TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4005867.2.1
(1967 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorgh... 365 1e-099
gb|CF486088.1|CF486088 POL1_35_D06.g1_A002 Pollen Sorghum b... 328 2e-088
gb|CL182214.1|CL182214 104_393_10897273_116_31922_265 Sorgh... 274 4e-072
gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation... 153 4e-071
gb|CW057246.1|CW057246 104_299_10518117_115_30171 Sorghum m... 264 3e-069
gb|CW192233.1|CW192233 104_614_11178915_116_36943_006 Sorgh... 256 1e-066
gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation... 253 7e-066
gb|CW321706.1|CW321706 104_815_11475696_148_35943_094 Sorgh... 218 1e-065
gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum b... 251 2e-065
gb|CL150595.1|CL150595 104_332_10778646_114_31357_198 Sorgh... 249 8e-065
gb|CW340403.1|CW340403 104_841_11485781_148_36147_023 Sorgh... 159 2e-061
gb|CW340402.1|CW340402 104_841_11485781_116_36146_023 Sorgh... 130 9e-060
gb|CW089034.1|CW089034 104_434_10948469_114_32601_027 Sorgh... 130 4e-059
gb|CW369334.1|CW369334 fsbb001f043l06f0 Sorghum methylation... 171 2e-058
gb|CW443774.1|CW443774 fsbb001f164a20k0 Sorghum methylation... 222 2e-056
gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorgh... 207 2e-056
gb|CL176112.1|CL176112 104_382_10892904_116_31763_120 Sorgh... 149 3e-053
gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorgh... 198 5e-053
gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorgh... 138 1e-052
gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sor... 115 1e-052
gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorgh... 114 1e-052
gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation... 114 2e-051
gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sor... 119 1e-050
gb|CW281478.1|CW281478 104_757_11408201_116_35463_077 Sorgh... 193 1e-050
gb|CW172749.1|CW172749 104_584_11156458_148_36543_045 Sorgh... 199 9e-050
gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorgh... 108 2e-049
gb|CW349543.1|CW349543 fsbb001f010h01k0 Sorghum methylation... 142 7e-049
gb|CW468784.1|CW468784 fsbb001f221c20f0 Sorghum methylation... 166 1e-047
gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorgh... 127 6e-047
gb|CW241951.1|CW241951 104_701_11219058_148_37553_073 Sorgh... 133 2e-044
gb|CW261864.1|CW261864 104_729_11229744_148_35206_094 Sorgh... 122 4e-043
gb|CW357408.1|CW357408 fsbb001f024a20k0 Sorghum methylation... 160 7e-043
gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots ... 114 2e-042
gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation... 126 2e-042
gb|CW339306.1|CW339306 104_840_11485203_148_36139_016 Sorgh... 162 1e-041
gb|CW374999.1|CW374999 fsbb001f052c13f0 Sorghum methylation... 105 2e-041
gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorgh... 103 2e-040
gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorgh... 87 3e-040
gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedl... 153 3e-040
gb|CW433383.1|CW433383 fsbb001f148j05f0 Sorghum methylation... 133 7e-040
gb|BG356421.1|BG356421 EM1_22_D02.g1_A002 Embryo 1 (EM1) So... 166 8e-040
gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkal... 151 1e-039
gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation... 100 6e-039
gb|CW152394.1|CW152394 104_553_11144468_116_36324_070 Sorgh... 157 8e-039
gb|CW152395.1|CW152395 104_553_11144468_148_36328_070 Sorgh... 157 8e-039
gb|CW143842.1|CW143842 104_535_11137628_148_34959_068 Sorgh... 161 4e-038
gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots ... 146 4e-038
gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed see... 146 4e-038
gb|CW171322.1|CW171322 104_582_11155677_116_36529_095 Sorgh... 106 5e-038
gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stres... 131 8e-038
gb|CW143841.1|CW143841 104_535_11137628_116_34955_068 Sorgh... 157 4e-037
gb|CW419544.1|CW419544 fsbb001f124h07f0 Sorghum methylation... 122 5e-037
gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorgh... 91 9e-037
gb|CD205907.1|CD205907 HS1_19_G06.b1_A012 Heat-shocked seed... 143 1e-036
gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (L... 140 2e-036
gb|CW172298.1|CW172298 104_583_11156215_116_36533_024 Sorgh... 155 2e-036
gb|BF421213.1|BF421213 FM1_6_H03.b1_A003 Floral-Induced Mer... 152 1e-035
gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/ce... 107 2e-035
gb|CL148344.1|CL148344 104_328_10593029_148_31782_153 Sorgh... 78 4e-035
gb|CW216947.1|CW216947 104_650_11195395_116_37129_080 Sorgh... 149 2e-034
gb|BG240041.1|BG240041 OV1_17_B10.b1_A002 Ovary 1 (OV1) Sor... 148 4e-034
gb|CW121987.1|CW121987 104_500_11110291_116_34665_074 Sorgh... 122 2e-033
gb|CW350958.1|CW350958 fsbb001f012i07k0 Sorghum methylation... 107 4e-033
gb|CN126550.1|CN126550 RHOH1_17_G08.g1_A002 Acid- and alkal... 83 8e-033
gb|CW107343.1|CW107343 104_477_11096531_148_34472_040 Sorgh... 142 2e-032
gb|CD233100.1|CD233100 SS1_11_H04.g1_A012 Salt-stressed see... 134 5e-032
gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorgh... 136 7e-032
gb|CW266134.1|CW266134 104_735_11232263_116_35269_084 Sorgh... 140 8e-032
gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots S... 136 1e-031
gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sor... 103 1e-031
gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sor... 103 3e-031
gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation... 127 7e-031
gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1... 127 7e-031
gb|CW481932.1|CW481932 fsbb001f241m07f0 Sorghum methylation... 102 1e-030
gb|CW463110.1|CW463110 fsbb001f211i20f0 Sorghum methylation... 134 5e-030
gb|CL179897.1|CL179897 104_389_10895624_116_31908_152 Sorgh... 81 3e-029
gb|CL180812.1|CL180812 104_391_10896290_116_31928_050 Sorgh... 130 6e-029
gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedl... 126 7e-029
gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Mer... 103 9e-029
gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sor... 106 1e-028
gb|CN126747.1|CN126747 RHOH1_19_A03.b1_A002 Acid- and alkal... 86 2e-028
gb|CW064932.1|CW064932 104_311_10522850_114_30122 Sorghum m... 127 6e-028
gb|CW467467.1|CW467467 fsbb001f219c19f0 Sorghum methylation... 110 6e-028
gb|CW200385.1|CW200385 104_625_11184038_148_36863_049 Sorgh... 64 8e-028
gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation... 126 1e-027
gb|CW396145.1|CW396145 fsbb001f084h12k0 Sorghum methylation... 126 1e-027
gb|BG355811.1|BG355811 EM1_17_A06.g1_A002 Embryo 1 (EM1) So... 107 2e-027
gb|CD233140.1|CD233140 SS1_12_A05.b1_A012 Salt-stressed see... 81 4e-027
gb|CW261457.1|CW261457 104_728_11229521_116_35174_069 Sorgh... 92 8e-027
gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sor... 99 8e-027
gb|CW084628.1|CW084628 104_427_10945909_114_32507_055 Sorgh... 93 9e-027
gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated... 107 1e-026
gb|BZ344309.1|BZ344309 hp62c02.b2 WGS-SbicolorF (JM107 adap... 122 1e-026
gb|CW420842.1|CW420842 fsbb001f128f22f0 Sorghum methylation... 78 3e-026
gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorgh... 108 4e-026
gb|CW263791.1|CW263791 104_732_11230914_148_35236_075 Sorgh... 74 1e-025
gb|CW137808.1|CW137808 104_525_11119866_116_34879_075 Sorgh... 78 1e-025
gb|CL159327.1|CL159327 104_348_10804169_116_31380_377 Sorgh... 73 2e-025
gb|CW224677.1|CW224677 104_662_11203952_148_37205_032 Sorgh... 73 2e-025
gb|BG412790.1|BG412790 OV2_34_H02.b1_A002 Ovary 2 (OV2) Sor... 118 3e-025
gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation... 57 4e-025
gb|CW489322.1|CW489322 fsbb001f274d02k0 Sorghum methylation... 95 5e-025
gb|CN124984.1|CN124984 RHOH1_8_D12.b1_A002 Acid- and alkali... 85 5e-025
gb|CW104209.1|CW104209 104_473_11012308_116_34443_012 Sorgh... 78 1e-024
gb|CW076050.1|CW076050 104_364_10810303_114_31802_367 Sorgh... 115 2e-024
gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed see... 101 2e-024
gb|CW339096.1|CW339096 104_839_11485091_116_36134_038 Sorgh... 79 4e-024
gb|CW230595.1|CW230595 104_679_11210649_148_37483_039 Sorgh... 57 4e-024
gb|BF656970.1|BF656970 OV2_19_D03.b1_A002 Ovary 2 (OV2) Sor... 100 6e-024
gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sor... 103 1e-023
gb|CW104791.1|CW104791 104_474_11012610_116_34451_079 Sorgh... 112 1e-023
gb|CW042812.1|CW042812 104_276_10507292_116_30487 Sorghum m... 75 2e-023
gb|CW412231.1|CW412231 fsbb001f107m09f0 Sorghum methylation... 112 2e-023
gb|CW177247.1|CW177247 104_590_11158924_116_36597_008 Sorgh... 74 2e-023
gb|BZ369841.1|BZ369841 id13a01.g1 WGS-SbicolorF (DH5a methy... 94 3e-023
gb|CW266910.1|CW266910 104_736_11232691_148_35285_066 Sorgh... 89 3e-023
gb|CW117897.1|CW117897 104_494_11107909_148_34622_061 Sorgh... 111 4e-023
gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sor... 103 1e-022
gb|CW325018.1|CW325018 104_819_11477466_148_35913_067 Sorgh... 78 2e-022
gb|CW469189.1|CW469189 fsbb001f221m13k0 Sorghum methylation... 78 3e-022
gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorgh... 95 3e-022
gb|CW420369.1|CW420369 fsbb001f126k15k0 Sorghum methylation... 108 4e-022
gb|CL182215.1|CL182215 104_393_10897273_148_31921_265 Sorgh... 58 8e-022
gb|CW211209.1|CW211209 104_642_11190386_148_37012_015 Sorgh... 60 1e-021
gb|CW276960.1|CW276960 104_750_11405768_148_35399_018 Sorgh... 106 1e-021
gb|CW379521.1|CW379521 fsbb001f058n08k0 Sorghum methylation... 67 1e-021
gb|CW039719.1|CW039719 104_272_10505656_115_30390 Sorghum m... 105 2e-021
gb|CW084629.1|CW084629 104_427_10945909_116_32511_055 Sorgh... 105 2e-021
gb|CW467940.1|CW467940 fsbb001f219n10k0 Sorghum methylation... 104 4e-021
gb|BE918114.1|BE918114 OV1_2_B04.b1_A002 Ovary 1 (OV1) Sorg... 86 6e-021
>gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146378, DNA
sequence
Length = 728
Score = 365 bits (792), Expect = 1e-099
Identities = 136/202 (67%), Positives = 166/202 (82%)
Frame = +1 / -1
Query: 1084 LRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRR 1263
+ VQGD++ F+NCRF+ +QDTLYVHA RQFFRNC V GT+DFIFGNSAA+FQNCL+ R+
Sbjct: 728 MHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRK 549
Query: 1264 PMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIM 1443
P D+Q N VTA GRTDPNM +G+V+Q CR+VP+Q LFP R ++PSYLGRPWKE++R V+M
Sbjct: 548 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPVRLQVPSYLGRPWKEYARTVVM 369
Query: 1444 ESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVIGRKEAEPFT 1623
ESTI D ++PEG+ W GD LKTLYYAEY N GPGAGTSKRVNWPG+ VIG+ EA FT
Sbjct: 368 ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYRVIGQAEATHFT 189
Query: 1624 AGPFIDGAMWLKYTGAPHILGF 1689
AG FIDG WL+ TG P+++GF
Sbjct: 188 AGVFIDGMTWLQSTGTPNVMGF 123
Score = 278 bits (602), Expect = 2e-073
Identities = 129/201 (64%), Positives = 140/201 (69%)
Frame = -1 / +1
Query: 1691 LKPSMCGAPVYLSHMAPSMNGPAVNGSASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SV 1512
+KP G PV SH+ PSM PAV AS PMT PGQLTLLLVPAPGP L YSA**SV
Sbjct: 121 VKPMTFGVPVLWSHVMPSMKTPAVKCVASACPMTR*PGQLTLLLVPAPGPVLAYSA**SV 300
Query: 1511 LRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPRYEGILKRSGNSFWSGTRRQFWMT 1332
LR +SP +PSGL +S MVLS+ T SF GRPR G R+G S SGT RQ W T
Sbjct: 301 LRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*LGTWSRTGKSACSGTMRQPWST 480
Query: 1331 SPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRACT 1152
P MLGSV PCAVT WLS G R ++RQFWN+AAELPKMKS VP T+QLRKNCR ACT
Sbjct: 481 IPVGMLGSVLPCAVTMLDWLSPGLRTVIRQFWNSAAELPKMKSTVPSTSQLRKNCRFACT 660
Query: 1151 YSVSWNASNRQL*NAARSPCT 1089
YSVSW SNRQL N SPCT
Sbjct: 661 YSVSWYPSNRQLKNTDMSPCT 723
Score = 113 bits (242), Expect(3) = 3e-034
Identities = 59/115 (51%), Positives = 65/115 (56%)
Frame = -3 / +3
Query: 1491 PGHVPLWLDEVGDGALHDDEARELLPGAAQVRGDLEAVREQLLVGHQAAVLDDEPGLHVG 1312
P P DEV DGALH R LLP A+V G LE E+ L+ H AA L+ +P HVG
Sbjct: 321 PLRPPFRPDEVADGALHHHRPRVLLPWPAEVAGHLEPHGEERLLRHDAAALEHDPRGHVG 500
Query: 1311 VGAPXXXXXXXXXXHGPPRDDEAVLEHRRRVAEDEVDGAGDHAVAEELPPRVHVQ 1147
V P G +AVLE RRRVAEDEV GA AVAEELP RVHVQ
Sbjct: 501 VRPPLRRHHVGLAVPGLAHRHQAVLEQRRRVAEDEVHGAQHLAVAEELPVRVHVQ 665
Score = 58.8 bits (122), Expect(3) = 8e-024
Identities = 29/56 (51%), Positives = 31/56 (55%)
Frame = +3 / -3
Query: 1443 GEHHRRLRQARGVHALERRLRPQDALLXXXXXXXXXXXXXXEGQLARLPRHRTEGG 1610
GEHHRR QA V ++ R RPQDALL EGQLA LPRHRT G
Sbjct: 369 GEHHRRPHQAGRVGGVDGRPRPQDALLRRVRQHRPGRRHQQEGQLAGLPRHRTGRG 202
Score = 46.4 bits (95), Expect(3) = 8e-024
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / -3
Query: 1110 VLQLPVRRVPGHAVRARAAAVLP 1178
VLQLPVR VPGHAVRAR AVLP
Sbjct: 702 VLQLPVRGVPGHAVRAREPAVLP 634
Score = 45.5 bits (93), Expect(3) = 8e-024
Identities = 22/48 (45%), Positives = 24/48 (50%)
Frame = +3 / -3
Query: 1233 VPELPXXXXXXXGQPAELGDGARAHRPQHEVRARHPELPPGARPEAVP 1376
VPELP GQP + GDGA PQH R P LP A A+P
Sbjct: 579 VPELPDDGAQARGQPVQHGDGAGEDGPQHAHGDRAPGLPHRAGAGALP 436
Score = 38.6 bits (78), Expect(3) = 3e-034
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 1689 ETKYVRRAGVLEPHGAVDERPGGERLGLLPSDD 1591
E V RAG LEP AVDE GGE GL SDD
Sbjct: 123 EAHDVWRAGALEPRHAVDEDAGGEVRGLGLSDD 221
Score = 33.6 bits (67), Expect(3) = 3e-034
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 1609 PPSVR*RGSRAS*PSCW 1559
P VR*RGS AS*PSCW
Sbjct: 203 PRPVR*RGSPAS*PSCW 253
>gb|CF486088.1|CF486088 POL1_35_D06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 5', mRNA sequence
Length = 576
Score = 328 bits (710), Expect = 2e-088
Identities = 125/189 (66%), Positives = 154/189 (81%)
Frame = +1 / +2
Query: 907 NIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEASGFICKNMGFHNTAGAERHQAVAL 1086
NIFMYGDGP ++ VTG KS G T+ T TFS E +GFICK+MGF NTAG + HQAVA+
Sbjct: 8 NIFMYGDGPTKTVVTGDKSNTGGFATIATPTFSAEGNGFICKSMGFVNTAGPDGHQAVAM 187
Query: 1087 RVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRP 1266
VQGD++ F+NCRF+ +QDTLYVHA RQFFRNC V GT+DFIFGNSAA+FQNCL+ R+P
Sbjct: 188 HVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRKP 367
Query: 1267 MDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIME 1446
D+Q N VTA GRTDPNM +G+V+Q CR+VP+Q LFP R ++PSYLGRPWKE++R V+ME
Sbjct: 368 GDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPVRLQVPSYLGRPWKEYARTVVME 547
Query: 1447 STIADFVKP 1473
STI D ++P
Sbjct: 548 STIGDLIRP 574
Score = 263 bits (568), Expect = 8e-069
Identities = 121/192 (63%), Positives = 132/192 (68%)
Frame = -1 / -1
Query: 1475 SGLTKSAMVLSMMTRRENSFQGRPRYEGILKRSGNSFWSGTRRQFWMTSPDFMLGSVRPC 1296
SGL +S MVLS+ T SF GRPR G R+G S SGT RQ W T P MLGSV PC
Sbjct: 576 SGLMRSPMVLSITTVLAYSFHGRPR*LGTWSRTGKSACSGTMRQPWSTIPVGMLGSVLPC 397
Query: 1295 AVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL 1116
AVT WLS G R ++RQFWN+AAELPKMKS VP T+QLRKNCR ACTYSVSW SNRQL
Sbjct: 396 AVTMLDWLSPGLRTVIRQFWNSAAELPKMKSTVPSTSQLRKNCRFACTYSVSWYPSNRQL 217
Query: 1115 *NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKVAVFMVVMPSAKLLRPVTRLC 936
N SPCT ATAW S PAVL P+ LQMNP S EKV V MV P LL PVT +
Sbjct: 216 KNTDMSPCTCIATAW*PSGPAVLTKPIDLQMNPLPSAEKVGVAMVANPPVLLLSPVTTVF 37
Query: 935 LGPSPYMKMLTL 900
+GPSPYMKML +
Sbjct: 36 VGPSPYMKMLAM 1
Score = 112 bits (240), Expect(2) = 5e-029
Identities = 57/107 (53%), Positives = 63/107 (58%)
Frame = -3 / -3
Query: 1467 DEVGDGALHDDEARELLPGAAQVRGDLEAVREQLLVGHQAAVLDDEPGLHVGVGAPXXXX 1288
DEV DGALH R LLP A+V G LE E+ L+ H AA L+ +P HVGV P
Sbjct: 568 DEVADGALHHHRPRVLLPWPAEVAGHLEPHGEERLLRHDAAALEHDPRGHVGVRPPLRRH 389
Query: 1287 XXXXXXHGPPRDDEAVLEHRRRVAEDEVDGAGDHAVAEELPPRVHVQ 1147
G +AVLE RRRVAEDEV GA AVAEELP RVHVQ
Sbjct: 388 HVGLAVPGLAHRHQAVLEQRRRVAEDEVHGAQHLAVAEELPVRVHVQ 248
Score = 37.7 bits (76), Expect(2) = 5e-029
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 1092 HPERHRLVPLRAGRVVEPHVLADEP 1018
H RHRLV +R RV E H LADEP
Sbjct: 193 HVHRHRLVTIRPRRVDETHRLADEP 119
>gb|CL182214.1|CL182214 104_393_10897273_116_31922_265 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897273, DNA
sequence
Length = 729
Score = 274 bits (592), Expect = 4e-072
Identities = 118/235 (50%), Positives = 147/235 (62%)
Frame = +1 / -2
Query: 655 RRRLLSSEQDEKGWPVWMRSPERKLLASGNQPKPNAIVAKDGSGQFKSIQQAVDAVPKGH 834
RR L W + RK+ KP+ VAKDGSG F++I A+ VP
Sbjct: 725 RRLLADHAGGVPSWMPDAKRRLRKVSPGDKGFKPDVTVAKDGSGDFRTINAALAKVPVKS 546
Query: 835 QGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEA 1014
YV+YVKAG Y E V VP++ N+ M GDG ++ +TG KSF ITT TAT
Sbjct: 545 AATYVMYVKAGTYREYVSVPRNVTNLVMVGDGATKTVITGDKSFMMNITTKDTATMEALG 366
Query: 1015 SGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVS 1194
+GF+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD +QDTLY H RQ++R CV++
Sbjct: 365 NGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGYQDTLYTHTSRQYYRECVIT 186
Query: 1195 GTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVP 1359
GTIDFIFGN+ VFQNCLI R+ MDNQQN VTA GR + G VI NC + P
Sbjct: 185 GTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEP 21
Score = 222 bits (480), Expect = 1e-056
Identities = 112/214 (52%), Positives = 125/214 (58%)
Frame = -1 / +1
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQL 1179
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKSMVP T
Sbjct: 22 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 201
Query: 1178 RKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEK 999
R CR C YSVSW SNR *NA S CTRSATAW APAV P+ NP S
Sbjct: 202 R*YCRLVCVYSVSWYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASI 381
Query: 998 VAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYLP*WPLGT 819
VAV +VVM KLL PV + + PSP + GT T S PAFT MTY+ GT
Sbjct: 382 VAVSLVVMFIMKLLSPVITVLVAPSPTITRFVTFRGTDTYSLYVPAFTYMTYVAALFTGT 561
Query: 818 ASTACWMLLNCPLPSLATIAFGLGWLPDASSFLS 717
++A M+L PLPSLAT+ GL L +F S
Sbjct: 562 LASAALMVLKSPLPSLATVTSGLKPLSPGETFRS 663
>gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 717
Score = 153 bits (329), Expect(3) = 4e-071
Identities = 58/107 (54%), Positives = 76/107 (71%)
Frame = +1 / +3
Query: 1051 TAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAA 1230
TAG +HQAVALR DL+ FY C F+A+QDTLY H+ RQF+R C V GT+D++FGN+A
Sbjct: 9 TAGPAKHQAVALRSGADLSTFYQCSFEAYQDTLYTHSLRQFYRGCDVYGTVDYVFGNAAV 188
Query: 1231 VFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
VFQ+C + +R PM Q N+VTA GRTDPN +G +Q C + +L
Sbjct: 189 VFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTVAAAPEL 329
Score = 127 bits (272), Expect(3) = 4e-071
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +1 / +3
Query: 1384 FKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTS 1563
F + +YLGRPWK +SR VIM+S + V P G+MPW+GD+AL TL+YAEYNN GPGA TS
Sbjct: 345 FAVATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTS 524
Query: 1564 KRVNWPGFHVI 1596
+RV WPGFHV+
Sbjct: 525 RRVAWPGFHVL 557
Score = 110 bits (234), Expect(2) = 6e-043
Identities = 53/99 (53%), Positives = 56/99 (56%)
Frame = -1 / -3
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q W P F GSVRPCAVT +G Q WNT A LP S VP T+Q R NC
Sbjct: 304 QPWSVVPVFWFGSVRPCAVTVLLCPCIGSLE*RLQSWNTTAALPNT*STVP*TSQPR*NC 125
Query: 1166 RRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAV 1050
RR C YSVSW AS *N RS RSATAWC + PAV
Sbjct: 124 RRECVYSVSWYASKLHW*NVDRSAPERSATAWCFAGPAV 8
Score = 87.2 bits (184), Expect(2) = 6e-043
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = -1 / -3
Query: 1592 TWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQ 1413
TWKPG TLLLV APGP LLYSA* SVL A SP G++P+G T ++ M+T RE SF
Sbjct: 553 TWKPGHATLLLVSAPGPELLYSA*KSVLSA*SPSHGIHPAGSTSASTSDCMITVRE*SFH 374
Query: 1412 GRPR 1401
GRPR
Sbjct: 373 GRPR 362
Score = 29.5 bits (58), Expect(3) = 4e-071
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1 / +3
Query: 1597 GRKEAEPFTAGPFIDGAMWLKYTGAPHILG 1686
G +A FT G + G WL TG P G
Sbjct: 561 GTADAANFTVGNMVLGDFWLPQTGVPFTSG 650
>gb|CW057246.1|CW057246 104_299_10518117_115_30171 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518117, DNA
sequence
Length = 581
Score = 264 bits (571), Expect = 3e-069
Identities = 104/172 (60%), Positives = 132/172 (76%)
Frame = +1 / -3
Query: 694 WPVWMRSPERKLLASGNQPKPNAIVAKDGSGQFKSIQQAVDAVPKGHQGRYVIYVKAGLY 873
+P WM + +R+LL + KPN +VA+DGSG FK+I +A+ AVPK +GR+VIYVK+G+Y
Sbjct: 516 FPKWMSATQRRLLQLPSLQKPNKVVAQDGSGDFKTISEAIAAVPKTFEGRFVIYVKSGVY 337
Query: 874 DEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEASGFICKNMGFHNT 1053
E V VPK+ NIFMYGDGP ++ VTG KS G T+ T TFS E +GFICK+MGF NT
Sbjct: 336 KEYVTVPKNMANIFMYGDGPTKTVVTGDKSNTGGFATIATPTFSAEGNGFICKSMGFVNT 157
Query: 1054 AGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDF 1209
AG + HQAVA+ VQGD++ F+NCRF+ +QDTLYVHA RQFFRNC V GT+DF
Sbjct: 156 AGPDGHQAVAMHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDF 1
Score = 196 bits (423), Expect = 8e-049
Identities = 98/172 (56%), Positives = 107/172 (62%)
Frame = -1 / +2
Query: 1208 KSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFL 1029
KS VP T+QLRKNCR ACTYSVSW SNRQL N SPCT ATAW S PAVL P+ L
Sbjct: 2 KSTVPSTSQLRKNCRFACTYSVSWYPSNRQLKNTDMSPCTCIATAW*PSGPAVLTKPIDL 181
Query: 1028 QMNPDASTEKVAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*M 849
QMNP S EKV V MV P LL PVT + +GPSPYMKML + LGT+T S P FT*M
Sbjct: 182 QMNPLPSAEKVGVAMVANPPVLLLSPVTTVFVGPSPYMKMLAMFLGTVTYSLYTPDFT*M 361
Query: 848 TYLP*WPLGTASTACWMLLNCPLPSLATIAFGLGWLPDASSFLSGDRIHTGQ 693
T P LGTA+ A M+L PLPS AT G L S IH G+
Sbjct: 362 TKRPSKVLGTAAMASLMVLKSPLPSWATTLLGFCRLGSCRSLRWVADIHLGK 517
Score = 80.3 bits (169), Expect(2) = 7e-021
Identities = 37/76 (48%), Positives = 46/76 (60%)
Frame = +3 / -2
Query: 693 LARVDAVAGEEAAGIGQPAQAERDRGQGRQRAVQEHPAGRGRRAQRPSGEVRHLREGRPL 872
L +VD EA QPA+A++ G GRQR +Q+H G RRAQ G +RHLRE R +
Sbjct: 517 LPQVDVGHPAEAPAAAQPAEAQQGGGPGRQRRLQDHQRGHRRRAQDLRGPLRHLREVRRV 338
Query: 873 RRDRHGPQGQGQHLHV 920
+ RH Q GQHLHV
Sbjct: 337 QGVRHRAQEHGQHLHV 290
Score = 46.4 bits (95), Expect(2) = 7e-021
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / -2
Query: 1110 VLQLPVRRVPGHAVRARAAAVLP 1178
VLQLPVR VPGHAVRAR AVLP
Sbjct: 100 VLQLPVRGVPGHAVRAREPAVLP 32
>gb|CW192233.1|CW192233 104_614_11178915_116_36943_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 256 bits (553), Expect = 1e-066
Identities = 105/193 (54%), Positives = 131/193 (67%)
Frame = +1 / +1
Query: 781 SGQFKSIQQAVDAVPKGHQGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRK 960
SG F++I A+ VP YV+YVKAG Y E V VP++ N+ M GDG ++ +TG K
Sbjct: 61 SGDFRTINAALAKVPVKSAATYVMYVKAGTYREYVSVPRNVTNLVMVGDGATKTVITGDK 240
Query: 961 SFADGITTMKTATFSVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQ 1140
SF ITT TAT +GF+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD +Q
Sbjct: 241 SFMMNITTKDTATMEALGNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGYQ 420
Query: 1141 DTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNM 1320
DTLY H RQ++R CV++GTIDFIFGN+ VFQNCLI R+ MDNQQN VTA GR +
Sbjct: 421 DTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRS 600
Query: 1321 KSGLVIQNCRLVP 1359
G VI NC + P
Sbjct: 601 AGGTVIHNCTIEP 639
Score = 204 bits (440), Expect = 4e-051
Identities = 102/193 (52%), Positives = 113/193 (58%)
Frame = -1 / -3
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQL 1179
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKSMVP T
Sbjct: 638 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 459
Query: 1178 RKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEK 999
R CR C YSVSW SNR *NA S CTRSATAW APAV P+ NP S
Sbjct: 458 R*YCRLVCVYSVSWYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASI 279
Query: 998 VAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYLP*WPLGT 819
VAV +VVM KLL PV + + PSP + GT T S PAFT MTY+ GT
Sbjct: 278 VAVSLVVMFIMKLLSPVITVLVAPSPTITRFVTFRGTDTYSLYVPAFTYMTYVAALFTGT 99
Query: 818 ASTACWMLLNCPL 780
++A M+L PL
Sbjct: 98 LASAALMVLKSPL 60
>gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f071b07, DNA
sequence
Length = 617
Score = 253 bits (547), Expect = 7e-066
Identities = 101/192 (52%), Positives = 131/192 (68%)
Frame = +1 / +3
Query: 997 TFSVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFF 1176
T +V +GF+ +++ N AG +HQAVALRV DLAAFY C F +QDTLY H+ RQF+
Sbjct: 39 TAAVVGTGFLARDLTVENAAGPSKHQAVALRVNADLAAFYRCSFAGYQDTLYAHSLRQFY 218
Query: 1177 RNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLV 1356
R+C V GT+DF+FG++AAV Q C + RRP Q+N VTA GR DPN +G+V+Q ++
Sbjct: 219 RDCDVYGTVDFVFGDAAAVLQGCSLYARRPGPGQKNVVTAQGREDPNQNTGIVVQGGKVA 398
Query: 1357 PDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYN 1536
L P + SYLGRPWK +SR V +++ + V P G++ WNG FAL TLYYAEY
Sbjct: 399 AAADLVPVLGNVSSYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYM 578
Query: 1537 NRGPGAGTSKRV 1572
NRGPGA TS RV
Sbjct: 579 NRGPGADTSARV 614
Score = 102 bits (217), Expect(2) = 1e-034
Identities = 56/113 (49%), Positives = 60/113 (53%)
Frame = -1 / -2
Query: 1334 TSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRAC 1155
T P F LGS RPCAVT F GRR Q +TAA PK KS VP T+Q R N RR C
Sbjct: 376 TMPVFWLGSSRPCAVTTFFCPGPGRRA*RLQPCSTAAASPKTKSTVP*TSQSR*NWRREC 197
Query: 1154 TYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKV 996
VSW + Q * AARS TRSATAWC PA NP +T V
Sbjct: 196 A*RVSW*PAKLQR*KAARSAFTRSATAWCLLGPAAFSTVRSRARNPVPTTAAV 38
Score = 67.0 bits (140), Expect(2) = 1e-034
Identities = 33/66 (50%), Positives = 41/66 (62%)
Frame = -1 / -2
Query: 1571 TLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPRYEG 1392
TL V APGPR +YSA* SV AK PF +P G T +++++ T RE SF G PR E
Sbjct: 613 TLAEVSAPGPRFMYSA*YSVSSAKVPFHSSHPRGWTSASILVCTNTVRE*SFHGLPR*EE 434
Query: 1391 ILKRSG 1374
L R+G
Sbjct: 433 TLPRTG 416
>gb|CW321706.1|CW321706 104_815_11475696_148_35943_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475696, DNA
sequence
Length = 670
Score = 218 bits (470), Expect(4) = 1e-065
Identities = 82/94 (87%), Positives = 89/94 (94%)
Frame = +1 / +1
Query: 1438 IMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVIGRKEAEP 1617
IMESTIADF+KPEGYMPWNGDF +KTL+YAEYNNRGPGAGTSKRVNWPGFHVI RK+AE
Sbjct: 1 IMESTIADFIKPEGYMPWNGDFGIKTLFYAEYNNRGPGAGTSKRVNWPGFHVITRKDAEQ 180
Query: 1618 FTAGPFIDGAMWLKYTGAPHILGFKF*RPHGMAY 1719
FTAGPFIDGA+WLK+TG PHILGFK *RPHGMA+
Sbjct: 181 FTAGPFIDGALWLKFTGTPHILGFKS*RPHGMAW 282
Score = 183 bits (394), Expect(5) = 3e-057
Identities = 79/93 (84%), Positives = 81/93 (87%)
Frame = -1 / -3
Query: 1718 YAMPCGL*NLKPSMCGAPVYLSHMAPSMNGPAVNGSASFRPMTWKPGQLTLLLVPAPGPR 1539
+AMPCGL*+L P MCG PV LSH APSMNGPAVN SASFR MTW PGQLTLLLVPAPGPR
Sbjct: 281 HAMPCGL*DLNPRMCGVPVNLSHSAPSMNGPAVNCSASFRVMTWNPGQLTLLLVPAPGPR 102
Query: 1538 LLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSM 1440
LLYSA* SVL KSPFQGMYPSGL KSAMVLSM
Sbjct: 101 LLYSA*KSVLMPKSPFQGMYPSGLMKSAMVLSM 3
Score = 81.3 bits (171), Expect(5) = 7e-030
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = -3 / -2
Query: 1716 CHAMRPLELETKYVRRAGVLEPHGAVDERPGGERLGLLPSDDVE 1585
CHAMRPL LE + VRRAG LEP AVDERPGGE LG+LP DDVE
Sbjct: 279 CHAMRPLGLEPEDVRRAGELEPQRAVDERPGGELLGVLPGDDVE 148
Score = 78.5 bits (165), Expect(4) = 5e-025
Identities = 35/56 (62%), Positives = 36/56 (64%)
Frame = +3 / +3
Query: 1440 HGEHHRRLRQARGVHALERRLRPQDALLXXXXXXXXXXXXXXEGQLARLPRHRTEG 1607
HGEHHRRL QA GVHALERRLR QDALL EGQLA +PRH EG
Sbjct: 3 HGEHHRRLHQAGGVHALERRLRHQDALLRRVQQPRARRRHQQEGQLAWVPRHHPEG 170
Score = 45.1 bits (92), Expect(5) = 7e-030
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3 / -2
Query: 1491 PGHVPLWLDEVGDGALHD 1438
PGHVPL LDEVGDGALHD
Sbjct: 54 PGHVPLRLDEVGDGALHD 1
Score = 44.6 bits (91), Expect(4) = 5e-025
Identities = 20/43 (46%), Positives = 22/43 (51%)
Frame = +2 / +2
Query: 1649 CGSSTPARRTYLVSSSKGRMAWXXXXXXXXXXXXARARAHTCL 1777
CGSS+PARRT SS KGRMAW AR C+
Sbjct: 212 CGSSSPARRTSSGSSPKGRMAWHGMAWSDSEVAVARTYILVCM 340
Score = 40.5 bits (82), Expect(5) = 3e-057
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 1950 RTHTMH*LSNVATNHCPKDFS 1888
RTHT L+NVAT HCPKDFS
Sbjct: 548 RTHTHTALTNVATYHCPKDFS 486
Score = 35.0 bits (70), Expect(4) = 1e-065
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 1889 EKSFGQ*FVATLLN*CMVCV 1948
EKSFGQ*+VATL+N VCV
Sbjct: 487 EKSFGQ*YVATLVNAVCVCV 546
Score = 31.3 bits (62), Expect(4) = 5e-025
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 1891 KVLWTMICCDIA* 1929
KV WTMICCD+ *
Sbjct: 489 KVFWTMICCDVG* 527
Score = 29.5 bits (58), Expect(5) = 7e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / -1
Query: 1606 PSVR*RGSRAS*PSCW 1559
PS *RG++AS*PSCW
Sbjct: 169 PSG**RGTQAS*PSCW 122
Score = 29.5 bits (58), Expect(4) = 1e-065
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 1842 YLYHLHSFGCFSW*NS 1889
+ + HSFGC SW*NS
Sbjct: 430 FSFLFHSFGCCSW*NS 477
Score = 27.6 bits (54), Expect(4) = 1e-065
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 1759 ARTHMFVCMYND 1794
ART++ VCMYND
Sbjct: 314 ARTYILVCMYND 349
Score = 27.2 bits (53), Expect(5) = 3e-057
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 1888 EFHQEKQPKECK 1853
EFHQE+QPKE K
Sbjct: 476 EFHQEQQPKE*K 441
Score = 25.8 bits (50), Expect(5) = 7e-030
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1 / -2
Query: 1796 QSLYIHTNMCVRARERVCHLTIYDVMYAMPCGL 1698
+SLYIHT M VRA L P GL
Sbjct: 351 RSLYIHTKMYVRATATSLSLHAMPCHAMRPLGL 253
Score = 25.4 bits (49), Expect(4) = 5e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 1926 LINAWCACVLSK 1961
L+NA C CVLSK
Sbjct: 520 LVNAVCVCVLSK 555
Score = 24.9 bits (48), Expect(5) = 3e-057
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 1851 GKGTNVSPPVLRPL 1810
G NVSPPVLR L
Sbjct: 421 GTNVNVSPPVLRHL 380
Score = 24.0 bits (46), Expect(5) = 3e-057
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -3 / -1
Query: 1812 LCLQVSVIVHTHKHV 1768
L ++S+IVHTH++V
Sbjct: 367 LLARLSIIVHTHQNV 323
Score = 24.0 bits (46), Expect(5) = 7e-030
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 1887 SFTRRNSQRNANGK 1846
+FT+ N+QRN GK
Sbjct: 475 NFTKSNNQRNEKGK 434
>gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 3', mRNA sequence
Length = 713
Score = 251 bits (543), Expect = 2e-065
Identities = 94/142 (66%), Positives = 114/142 (80%)
Frame = +1 / +2
Query: 1264 PMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIM 1443
P D+Q N VTA GRTDPNM +G+V+Q CR+VP+Q LFP R ++PSYLGRPWKE++R V+M
Sbjct: 20 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPVRLQVPSYLGRPWKEYARTVVM 199
Query: 1444 ESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVIGRKEAEPFT 1623
ESTI D ++PEG+ W GD LKTLYYAEY N GPGAGTSKRVNWPG+ VIG+ EA FT
Sbjct: 200 ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYRVIGQAEATHFT 379
Query: 1624 AGPFIDGAMWLKYTGAPHILGF 1689
AG FIDG WL+ TG P+++GF
Sbjct: 380 AGVFIDGMTWLQSTGTPNVMGF 445
Score = 174 bits (375), Expect = 4e-042
Identities = 86/143 (60%), Positives = 93/143 (65%)
Frame = -1 / -3
Query: 1691 LKPSMCGAPVYLSHMAPSMNGPAVNGSASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SV 1512
+KP G PV SH+ PSM PAV AS PMT PGQLTLLLVPAPGP L YSA**SV
Sbjct: 447 VKPMTFGVPVLWSHVMPSMKTPAVKCVASACPMTR*PGQLTLLLVPAPGPVLAYSA**SV 268
Query: 1511 LRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPRYEGILKRSGNSFWSGTRRQFWMT 1332
LR +SP +PSGL +S MVLS+ T SF GRPR G R+G S SGT RQ W T
Sbjct: 267 LRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*LGTWSRTGKSACSGTMRQPWST 88
Query: 1331 SPDFMLGSVRPCAVTEFCWLSMG 1263
P MLGSV PCAVT WLS G
Sbjct: 87 IPVGMLGSVLPCAVTMLDWLSPG 19
Score = 63.4 bits (132), Expect(4) = 1e-023
Identities = 31/64 (48%), Positives = 36/64 (56%)
Frame = -3 / -2
Query: 1491 PGHVPLWLDEVGDGALHDDEARELLPGAAQVRGDLEAVREQLLVGHQAAVLDDEPGLHVG 1312
P P DEV DGALH R LLP A+V G LE E+ L+ H AA L+ +P HVG
Sbjct: 247 PLRPPFRPDEVADGALHHHRPRVLLPWPAEVAGHLEPHGEERLLRHDAAALEHDPRGHVG 68
Query: 1311 VGAP 1300
V P
Sbjct: 67 VRPP 56
Score = 38.6 bits (78), Expect(4) = 1e-023
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = -3 / -2
Query: 1689 ETKYVRRAGVLEPHGAVDERPGGERLGLLPSDD 1591
E V RAG LEP AVDE GGE GL SDD
Sbjct: 445 EAHDVWRAGALEPRHAVDEDAGGEVRGLGLSDD 347
Score = 33.6 bits (67), Expect(4) = 1e-023
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 1609 PPSVR*RGSRAS*PSCW 1559
P VR*RGS AS*PSCW
Sbjct: 365 PRPVR*RGSPAS*PSCW 315
Score = 31.3 bits (62), Expect(4) = 1e-023
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2 / -1
Query: 1318 CWGRCARAPSPSSAGCP 1268
CWG + APSP GCP
Sbjct: 74 CWGPSSPAPSPCWTGCP 24
>gb|CL150595.1|CL150595 104_332_10778646_114_31357_198 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778646, DNA
sequence
Length = 794
Score = 249 bits (539), Expect = 8e-065
Identities = 107/210 (50%), Positives = 134/210 (63%)
Frame = +1 / -1
Query: 655 RRRLLSSEQDEKGWPVWMRSPERKLLASGNQPKPNAIVAKDGSGQFKSIQQAVDAVPKGH 834
RR L W + RK+ KP+ VAKDGSG F++I A+ VP
Sbjct: 635 RRLLADHAGGVPSWMPDAKRRLRKVSPGDKGFKPDVTVAKDGSGDFRTINAALAKVPVKS 456
Query: 835 QGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEA 1014
YV+YVKAG Y E V VP++ N+ M GDG ++ +TG KSF ITT TAT
Sbjct: 455 AATYVMYVKAGTYREYVSVPRNVTNLVMVGDGATKTVITGDKSFMMNITTKDTATMEALG 276
Query: 1015 SGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVS 1194
+GF+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD +QDTLY H RQ++R CV++
Sbjct: 275 NGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGYQDTLYTHTSRQYYRECVIT 96
Query: 1195 GTIDFIFGNSAAVFQNCLIITRRPMDNQQN 1284
GTIDFIFGN+ VFQNCLI R+ MDNQQN
Sbjct: 95 GTIDFIFGNAQVVFQNCLIQVRKCMDNQQN 6
Score = 193 bits (415), Expect = 1e-047
Identities = 98/189 (51%), Positives = 109/189 (57%)
Frame = -1 / +1
Query: 1283 FCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAA 1104
FCWLSM R MRQFWNT LPKMKSMVP T R CR C YSVSW SNR *NA
Sbjct: 7 FCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHSR*YCRLVCVYSVSWYPSNRHS*NAD 186
Query: 1103 RSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKVAVFMVVMPSAKLLRPVTRLCLGPS 924
S CTRSATAW APAV P+ NP S VAV +VVM KLL PV + + PS
Sbjct: 187 MSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASIVAVSLVVMFIMKLLSPVITVLVAPS 366
Query: 923 PYMKMLTLSLGTMTISS*RPAFT*MTYLP*WPLGTASTACWMLLNCPLPSLATIAFGLGW 744
P + GT T S PAFT MTY+ GT ++A M+L PLPSLAT+ GL
Sbjct: 367 PTITRFVTFRGTDTYSLYVPAFTYMTYVAALFTGTLASAALMVLKSPLPSLATVTSGLKP 546
Query: 743 LPDASSFLS 717
L +F S
Sbjct: 547 LSPGETFRS 573
>gb|CW340403.1|CW340403 104_841_11485781_148_36147_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485781, DNA
sequence
Length = 675
Score = 159 bits (342), Expect(2) = 2e-061
Identities = 63/132 (47%), Positives = 87/132 (65%)
Frame = +1 / +1
Query: 976 ITTMKTATFSVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYV 1155
I M +V+ F+ +G NTAG E+ QA+ALRV+GD A F+NCR + QDTL+
Sbjct: 7 IYNMPALHAAVDGDSFMAMKLGIKNTAGVEKQQALALRVKGDKAIFFNCRIEGNQDTLFA 186
Query: 1156 HARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLV 1335
A RQF+R+CV+SGT+DFI G++AAVFQ CL++ R+P Q VTA R D +G V
Sbjct: 187 QAYRQFYRSCVISGTVDFIMGDAAAVFQRCLLVVRQPRQGQPAVVTAQSRRDHQQTTGFV 366
Query: 1336 IQNCRLVPDQKL 1371
I C++V D++L
Sbjct: 367 IHRCQIVADEEL 402
Score = 120 bits (257), Expect(2) = 2e-033
Identities = 62/120 (51%), Positives = 66/120 (55%)
Frame = -1 / -2
Query: 1340 WMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRR 1161
WMT P S R CAVT G R RQ WNTAA P MKS VPE TQLR NCR
Sbjct: 371 WMTKPVVCWWSRRDCAVTTAGCPCRGCRTTSRQRWNTAAASPMMKSTVPEMTQLR*NCRY 192
Query: 1160 ACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKVAVFMV 981
AC SVSW S RQL A SP TRSA+A C S PAV P F+ M ST + M+
Sbjct: 191 ACAKSVSWLPSIRQLKKMALSPFTRSASACCFSTPAVFLMPSFIAMKLSPSTAACSAGML 12
Score = 100 bits (212), Expect(2) = 2e-061
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +1 / +1
Query: 1390 IPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKR 1569
+ +YLGRPWKE++R V+MES I FV +GYMPW G L T ++ E+ N G GA + R
Sbjct: 442 VTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLXTAFFGEFRNGGDGANATGR 621
Query: 1570 VNWPGFHVIGRKEAEPFT 1623
GFHV+G+ +A FT
Sbjct: 622 KEMKGFHVMGKGQALRFT 675
Score = 44.6 bits (91), Expect(2) = 2e-033
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -1 / -2
Query: 1553 APGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPRY 1398
AP P L S +V R+ P GMYP T M+ S+ T SF GRPRY
Sbjct: 605 APSPPFLNSPKKAVXRSSLPSHGMYPWPCTNPPMMDSITTVLAYSFHGRPRY 450
>gb|CW340402.1|CW340402 104_841_11485781_116_36146_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485781, DNA
sequence
Length = 672
Score = 130 bits (279), Expect(2) = 9e-060
Identities = 52/103 (50%), Positives = 71/103 (68%)
Frame = +1 / -2
Query: 1063 ERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQN 1242
E+ QA+ALRV+GD A F+NCR + Q L+ A RQF+R+CV+SGT+DFI G++AAVFQ
Sbjct: 671 EKQQALALRVKGDKAIFFNCRIEGNQAGLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQR 492
Query: 1243 CLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
CL+ R+P Q VTA R D +G VI C++V D++L
Sbjct: 491 CLLRVRQPRQGQPAVVTAQSRRDHQQTTGFVIHRCQIVADEEL 363
Score = 122 bits (262), Expect(2) = 9e-060
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / -2
Query: 1390 IPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKR 1569
+ +YLGRPWKE++R V+MES I FV +GYMPW G L T ++ E+ N G GA + R
Sbjct: 323 VTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLGTAFFGEFRNGGDGANATGR 144
Query: 1570 VNWPGFHVIGRKEAEPFTAGPFIDGAMWLKYTGAPHILG 1686
GFHV+G+ +A FT G F+ GA W+ TG P LG
Sbjct: 143 KEMKGFHVMGKDKALRFTVGHFLHGADWIPETGTPVSLG 27
Score = 100 bits (213), Expect(3) = 6e-033
Identities = 51/93 (54%), Positives = 53/93 (56%)
Frame = -1 / +1
Query: 1340 WMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRR 1161
WMT P S R CAVT G R RQ WNTAA P MKS VPE TQLR NCR
Sbjct: 394 WMTKPVVCWWSRRDCAVTTAGCPCRGCRTRSRQRWNTAAASPMMKSTVPEMTQLR*NCRY 573
Query: 1160 ACTYSVSWNASNRQL*NAARSPCTRSATAWCRS 1062
AC S +W S RQL A SP TRSA+A C S
Sbjct: 574 ACAKSPAWLPSIRQLKKMALSPFTRSASACCFS 672
Score = 43.7 bits (89), Expect(3) = 6e-033
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -1 / +1
Query: 1553 APGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPRY 1398
AP P L S +V R+ P GMYP T M+ S+ T SF GRPRY
Sbjct: 160 APSPPFLNSPKKAVPRSSLPSHGMYPWPCTNPPMMDSITTVLAYSFHGRPRY 315
Score = 37.7 bits (76), Expect(3) = 6e-033
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1 / +1
Query: 1688 KPSMCGAPVYLSHMAPSMNGPAVNGSASFRPMTWKP 1581
KP + G PV AP P VN SA P+TW P
Sbjct: 25 KPKLTGVPVSGIQSAPCRKWPTVNRSALSLPITWNP 132
>gb|CW089034.1|CW089034 104_434_10948469_114_32601_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948469, DNA
sequence
Length = 620
Score = 130 bits (279), Expect(2) = 4e-059
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +1 / +2
Query: 1084 LRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRR 1263
LRV+GD A F+NCR + QDTL+ A RQF+R+CV+SGT+DFI G++AAVFQ CL++ R+
Sbjct: 2 LRVKGDKAIFFNCRIEGNQDTLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQRCLLVVRQ 181
Query: 1264 PMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
P Q VTA R D +G VI C++V D++L
Sbjct: 182 PRQGQPAVVTAQSRRDHQQTTGFVIHRCQIVADEEL 289
Score = 120 bits (257), Expect(2) = 4e-059
Identities = 46/95 (48%), Positives = 61/95 (64%)
Frame = +1 / +2
Query: 1390 IPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKR 1569
+ +YLGRPWKE++R V+MES I FV +GYMPW G L T ++ E+ N G GA + R
Sbjct: 329 VTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLGTAFFGEFRNGGDGANATGR 508
Query: 1570 VNWPGFHVIGRKEAEPFTAGPFIDGAMWLKYTGAP 1674
GFHV+G+ +A FT G F+ GA W+ TG P
Sbjct: 509 KEMKGFHVMGKDKALRFTVGHFLHGADWIPETGTP 613
Score = 96.8 bits (205), Expect(3) = 3e-030
Identities = 49/86 (56%), Positives = 49/86 (56%)
Frame = -1 / -3
Query: 1340 WMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRR 1161
WMT P S R CAVT G R RQ WNTAA P MKS VPE TQLR NCR
Sbjct: 258 WMTKPVVCWWSRRDCAVTTAGCPCRGCRTTSRQRWNTAAASPMMKSTVPEMTQLR*NCRY 79
Query: 1160 ACTYSVSWNASNRQL*NAARSPCTRS 1083
AC SVSW S RQL A SP TRS
Sbjct: 78 ACAKSVSWLPSIRQLKKMALSPFTRS 1
Score = 43.7 bits (89), Expect(3) = 3e-030
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -1 / -3
Query: 1553 APGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPRY 1398
AP P L S +V R+ P GMYP T M+ S+ T SF GRPRY
Sbjct: 492 APSPPFLNSPKKAVPRSSLPSHGMYPWPCTNPPMMDSITTVLAYSFHGRPRY 337
Score = 32.2 bits (64), Expect(3) = 3e-030
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1 / -3
Query: 1679 MCGAPVYLSHMAPSMNGPAVNGSASFRPMTWKP 1581
+ G PV AP P VN SA P+TW P
Sbjct: 618 LTGVPVSGIQSAPCRKWPTVNRSALSLPITWNP 520
>gb|CW369334.1|CW369334 fsbb001f043l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f043l06, DNA
sequence
Length = 712
Score = 171 bits (367), Expect(2) = 2e-058
Identities = 65/123 (52%), Positives = 86/123 (69%)
Frame = +1 / +1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRN 1182
+V +GF+ NM F NTAG +HQAVALR DL+ FY C F+A+QDTLY H+ RQF+R
Sbjct: 184 AVVGTGFVAVNMTFRNTAGPAKHQAVALRSGADLSTFYQCSFEAYQDTLYTHSLRQFYRG 363
Query: 1183 CVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPD 1362
C V GT+D++FGN+A VFQ+C + +R PM Q N+VTA GRTDPN +G +Q C +
Sbjct: 364 CDVYGTVDYVFGNAAVVFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTVAAA 543
Query: 1363 QKL 1371
+L
Sbjct: 544 PEL 552
Score = 121 bits (258), Expect(2) = 4e-033
Identities = 59/114 (51%), Positives = 63/114 (55%)
Frame = -1 / -3
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q W P F GSVRPCAVT +G Q WNT A LP S VP T+Q R NC
Sbjct: 527 QPWSVVPVFWFGSVRPCAVTVLLCPCIGSLE*RLQSWNTTAALPNT*STVP*TSQPR*NC 348
Query: 1166 RRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDAST 1005
RR C YSVSW AS *N RS RSATAWC + PAV N MF NP +T
Sbjct: 347 RRECVYSVSWYASKLHW*NVDRSAPERSATAWCFAGPAVFRNVMFTATNPVPTT 186
Score = 78.5 bits (165), Expect(2) = 2e-058
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +1 / +1
Query: 1384 FKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYA 1527
F + +YLGRPWK +SR VIM+S + V P G+MPW+GD+AL TL+YA
Sbjct: 568 FAVATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYA 711
Score = 43.2 bits (88), Expect(2) = 4e-033
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -1 / -3
Query: 1526 A**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRPR 1401
A* SVL A SP G++P+G T ++ M+T RE SF GRPR
Sbjct: 710 A*KSVLSA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR 585
>gb|CW443774.1|CW443774 fsbb001f164a20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f164a20, DNA
sequence
Length = 456
Score = 222 bits (479), Expect = 2e-056
Identities = 89/150 (59%), Positives = 110/150 (73%)
Frame = +1 / +2
Query: 844 YVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEASGF 1023
YV+YVKAG Y E V VP++ N+ M GDG ++ +TG KSF ITT TAT +GF
Sbjct: 5 YVMYVKAGTYREYVSVPRNVTNLVMVGDGATKTVITGDKSFMMNITTKDTATMEALGNGF 184
Query: 1024 ICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTI 1203
+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD +QDTLY H RQ++R CV++GTI
Sbjct: 185 LMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGYQDTLYTHTSRQYYRECVITGTI 364
Query: 1204 DFIFGNSAAVFQNCLIITRRPMDNQQNSVT 1293
DFIFGN+ VFQNCLI R+ MDNQQN VT
Sbjct: 365 DFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 454
Score = 169 bits (363), Expect = 2e-040
Identities = 84/151 (55%), Positives = 89/151 (58%)
Frame = -1 / -1
Query: 1295 AVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL 1116
AVT FCWLSM R MRQFWNT LPKMKSMVP T R CR C YSVSW SNR
Sbjct: 456 AVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHSR*YCRLVCVYSVSWYPSNRHS 277
Query: 1115 *NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKVAVFMVVMPSAKLLRPVTRLC 936
*NA S CTRSATAW APAV P+ NP S VAV +VVM KLL PV +
Sbjct: 276 *NADMSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASIVAVSLVVMFIMKLLSPVITVL 97
Query: 935 LGPSPYMKMLTLSLGTMTISS*RPAFT*MTY 843
+ PSP + GT T S PAFT MTY
Sbjct: 96 VAPSPTITRFVTFRGTDTYSLYVPAFTYMTY 4
>gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 626
Score = 207 bits (446), Expect(2) = 2e-056
Identities = 78/154 (50%), Positives = 102/154 (66%)
Frame = +1 / -2
Query: 1135 FQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDP 1314
+QDTLYVH+ RQFFR C + GTIDF+ GN+A V Q C + R+P+ NQ N TA GR DP
Sbjct: 622 YQDTLYVHSLRQFFRECDMYGTIDFVSGNAAVVLQGCNLYARKPLPNQSNIFTAQGREDP 443
Query: 1315 NMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWN 1494
N +G+ I C++ L +YLGRPWK++SR V ++S + + P G++ W+
Sbjct: 442 NQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWD 263
Query: 1495 GDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVI 1596
G+FAL TLYY EY N GPGAGTS RV W G+ VI
Sbjct: 262 GNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVI 161
Score = 94.1 bits (199), Expect(3) = 1e-029
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -1 / +3
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q WM P F LGS RPCAV WL G R Q +T A LP+ KSMVP + RKNC
Sbjct: 411 QRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPETKSMVPYMSHSRKNC 590
Query: 1166 RRACTYSVSW 1137
RR CTYSVSW
Sbjct: 591 RRECTYSVSW 620
Score = 54.2 bits (112), Expect(3) = 1e-029
Identities = 30/65 (46%), Positives = 33/65 (50%)
Frame = -1 / +3
Query: 1595 MTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSF 1416
MT P LT VPAPGP +YS **SV AK P P+G + T RE F
Sbjct: 162 MTRYPFHLTRPEVPAPGPVFMYSP**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCF 341
Query: 1415 QGRPR 1401
GRPR
Sbjct: 342 HGRPR 356
Score = 35.0 bits (70), Expect(2) = 2e-056
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / -2
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILG 1686
EA FT G FIDG +WL T P G
Sbjct: 148 EASAFTVGSFIDGDVWLAGTSIPFTTG 68
Score = 22.6 bits (43), Expect(3) = 1e-029
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / +2
Query: 1656 EPHGAVDERPGGERLGL 1606
EP VDE GER GL
Sbjct: 98 EPDVPVDEGADGERAGL 148
>gb|CL176112.1|CL176112 104_382_10892904_116_31763_120 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892904, DNA
sequence
Length = 634
Score = 149 bits (321), Expect(2) = 3e-053
Identities = 55/89 (61%), Positives = 72/89 (80%)
Frame = +1 / +1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRN 1182
+ +A GF+ MGF NTAGAE+HQAVAL VQ D + F NC+ + FQDTLY H++ QF+RN
Sbjct: 367 AAQADGFMAIGMGFQNTAGAEKHQAVALLVQSDKSIFLNCKMEGFQDTLYAHSKAQFYRN 546
Query: 1183 CVVSGTIDFIFGNSAAVFQNCLIITRRPM 1269
C++SGT+DFIFG++AAVFQNC++I R PM
Sbjct: 547 CIISGTVDFIFGDAAAVFQNCILILRPPM 633
Score = 122 bits (262), Expect(2) = 2e-036
Identities = 53/86 (61%), Positives = 56/86 (65%)
Frame = -1 / -3
Query: 1268 MGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCT 1089
+G R M QFWNTAA PKMKS VPE QLR NC C YSVSWN S QL S CT
Sbjct: 632 IGGRRMRMQFWNTAAASPKMKSTVPEMMQLR*NCALECAYSVSWNPSILQLRKMDLSDCT 453
Query: 1088 RSATAWCRSAPAVLWNPMFLQMNPDA 1011
SATAWC SAPAV W P+ + MNP A
Sbjct: 452 SSATAWCFSAPAVFWKPIPIAMNPSA 375
Score = 82.2 bits (173), Expect(2) = 3e-053
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +1 / +3
Query: 820 VPKGHQGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTAT 999
V + + RYVI VK G+Y+E V + + N+ GDG K+S VTG+KSFADGITT KTAT
Sbjct: 90 VGESYSYRYVIQVKEGVYEEYVTITRTMKNVTFLGDGSKKSIVTGKKSFADGITTFKTAT 269
Query: 1000 FS 1005
FS
Sbjct: 270 FS 275
Score = 52.8 bits (109), Expect(2) = 2e-036
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -1 / -1
Query: 1013 ASTEKVAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYL 840
+S KVAV VV+PSAKL PVT L PSP + L +T SS P+FT +TYL
Sbjct: 283 SSLLKVAVLKVVIPSAKLFLPVTMDFLEPSPKKVTFFMVLVMVTYSSYTPSFTWITYL 110
>gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232263, DNA
sequence
Length = 623
Score = 198 bits (427), Expect(2) = 5e-053
Identities = 77/147 (52%), Positives = 101/147 (68%)
Frame = +1 / -3
Query: 1156 HARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLV 1335
H+ RQF+R+C V GT+DF+FG++AAV Q C + RRP Q+N VTA GR DPN +G+V
Sbjct: 618 HSLRQFYRDCDVYGTVDFVFGDAAAVLQGCSLYARRPGPGQKNVVTAQGREDPNQNTGIV 439
Query: 1336 IQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKT 1515
+Q ++ L P + SYLGRPWK +SR V +++ + V P G++ WNG FAL T
Sbjct: 438 VQGGKVAAAADLVPVLGNVSSYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDT 259
Query: 1516 LYYAEYNNRGPGAGTSKRVNWPGFHVI 1596
LYYAEY NRGPGA TS RV W G+HV+
Sbjct: 258 LYYAEYMNRGPGADTSARVAWSGYHVL 178
Score = 75.8 bits (159), Expect(2) = 1e-025
Identities = 36/73 (49%), Positives = 44/73 (60%)
Frame = -1 / +2
Query: 1592 TWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQ 1413
TW P TL V APGPR +YSA* SV AK PF +P G T +++++ T RE SF
Sbjct: 182 TWYPDHATLAEVSAPGPRFMYSA*YSVSSAKVPFHSSHPRGWTSASILVCTNTVRE*SFH 361
Query: 1412 GRPRYEGILKRSG 1374
G PR E L R+G
Sbjct: 362 GLPR*EETLPRTG 400
Score = 63.4 bits (132), Expect(2) = 1e-025
Identities = 33/60 (55%), Positives = 35/60 (58%)
Frame = -1 / +2
Query: 1334 TSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRAC 1155
T P F LGS RPCAVT F GRR Q +TAA PK KS VP T+Q R N RR C
Sbjct: 440 TMPVFWLGSSRPCAVTTFFCPGPGRRA*RLQPCSTAAASPKTKSTVP*TSQSR*NWRREC 619
Score = 32.7 bits (65), Expect(2) = 5e-053
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / -3
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILGF 1689
+A FT FI G +WL T P+ LGF
Sbjct: 165 DAANFTVLDFIQGDLWLNSTSFPYTLGF 82
>gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407836, DNA
sequence
Length = 644
Score = 138 bits (296), Expect(2) = 1e-052
Identities = 58/113 (51%), Positives = 72/113 (63%)
Frame = +1 / +2
Query: 1015 SGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVS 1194
+GFI K + N+AG + QAVAL V GD + Y C QDTL+ H+ RQF+ + VS
Sbjct: 68 AGFIAKGVSILNSAGPGQGQAVALLVSGDRSVVYQCEVKGHQDTLFAHSNRQFYGDTDVS 247
Query: 1195 GTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRL 1353
GT+DFIFGN+AAV Q C I RRP QQ+ VTA GR DPN +G I CR+
Sbjct: 248 GTVDFIFGNAAAVLQRCGIQARRPRPGQQDVVTAQGRADPNQNTGFSIHRCRV 406
Score = 95.9 bits (203), Expect(2) = 1e-028
Identities = 51/111 (45%), Positives = 55/111 (49%)
Frame = -1 / -3
Query: 1349 RQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKN 1170
R WM +P F GS RPCAVT C G M Q +TAA LPKMKS VPET+ N
Sbjct: 402 RHRWMENPVFWFGSARPCAVTTSCCPGRGLLAWMPQRCSTAAALPKMKSTVPETSVSP*N 223
Query: 1169 CRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNP 1017
R C SVSW RSP T ATAW PA+L L M P
Sbjct: 222 WRLECANSVSW*PFTSHWYTTERSPLTSRATAWPCPGPALLRMLTPLAMKP 70
Score = 91.3 bits (193), Expect(2) = 1e-052
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +1 / +2
Query: 1375 PDRFKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGA 1554
PD + P YLGRPW+ ++R+ +M +++ V P G++ W+G A TLYY EY N G GA
Sbjct: 416 PDLGETPVYLGRPWRRYARVAVMATSLDGSVAPAGWLQWSGQPAPGTLYYGEYRNTGAGA 595
Query: 1555 GTSKRVNWPGFH 1590
T+ RV W G H
Sbjct: 596 ATAGRVTWTGVH 631
Score = 53.3 bits (110), Expect(2) = 1e-028
Identities = 28/72 (38%), Positives = 36/72 (50%)
Frame = -1 / -3
Query: 1589 WKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQG 1410
W P Q+T V AP P YS * V A P +P+G T+ + ++M R G
Sbjct: 630 WTPVQVTRPAVAAPAPVFRYSP*YRVPGAGWPDHCSHPAGATEPSREVAMTATRAYRRHG 451
Query: 1409 RPRYEGILKRSG 1374
RPRY G+ RSG
Sbjct: 450 RPRYTGVSPRSG 415
>gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 661
Score = 115 bits (246), Expect(3) = 1e-052
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = +1 / +3
Query: 1138 QDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPN 1317
QDTLY H RQ++R CV++GTIDFIFGN+ VFQNCLI R+ MDNQQN VTA GR +
Sbjct: 3 QDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERR 182
Query: 1318 MKSGLVIQNCRLVP 1359
G VI NC + P
Sbjct: 183 SAGGTVIHNCTIEP 224
Score = 113 bits (242), Expect(2) = 3e-036
Identities = 47/74 (63%), Positives = 49/74 (66%)
Frame = -1 / -1
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQL 1179
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKSMVP T
Sbjct: 223 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 44
Query: 1178 RKNCRRACTYSVSW 1137
R CR C YSVSW
Sbjct: 43 R*YCRLVCVYSVSW 2
Score = 103 bits (220), Expect(3) = 1e-052
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +1 / +3
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSK 1566
K+ ++LGRPWKE SR + ++S I F+ P+G++PW GDF L T YYAE NRG GA TSK
Sbjct: 258 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 437
Query: 1567 RVNWPG 1584
RV W G
Sbjct: 438 RVKWRG 455
Score = 61.1 bits (127), Expect(2) = 3e-036
Identities = 36/71 (50%), Positives = 40/71 (56%)
Frame = -1 / -1
Query: 1613 SASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMT 1434
SA + M P LT LLV AP PR SA** VLR KSP G +P G K + M +
Sbjct: 484 SACW*VMFLTPLHLTRLLVSAPAPRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*S 305
Query: 1433 RRENSFQGRPR 1401
RE SF GRPR
Sbjct: 304 VRECSFHGRPR 272
Score = 29.0 bits (57), Expect(3) = 1e-052
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1 / +3
Query: 1612 EPFTAGPFIDGAMWLKYTGAPHILG 1686
+ +T FI G WL G P ILG
Sbjct: 486 QKYTVESFIQGQHWLPQLGVPFILG 560
>gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405768, DNA
sequence
Length = 617
Score = 114 bits (243), Expect(3) = 1e-052
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +1 / -2
Query: 1393 PSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRV 1572
P++LGRPWK +SR V+M S + V G++ W+GDFALKTL+Y EY N GPGA T+ RV
Sbjct: 394 PTFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRV 215
Query: 1573 NWPGFHVI 1596
NWPG+HVI
Sbjct: 214 NWPGYHVI 191
Score = 96.4 bits (204), Expect(3) = 1e-052
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +1 / -2
Query: 1174 FRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRL 1353
+R C VSGT+DF+FGN+AAV Q C + R P+ QQN+VTA GR DPN +G + CR+
Sbjct: 616 YRECFVSGTVDFVFGNAAAVLQGCALAARLPLRGQQNAVTAQGREDPNQNTGTSLHRCRV 437
Query: 1354 VPDQKLFP 1377
VP L P
Sbjct: 436 VPAPDLAP 413
Score = 79.0 bits (166), Expect(3) = 3e-034
Identities = 34/62 (54%), Positives = 37/62 (59%)
Frame = -1 / +3
Query: 1361 SGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQ 1182
+GT R W P F LGS RPCAVT FCW GRR Q +TAA LPK KS VP+T
Sbjct: 429 AGTTRHLWRDVPVFWLGSSRPCAVTAFCWPRRGRRAASAQPCSTAAALPKTKSTVPDTKH 608
Query: 1181 LR 1176
R
Sbjct: 609 SR 614
Score = 70.7 bits (148), Expect(3) = 3e-034
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = -1 / +3
Query: 1595 MTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSF 1416
MTW PGQLT V APGP YS * SVL AKSP +P T ++ SM T RE +F
Sbjct: 192 MTW*PGQLTRPAVAAPGPSFWYSP*KSVLSAKSPSHSSHPLASTCASRYDSMTTVRE*AF 371
Query: 1415 QGRPRYEG 1392
GRPR G
Sbjct: 372 HGRPRNVG 395
Score = 37.7 bits (76), Expect(3) = 1e-052
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1 / -2
Query: 1591 VIGRKEAEPFTAGPFIDGAMWLKYTGAPHILGFKF 1695
+ R A FT G FI G WL TG P+I G F
Sbjct: 193 ITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL*F 89
Score = 36.3 bits (73), Expect(3) = 3e-034
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 1694 NLKPSMCGAPVYLSHMAPSMNGPAVNGSAS 1605
N +PSM G PV LS + P MN P VN +A+
Sbjct: 90 NQRPSM*GTPVPLSQLPP*MNWPTVNCTAT 179
>gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090o22, DNA
sequence
Length = 492
Score = 114 bits (244), Expect(2) = 2e-051
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +1 / +1
Query: 1393 PSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRV 1572
P YLGRPW+ +SR V+MES + V P G++ W+G FAL TLYY EY N GPGAGTS+RV
Sbjct: 271 PVYLGRPWRRYSRTVVMESFLDRSVSPAGWLEWSGQFALSTLYYGEYGNTGPGAGTSRRV 450
Query: 1573 NWPGFH 1590
WPG H
Sbjct: 451 TWPGVH 468
Score = 111 bits (237), Expect(2) = 2e-051
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1 / +1
Query: 1120 CRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAH 1299
C A+QDTLYVH+ RQF+ ++GT+DFIFGN+A V Q+C I RRP Q+++VTA
Sbjct: 4 CGIQAYQDTLYVHSGRQFYAGTDIAGTVDFIFGNAAVVLQSCDIQARRPSPGQEDTVTAQ 183
Query: 1300 GRTDPNMKSGLVIQNCRL 1353
GRTDPN +G+ I CR+
Sbjct: 184 GRTDPNQNTGISIHRCRV 237
Score = 74.8 bits (157), Expect(2) = 2e-026
Identities = 36/70 (51%), Positives = 39/70 (55%)
Frame = -1 / -2
Query: 1340 WMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRR 1161
WM P F GSVRPCAVT +G R M Q +T A LPKMKS VP + NCR
Sbjct: 224 WMEMPVFWFGSVRPCAVTVSSCPGLGLRAWMSQLCSTTAALPKMKSTVPAMSVPA*NCRP 45
Query: 1160 ACTYSVSWNA 1131
T SVSW A
Sbjct: 44 EWT*SVSWYA 15
Score = 67.0 bits (140), Expect(2) = 2e-026
Identities = 34/65 (52%), Positives = 39/65 (60%)
Frame = -1 / -2
Query: 1583 PGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGRP 1404
PG +T LVPAPGP L YS * SVLRA P +P+G T + LSM T RE GRP
Sbjct: 461 PGHVTRRLVPAPGPVLPYSP*YSVLRANCPDHSSHPAGETDRSRKLSMTTVREYLRHGRP 282
Query: 1403 RYEGI 1389
R G+
Sbjct: 281 R*TGV 267
>gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 513
Score = 119 bits (255), Expect(2) = 1e-050
Identities = 46/77 (59%), Positives = 55/77 (71%)
Frame = +1 / +1
Query: 1129 DAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRT 1308
D +QDTLY H RQ++R CV++GTIDFIFGN+ VFQNCLI R+ MDNQQN VTA GR
Sbjct: 1 DGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRK 180
Query: 1309 DPNMKSGLVIQNCRLVP 1359
+ G VI NC + P
Sbjct: 181 ERRSAGGTVIHNCTIEP 231
Score = 113 bits (242), Expect(2) = 3e-036
Identities = 47/74 (63%), Positives = 49/74 (66%)
Frame = -1 / -2
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQL 1179
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKSMVP T
Sbjct: 230 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 51
Query: 1178 RKNCRRACTYSVSW 1137
R CR C YSVSW
Sbjct: 50 R*YCRLVCVYSVSW 9
Score = 103 bits (220), Expect(2) = 1e-050
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +1 / +1
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSK 1566
K+ ++LGRPWKE SR + ++S I F+ P+G++PW GDF L T YYAE NRG GA TSK
Sbjct: 265 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 444
Query: 1567 RVNWPG 1584
RV W G
Sbjct: 445 RVKWRG 462
Score = 61.1 bits (127), Expect(2) = 3e-036
Identities = 36/71 (50%), Positives = 40/71 (56%)
Frame = -1 / -2
Query: 1613 SASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMT 1434
SA + M P LT LLV AP PR SA** VLR KSP G +P G K + M +
Sbjct: 491 SACW*VMFLTPLHLTRLLVSAPAPRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*S 312
Query: 1433 RRENSFQGRPR 1401
RE SF GRPR
Sbjct: 311 VRECSFHGRPR 279
>gb|CW281478.1|CW281478 104_757_11408201_116_35463_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408201, DNA
sequence
Length = 479
Score = 193 bits (415), Expect(2) = 1e-050
Identities = 76/128 (59%), Positives = 92/128 (71%)
Frame = +1 / +1
Query: 976 ITTMKTATFSVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYV 1155
ITT TAT +GF+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD +QDTLY
Sbjct: 10 ITTKDTATMEALGNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGYQDTLYT 189
Query: 1156 HARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLV 1335
H RQ++R CV++GTIDFIFGN+ VFQNCLI R+ MDNQQN VTA GR + G V
Sbjct: 190 HTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAGGTV 369
Query: 1336 IQNCRLVP 1359
I NC + P
Sbjct: 370 IHNCTIEP 393
Score = 163 bits (350), Expect = 1e-038
Identities = 76/128 (59%), Positives = 80/128 (62%)
Frame = -1 / -1
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQL 1179
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKSMVP T
Sbjct: 392 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 213
Query: 1178 RKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEK 999
R CR C YSVSW SNR *NA S CTRSATAW APAV P+ NP S
Sbjct: 212 R*YCRLVCVYSVSWYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASI 33
Query: 998 VAVFMVVM 975
VAV +VVM
Sbjct: 32 VAVSLVVM 9
Score = 30.4 bits (60), Expect(2) = 1e-050
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 1387 KIPSYLGRPWKEFSR 1431
K+ ++LGRPWKE SR
Sbjct: 427 KLRTFLGRPWKEHSR 471
>gb|CW172749.1|CW172749 104_584_11156458_148_36543_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156458, DNA
sequence
Length = 626
Score = 199 bits (430), Expect = 9e-050
Identities = 76/169 (44%), Positives = 108/169 (63%)
Frame = +1 / +1
Query: 979 TTMKTATFSVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVH 1158
T + T +V + F+ +++ N+AG +HQAVALRV DL+AFY C F +QDTLYVH
Sbjct: 118 TCLLCCTAAVVGNNFLARDLTIENSAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVH 297
Query: 1159 ARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVI 1338
+ RQFFR+C + GTIDF+FGN+A V Q C + R+P+ NQ N TA GR DPN +G+ I
Sbjct: 298 SLRQFFRDCDIYGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISI 477
Query: 1339 QNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYM 1485
C++ L +YLGRPWK++SR V ++S + + P G++
Sbjct: 478 HRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWL 624
Score = 127 bits (273), Expect = 4e-028
Identities = 58/98 (59%), Positives = 61/98 (62%)
Frame = -1 / -1
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q WM P F LGS RPCAV WL G R Q +T A LPK KSMVP +Q RKNC
Sbjct: 485 QRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPKTKSMVP*MSQSRKNC 306
Query: 1166 RRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPA 1053
RR CTYSVSW + Q *NA RS TRSATAWC PA
Sbjct: 305 RRECTYSVSW*PTKLQR*NADRSAPTRSATAWCLDGPA 192
>gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 108 bits (230), Expect(3) = 2e-049
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +1 / -2
Query: 1147 LYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKS 1326
LY H RQ++R CV++GTIDFIFGN+ VFQNCLI R+ MDNQQN VTA GR +
Sbjct: 654 LYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAG 475
Query: 1327 GLVIQNCRLVP 1359
G VI NC + P
Sbjct: 474 GTVIHNCTIEP 442
Score = 105 bits (223), Expect(2) = 1e-033
Identities = 44/71 (61%), Positives = 46/71 (64%)
Frame = -1 / +2
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQL 1179
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKSMVP T
Sbjct: 443 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 622
Query: 1178 RKNCRRACTYS 1146
R CR C YS
Sbjct: 623 R*YCRLVCVYS 655
Score = 103 bits (220), Expect(3) = 2e-049
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +1 / -2
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSK 1566
K+ ++LGRPWKE SR + ++S I F+ P+G++PW GDF L T YYAE NRG GA TSK
Sbjct: 408 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 229
Query: 1567 RVNWPG 1584
RV W G
Sbjct: 228 RVKWRG 211
Score = 61.1 bits (127), Expect(2) = 1e-033
Identities = 36/71 (50%), Positives = 40/71 (56%)
Frame = -1 / +2
Query: 1613 SASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMT 1434
SA + M P LT LLV AP PR SA** VLR KSP G +P G K + M +
Sbjct: 182 SACW*VMFLTPLHLTRLLVSAPAPRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*S 361
Query: 1433 RRENSFQGRPR 1401
RE SF GRPR
Sbjct: 362 VRECSFHGRPR 394
Score = 25.8 bits (50), Expect(3) = 2e-049
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / -2
Query: 1612 EPFTAGPFIDGAMWLKYTGAPHILG 1686
+ +T FI G WL G P I G
Sbjct: 180 QKYTVESFIQGQHWLPQLGVPFIPG 106
>gb|CW349543.1|CW349543 fsbb001f010h01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f010h01, DNA
sequence
Length = 594
Score = 142 bits (305), Expect(2) = 7e-049
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1 / +2
Query: 1006 VEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNC 1185
V+ GFI +GF NTAGA +HQAVAL VQ D + F NCR DA+QDTLY H++ QF+RNC
Sbjct: 341 VQGDGFIAIALGFRNTAGAAKHQAVALLVQSDRSIFLNCRMDAYQDTLYAHSKAQFYRNC 520
Query: 1186 VVSGTIDFIFGNSAAVFQNCLII 1254
V+SGTIDF+FG++AAVFQNC+++
Sbjct: 521 VISGTIDFVFGDAAAVFQNCILL 589
Score = 117 bits (251), Expect(2) = 8e-034
Identities = 51/80 (63%), Positives = 53/80 (66%)
Frame = -1 / -1
Query: 1244 QFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCR 1065
QFWNTAA PK KSMVPE TQLR NC C YSVSW AS RQL S CT SATAWC
Sbjct: 579 QFWNTAAASPKTKSMVPEMTQLR*NCALECAYSVSWYASMRQLRKMDLSDCTSSATAWCF 400
Query: 1064 SAPAVLWNPMFLQMNPDAST 1005
+APAV NP + MNP T
Sbjct: 399 AAPAVFRNPSAMAMNPSPCT 340
Score = 78.0 bits (164), Expect(2) = 7e-049
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +1 / +2
Query: 841 RYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFS 1005
RY+IYVK G+Y E V + + N+ MYGDG ++ +TG ++FADG+TT KTATFS
Sbjct: 47 RYLIYVKQGVYQEYVTITRAMENVTMYGDGAMKTVITGSRNFADGLTTYKTATFS 211
Score = 52.4 bits (108), Expect(2) = 8e-034
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -1 / -1
Query: 1001 KVAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYL 840
KVAV VV PSAK PV + + PSPYM +++L +T S P FT*+ YL
Sbjct: 207 KVAVL*VVRPSAKFRLPVMTVFMAPSPYMVTFSIALVMVTYSWYTPCFT*IRYL 46
>gb|CW468784.1|CW468784 fsbb001f221c20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221c20, DNA
sequence
Length = 465
Score = 166 bits (356), Expect(2) = 1e-047
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = +1 / -1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRN 1182
+ +A GF+ MGF NTAGAE+HQAVAL VQ D + F NC+ + FQDTLY H++ QF+RN
Sbjct: 282 AAQADGFMAIGMGFQNTAGAEKHQAVALLVQSDKSIFLNCKMEGFQDTLYAHSKAQFYRN 103
Query: 1183 CVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQN 1284
C++SGT+DFIFG++AAVFQNC++I RRPMDNQQN
Sbjct: 102 CIISGTVDFIFGDAAAVFQNCILILRRPMDNQQN 1
Score = 141 bits (303), Expect(2) = 4e-036
Identities = 59/91 (64%), Positives = 62/91 (68%)
Frame = -1 / +2
Query: 1283 FCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAA 1104
FCWLS+GRR M QFWNTAA PKMKS VPE QLR NC C YSVSWN S QL
Sbjct: 2 FCWLSIGRRRMRMQFWNTAAASPKMKSTVPEMMQLR*NCALECAYSVSWNPSILQLRKMD 181
Query: 1103 RSPCTRSATAWCRSAPAVLWNPMFLQMNPDA 1011
S CT SATAWC SAPAV W P+ + MNP A
Sbjct: 182 LSDCTSSATAWCFSAPAVFWKPIPIAMNPSA 274
Score = 47.3 bits (97), Expect(2) = 1e-047
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +1 / -2
Query: 922 GDGPKQSRVTGRKSFADGITTMKTA 996
GDG K+S VTG+KSFADGITT KT+
Sbjct: 458 GDGSKKSIVTGKKSFADGITTFKTS 384
Score = 32.7 bits (65), Expect(2) = 4e-036
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +1
Query: 1001 KVAVFMVVMPSAKLLRPVTRLCLGPSP 921
++ V VV+PSAKL PVT L PSP
Sbjct: 379 RLLVLKVVIPSAKLFLPVTMDFLEPSP 459
>gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197697, DNA
sequence
Length = 667
Score = 127 bits (272), Expect(3) = 6e-047
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1384 FKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTS 1563
F + +YLGRPWK +SR VIM+S + V P G+MPW+GD+AL TL+YAEYNN GPGA TS
Sbjct: 486 FAVATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTS 307
Query: 1564 KRVNWPGFHVI 1596
+RV WPGFHV+
Sbjct: 306 RRVAWPGFHVL 274
Score = 87.2 bits (184), Expect(2) = 2e-023
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = -1 / +2
Query: 1592 TWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQ 1413
TWKPG TLLLV APGP LLYSA* SVL A SP G++P+G T ++ M+T RE SF
Sbjct: 278 TWKPGHATLLLVSAPGPELLYSA*KSVLSA*SPSHGIHPAGSTSASTSDCMITVRE*SFH 457
Query: 1412 GRPR 1401
GRPR
Sbjct: 458 GRPR 469
Score = 72.1 bits (151), Expect(3) = 6e-047
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1 / -2
Query: 1207 FIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
++FGN+A VFQ+C + +R PM Q N+VTA GRTDPN +G +Q C + +L
Sbjct: 666 YVFGNAAVVFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTVAAAPEL 502
Score = 44.6 bits (91), Expect(2) = 2e-023
Identities = 21/44 (47%), Positives = 22/44 (50%)
Frame = -1 / +2
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELP 1215
Q W P F GSVRPCAVT +G Q WNT A LP
Sbjct: 527 QPWSVVPVFWFGSVRPCAVTVLLCPCIGSLE*RLQSWNTTAALP 658
Score = 29.5 bits (58), Expect(3) = 6e-047
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1 / -2
Query: 1597 GRKEAEPFTAGPFIDGAMWLKYTGAPHILG 1686
G +A FT G + G WL TG P G
Sbjct: 270 GTADAANFTVGNMVLGDFWLPQTGVPFTSG 181
>gb|CW241951.1|CW241951 104_701_11219058_148_37553_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 563
Score = 133 bits (284), Expect(3) = 2e-044
Identities = 53/115 (46%), Positives = 70/115 (60%)
Frame = +1 / +1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRN 1182
+V +GF+ +++ F NTAG HQAVALRV D +AF+ + QDTLY H+ RQ +R+
Sbjct: 13 AVAGAGFVARDLTFRNTAGPAAHQAVALRVDSDRSAFFRVAVEGHQDTLYAHSLRQLYRD 192
Query: 1183 CVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNC 1347
C V+GT+DF+FGN V Q L+ T Q SVTA GR DPN +G C
Sbjct: 193 CRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPNQNTGFSFHGC 357
Score = 109 bits (233), Expect(3) = 4e-028
Identities = 54/114 (47%), Positives = 57/114 (50%)
Frame = -1 / -1
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q W P F LGS RPCAVT W V R T LPK KS VP T Q R +C
Sbjct: 356 QPWKEKPVFWLGSFRPCAVTLPVWPGASGSVATRLRCTTTMPLPKTKSTVPATRQSR*SC 177
Query: 1166 RRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDAST 1005
R C YSVSW S A RS TRSATAWC + PAV N NP +T
Sbjct: 176 RSECAYSVSWCPSTATRKKAERSESTRSATAWCAAGPAVFLNVRSRATNPAPAT 15
Score = 54.2 bits (112), Expect(3) = 2e-044
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPW 1491
K P+YLGRPWK FSR+V+MES + ++ G++ W
Sbjct: 370 KYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 474
Score = 33.6 bits (67), Expect(3) = 2e-044
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 1507 LKTLYYAEYNNRGPGAG 1557
L TL+Y EY N GPGAG
Sbjct: 508 LATLFYGEYKNYGPGAG 558
Score = 29.9 bits (59), Expect(3) = 4e-028
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3 / -3
Query: 1491 PGHVPLWLDEVGDGALHDDEARELLPGAAQVR 1396
P P L+ LH D+ RE LP AAQVR
Sbjct: 474 PLEPPAGLNSRAQVGLHHDDPREGLPRAAQVR 379
Score = 25.8 bits (50), Expect(3) = 4e-028
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 1556 PAPGPRLLYSA**SVLR 1506
PAPGP LYS * SV R
Sbjct: 557 PAPGP*FLYSP*NSVAR 507
>gb|CW261864.1|CW261864 104_729_11229744_148_35206_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229744, DNA
sequence
Length = 711
Score = 122 bits (262), Expect(4) = 4e-043
Identities = 49/103 (47%), Positives = 64/103 (62%)
Frame = +1 / +1
Query: 1063 ERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQN 1242
E QAVAL D + + C +QDTLY RQF+R C +SGT+DFIFG++AAVFQN
Sbjct: 310 ELGQAVALLSNSDQSVVFRCALRGYQDTLYAELGRQFYRECKISGTVDFIFGDAAAVFQN 489
Query: 1243 CLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
C I+ R P+ QQN++TA GR P+ G Q+C + D L
Sbjct: 490 CDILARLPIQGQQNTLTAEGRDKPDSNGGFCFQSCTVAADDDL 618
Score = 47.3 bits (97), Expect(4) = 4e-043
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1 / +2
Query: 865 GLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEASGFIC 1029
GLY E V++ +D N+ + GDG + ++G + ADG T +TA S F+C
Sbjct: 2 GLYKEFVILGEDAWNVTLIGDGMDATVISGSRCCADGFHTPQTAVLSNRDFSFLC 166
Score = 41.4 bits (84), Expect(4) = 4e-043
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 1390 IPSYLGRPWKEFSRLVIMESTIAD 1461
+ +YLGRPWK +SR++ M+STI++
Sbjct: 634 VETYLGRPWKAYSRVIFMKSTISN 705
Score = 22.1 bits (42), Expect(4) = 4e-043
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1 / +1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVAL 1086
+V GFI +++ NTAG + A+
Sbjct: 244 AVLGRGFIARDLRVENTAGPRKELGQAV 327
>gb|CW357408.1|CW357408 fsbb001f024a20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024a20, DNA
sequence
Length = 711
Score = 160 bits (343), Expect(2) = 7e-043
Identities = 73/159 (45%), Positives = 93/159 (58%)
Frame = +1 / +3
Query: 655 RRRLLSSEQDEKGWPVWMRSPERKLLASGNQPKPNAIVAKDGSGQFKSIQQAVDAVPKGH 834
RR L W + RK+ KP+ VAKDGSG F++I A+ VP
Sbjct: 231 RRLLADHAGGVPSWMPDAKRRLRKVSPGDKGFKPDVTVAKDGSGDFRTINAALAKVPVKS 410
Query: 835 QGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEA 1014
YV+YVKAG Y E V VP++ N+ M GDG ++ +TG KSF ITT TAT
Sbjct: 411 AATYVMYVKAGTYREYVSVPRNVTNLVMVGDGATKTVITGDKSFMMNITTKDTATMEALG 590
Query: 1015 SGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFD 1131
+GF+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD
Sbjct: 591 NGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFD 707
Score = 113 bits (241), Expect = 1e-023
Identities = 65/138 (47%), Positives = 76/138 (55%)
Frame = -1 / -3
Query: 1130 SNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKVAVFMVVMPSAKLLRP 951
SNR *NA S CTRSATAW APAV P+ NP S VAV +VVM KLL P
Sbjct: 706 SNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASIVAVSLVVMFIMKLLSP 527
Query: 950 VTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYLP*WPLGTASTACWMLLNCPLPSL 771
V + + PSP + GT T S PAFT MTY+ GT ++A M+L PLPSL
Sbjct: 526 VITVLVAPSPTITRFVTFRGTDTYSLYVPAFTYMTYVAALFTGTLASAALMVLKSPLPSL 347
Query: 770 ATIAFGLGWLPDASSFLS 717
AT+ GL L +F S
Sbjct: 346 ATVTSGLKPLSPGETFRS 293
Score = 40.9 bits (83), Expect(2) = 7e-043
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1 / +3
Query: 445 SRSDDLETWLTGVMTFMDTCVDGF 516
S DDL TWL+ +T+ +TC+DGF
Sbjct: 24 SAVDDLRTWLSSALTYQETCLDGF 95
>gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A01_A002 3', mRNA sequence
Length = 599
Score = 114 bits (243), Expect(3) = 2e-042
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +1 / +1
Query: 1393 PSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRV 1572
P++LGRPWK +SR V+M S + V G++ W+GDFALKTL+Y EY N GPGA T+ RV
Sbjct: 175 PTFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRV 354
Query: 1573 NWPGFHVI 1596
NWPG+HVI
Sbjct: 355 NWPGYHVI 378
Score = 70.7 bits (148), Expect(3) = 2e-027
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = -1 / -1
Query: 1595 MTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSF 1416
MTW PGQLT V APGP YS * SVL AKSP +P T ++ SM T RE +F
Sbjct: 377 MTW*PGQLTRPAVAAPGPSFWYSP*KSVLSAKSPSHSSHPLASTCASRYDSMTTVRE*AF 198
Query: 1415 QGRPRYEG 1392
GRPR G
Sbjct: 197 HGRPRNVG 174
Score = 62.0 bits (129), Expect(3) = 2e-042
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +1 / +1
Query: 1222 SAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFP 1377
+AAV Q C + R P+ QQN+VT GR DPN +G + CR+VP L P
Sbjct: 1 AAAVMQGCALAARLPLRGQQNAVTVQGREDPNQNTGTSLHRCRVVPAPDLAP 156
Score = 56.1 bits (116), Expect(3) = 2e-027
Identities = 24/46 (52%), Positives = 25/46 (54%)
Frame = -1 / -1
Query: 1361 SGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAA 1224
+GT R W P F LGS RPC VT FCW GRR Q TAA
Sbjct: 140 AGTTRHLWRDVPVFWLGSSRPCTVTAFCWPRRGRRAASAQPCITAA 3
Score = 37.7 bits (76), Expect(3) = 2e-042
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1 / +1
Query: 1591 VIGRKEAEPFTAGPFIDGAMWLKYTGAPHILGFKF 1695
+ R A FT G FI G WL TG P+I G F
Sbjct: 376 ITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL*F 480
Score = 36.3 bits (73), Expect(3) = 2e-027
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 1694 NLKPSMCGAPVYLSHMAPSMNGPAVNGSAS 1605
N +PSM G PV LS + P MN P VN +A+
Sbjct: 479 NQRPSM*GTPVPLSQLPP*MNWPTVNCTAT 390
>gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160k16, DNA
sequence
Length = 538
Score = 126 bits (270), Expect(2) = 2e-042
Identities = 44/67 (65%), Positives = 56/67 (83%)
Frame = +1 / -1
Query: 1396 SYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVN 1575
+YLGRPWK++SR+V M+S I D V+PEG++ W+GDFAL TLYY EY+N GPGAG + RV
Sbjct: 328 TYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAARVK 149
Query: 1576 WPGFHVI 1596
WPGFHV+
Sbjct: 148 WPGFHVM 128
Score = 89.0 bits (188), Expect(3) = 6e-031
Identities = 41/66 (62%), Positives = 43/66 (65%)
Frame = -1 / +3
Query: 1595 MTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMTRRENSF 1416
MTW PG LTL PAPGP LLYS **SV AKSP +PSG T+S M M T RE F
Sbjct: 129 MTWNPGHLTLAATPAPGPVLLYSP**SVSSAKSPSHASHPSGRTRSPM*DCMNTTREYCF 308
Query: 1415 QGRPRY 1398
GRPRY
Sbjct: 309 HGRPRY 326
Score = 68.9 bits (144), Expect(2) = 2e-042
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1 / -1
Query: 1216 GNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRL 1353
GN+AAVFQNC ++ RRP+ +Q+NSVTA GR D NM +G Q C +
Sbjct: 538 GNAAAVFQNCSLLPRRPLPDQKNSVTAQGRLDANMTTGFAFQFCNV 401
Score = 60.6 bits (126), Expect(3) = 6e-031
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = -1 / +3
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAEL 1218
Q W +P ML S PCAVTEF W GRR QFWNTAA L
Sbjct: 408 QNWKANPVVMLASSLPCAVTEFFWSGSGRRGRREQFWNTAAAL 536
Score = 25.4 bits (49), Expect(3) = 6e-031
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 1694 NLKPSMCGAPVYLSHMAPSMNGPAVNGSAS 1605
+++P++ PV +HM PSMN V AS
Sbjct: 27 DVRPAVYLTPVGGNHMLPSMNCATVKLPAS 116
>gb|CW339306.1|CW339306 104_840_11485203_148_36139_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 669
Score = 162 bits (349), Expect(2) = 1e-041
Identities = 62/125 (49%), Positives = 85/125 (68%)
Frame = +1 / +1
Query: 979 TTMKTATFSVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVH 1158
T + T +V + F+ +++ N+AG +HQAVALRV DL+AFY C F +QDTLYVH
Sbjct: 217 TCLLCCTAAVVGNNFLARDLTIENSAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVH 396
Query: 1159 ARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVI 1338
+ RQFFR+C + GTIDF+FGN+A V Q C + R+P+ NQ N TA GR DPN +G+ I
Sbjct: 397 SLRQFFRDCDIYGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISI 576
Query: 1339 QNCRL 1353
C++
Sbjct: 577 HRCKV 591
Score = 127 bits (273), Expect = 4e-028
Identities = 58/98 (59%), Positives = 61/98 (62%)
Frame = -1 / -2
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q WM P F LGS RPCAV WL G R Q +T A LPK KSMVP +Q RKNC
Sbjct: 584 QRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPKTKSMVP*MSQSRKNC 405
Query: 1166 RRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPA 1053
RR CTYSVSW + Q *NA RS TRSATAWC PA
Sbjct: 404 RRECTYSVSW*PTKLQR*NADRSAPTRSATAWCLDGPA 291
Score = 30.4 bits (60), Expect(2) = 1e-041
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 1396 SYLGRPWKEFSR 1431
+YLGRPWK++SR
Sbjct: 633 TYLGRPWKQYSR 668
>gb|CW374999.1|CW374999 fsbb001f052c13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f052c13, DNA
sequence
Length = 660
Score = 105 bits (223), Expect(3) = 2e-041
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1 / -1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRN 1182
+ +A GF+ MGF NTAGAE+HQAVAL VQ D + F NC+ + FQDTLY H++ QF+RN
Sbjct: 195 AAQADGFMAIGMGFQNTAGAEKHQAVALLVQSDKSIFLNCKMEGFQDTLYAHSKAQFYRN 16
Query: 1183 CVVSG 1197
C++SG
Sbjct: 15 CIISG 1
Score = 87.7 bits (185), Expect(3) = 9e-032
Identities = 37/62 (59%), Positives = 39/62 (62%)
Frame = -1 / +2
Query: 1196 PETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNP 1017
PE QLR NC C YSVSWN S QL S CT SATAWC SAPAV W P+ + MNP
Sbjct: 2 PEMMQLR*NCALECAYSVSWNPSILQLRKMDLSDCTSSATAWCFSAPAVFWKPIPIAMNP 181
Query: 1016 DA 1011
A
Sbjct: 182 SA 187
Score = 82.2 bits (173), Expect(3) = 2e-041
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +1 / -3
Query: 820 VPKGHQGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTAT 999
V + + RYVI VK G+Y+E V + + N+ GDG K+S VTG+KSFADGITT KTAT
Sbjct: 472 VGESYSYRYVIQVKEGVYEEYVTITRTMKNVTFLGDGSKKSIVTGKKSFADGITTFKTAT 293
Query: 1000 FS 1005
FS
Sbjct: 292 FS 287
Score = 52.8 bits (109), Expect(3) = 9e-032
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -1 / +3
Query: 1013 ASTEKVAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYL 840
+S KVAV VV+PSAKL PVT L PSP + L +T SS P+FT +TYL
Sbjct: 279 SSLLKVAVLKVVIPSAKLFLPVTMDFLEPSPKKVTFFMVLVMVTYSSYTPSFTWITYL 452
Score = 37.3 bits (75), Expect(3) = 9e-032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3 / +1
Query: 846 VPPLMAFGHGVHGLLDALELPAAVLGHDRVRL 751
+P ++ HG L+D LEL AAVL H VRL
Sbjct: 565 IPSVVGLWHGGERLVDGLELAAAVLRHHHVRL 660
Score = 29.5 bits (58), Expect(3) = 2e-041
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 756 ERDRGQGRQRAVQEHPAG 809
ER G+GRQR VQ+H G
Sbjct: 655 ERGGGEGRQRQVQDHQRG 602
>gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479103, DNA
sequence
Length = 666
Score = 103 bits (220), Expect(3) = 2e-040
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +1 / +1
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSK 1566
K+ ++LGRPWKE SR + ++S I F+ P+G++PW GDF L T YYAE NRG GA TSK
Sbjct: 193 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 372
Query: 1567 RVNWPG 1584
RV W G
Sbjct: 373 RVKWRG 390
Score = 83.5 bits (176), Expect(2) = 3e-027
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = -1 / -2
Query: 1358 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKS 1203
G+ Q WMT P L S+RPCAVT FCWLSM R MRQFWNT LPKMKS
Sbjct: 158 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKS 3
Score = 77.6 bits (163), Expect(3) = 2e-040
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = +1 / +1
Query: 1201 IDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVP 1359
IDFIFGN+ VFQNCLI R+ MDNQQN VTA GR + G VI NC + P
Sbjct: 1 IDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEP 159
Score = 61.1 bits (127), Expect(2) = 3e-027
Identities = 36/71 (50%), Positives = 40/71 (56%)
Frame = -1 / -2
Query: 1613 SASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SVLRAKSPFQGMYPSGLTKSAMVLSMMT 1434
SA + M P LT LLV AP PR SA** VLR KSP G +P G K + M +
Sbjct: 419 SACW*VMFLTPLHLTRLLVSAPAPRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*S 240
Query: 1433 RRENSFQGRPR 1401
RE SF GRPR
Sbjct: 239 VRECSFHGRPR 207
Score = 25.8 bits (50), Expect(3) = 2e-040
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / +1
Query: 1612 EPFTAGPFIDGAMWLKYTGAPHILG 1686
+ +T FI G WL G P I G
Sbjct: 421 QKYTVESFIQGQHWLPQLGVPFIPG 495
>gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 636
Score = 86.8 bits (183), Expect(4) = 3e-040
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +1 / -3
Query: 1138 QDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPN 1317
QDTLY H+ RQ +R+C V+GT+DF+FGN V Q L+ T Q SVTA GR DPN
Sbjct: 628 QDTLYAHSLRQLYRDCRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPN 449
Query: 1318 MKSGLVIQNC 1347
+G C
Sbjct: 448 QNTGFSFHGC 419
Score = 75.3 bits (158), Expect(3) = 2e-021
Identities = 35/70 (50%), Positives = 36/70 (51%)
Frame = -1 / +3
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q W P F LGS RPCAVT W V R T LPK KS VP T Q R +C
Sbjct: 420 QPWKEKPVFWLGSFRPCAVTLPVWPGASGSVATRLRCTTTMPLPKTKSTVPATRQSR*SC 599
Query: 1166 RRACTYSVSW 1137
R C YSVSW
Sbjct: 600 RSECAYSVSW 629
Score = 57.0 bits (118), Expect(4) = 3e-040
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -3
Query: 1507 LKTLYYAEYNNRGPGAGTSKRVNWPGFHVI 1596
L TL+Y EY N GPGAG + RV WPG+HVI
Sbjct: 268 LATLFYGEYKNYGPGAGVAGRVKWPGYHVI 179
Score = 54.2 bits (112), Expect(4) = 3e-040
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPW 1491
K P+YLGRPWK FSR+V+MES + ++ G++ W
Sbjct: 406 KYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 302
Score = 37.3 bits (75), Expect(3) = 2e-021
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 1595 MTWKPGQLTLLLVPAPGPRLLYSA**SVLR 1506
+TW PG T PAPGP LYS * SV R
Sbjct: 180 ITW*PGHFTRPATPAPGP*FLYSP*NSVAR 269
Score = 29.9 bits (59), Expect(3) = 2e-021
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3 / +2
Query: 1491 PGHVPLWLDEVGDGALHDDEARELLPGAAQVR 1396
P P L+ LH D+ RE LP AAQVR
Sbjct: 302 PLEPPAGLNSRAQVGLHHDDPREGLPRAAQVR 397
Score = 26.3 bits (51), Expect(4) = 3e-040
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1 / -3
Query: 1609 AEPFTAGPFIDGAMWLKYTG 1668
A FT FIDG WL TG
Sbjct: 163 ASRFTVRRFIDGLAWLPGTG 104
>gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_1_D09_A012 3', mRNA sequence
Length = 654
Score = 153 bits (328), Expect(2) = 3e-040
Identities = 57/122 (46%), Positives = 76/122 (62%)
Frame = +1 / +2
Query: 1231 VFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGR 1410
V Q C + R+P+ NQ N TA GR DPN +G+ I C++ L +YLGR
Sbjct: 2 VLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGR 181
Query: 1411 PWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFH 1590
PWK++SR V ++S + + P G++ W+G+FAL TLYY EY N GPGAGTS RV W G+
Sbjct: 182 PWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYR 361
Query: 1591 VI 1596
VI
Sbjct: 362 VI 367
Score = 35.0 bits (70), Expect(2) = 3e-040
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / +2
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILG 1686
EA FT G FIDG +WL T P G
Sbjct: 380 EASAFTVGSFIDGDVWLAGTSIPFTTG 460
>gb|CW433383.1|CW433383 fsbb001f148j05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148j05, DNA
sequence
Length = 689
Score = 133 bits (284), Expect(2) = 7e-040
Identities = 53/115 (46%), Positives = 70/115 (60%)
Frame = +1 / +1
Query: 1003 SVEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRN 1182
+V +GF+ +++ F NTAG HQAVALRV D +AF+ + QDTLY H+ RQ +R+
Sbjct: 142 AVAGAGFVARDLTFRNTAGPAAHQAVALRVDSDRSAFFRVAVEGHQDTLYAHSLRQLYRD 321
Query: 1183 CVVSGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNC 1347
C V+GT+DF+FGN V Q L+ T Q SVTA GR DPN +G C
Sbjct: 322 CRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPNQNTGFSFHGC 486
Score = 109 bits (233), Expect(2) = 1e-025
Identities = 54/114 (47%), Positives = 57/114 (50%)
Frame = -1 / -1
Query: 1346 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVMMRQFWNTAAELPKMKSMVPETTQLRKNC 1167
Q W P F LGS RPCAVT W V R T LPK KS VP T Q R +C
Sbjct: 485 QPWKEKPVFWLGSFRPCAVTLPVWPGASGSVATRLRCTTTMPLPKTKSTVPATRQSR*SC 306
Query: 1166 RRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDAST 1005
R C YSVSW S A RS TRSATAWC + PAV N NP +T
Sbjct: 305 RSECAYSVSWCPSTATRKKAERSESTRSATAWCAAGPAVFLNVRSRATNPAPAT 144
Score = 54.2 bits (112), Expect(2) = 7e-040
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 1387 KIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPW 1491
K P+YLGRPWK FSR+V+MES + ++ G++ W
Sbjct: 499 KYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 603
Score = 29.9 bits (59), Expect(2) = 1e-025
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3 / -3
Query: 1491 PGHVPLWLDEVGDGALHDDEARELLPGAAQVR 1396
P P L+ LH D+ RE LP AAQVR
Sbjct: 603 PLEPPAGLNSRAQVGLHHDDPREGLPRAAQVR 508
>gb|BG356421.1|BG356421 EM1_22_D02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 530
Score = 166 bits (358), Expect = 8e-040
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +1 / +3
Query: 1408 RPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGF 1587
RPWKE++R V+MESTI D ++PEG+ W GD LKTL YAEY N GPGAGTSKRVNWPG+
Sbjct: 3 RPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLXYAEYANTGPGAGTSKRVNWPGY 182
Query: 1588 HVIGRKEAEPFTAGPFIDGAMWLKYTGAPHILGF 1689
VIG+ EA FTAG FIDG WL+ TG P+++GF
Sbjct: 183 RVIGQAEATHFTAGVFIDGMTWLQSTGTPNVMGF 284
Score = 116 bits (248), Expect = 1e-024
Identities = 57/95 (60%), Positives = 63/95 (66%)
Frame = -1 / -2
Query: 1691 LKPSMCGAPVYLSHMAPSMNGPAVNGSASFRPMTWKPGQLTLLLVPAPGPRLLYSA**SV 1512
+KP G PV SH+ PSM PAV AS PMT PGQLTLLLVPAPGP L YSA *SV
Sbjct: 286 VKPMTFGVPVLWSHVMPSMKTPAVKCVASACPMTR*PGQLTLLLVPAPGPVLAYSAX*SV 107
Query: 1511 LRAKSPFQGMYPSGLTKSAMVLSMMTRRENSFQGR 1407
LR +SP +PSGL +S MVLS+ T SF GR
Sbjct: 106 LRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGR 2
>gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_13_D02_A002 3', mRNA sequence
Length = 689
Score = 151 bits (324), Expect(2) = 1e-039
Identities = 56/120 (46%), Positives = 75/120 (62%)
Frame = +1 / +3
Query: 1237 QNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPW 1416
Q C + R+P+ NQ N TA GR DPN +G+ I C++ L +YLGRPW
Sbjct: 6 QGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPW 185
Query: 1417 KEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVI 1596
K++SR V ++S + + P G++ W+G+FAL TLYY EY N GPGAGTS RV W G+ VI
Sbjct: 186 KQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVI 365
Score = 35.0 bits (70), Expect(2) = 1e-039
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / +3
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILG 1686
EA FT G FIDG +WL T P G
Sbjct: 378 EASAFTVGSFIDGDVWLAGTSIPFTTG 458
>gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112o08, DNA
sequence
Length = 593
Score = 99.6 bits (211), Expect(3) = 6e-039
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +1 / -2
Query: 1399 YLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNW 1578
YLGRPWKE++R + + + V+PEG++PW GDFAL+TLYY E+++RGPGA + RV W
Sbjct: 247 YLGRPWKEYARTLYVSCYLGTVVRPEGWLPWRGDFALRTLYYGEFDSRGPGANNTARVEW 68
Score = 73.0 bits (153), Expect(3) = 6e-039
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1 / -2
Query: 1138 QDTLYVHARRQFFRNCVVSGTIDFIFGNSAAVFQNCLIIT 1257
QDTLY H RQF+R C ++GT+DFIFGN+AAVF+ C+I T
Sbjct: 532 QDTLYAHTMRQFYRRCHITGTVDFIFGNAAAVFEECVIKT 413
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / -2
Query: 1279 QNSVTAHGRTDPNMKSGLVIQNC 1347
+N V A GR DP +G V NC
Sbjct: 379 RNVVAASGRIDPGQTTGFVFVNC 311
>gb|CW152394.1|CW152394 104_553_11144468_116_36324_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144468, DNA
sequence
Length = 401
Score = 157 bits (338), Expect(2) = 8e-039
Identities = 62/116 (53%), Positives = 79/116 (68%)
Frame = +1 / -3
Query: 1024 ICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTI 1203
+ NM F NTAG +HQAVA R DL+A+Y C F+A+QDTLY H+ RQF+R C V GT+
Sbjct: 399 VAMNMTFRNTAGPAKHQAVAFRSGADLSAYYGCSFEAYQDTLYTHSLRQFYRGCDVYGTV 220
Query: 1204 DFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
D++FGN+A VFQ C +R PM Q N+VTA GR+DPN +G IQ LV +L
Sbjct: 219 DYVFGNAAVVFQGCTFYSRLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLVAAPEL 52
Score = 87.7 bits (185), Expect(2) = 5e-022
Identities = 41/72 (56%), Positives = 45/72 (62%)
Frame = -1 / +2
Query: 1244 QFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCR 1065
Q W T A LP S VP T+Q R NCRR C YSVSW AS Q * A RS R+ATAWC
Sbjct: 179 QPWKTTAALPNT*STVP*TSQPR*NCRRECVYSVSWYASKLQP*YADRSAPERNATAWCF 358
Query: 1064 SAPAVLWNPMFL 1029
+ PAV N MF+
Sbjct: 359 AGPAVFRNVMFI 394
Score = 39.6 bits (80), Expect(2) = 5e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 1361 SGTRRQFWMTSPDFMLGSVRPCAVT 1287
+ TR + WM P F LGS+RPCAVT
Sbjct: 62 AATREEPWMEVPVFWLGSLRPCAVT 136
Score = 25.8 bits (50), Expect(2) = 8e-039
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1384 FKIPSYLGRPWK 1419
F SYLGRPWK
Sbjct: 36 FATLSYLGRPWK 1
>gb|CW152395.1|CW152395 104_553_11144468_148_36328_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144468, DNA
sequence
Length = 401
Score = 157 bits (338), Expect(2) = 8e-039
Identities = 62/116 (53%), Positives = 79/116 (68%)
Frame = +1 / +1
Query: 1024 ICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVVSGTI 1203
+ NM F NTAG +HQAVA R DL+A+Y C F+A+QDTLY H+ RQF+R C V GT+
Sbjct: 1 VAMNMTFRNTAGPAKHQAVAFRSGADLSAYYGCSFEAYQDTLYTHSLRQFYRGCDVYGTV 180
Query: 1204 DFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
D++FGN+A VFQ C +R PM Q N+VTA GR+DPN +G IQ LV +L
Sbjct: 181 DYVFGNAAVVFQGCTFYSRLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLVAAPEL 348
Score = 87.7 bits (185), Expect(2) = 5e-022
Identities = 41/72 (56%), Positives = 45/72 (62%)
Frame = -1 / -1
Query: 1244 QFWNTAAELPKMKSMVPETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCR 1065
Q W T A LP S VP T+Q R NCRR C YSVSW AS Q * A RS R+ATAWC
Sbjct: 221 QPWKTTAALPNT*STVP*TSQPR*NCRRECVYSVSWYASKLQP*YADRSAPERNATAWCF 42
Query: 1064 SAPAVLWNPMFL 1029
+ PAV N MF+
Sbjct: 41 AGPAVFRNVMFI 6
Score = 39.6 bits (80), Expect(2) = 5e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / -1
Query: 1361 SGTRRQFWMTSPDFMLGSVRPCAVT 1287
+ TR + WM P F LGS+RPCAVT
Sbjct: 338 AATREEPWMEVPVFWLGSLRPCAVT 264
Score = 25.8 bits (50), Expect(2) = 8e-039
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 1384 FKIPSYLGRPWK 1419
F SYLGRPWK
Sbjct: 364 FATLSYLGRPWK 399
>gb|CW143842.1|CW143842 104_535_11137628_148_34959_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137628, DNA
sequence
Length = 570
Score = 161 bits (346), Expect = 4e-038
Identities = 73/161 (45%), Positives = 94/161 (58%)
Frame = +1 / -2
Query: 655 RRRLLSSEQDEKGWPVWMRSPERKLLASGNQPKPNAIVAKDGSGQFKSIQQAVDAVPKGH 834
RR L W + RK+ KP+ VAKDGSG F++I A+ VP
Sbjct: 485 RRLLADHAGGVPSWMPDAKRRLRKVSPGDKGFKPDVTVAKDGSGDFRTINAALAKVPVKS 306
Query: 835 QGRYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFSVEA 1014
YV+YVKAG Y E V VP++ N+ M GDG ++ +TG KSF ITT TAT
Sbjct: 305 AATYVMYVKAGTYREYVSVPRNVTNLVMVGDGATKTVITGDKSFMMNITTKDTATMEALG 126
Query: 1015 SGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAF 1137
+GF+ + +G NTAGA+ HQAVALRVQ D++AFY CRFD +
Sbjct: 125 NGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGY 3
Score = 116 bits (249), Expect = 8e-025
Identities = 66/141 (46%), Positives = 77/141 (54%)
Frame = -1 / +1
Query: 1139 WNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQMNPDASTEKVAVFMVVMPSAKL 960
W SNR *NA S CTRSATAW APAV P+ NP S VAV +VVM KL
Sbjct: 1 WYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNPFPSASIVAVSLVVMFIMKL 180
Query: 959 LRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYLP*WPLGTASTACWMLLNCPL 780
L PV + + PSP + GT T S PAFT MTY+ GT ++A M+L PL
Sbjct: 181 LSPVITVLVAPSPTITRFVTFRGTDTYSLYVPAFTYMTYVAALFTGTLASAALMVLKSPL 360
Query: 779 PSLATIAFGLGWLPDASSFLS 717
PSLAT+ GL L +F S
Sbjct: 361 PSLATVTSGLKPLSPGETFRS 423
>gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H09_A002 3', mRNA sequence
Length = 647
Score = 146 bits (313), Expect(2) = 4e-038
Identities = 54/116 (46%), Positives = 73/116 (62%)
Frame = +1 / +2
Query: 1249 IITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFS 1428
+ R+P+ NQ N TA GR DPN +G+ I C++ L +YLGRPWK++S
Sbjct: 5 LYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYS 184
Query: 1429 RLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVI 1596
R V ++S + + P G++ W+G+FAL TLYY EY N GPGAGTS RV W G+ VI
Sbjct: 185 RTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVI 352
Score = 35.0 bits (70), Expect(2) = 4e-038
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / +2
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILG 1686
EA FT G FIDG +WL T P G
Sbjct: 365 EASAFTVGSFIDGDVWLAGTSIPFTTG 445
>gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_11_H04_A012 3', mRNA sequence
Length = 635
Score = 146 bits (313), Expect(2) = 4e-038
Identities = 54/116 (46%), Positives = 73/116 (62%)
Frame = +1 / +1
Query: 1249 IITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFS 1428
+ R+P+ NQ N TA GR DPN +G+ I C++ L +YLGRPWK++S
Sbjct: 1 LYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYS 180
Query: 1429 RLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTSKRVNWPGFHVI 1596
R V ++S + + P G++ W+G+FAL TLYY EY N GPGAGTS RV W G+ VI
Sbjct: 181 RTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVI 348
Score = 35.0 bits (70), Expect(2) = 4e-038
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / +1
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILG 1686
EA FT G FIDG +WL T P G
Sbjct: 361 EASAFTVGSFIDGDVWLAGTSIPFTTG 441
>gb|CW171322.1|CW171322 104_582_11155677_116_36529_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155677, DNA
sequence
Length = 669
Score = 106 bits (226), Expect(2) = 5e-038
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1 / +3
Query: 1006 VEASGFICKNMGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNC 1185
V+ GFI +GF NTAGA +HQAVAL VQ D + F NCR DA+QDTLY H++ QF+ +C
Sbjct: 468 VQGDGFIAIALGFRNTAGAAKHQAVALLVQSDRSIFLNCRMDAYQDTLYAHSKAQFYPHC 647
Query: 1186 VVSGTID 1206
V+SGTID
Sbjct: 648 VISGTID 668
Score = 87.7 bits (185), Expect(2) = 9e-025
Identities = 39/67 (58%), Positives = 41/67 (61%)
Frame = -1 / -3
Query: 1205 SMVPETTQLRKNCRRACTYSVSWNASNRQL*NAARSPCTRSATAWCRSAPAVLWNPMFLQ 1026
SMVPE TQ NC C YSVSW AS RQL S CT SATAWC +APAV NP +
Sbjct: 667 SMVPEMTQCG*NCALECAYSVSWYASMRQLRKMDLSDCTSSATAWCFAAPAVFRNPSAMA 488
Query: 1025 MNPDAST 1005
MNP T
Sbjct: 487 MNPSPCT 467
Score = 78.0 bits (164), Expect(2) = 5e-038
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +1 / +3
Query: 841 RYVIYVKAGLYDEIVMVPKDKVNIFMYGDGPKQSRVTGRKSFADGITTMKTATFS 1005
RY+IYVK G+Y E V + + N+ MYGDG ++ +TG ++FADG+TT KTATFS
Sbjct: 174 RYLIYVKQGVYQEYVTITRAMENVTMYGDGAMKTVITGSRNFADGLTTYKTATFS 338
Score = 52.4 bits (108), Expect(2) = 9e-025
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -1 / -3
Query: 1001 KVAVFMVVMPSAKLLRPVTRLCLGPSPYMKMLTLSLGTMTISS*RPAFT*MTYL 840
KVAV VV PSAK PV + + PSPYM +++L +T S P FT*+ YL
Sbjct: 334 KVAVL*VVRPSAKFRLPVMTVFMAPSPYMVTFSIALVMVTYSWYTPCFT*IRYL 173
>gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_H09_A002 3', mRNA sequence
Length = 491
Score = 131 bits (281), Expect(3) = 8e-038
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = +1 / +1
Query: 1384 FKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYNNRGPGAGTS 1563
F SYLGRPWK FSR V+MES + V P G+MPW+GDFAL TL YAEYNN GPGA TS
Sbjct: 130 FATLSYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTL*YAEYNNSGPGADTS 309
Query: 1564 KRVNWPGFHVIG 1599
+RV WPGFHV+G
Sbjct: 310 RRVAWPGFHVLG 345
Score = 43.2 bits (88), Expect(3) = 8e-038
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1 / +1
Query: 1258 RRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKL 1371
R PM Q N+VTA GR+DPN +G IQ LV +L
Sbjct: 1 RLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLVAAPEL 114
Score = 23.5 bits (45), Expect(3) = 8e-038
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1 / +1
Query: 1606 EAEPFTAGPFIDGAMWLKYTGAPHILG 1686
+A FT + G WL TG P G
Sbjct: 355 DAGNFTVTSMVLGENWLPQTGVPFTSG 435
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,962,408,767
Number of Sequences: 832831
Number of extensions: 29694880
Number of successful extensions: 366023
Number of sequences better than 1.0e-020: 139
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 69556483022
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)