TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5110719.2.1
(581 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX618130.1|CX618130 GABR1_37_H02.g1_A002 GA- or brassino... 199 4e-050
gb|CN134452.1|CN134452 OX1_26_A10.g1_A002 Oxidatively-stres... 191 9e-048
gb|BI246143.1|BI246143 IP1_67_D12.b1_A002 Immature pannicle... 167 1e-040
gb|CF489417.1|CF489417 POL1_57_A12.g1_A002 Pollen Sorghum b... 167 1e-040
gb|CF489337.1|CF489337 POL1_57_A12.b1_A002 Pollen Sorghum b... 95 2e-036
gb|CD431011.1|CD431011 ETH1_6_E01.b1_A002 Ethylene-treated ... 94 5e-036
gb|BE596022.1|BE596022 PI1_51_C12.g1_A002 Pathogen induced ... 84 5e-033
gb|CX613664.1|CX613664 GABR1_9_B04.g1_A002 GA- or brassinol... 140 1e-032
gb|BM318118.1|BM318118 PI1_78_G01.g9_A002 Pathogen induced ... 81 2e-025
gb|CD223993.1|CD223993 CCC1_31_F06.b1_A007 Callus culture/c... 81 1e-024
gb|CD224912.1|CD224912 CCC1_37_C04.b1_A007 Callus culture/c... 81 1e-024
gb|CD424074.1|CD424074 SA1_3_C09.b1_A002 Salicylic acid-tre... 81 1e-024
gb|CN143385.1|CN143385 WOUND1_16_A03.b1_A002 Wounded leaves... 81 4e-024
gb|CF481638.1|CF481638 POL1_73_D08.b1_A002 Pollen Sorghum b... 70 1e-021
>gb|CX618130.1|CX618130 GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence
Length = 832
Score = 199 bits (428), Expect = 4e-050
Identities = 86/94 (91%), Positives = 88/94 (93%)
Frame = +2 / +1
Query: 2 INNIPCKKSLAEIQTSKVYS*CFN*WEQDR*QRPRRFACRT*GILWIADI*SPQTADGGP 181
INNIPCKKSLAEIQ SK+YS*CFN*W+Q R*QRPR FACRT*GILWIADI*SPQ ADGGP
Sbjct: 550 INNIPCKKSLAEIQASKIYS*CFN*WKQSR*QRPRGFACRT*GILWIADI*SPQAADGGP 729
Query: 182 KAAARTVRSTKAAAVTN*GSGKVPPEDHRRAAAL 283
KAAARTVRSTKAAAV N*GSGKVPPEDH RAAAL
Sbjct: 730 KAAARTVRSTKAAAVAN*GSGKVPPEDH*RAAAL 831
Score = 185 bits (399), Expect = 4e-046
Identities = 79/94 (84%), Positives = 79/94 (84%)
Frame = -2 / -2
Query: 283 KRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSSPASKSP 104
KRCCSSMIFWRYFP*ASIR SRFWTSICSLRASDI NPEDPSSPA KSP
Sbjct: 831 KRCCSSMIFWRYFP*ASIRNCSCLCTSNCSCSRFWTSICSLRASDIGNPEDPSSPACKSP 652
Query: 103 GSLLSVLFPSVEASGIYFASLYFCK*LFTWYIVN 2
GSLLS LFPSVEASGIYFASLYFCK*LFTWYIVN
Sbjct: 651 GSLLSALFPSVEASGIYFASLYFCK*LFTWYIVN 550
Score = 180 bits (387), Expect = 2e-044
Identities = 77/85 (90%), Positives = 77/85 (90%)
Frame = -3 / -3
Query: 255 GGTFPEPQFVTAAAFVLLTVRAAAFGPPSAV*GLQISAIQRIPQVRQANLLGLCYRSCSH 76
GGTFPEPQF TAAAFVLLTVRAAAFGPPSA *GLQISAIQRIPQVR AN LGLCYR C H
Sbjct: 803 GGTFPEPQFATAAAFVLLTVRAAAFGPPSAA*GLQISAIQRIPQVRHANPLGLCYRLCFH 624
Query: 75 QLKHQEYTLLVCISASDFLHGILLI 1
QLKHQEY LL CISASDFLHGILLI
Sbjct: 623 QLKHQEYILLACISASDFLHGILLI 549
Score = 166 bits (358), Expect(2) = 1e-045
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +1 / +3
Query: 1 D*QYTM*KVTCRNTD*QSIFLMLQLMGTRPITKTQEICLPDLRDPLDCRYLKPSNCRWRS 180
D*QYTM*KVTCRNT *Q+IFLMLQLM T+PITKTQ IC+PDLRDPLDCRYLKPS+CRWRS
Sbjct: 549 D*QYTM*KVTCRNTG*QNIFLMLQLMETKPITKTQGICMPDLRDPLDCRYLKPSSCRWRS 728
Query: 181 KSGCTNS*KYKGSC 222
KSGCTNS*KYKGSC
Sbjct: 729 KSGCTNS*KYKGSC 770
Score = 139 bits (298), Expect = 4e-032
Identities = 61/69 (88%), Positives = 61/69 (88%)
Frame = -1 / -1
Query: 209 YF*LFVQPLLDLHLQFEGFRYLQSRGSLKSGKQISWVFVIGLVPIS*SIRNILC*SVFLQ 30
YF*LFVQPLLDLHLQ EGFRY QSRGSLKSG QI WVFVIG V IS*SIRNI C* VFLQ
Sbjct: 757 YF*LFVQPLLDLHLQLEGFRYRQSRGSLKSGMQIPWVFVIGFVSIS*SIRNIFC*PVFLQ 578
Query: 29 VTFYMVYC* 3
VTFYMVYC*
Sbjct: 577 VTFYMVYC* 551
Score = 136 bits (292), Expect = 7e-030
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKYIPDASTDGNK DNKDPGDL AGLEGSSGL ISEALKLQMEVQ
Sbjct: 551 LTIYHVKSHLQKYRLAKYIPDASTDGNKADNKDPGDLHAGLEGSSGLPISEALKLQMEVQ 730
Query: 183 K 185
K
Sbjct: 731 K 733
Score = 38.6 bits (78), Expect(2) = 1e-045
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRL 284
AQGKYLQKIIEEQQRL
Sbjct: 785 AQGKYLQKIIEEQQRL 832
>gb|CN134452.1|CN134452 OX1_26_A10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_A10_A002 5', mRNA sequence
Length = 779
Score = 191 bits (411), Expect = 9e-048
Identities = 81/88 (92%), Positives = 83/88 (94%)
Frame = +2 / +3
Query: 2 INNIPCKKSLAEIQTSKVYS*CFN*WEQDR*QRPRRFACRT*GILWIADI*SPQTADGGP 181
INNIPCKKSLAEIQ SK+YS*CFN*W+Q R*QRPR FACRT*GILWIADI*SPQ ADGGP
Sbjct: 513 INNIPCKKSLAEIQASKIYS*CFN*WKQSR*QRPRGFACRT*GILWIADI*SPQAADGGP 692
Query: 182 KAAARTVRSTKAAAVTN*GSGKVPPEDH 265
KAAARTVRSTKAAAV N*GSGKVPPEDH
Sbjct: 693 KAAARTVRSTKAAAVAN*GSGKVPPEDH 776
Score = 182 bits (392), Expect = 4e-045
Identities = 78/85 (91%), Positives = 78/85 (91%)
Frame = -3 / -2
Query: 255 GGTFPEPQFVTAAAFVLLTVRAAAFGPPSAV*GLQISAIQRIPQVRQANLLGLCYRSCSH 76
GGTFPEPQF TAAAFVLLTVRAAAFGPPSA *GLQISAIQRIPQVRQAN LGLCYR C H
Sbjct: 766 GGTFPEPQFATAAAFVLLTVRAAAFGPPSAA*GLQISAIQRIPQVRQANPLGLCYRLCFH 587
Query: 75 QLKHQEYTLLVCISASDFLHGILLI 1
QLKHQEY LL CISASDFLHGILLI
Sbjct: 586 QLKHQEYILLACISASDFLHGILLI 512
Score = 173 bits (372), Expect = 2e-042
Identities = 75/89 (84%), Positives = 75/89 (84%)
Frame = -2 / -1
Query: 268 SMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSSPASKSPGSLLS 89
SMIFWRYFP*ASIR SRFWTSICSLRASDI NPEDPSSPASKSPGSLLS
Sbjct: 779 SMIFWRYFP*ASIRNCSCLCTSNCSCSRFWTSICSLRASDIGNPEDPSSPASKSPGSLLS 600
Query: 88 VLFPSVEASGIYFASLYFCK*LFTWYIVN 2
LFPSVEASGIYFASLYFCK*LFTWYIVN
Sbjct: 599 ALFPSVEASGIYFASLYFCK*LFTWYIVN 513
Score = 167 bits (360), Expect(2) = 4e-042
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1 / +2
Query: 1 D*QYTM*KVTCRNTD*QSIFLMLQLMGTRPITKTQEICLPDLRDPLDCRYLKPSNCRWRS 180
D*QYTM*KVTCRNT *Q+IFLMLQLM T+PITKTQ ICLPDLRDPLDCRYLKPS+CRWRS
Sbjct: 512 D*QYTM*KVTCRNTG*QNIFLMLQLMETKPITKTQGICLPDLRDPLDCRYLKPSSCRWRS 691
Query: 181 KSGCTNS*KYKGSC 222
KSGCTNS*KYKGSC
Sbjct: 692 KSGCTNS*KYKGSC 733
Score = 142 bits (304), Expect = 5e-033
Identities = 62/69 (89%), Positives = 62/69 (89%)
Frame = -1 / -3
Query: 209 YF*LFVQPLLDLHLQFEGFRYLQSRGSLKSGKQISWVFVIGLVPIS*SIRNILC*SVFLQ 30
YF*LFVQPLLDLHLQ EGFRY QSRGSLKSGKQI WVFVIG V IS*SIRNI C* VFLQ
Sbjct: 720 YF*LFVQPLLDLHLQLEGFRYRQSRGSLKSGKQIPWVFVIGFVSIS*SIRNIFC*PVFLQ 541
Query: 29 VTFYMVYC* 3
VTFYMVYC*
Sbjct: 540 VTFYMVYC* 514
Score = 139 bits (299), Expect = 8e-031
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKYIPDASTDGNK DNKDPGDLLAGLEGSSGL ISEALKLQMEVQ
Sbjct: 514 LTIYHVKSHLQKYRLAKYIPDASTDGNKADNKDPGDLLAGLEGSSGLPISEALKLQMEVQ 693
Query: 183 K 185
K
Sbjct: 694 K 696
Score = 25.4 bits (49), Expect(2) = 4e-042
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 237 AQGKYLQKII 266
AQGKYLQKII
Sbjct: 748 AQGKYLQKII 777
>gb|BI246143.1|BI246143 IP1_67_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 489
Score = 167 bits (360), Expect = 1e-040
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1 / +1
Query: 1 D*QYTM*KVTCRNTD*QSIFLMLQLMGTRPITKTQEICLPDLRDPLDCRYLKPSNCRWRS 180
D*QYTM*KVTCRNT *Q+IFLMLQLM T+PITKTQ ICLPDLRDPLDCRYLKPS+CRWRS
Sbjct: 256 D*QYTM*KVTCRNTG*QNIFLMLQLMETKPITKTQGICLPDLRDPLDCRYLKPSSCRWRS 435
Query: 181 KSGCTNS*KYKGSC 222
KSGCTNS*KYKGSC
Sbjct: 436 KSGCTNS*KYKGSC 477
Score = 164 bits (352), Expect = 1e-039
Identities = 70/77 (90%), Positives = 72/77 (93%)
Frame = +2 / +2
Query: 2 INNIPCKKSLAEIQTSKVYS*CFN*WEQDR*QRPRRFACRT*GILWIADI*SPQTADGGP 181
INNIPCKKSLAEIQ SK+YS*CFN*W+Q R*QRPR FACRT*GILWIADI*SPQ ADGGP
Sbjct: 257 INNIPCKKSLAEIQASKIYS*CFN*WKQSR*QRPRGFACRT*GILWIADI*SPQAADGGP 436
Query: 182 KAAARTVRSTKAAAVTN 232
KAAARTVRSTKAAAV N
Sbjct: 437 KAAARTVRSTKAAAVAN 487
Score = 163 bits (350), Expect = 2e-039
Identities = 71/78 (91%), Positives = 71/78 (91%)
Frame = -3 / -1
Query: 234 QFVTAAAFVLLTVRAAAFGPPSAV*GLQISAIQRIPQVRQANLLGLCYRSCSHQLKHQEY 55
QF TAAAFVLLTVRAAAFGPPSA *GLQISAIQRIPQVRQAN LGLCYR C HQLKHQEY
Sbjct: 489 QFATAAAFVLLTVRAAAFGPPSAA*GLQISAIQRIPQVRQANPLGLCYRLCFHQLKHQEY 310
Query: 54 TLLVCISASDFLHGILLI 1
LL CISASDFLHGILLI
Sbjct: 309 ILLACISASDFLHGILLI 256
Score = 145 bits (312), Expect = 4e-034
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = -2 / -3
Query: 187 RFWTSICSLRASDICNPEDPSSPASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYI 8
RFWTSICSLRASDI NPEDPSSPASKSPGSLLS LFPSVEASGIYFASLYFCK*LFTWYI
Sbjct: 442 RFWTSICSLRASDIGNPEDPSSPASKSPGSLLSALFPSVEASGIYFASLYFCK*LFTWYI 263
Query: 7 VN 2
VN
Sbjct: 262 VN 257
Score = 142 bits (304), Expect = 5e-033
Identities = 62/69 (89%), Positives = 62/69 (89%)
Frame = -1 / -2
Query: 209 YF*LFVQPLLDLHLQFEGFRYLQSRGSLKSGKQISWVFVIGLVPIS*SIRNILC*SVFLQ 30
YF*LFVQPLLDLHLQ EGFRY QSRGSLKSGKQI WVFVIG V IS*SIRNI C* VFLQ
Sbjct: 464 YF*LFVQPLLDLHLQLEGFRYRQSRGSLKSGKQIPWVFVIGFVSIS*SIRNIFC*PVFLQ 285
Query: 29 VTFYMVYC* 3
VTFYMVYC*
Sbjct: 284 VTFYMVYC* 258
Score = 139 bits (299), Expect = 8e-031
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +3 / +3
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKYIPDASTDGNK DNKDPGDLLAGLEGSSGL ISEALKLQMEVQ
Sbjct: 258 LTIYHVKSHLQKYRLAKYIPDASTDGNKADNKDPGDLLAGLEGSSGLPISEALKLQMEVQ 437
Query: 183 K 185
K
Sbjct: 438 K 440
>gb|CF489417.1|CF489417 POL1_57_A12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_A12_A002 5', mRNA sequence
Length = 777
Score = 167 bits (360), Expect = 1e-040
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1 / +2
Query: 1 D*QYTM*KVTCRNTD*QSIFLMLQLMGTRPITKTQEICLPDLRDPLDCRYLKPSNCRWRS 180
D*QYTM*KVTCRNT *Q+IFLMLQLM T+PITKTQ ICLPDLRDPLDCRYLKPS+CRWRS
Sbjct: 554 D*QYTM*KVTCRNTG*QNIFLMLQLMETKPITKTQGICLPDLRDPLDCRYLKPSSCRWRS 733
Query: 181 KSGCTNS*KYKGSC 222
KSGCTNS*KYKGSC
Sbjct: 734 KSGCTNS*KYKGSC 775
Score = 159 bits (342), Expect = 3e-038
Identities = 68/74 (91%), Positives = 70/74 (94%)
Frame = +2 / +3
Query: 2 INNIPCKKSLAEIQTSKVYS*CFN*WEQDR*QRPRRFACRT*GILWIADI*SPQTADGGP 181
INNIPCKKSLAEIQ SK+YS*CFN*W+Q R*QRPR FACRT*GILWIADI*SPQ ADGGP
Sbjct: 555 INNIPCKKSLAEIQASKIYS*CFN*WKQSR*QRPRGFACRT*GILWIADI*SPQAADGGP 734
Query: 182 KAAARTVRSTKAAA 223
KAAARTVRSTKAAA
Sbjct: 735 KAAARTVRSTKAAA 776
Score = 155 bits (334), Expect = 4e-037
Identities = 68/74 (91%), Positives = 68/74 (91%)
Frame = -3 / -3
Query: 222 AAAFVLLTVRAAAFGPPSAV*GLQISAIQRIPQVRQANLLGLCYRSCSHQLKHQEYTLLV 43
AAAFVLLTVRAAAFGPPSA *GLQISAIQRIPQVRQAN LGLCYR C HQLKHQEY LL
Sbjct: 775 AAAFVLLTVRAAAFGPPSAA*GLQISAIQRIPQVRQANPLGLCYRLCFHQLKHQEYILLA 596
Query: 42 CISASDFLHGILLI 1
CISASDFLHGILLI
Sbjct: 595 CISASDFLHGILLI 554
Score = 145 bits (312), Expect = 4e-034
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = -2 / -2
Query: 187 RFWTSICSLRASDICNPEDPSSPASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYI 8
RFWTSICSLRASDI NPEDPSSPASKSPGSLLS LFPSVEASGIYFASLYFCK*LFTWYI
Sbjct: 740 RFWTSICSLRASDIGNPEDPSSPASKSPGSLLSALFPSVEASGIYFASLYFCK*LFTWYI 561
Query: 7 VN 2
VN
Sbjct: 560 VN 555
Score = 142 bits (304), Expect = 5e-033
Identities = 62/69 (89%), Positives = 62/69 (89%)
Frame = -1 / -1
Query: 209 YF*LFVQPLLDLHLQFEGFRYLQSRGSLKSGKQISWVFVIGLVPIS*SIRNILC*SVFLQ 30
YF*LFVQPLLDLHLQ EGFRY QSRGSLKSGKQI WVFVIG V IS*SIRNI C* VFLQ
Sbjct: 762 YF*LFVQPLLDLHLQLEGFRYRQSRGSLKSGKQIPWVFVIGFVSIS*SIRNIFC*PVFLQ 583
Query: 29 VTFYMVYC* 3
VTFYMVYC*
Sbjct: 582 VTFYMVYC* 556
Score = 139 bits (299), Expect = 8e-031
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKYIPDASTDGNK DNKDPGDLLAGLEGSSGL ISEALKLQMEVQ
Sbjct: 556 LTIYHVKSHLQKYRLAKYIPDASTDGNKADNKDPGDLLAGLEGSSGLPISEALKLQMEVQ 735
Query: 183 K 185
K
Sbjct: 736 K 738
>gb|CF489337.1|CF489337 POL1_57_A12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_A12_A002 3', mRNA sequence
Length = 695
Score = 95.0 bits (201), Expect(2) = 2e-036
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = -1 / -2
Query: 467 MTGALGCFSSVSSVPIGSTNLSWRLGCWCRCGGLSPLRVWELIT*Y 330
MTGALG FSS+S VPIGSTNLSWRLGCWCR GLSPL V ELIT*Y
Sbjct: 139 MTGALGSFSSISGVPIGSTNLSWRLGCWCRSRGLSPLGVRELIT*Y 2
Score = 93.2 bits (197), Expect(2) = 1e-030
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = -3 / -1
Query: 468 HDRCSWLLQFGLQCPYWKHQLELETRMLVQVWRAQSAPSLGIDHLI 331
HDRCSW LQF L+ PYWKHQLELETRMLVQ RAQSA S GIDHLI
Sbjct: 140 HDRCSWFLQFDLRGPYWKHQLELETRMLVQESRAQSARSQGIDHLI 3
Score = 90.4 bits (191), Expect(2) = 2e-028
Identities = 43/46 (93%), Positives = 43/46 (93%)
Frame = -2 / -3
Query: 466 *QVLLVASVRSPVSLLEAPT*VGDSDAGAGVEGSVRSESGN*SLDT 329
*QVLLV SVRSP SLLEAPT*VGDSD GAGVEGSVRSESGN*SLDT
Sbjct: 138 *QVLLVPSVRSPGSLLEAPT*VGDSDVGAGVEGSVRSESGN*SLDT 1
Score = 89.0 bits (188), Expect(2) = 2e-034
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +1 / +3
Query: 331 YQVINSQTRSGLSPPHLHQHPSLQLKLVLPIGTLETELKQPRAPVM 468
YQVINS T SGLSP LHQHPSLQLKLVLPIGT E ELK+PRAPVM
Sbjct: 3 YQVINSLTPSGLSPRLLHQHPSLQLKLVLPIGTPEIELKEPRAPVM 140
Score = 80.8 bits (170), Expect(2) = 2e-034
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +2
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 119 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 232
Score = 78.5 bits (165), Expect(2) = 2e-036
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -3
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 231 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 139
Score = 77.6 bits (163), Expect(2) = 1e-022
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2 / +1
Query: 332 IK*SIPRLGAD*ALHTCTSIRVSNSSWCFQ*GHWRPN*SNQEHLS 466
IK*SIP L AD*AL +CT+IRVSNSSWCFQ*G R N* NQEHLS
Sbjct: 4 IK*SIP*LRAD*ALDSCTNIRVSNSSWCFQ*GPRRSN*RNQEHLS 138
Score = 60.6 bits (126), Expect(2) = 1e-030
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = -1 / -2
Query: 581 TTASLPLGCPFMVWTSDRRTVLAVGIRG*WLVAG 480
TTA LPL CP MVWTS+ R +LAVGI G*WL+ G
Sbjct: 232 TTAPLPLCCPLMVWTSNGRAILAVGIGG*WLMTG 131
Score = 56.1 bits (116), Expect(2) = 2e-028
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -3 / -1
Query: 579 HCLAASWLPFHGLD*RQENRSGSWNQGLVA 490
HC AAS LP HGLD*++E+ SGSWN+GLVA
Sbjct: 230 HCPAASLLPSHGLD*QRESHSGSWNRGLVA 141
Score = 49.6 bits (102), Expect(2) = 1e-022
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 481 PATSH*PLIPTARTVLLSLVQTMKGQPRGSEAV 579
P SH*P IPTAR L LVQTM+GQ RGS AV
Sbjct: 132 PVMSH*PPIPTARMALPLLVQTMRGQQRGSGAV 230
>gb|CD431011.1|CD431011 ETH1_6_E01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_E01_A002 3', mRNA sequence
Length = 690
Score = 93.6 bits (198), Expect(2) = 5e-036
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -1 / -3
Query: 467 MTGALGCFSSVSSVPIGSTNLSWRLGCWCRCGGLSPLRVWELIT*Y 330
MTGALG FSS+S VPIGSTNLSWRLGCWC+ GLSPL V ELIT*Y
Sbjct: 139 MTGALGSFSSISGVPIGSTNLSWRLGCWCKSRGLSPLGVRELIT*Y 2
Score = 93.2 bits (197), Expect(2) = 1e-030
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = -3 / -2
Query: 468 HDRCSWLLQFGLQCPYWKHQLELETRMLVQVWRAQSAPSLGIDHLI 331
HDRCSW LQF L+ PYWKHQLELETRMLVQ RAQSA S GIDHLI
Sbjct: 140 HDRCSWFLQFDLRGPYWKHQLELETRMLVQESRAQSARSQGIDHLI 3
Score = 89.0 bits (188), Expect(2) = 2e-034
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +1 / +3
Query: 331 YQVINSQTRSGLSPPHLHQHPSLQLKLVLPIGTLETELKQPRAPVM 468
YQVINS T SGLSP LHQHPSLQLKLVLPIGT E ELK+PRAPVM
Sbjct: 3 YQVINSLTPSGLSPRLLHQHPSLQLKLVLPIGTPEIELKEPRAPVM 140
Score = 86.8 bits (183), Expect(2) = 3e-027
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 466 *QVLLVASVRSPVSLLEAPT*VGDSDAGAGVEGSVRSESGN*SLDT 329
*QVLLV SVRSP SLLEAPT*VGDSD GA VEGSVRSESGN*SLDT
Sbjct: 138 *QVLLVPSVRSPGSLLEAPT*VGDSDVGARVEGSVRSESGN*SLDT 1
Score = 80.8 bits (170), Expect(2) = 2e-034
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +2
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 119 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 232
Score = 78.5 bits (165), Expect(2) = 5e-036
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -1
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 231 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 139
Score = 77.6 bits (163), Expect(2) = 1e-022
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2 / +1
Query: 332 IK*SIPRLGAD*ALHTCTSIRVSNSSWCFQ*GHWRPN*SNQEHLS 466
IK*SIP L AD*AL +CT+IRVSNSSWCFQ*G R N* NQEHLS
Sbjct: 4 IK*SIP*LRAD*ALDSCTNIRVSNSSWCFQ*GPRRSN*RNQEHLS 138
Score = 60.6 bits (126), Expect(2) = 1e-030
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = -1 / -3
Query: 581 TTASLPLGCPFMVWTSDRRTVLAVGIRG*WLVAG 480
TTA LPL CP MVWTS+ R +LAVGI G*WL+ G
Sbjct: 232 TTAPLPLCCPLMVWTSNGRAILAVGIGG*WLMTG 131
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -3 / -2
Query: 579 HCLAASWLPFHGLD*RQENRSGSWNQGLVA 490
HC AAS LP HGLD*++E+ SGSWN+GLVA
Sbjct: 230 HCPAASLLPSHGLD*QRESHSGSWNRGLVA 141
Score = 49.6 bits (102), Expect(2) = 1e-022
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 481 PATSH*PLIPTARTVLLSLVQTMKGQPRGSEAV 579
P SH*P IPTAR L LVQTM+GQ RGS AV
Sbjct: 132 PVMSH*PPIPTARMALPLLVQTMRGQQRGSGAV 230
>gb|BE596022.1|BE596022 PI1_51_C12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 627
Score = 83.5 bits (176), Expect(2) = 5e-033
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = -1 / -1
Query: 467 MTGALGCFSSVSSVPIGSTNLSWRLGCWCRCGGLSPL 357
MTGALG FSS+S VPIGSTNLSWRLGCWCR GLSPL
Sbjct: 111 MTGALGSFSSISGVPIGSTNLSWRLGCWCRSRGLSPL 1
Score = 80.8 bits (170), Expect(2) = 3e-030
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 91 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 204
Score = 78.5 bits (165), Expect(2) = 3e-026
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = -3 / -3
Query: 468 HDRCSWLLQFGLQCPYWKHQLELETRMLVQVWRAQSA 358
HDRCSW LQF L+ PYWKHQLELETRMLVQ RAQSA
Sbjct: 112 HDRCSWFLQFDLRGPYWKHQLELETRMLVQESRAQSA 2
Score = 78.5 bits (165), Expect(2) = 5e-033
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -2
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 203 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 111
Score = 74.8 bits (157), Expect(2) = 3e-030
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1 / +2
Query: 358 SGLSPPHLHQHPSLQLKLVLPIGTLETELKQPRAPVM 468
SGLSP LHQHPSLQLKLVLPIGT E ELK+PRAPVM
Sbjct: 2 SGLSPRLLHQHPSLQLKLVLPIGTPEIELKEPRAPVM 112
Score = 69.8 bits (146), Expect(2) = 3e-022
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = -2 / -2
Query: 466 *QVLLVASVRSPVSLLEAPT*VGDSDAGAGVEGSVR 359
*QVLLV SVRSP SLLEAPT*VGDSD GAGVEGSVR
Sbjct: 110 *QVLLVPSVRSPGSLLEAPT*VGDSDVGAGVEGSVR 3
Score = 60.6 bits (126), Expect(2) = 3e-026
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = -1 / -1
Query: 581 TTASLPLGCPFMVWTSDRRTVLAVGIRG*WLVAG 480
TTA LPL CP MVWTS+ R +LAVGI G*WL+ G
Sbjct: 204 TTAPLPLCCPLMVWTSNGRAILAVGIGG*WLMTG 103
Score = 56.1 bits (116), Expect(2) = 3e-022
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -3 / -3
Query: 579 HCLAASWLPFHGLD*RQENRSGSWNQGLVA 490
HC AAS LP HGLD*++E+ SGSWN+GLVA
Sbjct: 202 HCPAASLLPSHGLD*QRESHSGSWNRGLVA 113
>gb|CX613664.1|CX613664 GABR1_9_B04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_B04_A002 5', mRNA sequence
Length = 724
Score = 140 bits (301), Expect = 1e-032
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = -2 / -3
Query: 181 WTSICSLRASDICNPEDPSSPASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIVN 2
WTSICSLRASDI NPEDPSSPASKSPGSLLS LFPSVEASGIYFASLYFCK*LFTWYIVN
Sbjct: 722 WTSICSLRASDIGNPEDPSSPASKSPGSLLSALFPSVEASGIYFASLYFCK*LFTWYIVN 543
Score = 137 bits (294), Expect = 4e-030
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKYIPDASTDGNK DNKDPGDLLAGLEGSSGL ISEALKLQMEVQ
Sbjct: 544 LTIYHVKSHLQKYRLAKYIPDASTDGNKADNKDPGDLLAGLEGSSGLPISEALKLQMEVQ 723
Score = 135 bits (289), Expect = 6e-031
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +1 / +2
Query: 1 D*QYTM*KVTCRNTD*QSIFLMLQLMGTRPITKTQEICLPDLRDPLDCRYLKPSNCRWRS 180
D*QYTM*KVTCRNT *Q+IFLMLQLM T+PITKTQ ICLPDLRDPLDCRYLKPS+CRWRS
Sbjct: 542 D*QYTM*KVTCRNTG*QNIFLMLQLMETKPITKTQGICLPDLRDPLDCRYLKPSSCRWRS 721
Query: 181 K 183
K
Sbjct: 722 K 724
Score = 131 bits (280), Expect = 1e-029
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = +2 / +3
Query: 2 INNIPCKKSLAEIQTSKVYS*CFN*WEQDR*QRPRRFACRT*GILWIADI*SPQTADGGP 181
INNIPCKKSLAEIQ SK+YS*CFN*W+Q R*QRPR FACRT*GILWIADI*SPQ ADGGP
Sbjct: 543 INNIPCKKSLAEIQASKIYS*CFN*WKQSR*QRPRGFACRT*GILWIADI*SPQAADGGP 722
Score = 130 bits (278), Expect = 2e-029
Identities = 55/61 (90%), Positives = 55/61 (90%)
Frame = -3 / -1
Query: 183 FGPPSAV*GLQISAIQRIPQVRQANLLGLCYRSCSHQLKHQEYTLLVCISASDFLHGILL 4
FGPPSA *GLQISAIQRIPQVRQAN LGLCYR C HQLKHQEY LL CISASDFLHGILL
Sbjct: 724 FGPPSAA*GLQISAIQRIPQVRQANPLGLCYRLCFHQLKHQEYILLACISASDFLHGILL 545
Query: 3 I 1
I
Sbjct: 544 I 542
Score = 122 bits (260), Expect = 6e-027
Identities = 53/60 (88%), Positives = 53/60 (88%)
Frame = -1 / -2
Query: 182 LDLHLQFEGFRYLQSRGSLKSGKQISWVFVIGLVPIS*SIRNILC*SVFLQVTFYMVYC* 3
LDLHLQ EGFRY QSRGSLKSGKQI WVFVIG V IS*SIRNI C* VFLQVTFYMVYC*
Sbjct: 723 LDLHLQLEGFRYRQSRGSLKSGKQIPWVFVIGFVSIS*SIRNIFC*PVFLQVTFYMVYC* 544
>gb|BM318118.1|BM318118 PI1_78_G01.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 593
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +2
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 53 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 166
Score = 78.5 bits (165), Expect(2) = 2e-025
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -3
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 165 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 73
Score = 57.9 bits (120), Expect(2) = 2e-025
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 468 HDRCSWLLQFGLQCPYWKHQLELE 397
HDRCSW LQF L+ PYWKHQLELE
Sbjct: 74 HDRCSWFLQFDLRGPYWKHQLELE 3
Score = 49.6 bits (102), Expect(2) = 3e-022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 405 QVGASNRDTGDRTEATKSTCH 467
QVGASNRD GDRTE TKSTCH
Sbjct: 11 QVGASNRDPGDRTEGTKSTCH 73
>gb|CD223993.1|CD223993 CCC1_31_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_F06_A007 3', mRNA sequence
Length = 641
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 49 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 162
Score = 78.5 bits (165), Expect(2) = 1e-024
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -1
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 161 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 69
Score = 55.6 bits (115), Expect(2) = 1e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 468 HDRCSWLLQFGLQCPYWKHQLEL 400
HDRCSW LQF L+ PYWKHQLEL
Sbjct: 70 HDRCSWFLQFDLRGPYWKHQLEL 2
Score = 49.6 bits (102), Expect(2) = 3e-022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 405 QVGASNRDTGDRTEATKSTCH 467
QVGASNRD GDRTE TKSTCH
Sbjct: 7 QVGASNRDPGDRTEGTKSTCH 69
>gb|CD224912.1|CD224912 CCC1_37_C04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_C04_A007 3', mRNA sequence
Length = 640
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 49 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 162
Score = 78.5 bits (165), Expect(2) = 1e-024
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -3
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 161 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 69
Score = 55.6 bits (115), Expect(2) = 1e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 468 HDRCSWLLQFGLQCPYWKHQLEL 400
HDRCSW LQF L+ PYWKHQLEL
Sbjct: 70 HDRCSWFLQFDLRGPYWKHQLEL 2
Score = 49.6 bits (102), Expect(2) = 3e-022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 405 QVGASNRDTGDRTEATKSTCH 467
QVGASNRD GDRTE TKSTCH
Sbjct: 7 QVGASNRDPGDRTEGTKSTCH 69
>gb|CD424074.1|CD424074 SA1_3_C09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_3_C09_A002 3', mRNA sequence
Length = 577
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 49 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 162
Score = 78.5 bits (165), Expect(2) = 1e-024
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -3
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 161 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 69
Score = 55.6 bits (115), Expect(2) = 1e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 468 HDRCSWLLQFGLQCPYWKHQLEL 400
HDRCSW LQF L+ PYWKHQLEL
Sbjct: 70 HDRCSWFLQFDLRGPYWKHQLEL 2
Score = 49.6 bits (102), Expect(2) = 3e-022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 405 QVGASNRDTGDRTEATKSTCH 467
QVGASNRD GDRTE TKSTCH
Sbjct: 7 QVGASNRDPGDRTEGTKSTCH 69
>gb|CN143385.1|CN143385 WOUND1_16_A03.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_16_A03_A002 3', mRNA sequence
Length = 679
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3 / +2
Query: 468 GDSLSRNEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 581
G + +EPLTPDSNCQNGSPVASPNHERAAKRQRGSG
Sbjct: 47 GTKSTCHEPLTPDSNCQNGSPVASPNHERAAKRQRGSG 160
Score = 78.5 bits (165), Expect(2) = 4e-024
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2 / -2
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESGVSGS 488
PLPRCL AALSWFGLATGEPFWQLESGVSGS
Sbjct: 159 PLPRCLFAALSWFGLATGEPFWQLESGVSGS 67
Score = 53.8 bits (111), Expect(2) = 4e-024
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / -3
Query: 468 HDRCSWLLQFGLQCPYWKHQLE 403
HDRCSW LQF L+ PYWKHQLE
Sbjct: 68 HDRCSWFLQFDLRGPYWKHQLE 3
Score = 49.6 bits (102), Expect(2) = 3e-022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 405 QVGASNRDTGDRTEATKSTCH 467
QVGASNRD GDRTE TKSTCH
Sbjct: 5 QVGASNRDPGDRTEGTKSTCH 67
>gb|CF481638.1|CF481638 POL1_73_D08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_73_D08_A002 3', mRNA sequence
Length = 619
Score = 70.3 bits (147), Expect(2) = 1e-021
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -2 / -3
Query: 580 PLPRCLLAALSWFGLATGEPFWQLESG 500
PLPRCL AALSWFGLATGEPFWQLESG
Sbjct: 158 PLPRCLFAALSWFGLATGEPFWQLESG 78
Score = 53.8 bits (111), Expect(2) = 1e-021
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / -2
Query: 468 HDRCSWLLQFGLQCPYWKHQLE 403
HDRCSW LQF L+ PYWKHQLE
Sbjct: 66 HDRCSWFLQFDLRGPYWKHQLE 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 733,944,930
Number of Sequences: 832831
Number of extensions: 10857188
Number of successful extensions: 117020
Number of sequences better than 1.0e-020: 14
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 16750511820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)