATTYCSGCPLPWLKSAIPP 76
Score = 52.8 bits (109), Expect(3) = 4e-026
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +1 / +1
Query: 670 RSEKGVGDDVLQRLPPAVVEERHPAL 747
R ++GVGDDVLQRLP AVVEERHP+L
Sbjct: 1 RGDEGVGDDVLQRLPLAVVEERHPSL 78
Score = 51.5 bits (106), Expect(3) = 4e-021
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -1 / -2
Query: 746 RAGWRSSTTAGGSRCSTSSPTP 681
R GWRSSTTA GSRCSTSSPTP
Sbjct: 77 REGWRSSTTARGSRCSTSSPTP 12
Score = 49.6 bits (102), Expect(3) = 4e-021
Identities = 21/40 (52%), Positives = 21/40 (52%)
Frame = -3 / -2
Query: 984 SXXXPTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
S PT GCP TPR SAG SSRA SCC RG
Sbjct: 314 SASPPTRGCPRTPRPSSTSSTSRCSAGTTSSRARSCCCRG 195
Score = 39.6 bits (80), Expect(3) = 4e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQPQHVHVL LR LQLH
Sbjct: 133 HQPQHVHVLPALRLLQLH 80
Score = 38.2 bits (77), Expect(3) = 4e-026
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1 / +3
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*R RS STCTC*GWW
Sbjct: 81 *S*RSRSAGSTCTC*GWW 134
>gb|CW407798.1|CW407798 fsbb001f101g18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101g18, DNA
sequence
Length = 838
Score = 160 bits (344), Expect(2) = 2e-040
Identities = 63/107 (58%), Positives = 74/107 (69%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVGFG+ YP+HVHHRGAS P NGV Y C GG+KWRD+KK +PN++
Sbjct: 762 QIEYILGKNPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNII 583
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++D FKD+R T GNAG L+ G G
Sbjct: 582 VGAMVAGPDRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 442
Score = 27.2 bits (53), Expect(2) = 2e-040
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 238 VDKNTMFSAVPHNVP 194
VDKN MFSAVP P
Sbjct: 441 VDKNAMFSAVPPMFP 397
>gb|CW212992.1|CW212992 104_644_11191313_116_37026_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191313, DNA
sequence
Length = 633
Score = 160 bits (344), Expect(2) = 2e-040
Identities = 63/107 (58%), Positives = 74/107 (69%)
Frame = -3 / +3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVGFG+ YP+HVHHRGAS P NGV Y C GG+KWRD+KK +PN++
Sbjct: 27 QIEYILGKNPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNII 206
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++D FKD+R T GNAG L+ G G
Sbjct: 207 VGAMVAGPDRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 347
Score = 27.2 bits (53), Expect(2) = 2e-040
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
VDKN MFSAVP P
Sbjct: 348 VDKNAMFSAVPPMFP 392
>gb|CN124667.1|CN124667 RHOH1_6_E05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_6_E05_A002 3', mRNA sequence
Length = 826
Score = 159 bits (341), Expect(2) = 8e-040
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = -3 / +1
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+YILG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L G
Sbjct: 1 DYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVG 180
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
AMV GPD++DG+KD R + + NAG
Sbjct: 181 AMVAGPDRHDGYKDVRTNYNYSEPTLAANAG 273
Score = 26.7 bits (52), Expect(2) = 8e-040
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 325 IDKNTIFSAIPPMFP 369
>gb|BG048182.1|BG048182 OV1_28_F10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 683
Score = 155 bits (333), Expect(2) = 1e-038
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = -3 / +3
Query: 561 ILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAM 382
ILG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAM
Sbjct: 3 ILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAM 182
Query: 381 VGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
V GPD++DG+KD R + + NAG
Sbjct: 183 VAGPDRHDGYKDVRTNYNYSEPTLAANAG 269
Score = 26.7 bits (52), Expect(2) = 1e-038
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 321 IDKNTIFSAIPPMFP 365
>gb|CW050340.1|CW050340 104_290_10514603_115_30205 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514603, DNA
sequence
Length = 323
Score = 122 bits (262), Expect(2) = 3e-032
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -3 / +3
Query: 726 NHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
NHGRGQPLQYVVANSFLAAL+ADYMEA+NVPGWYCGPNFM T DLR FA+SQ+
Sbjct: 3 NHGRGQPLQYVVANSFLAALFADYMEAINVPGWYCGPNFMPTQDLRAFAKSQV 161
Score = 37.7 bits (76), Expect(2) = 3e-032
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3 / +2
Query: 573 QINYILGDNPKKMSY 529
Q+NYILGDNP+KMSY
Sbjct: 278 QLNYILGDNPRKMSY 322
>gb|CF071090.1|CF071090 FE1_15_F06.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_F06_A002 3', mRNA sequence
Length = 674
Score = 128 bits (274), Expect(2) = 9e-031
Identities = 47/75 (62%), Positives = 57/75 (76%)
Frame = -3 / +1
Query: 519 FGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSR 340
FG+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD R
Sbjct: 1 FGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVR 180
Query: 339 NTSGRTSRRWSGNAG 295
+ + NAG
Sbjct: 181 TNYNYSEPTLAANAG 225
Score = 27.2 bits (53), Expect(2) = 9e-031
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2 / +1
Query: 238 VDKNTMFSAVPHNVPRRAATTVIMEAM 158
+DKNT+FSA+P P ME +
Sbjct: 277 IDKNTIFSAIPPMFPTPPPPPXSMETI 357
>gb|BI351334.1|BI351334 IP1_70_C06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 603
Score = 111 bits (238), Expect(2) = 9e-031
Identities = 46/100 (46%), Positives = 61/100 (61%)
Frame = -3 / +2
Query: 768 SPPSTSPKGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLR 589
SP +T+ + G L LQ+ +FLA +Y+DYM + C + + D+R
Sbjct: 26 SPQATASRTGGGLVWISGWNSLQHATNAAFLAVVYSDYMLSTRTAAVQCSGKYYSPTDIR 205
Query: 588 EFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
FA SQ NYILGDNP K+SY+VG+GS YP+ VHHRGAS P
Sbjct: 206 NFAASQANYILGDNPMKLSYLVGYGSSYPQQVHHRGASIP 325
Score = 43.7 bits (89), Expect(2) = 9e-031
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -3 / +2
Query: 438 GYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRT 322
G+++ S +PN+ GA+VGGP +ND F DSR+ + +T
Sbjct: 350 GFQYLHSSDPNPNVAVGALVGGPFQNDTFVDSRDNAVQT 466
>gb|BG054019.1|BG054019 OV2_1_C08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 424
Score = 126 bits (269), Expect(2) = 6e-030
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -3 / +3
Query: 519 FGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSR 340
FG+KYP+ HHRGAS PH+GVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD R
Sbjct: 3 FGNKYPKRPHHRGASIPHSGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVR 182
Query: 339 NTSGRTSRRWSGNAG 295
+ + NAG
Sbjct: 183 TNYNYSEPTLAANAG 227
Score = 26.7 bits (52), Expect(2) = 6e-030
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 279 IDKNTIFSAIPPMFP 323
>gb|CL175876.1|CL175876 104_381_10892754_148_31764_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892754, DNA
sequence
Length = 732
Score = 122 bits (262), Expect(2) = 5e-029
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = -3 / -3
Query: 513 SKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNT 334
+KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD R
Sbjct: 730 NKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTN 551
Query: 333 SGRTSRRWSGNAG 295
+ + NAG
Sbjct: 550 YNYSEPTLAANAG 512
Score = 26.7 bits (52), Expect(2) = 5e-029
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 460 IDKNTIFSAIPPMFP 416
>gb|BG101880.1|BG101880 RHIZ2_23_E10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 637
Score = 122 bits (261), Expect(2) = 7e-029
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = -3 / +3
Query: 510 KYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTS 331
KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD R
Sbjct: 3 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNY 182
Query: 330 GRTSRRWSGNAG 295
+ + NAG
Sbjct: 183 NYSEPTLAANAG 218
Score = 26.7 bits (52), Expect(2) = 7e-029
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 270 IDKNTIFSAIPPMFP 314
>gb|BF481319.1|BF481319 FM1_18_E02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 636
Score = 122 bits (261), Expect(2) = 7e-029
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = -3 / +1
Query: 510 KYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTS 331
KYP+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD R
Sbjct: 1 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNY 180
Query: 330 GRTSRRWSGNAG 295
+ + NAG
Sbjct: 181 NYSEPTLAANAG 216
Score = 26.7 bits (52), Expect(2) = 7e-029
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 268 IDKNTIFSAIPPMFP 312
>gb|CX611534.1|CX611534 ANR1_25_E10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_25_E10_A002 3', mRNA sequence
Length = 864
Score = 104 bits (221), Expect(2) = 2e-028
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = -3 / +3
Query: 684 SFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKY 505
+FLA +Y+DYM + C + + D+R FA SQ NYILGDNP K+SY+VG+GS Y
Sbjct: 15 AFLAVVYSDYMLSTRTAAVQCSGKYYSPTDIRNFAASQANYILGDNPMKLSYLVGYGSSY 194
Query: 504 PRHVHHRGASTP 469
P+ VHHRGAS P
Sbjct: 195 PQQVHHRGASIP 230
Score = 43.7 bits (89), Expect(2) = 2e-028
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -3 / +3
Query: 438 GYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRT 322
G+++ S +PN+ GA+VGGP +ND F DSR+ + +T
Sbjct: 255 GFQYLHSSDPNPNVAVGALVGGPFQNDTFVDSRDNAVQT 371
>gb|CW230234.1|CW230234 104_671_11207740_148_37266_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207740, DNA
sequence
Length = 650
Score = 126 bits (270), Expect = 5e-028
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = -2 / +2
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK NILDF VFSW LPGAQ RMFLNPGYPY SL GYHNATSL
Sbjct: 431 TDPRLPKNAKAFFNILDFSVFSWDNKLPGAQLLLSRLRMFLNPGYPYEESLIGYHNATSL 610
Query: 793 NMCMYFPGFAAFN 755
NMCMYFP F +FN
Sbjct: 611 NMCMYFPRFGSFN 649
>gb|CW214645.1|CW214645 104_646_11194123_148_37054_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194123, DNA
sequence
Length = 582
Score = 75.8 bits (159), Expect(3) = 9e-027
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = -3 / -3
Query: 624 CGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
C + ++ FARSQ +Y+LG NP+ MSY+VG+GS +P HVHHRGAS P
Sbjct: 391 CPDGEVKPGEMVRFARSQADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIP 236
Score = 54.2 bits (112), Expect(3) = 9e-027
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = -3 / -3
Query: 423 DSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
+SK ADPN+L GA+VGGPD NDGF D R + +GNA
Sbjct: 178 NSKGADPNVLQGAVVGGPDANDGFVDDRCNYQQAEPTLAGNA 53
Score = 29.9 bits (59), Expect(3) = 9e-027
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3 / -3
Query: 705 LQYVVANSFLAALYADYMEA 646
+QYV + SFL +YADY+ A
Sbjct: 469 MQYVSSASFLLTVYADYLSA 410
>gb|DR831463.2|DR831463 MM79 Sorghum bicolor greenbug-responsive cDNA library Sorghum
bicolor cDNA 5', mRNA sequence
Length = 304
Score = 115 bits (246), Expect(2) = 1e-026
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -3 / +3
Query: 504 PRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGR 325
P+ HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD+ DG+KD R
Sbjct: 3 PKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRYDGYKDVRTNYNY 182
Query: 324 TSRRWSGNAG 295
+ + NAG
Sbjct: 183 SEPTLAANAG 212
Score = 25.8 bits (50), Expect(2) = 1e-026
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 238 VDKNTMFSAVP 206
+DKNT+FSA+P
Sbjct: 264 IDKNTIFSAIP 296
>gb|BG948189.1|BG948189 IP1_10_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 654
Score = 113 bits (242), Expect(2) = 3e-026
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = -3 / +2
Query: 492 HHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRR 313
HHRGAS PHNGVKY C GGYKWRD+KKA+PN+L GAMV GPD++DG+KD R +
Sbjct: 2 HHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNYNYSEPT 181
Query: 312 WSGNAG 295
+ NAG
Sbjct: 182 LAANAG 199
Score = 26.7 bits (52), Expect(2) = 3e-026
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 238 VDKNTMFSAVPHNVP 194
+DKNT+FSA+P P
Sbjct: 251 IDKNTIFSAIPPMFP 295
>gb|CW451552.1|CW451552 fsbb001f191k19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191k19, DNA
sequence
Length = 503
Score = 75.8 bits (159), Expect(3) = 6e-026
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = -3 / -3
Query: 624 CGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
C + ++ FARSQ +Y+LG NP+ MSY+VG+GS +P HVHHRGAS P
Sbjct: 303 CPDGEVKPGEMVRFARSQADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIP 148
Score = 51.5 bits (106), Expect(3) = 6e-026
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / -3
Query: 423 DSKKADPNLLGGAMVGGPDKNDGFKDSR 340
+SK ADPN+L GA+VGGPD NDGF D R
Sbjct: 90 NSKGADPNVLQGAVVGGPDANDGFVDDR 7
Score = 29.9 bits (59), Expect(3) = 6e-026
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3 / -3
Query: 705 LQYVVANSFLAALYADYMEA 646
+QYV + SFL +YADY+ A
Sbjct: 381 MQYVSSASFLLTVYADYLSA 322
>gb|CW091140.1|CW091140 104_451_10997705_116_32541_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10997705, DNA
sequence
Length = 717
Score = 105 bits (223), Expect(2) = 5e-025
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = -3 / +2
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYV 526
LQ+ VA++FLA +Y++YM C T DLR+FA+SQ +Y+LGDNP K+SY+
Sbjct: 368 LQHPVASAFLANVYSNYMATSGKSELTCSGKSFTALDLRKFAKSQADYVLGDNPMKLSYL 547
Query: 525 VGFGSKYPRHVHHRGASTP 469
VGFG YP+ VHHRGAS P
Sbjct: 548 VGFGDTYPQRVHHRGASIP 604
Score = 31.3 bits (62), Expect(2) = 5e-025
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3 / +1
Query: 414 KADPNLLGGAMVGGPDKNDGF 352
+ P++ GA+VGGP KND F
Sbjct: 652 RPQPDVATGALVGGPFKNDSF 714
>gb|BG047859.1|BG047859 OV1_28_F10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 539
Score = 74.8 bits (157), Expect(2) = 6e-025
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = -2 / +2
Query: 925 DFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTX 746
++ VF+W LPGAQ R+FL+PGYPY L +HN T MC Y P F +FNFT
Sbjct: 248 NYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTK 427
Query: 745 G 743
G
Sbjct: 428 G 430
Score = 61.1 bits (127), Expect(2) = 6e-025
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVP 634
KGG+ NHGR QPLQY V +FLA+LY+DY+EA + P
Sbjct: 425 KGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTP 538
>gb|CW022239.1|CW022239 104_161_10431724_5_30007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431724, DNA
sequence
Length = 539
Score = 86.3 bits (182), Expect(4) = 2e-024
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = -3 / -3
Query: 417 KKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
KKADPNLL GAMVGGPD+NDGFKDSRNT G+ GNAG LT+SGRG
Sbjct: 537 KKADPNLLTGAMVGGPDRNDGFKDSRNTFGQNEPTLVGNAGLVAALVALTNSGRG 373
Score = 67.0 bits (140), Expect(5) = 7e-022
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +2 / +2
Query: 329 PEVLRESLKPSFLSGPPTMAPPSRLGSAFL 418
P+VLRESLKPSFLSGPPTMAP SRLGSAFL
Sbjct: 449 PKVLRESLKPSFLSGPPTMAPVSRLGSAFL 538
Score = 34.5 bits (69), Expect(4) = 2e-024
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 257 GELRNRRRQEHHVLRRAA 204
G RRRQEHHVLRRAA
Sbjct: 376 GSRHYRRRQEHHVLRRAA 323
Score = 33.6 bits (67), Expect(5) = 7e-022
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLSTAV 245
G + GTAENMVFLSTAV
Sbjct: 314 GNIGGTAENMVFLSTAV 364
Score = 27.2 bits (53), Expect(5) = 7e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 268 GESHQGRDEAG 300
GESHQGR EAG
Sbjct: 388 GESHQGRHEAG 420
Score = 25.8 bits (50), Expect(5) = 7e-022
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 309 TSVGSFCPK 335
TSVGSFCPK
Sbjct: 428 TSVGSFCPK 454
Score = 25.8 bits (50), Expect(4) = 2e-024
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 202 NVPRRAATTVIMEAMT 155
NVP RAA V+MEA++
Sbjct: 322 NVPCRAAAAVVMEAVS 275
Score = 23.1 bits (44), Expect(5) = 7e-022
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 70 IYVWYCTEENSRAY 111
+ WYCT+E +R +
Sbjct: 162 LLTWYCTKEFARVH 203
Score = 22.1 bits (42), Expect(4) = 2e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -3
Query: 123 VIDHVRARIL 94
+ DHVRARIL
Sbjct: 213 IADHVRARIL 184
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 940,636,707
Number of Sequences: 832831
Number of extensions: 13124732
Number of successful extensions: 132733
Number of sequences better than 1.0e-020: 69
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 34568389343
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)