TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3848982.2.1
(697 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sor... 177 1e-077
gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorgh... 100 7e-074
gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sor... 141 5e-067
gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorgh... 100 2e-062
gb|CW241491.1|CW241491 104_700_11218800_116_37544_086 Sorgh... 100 1e-059
gb|BG049025.1|BG049025 OV1_22_C07.g1_A002 Ovary 1 (OV1) Sor... 121 9e-058
gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adap... 100 9e-055
gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sor... 147 7e-053
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 150 9e-052
gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stres... 168 1e-051
gb|BG048752.1|BG048752 OV1_22_E11.b1_A002 Ovary 1 (OV1) Sor... 177 4e-050
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 141 9e-049
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 98 2e-048
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 96 4e-048
gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorgh... 101 3e-046
gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1... 135 1e-045
gb|CW233769.1|CW233769 104_687_11213622_148_37379_027 Sorgh... 98 9e-044
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 139 1e-043
gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation... 128 1e-043
gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation... 103 2e-043
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 141 4e-043
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 141 4e-043
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 141 4e-043
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 138 3e-042
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 141 3e-042
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 132 2e-041
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 132 2e-041
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 132 2e-041
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 131 4e-041
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 132 6e-041
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 130 8e-041
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 130 8e-041
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 130 8e-041
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 141 5e-040
gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-defici... 116 7e-040
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 125 2e-039
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 129 6e-039
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 129 6e-039
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 129 6e-039
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 126 1e-038
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 141 4e-038
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 110 4e-038
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 125 8e-038
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 103 1e-037
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 122 1e-037
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 122 1e-037
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 132 2e-037
gb|BG047628.1|BG047628 OV1_26_C01.b1_A002 Ovary 1 (OV1) Sor... 99 2e-037
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 102 3e-037
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 101 4e-037
gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorgh... 103 7e-037
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 105 2e-036
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 105 2e-036
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 104 3e-036
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 127 5e-036
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 127 5e-036
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 127 5e-036
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 127 5e-036
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 127 5e-036
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 127 5e-036
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 151 8e-036
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 151 1e-035
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 112 1e-035
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 127 2e-035
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 96 2e-035
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 96 2e-035
gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1... 101 2e-035
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 96 2e-035
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 127 3e-035
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 149 4e-035
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 111 4e-034
gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seed... 94 5e-034
gb|CW333675.1|CW333675 104_831_11482081_148_36044_001 Sorgh... 74 6e-033
gb|CW280308.1|CW280308 104_755_11407550_148_35446_055 Sorgh... 74 6e-033
gb|CW268308.1|CW268308 104_739_11401215_116_35306_064 Sorgh... 79 1e-032
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 126 1e-032
gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/c... 116 1e-032
gb|CN123868.1|CN123868 RHOH1_1_F04.b1_A002 Acid- and alkali... 93 1e-032
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 84 1e-032
gb|CX616323.1|CX616323 GABR1_27_F04.b1_A002 GA- or brassino... 114 4e-032
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 139 4e-032
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 89 5e-032
gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots S... 114 1e-031
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 62 1e-031
gb|CF486514.1|CF486514 POL1_38_D08.b1_A002 Pollen Sorghum b... 62 3e-031
gb|CF489097.1|CF489097 POL1_54_H09.b1_A002 Pollen Sorghum b... 62 3e-031
gb|CF489352.1|CF489352 POL1_57_C07.b1_A002 Pollen Sorghum b... 62 3e-031
gb|CF483197.1|CF483197 POL1_12_H10.b1_A002 Pollen Sorghum b... 62 3e-031
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 101 4e-031
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 101 4e-031
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 61 6e-031
gb|CF484704.1|CF484704 POL1_27_A11.b1_A002 Pollen Sorghum b... 62 1e-030
gb|CF488299.1|CF488299 POL1_49_A10.b1_A002 Pollen Sorghum b... 62 4e-030
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 97 9e-030
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 131 1e-029
gb|CF483193.1|CF483193 POL1_12_H04.b1_A002 Pollen Sorghum b... 76 3e-029
gb|CD223154.1|CD223154 CCC1_26_F12.b1_A007 Callus culture/c... 104 3e-029
gb|CW399257.1|CW399257 fsbb001f089a13f0 Sorghum methylation... 129 5e-029
gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stres... 129 5e-029
gb|CN134318.1|CN134318 OX1_25_D04.g1_A002 Oxidatively-stres... 129 5e-029
gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots S... 129 5e-029
gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassino... 129 5e-029
gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassino... 129 5e-029
gb|CF484108.1|CF484108 POL1_3_E05.b1_A002 Pollen Sorghum bi... 62 5e-029
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 74 6e-029
gb|CW396909.1|CW396909 fsbb001f085j02k0 Sorghum methylation... 82 8e-029
gb|CN149549.1|CN149549 WOUND1_63_A11.g1_A002 Wounded leaves... 128 9e-029
gb|CF487513.1|CF487513 POL1_44_F08.b1_A002 Pollen Sorghum b... 62 9e-029
gb|CN134481.1|CN134481 OX1_26_D04.g1_A002 Oxidatively-stres... 127 1e-028
gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots ... 127 1e-028
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 89 2e-028
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 127 2e-028
gb|CW437579.1|CW437579 fsbb001f154m08f0 Sorghum methylation... 127 2e-028
gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1)... 127 2e-028
gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkal... 127 2e-028
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 127 2e-028
gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassino... 127 2e-028
gb|CN149473.1|CN149473 WOUND1_63_A11.b1_A002 Wounded leaves... 101 2e-028
gb|CF482202.1|CF482202 POL1_5_B11.g1_A002 Pollen Sorghum bi... 70 3e-028
gb|CF485397.1|CF485397 POL1_31_F11.b1_A002 Pollen Sorghum b... 73 3e-028
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 86 4e-028
gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation... 67 4e-028
gb|CF485229.1|CF485229 POL1_30_E09.b1_A002 Pollen Sorghum b... 61 4e-028
gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots S... 126 4e-028
gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots ... 126 4e-028
gb|CF487484.1|CF487484 POL1_44_C08.b1_A002 Pollen Sorghum b... 61 6e-028
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 87 7e-028
gb|CF489893.1|CF489893 POL1_61_F05.b1_A002 Pollen Sorghum b... 73 1e-027
gb|BG050942.1|BG050942 FM1_54_C04.b1_A003 Floral-Induced Me... 110 2e-027
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 74 2e-027
gb|CF483416.1|CF483416 POL1_22_D07.b1_A002 Pollen Sorghum b... 62 2e-027
gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkal... 123 2e-027
gb|CF483683.1|CF483683 POL1_24_B02.b1_A002 Pollen Sorghum b... 61 3e-027
gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkal... 123 3e-027
gb|CW300425.1|CW300425 104_783_11463650_148_36247_001 Sorgh... 98 3e-027
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 88 3e-027
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 88 3e-027
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 88 3e-027
gb|CF480166.1|CF480166 POL1_64_D03.b1_A002 Pollen Sorghum b... 61 4e-027
gb|CD463889.1|CD463889 ETH1_47_B11.b1_A002 Ethylene-treated... 97 5e-027
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 85 5e-027
gb|CF487622.1|CF487622 POL1_44_H12.g1_A002 Pollen Sorghum b... 62 5e-027
gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorgh... 63 5e-027
gb|CW041615.1|CW041615 104_275_10506649_114_30284 Sorghum m... 82 6e-027
gb|CF480333.1|CF480333 POL1_65_D03.b1_A002 Pollen Sorghum b... 58 7e-027
gb|CW300424.1|CW300424 104_783_11463650_116_36248_001 Sorgh... 122 8e-027
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 87 9e-027
gb|CF480745.1|CF480745 POL1_67_D07.g1_A002 Pollen Sorghum b... 59 1e-026
gb|CD226829.1|CD226829 CCC1_48_E12.b1_A007 Callus culture/c... 74 1e-026
gb|CW038650.1|CW038650 104_271_10505052_114_30387 Sorghum m... 96 1e-026
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 110 2e-026
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 110 2e-026
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 82 2e-026
gb|CW480555.1|CW480555 fsbb001f239k22f0 Sorghum methylation... 72 2e-026
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 120 3e-026
gb|CF481642.1|CF481642 POL1_73_D12.b1_A002 Pollen Sorghum b... 71 3e-026
gb|CN146372.1|CN146372 WOUND1_39_H03.g1_A002 Wounded leaves... 119 4e-026
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 84 4e-026
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 84 4e-026
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 84 4e-026
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 84 4e-026
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 84 4e-026
gb|BG048321.1|BG048321 OV1_16_G02.g1_A002 Ovary 1 (OV1) Sor... 94 6e-026
gb|CF481823.1|CF481823 POL1_74_H05.b1_A002 Pollen Sorghum b... 74 6e-026
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 88 1e-025
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 79 2e-025
gb|CW335482.1|CW335482 104_834_11483062_116_36083_089 Sorgh... 105 3e-025
gb|CD227127.1|CD227127 CCC1_4_A10.b1_A007 Callus culture/ce... 91 3e-025
gb|CF488022.1|CF488022 POL1_47_G06.b1_A002 Pollen Sorghum b... 56 3e-025
gb|CN133273.1|CN133273 OX1_11_E08.b1_A002 Oxidatively-stres... 84 4e-025
gb|CW417495.1|CW417495 fsbb001f120i17f0 Sorghum methylation... 64 4e-025
gb|CW428522.1|CW428522 fsbb001f141e10k0 Sorghum methylation... 64 4e-025
gb|CX607987.1|CX607987 ANR1_32_A06.b1_A002 Anaerobic roots ... 64 4e-025
gb|CW140343.1|CW140343 104_530_11135731_148_34916_066 Sorgh... 64 4e-025
gb|CW089886.1|CW089886 104_435_10948967_116_32598_088 Sorgh... 83 5e-025
gb|CW323837.1|CW323837 104_818_11476843_116_35904_078 Sorgh... 79 6e-025
gb|CD428756.1|CD428756 ETH1_36_H11.b1_A002 Ethylene-treated... 74 7e-025
gb|BG159424.1|BG159424 OV2_7_F12.g1_A002 Ovary 2 (OV2) Sorg... 90 1e-024
gb|CF489366.1|CF489366 POL1_57_D11.b1_A002 Pollen Sorghum b... 70 1e-024
gb|CF487995.1|CF487995 POL1_47_D10.b1_A002 Pollen Sorghum b... 56 1e-024
gb|CD223643.1|CD223643 CCC1_29_B07.b1_A007 Callus culture/c... 89 1e-024
gb|CD227727.1|CD227727 CCC1_53_C01.b1_A007 Callus culture/c... 90 1e-024
gb|CF489991.1|CF489991 POL1_61_G05.g1_A002 Pollen Sorghum b... 59 3e-024
gb|CF489415.1|CF489415 POL1_57_A10.g1_A002 Pollen Sorghum b... 73 3e-024
gb|CW147025.1|CW147025 104_540_11139300_116_34999_046 Sorgh... 73 3e-024
gb|CF483493.1|CF483493 POL1_22_D09.g1_A002 Pollen Sorghum b... 73 3e-024
gb|CF489634.1|CF489634 POL1_58_F03.g1_A002 Pollen Sorghum b... 73 5e-024
gb|CF489646.1|CF489646 POL1_58_G05.g1_A002 Pollen Sorghum b... 73 5e-024
gb|BE357900.1|BE357900 DG1_23_H03.b1_A002 Dark Grown 1 (DG1... 71 5e-024
gb|CD223263.1|CD223263 CCC1_27_E07.b1_A007 Callus culture/c... 87 5e-024
gb|BF657412.1|BF657412 OV2_24_G10.g1_A002 Ovary 2 (OV2) Sor... 87 5e-024
gb|CF487381.1|CF487381 POL1_43_A12.g1_A002 Pollen Sorghum b... 73 9e-024
gb|CD221690.1|CD221690 CCC1_70_E10.b1_A007 Callus culture/c... 86 1e-023
gb|CD222137.1|CD222137 CCC1_2_B01.b1_A007 Callus culture/ce... 86 1e-023
gb|CF487538.1|CF487538 POL1_44_H12.b1_A002 Pollen Sorghum b... 53 1e-023
gb|CD219585.1|CD219585 CCC1_57_C04.g1_A007 Callus culture/c... 111 2e-023
gb|CW430464.1|CW430464 fsbb001f144d01f0 Sorghum methylation... 67 2e-023
gb|CD227112.1|CD227112 CCC1_4_D07.b1_A007 Callus culture/ce... 85 2e-023
gb|CD225932.1|CD225932 CCC1_42_G10.b1_A007 Callus culture/c... 85 2e-023
gb|CF480054.1|CF480054 POL1_63_A12.g1_A002 Pollen Sorghum b... 59 2e-023
gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorgh... 110 3e-023
gb|CF483417.1|CF483417 POL1_22_D08.b1_A002 Pollen Sorghum b... 73 3e-023
gb|CD233638.1|CD233638 SS1_3_G02.b1_A012 Salt-stressed seed... 74 4e-023
gb|CF480255.1|CF480255 POL1_64_D10.g1_A002 Pollen Sorghum b... 68 6e-023
gb|CD228001.1|CD228001 CCC1_5_B06.b1_A007 Callus culture/ce... 85 6e-023
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 74 6e-023
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 74 6e-023
gb|CD221661.1|CD221661 CCC1_70_E11.b1_A007 Callus culture/c... 72 6e-023
gb|CF488469.1|CF488469 POL1_50_E04.b1_A002 Pollen Sorghum b... 53 8e-023
gb|CF487380.1|CF487380 POL1_43_A11.g1_A002 Pollen Sorghum b... 69 8e-023
gb|CD225094.1|CD225094 CCC1_38_F05.b1_A007 Callus culture/c... 85 8e-023
gb|CF483102.1|CF483102 POL1_11_F12.b1_A002 Pollen Sorghum b... 74 1e-022
gb|CF482434.1|CF482434 POL1_7_A01.b1_A002 Pollen Sorghum bi... 53 1e-022
gb|CW333674.1|CW333674 104_831_11482081_116_36043_001 Sorgh... 74 1e-022
gb|CW134146.1|CW134146 104_518_11117151_116_34820_060 Sorgh... 107 1e-022
gb|CF482205.1|CF482205 POL1_5_C03.g1_A002 Pollen Sorghum bi... 59 2e-022
gb|CW417496.1|CW417496 fsbb001f120i17k0 Sorghum methylation... 64 2e-022
gb|CF489840.1|CF489840 POL1_59_H12.g1_A002 Pollen Sorghum b... 68 2e-022
gb|CF489774.1|CF489774 POL1_59_C03.g1_A002 Pollen Sorghum b... 68 2e-022
gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1... 102 3e-022
gb|CF489450.1|CF489450 POL1_57_D11.g1_A002 Pollen Sorghum b... 64 5e-022
gb|CX610279.1|CX610279 ANR1_17_E04.g1_A002 Anaerobic roots ... 105 1e-021
gb|CW333019.1|CW333019 104_830_11481720_116_36037_082 Sorgh... 62 2e-021
gb|CN126050.1|CN126050 RHOH1_14_H04.g1_A002 Acid- and alkal... 83 2e-021
gb|CW186182.1|CW186182 104_604_11166433_116_36705_013 Sorgh... 101 9e-021
gb|CD430578.1|CD430578 ETH1_19_F11.g1_A002 Ethylene-treated... 101 9e-021
>gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 177 bits (380), Expect(3) = 1e-077
Identities = 72/85 (84%), Positives = 76/85 (89%)
Frame = +3 / +1
Query: 36 QVEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANY 215
Q EPVHFDLSGTAFGAMAKPGQADQLRN GRL VQY RV CNWNG+D+AFRVDAGSNANY
Sbjct: 37 QSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANY 216
Query: 216 LAMAIEYESGDGDLRAXELKQSGAA 290
LAMAIEYE+GDGDLRA EL+ AA
Sbjct: 217 LAMAIEYEAGDGDLRAVELQNGAAA 291
Score = 141 bits (302), Expect(3) = 1e-067
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = -1 / -1
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKC 50
MAMAR*LAFEPASTLKA S PFQLH TR+YWT RRP FRSWSAWPGFAMAPNAVPLRSK
Sbjct: 230 MAMAR*LAFEPASTLKATSTPFQLHGTRVYWTGRRPTFRSWSAWPGFAMAPNAVPLRSKW 51
Query: 49 TGSTW 35
TGS W
Sbjct: 50 TGSDW 36
Score = 100 bits (213), Expect(2) = 8e-041
Identities = 47/72 (65%), Positives = 51/72 (70%)
Frame = -3 / -3
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHPNVLDLQAAGVPELVGLAGLRHGTERRPA 63
GLVLD HPEG V AVPVARHP+VLD +AA V ELVGLAG RHGTERRPA
Sbjct: 243 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSELVGLAGFRHGTERRPA 64
Query: 62 QVKVHGLHLAAA 27
+V+V GL LA A
Sbjct: 63 EVEVDGLGLARA 28
Score = 100 bits (212), Expect(3) = 1e-067
Identities = 41/47 (87%), Positives = 42/47 (89%)
Frame = -1 / -1
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPD 338
FPPKLTTER*VLPGCHPAGMT LATR LPEPEVRRTDRGA +EPD
Sbjct: 479 FPPKLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRGAACRLEPD 339
Score = 93.2 bits (197), Expect(3) = 1e-077
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / +1
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRLTSGSG+ LVAS VIPAGWQPG TYRSVVNFGGN
Sbjct: 340 SGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNFGGN 480
Score = 88.1 bits (186), Expect(2) = 8e-041
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = -3 / -3
Query: 479 VSSEVDDGAVGSAGLPSGGDDVAGDEDPAGARGEADRQGGLQIGGAGLVLP 327
VSSEVDDGAVG AGLPSGGDD AGDE AGA GEADRQGG GAG ++P
Sbjct: 480 VSSEVDDGAVGVAGLPSGGDDAAGDEGLAGAGGEADRQGGRLQTGAGRLVP 328
Score = 60.6 bits (126), Expect(3) = 1e-077
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / +1
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 274 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 360
Score = 55.6 bits (115), Expect(3) = 1e-067
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D Y HTAPQER MGAHAAAP C
Sbjct: 359 ACRLEPDDWYRHTAPQERSMGAHAAAPFC 273
>gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218800, DNA
sequence
Length = 644
Score = 100 bits (212), Expect(4) = 7e-074
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3 / -2
Query: 141 YIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAA 290
+ RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA EL+ AA
Sbjct: 373 HCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVELQNGAAA 224
Score = 100 bits (212), Expect(4) = 5e-063
Identities = 41/47 (87%), Positives = 42/47 (89%)
Frame = -1 / +3
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPD 338
FPPKLTTER*VLPGCHPAGMT LATR LPEPEVRRTDRGA +EPD
Sbjct: 36 FPPKLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRGAACRLEPD 176
Score = 93.2 bits (197), Expect(4) = 7e-074
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / -2
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRLTSGSG+ LVAS VIPAGWQPG TYRSVVNFGGN
Sbjct: 175 SGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNFGGN 35
Score = 89.5 bits (189), Expect(4) = 5e-063
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -1 / +2
Query: 148 RMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKCTGSTW 35
R+YWT RRP FRSWSAWPGFAMAPNAVPLRSK TGS W
Sbjct: 482 RVYWTGRRPTFRSWSAWPGFAMAPNAVPLRSKWTGSDW 595
Score = 88.1 bits (186), Expect(3) = 2e-037
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = -3 / +2
Query: 479 VSSEVDDGAVGSAGLPSGGDDVAGDEDPAGARGEADRQGGLQIGGAGLVLP 327
VSSEVDDGAVG AGLPSGGDD AGDE AGA GEADRQGG GAG ++P
Sbjct: 35 VSSEVDDGAVGVAGLPSGGDDAAGDEGLAGAGGEADRQGGRLQTGAGRLVP 187
Score = 82.6 bits (174), Expect(4) = 7e-074
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3 / -3
Query: 36 QVEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIR 149
Q EPVHFDLSGTAFGAMAKPGQADQLRN GRL VQY R
Sbjct: 594 QSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTR 481
Score = 68.9 bits (144), Expect(3) = 2e-037
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -3 / +1
Query: 149 PNVLDLQAAGVPELVGLAGLRHGTERRPAQVKVHGLHLAAA 27
P+VLD +AA V ELVGLAG RHGTERRPA+V+V GL LA A
Sbjct: 481 PSVLDWEAADVSELVGLAGFRHGTERRPAEVEVDGLGLARA 603
Score = 60.6 bits (126), Expect(4) = 7e-074
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / -2
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 241 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 155
Score = 55.6 bits (115), Expect(4) = 5e-063
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / +3
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D Y HTAPQER MGAHAAAP C
Sbjct: 156 ACRLEPDDWYRHTAPQERSMGAHAAAPFC 242
Score = 54.7 bits (113), Expect(4) = 5e-063
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +3
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHAT 149
MAMAR*LAFEPASTLKA S PFQLH T
Sbjct: 285 MAMAR*LAFEPASTLKATSTPFQLHGT 365
Score = 38.6 bits (78), Expect(3) = 2e-037
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = -3 / +2
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHPNV 141
GLVLD HPEG V AVPVARHP V
Sbjct: 272 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 373
>gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 566
Score = 141 bits (302), Expect(3) = 5e-067
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3 / +3
Query: 84 MAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRA 263
MAKPGQADQLRN GRL VQY RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA
Sbjct: 6 MAKPGQADQLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRA 185
Query: 264 XELKQSGAA 290
EL+ AA
Sbjct: 186 VELQNGAAA 212
Score = 107 bits (229), Expect(3) = 1e-057
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -1 / -2
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHATRMYWTCRRPAFRSWSAWPGFAM 83
MAMAR*LAFEPASTLKA S PFQLH TR+YWT RRP FRSWSAWPGFAM
Sbjct: 151 MAMAR*LAFEPASTLKATSTPFQLHGTRVYWTGRRPTFRSWSAWPGFAM 5
Score = 100 bits (212), Expect(3) = 1e-057
Identities = 41/47 (87%), Positives = 42/47 (89%)
Frame = -1 / -2
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPD 338
FPPKLTTER*VLPGCHPAGMT LATR LPEPEVRRTDRGA +EPD
Sbjct: 400 FPPKLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRGAACRLEPD 260
Score = 93.2 bits (197), Expect(3) = 5e-067
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRLTSGSG+ LVAS VIPAGWQPG TYRSVVNFGGN
Sbjct: 261 SGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNFGGN 401
Score = 88.1 bits (186), Expect(2) = 1e-032
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = -3 / -1
Query: 479 VSSEVDDGAVGSAGLPSGGDDVAGDEDPAGARGEADRQGGLQIGGAGLVLP 327
VSSEVDDGAVG AGLPSGGDD AGDE AGA GEADRQGG GAG ++P
Sbjct: 401 VSSEVDDGAVGVAGLPSGGDDAAGDEGLAGAGGEADRQGGRLQTGAGRLVP 249
Score = 73.0 bits (153), Expect(2) = 1e-032
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -1
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHPNVLDLQAAGVPELVGLAGLRHG 81
GLVLD HPEG V AVPVARHP+VLD +AA V ELVGLAG RHG
Sbjct: 164 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSELVGLAGFRHG 3
Score = 60.6 bits (126), Expect(3) = 5e-067
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / +3
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 195 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 281
Score = 55.6 bits (115), Expect(3) = 1e-057
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / -2
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D Y HTAPQER MGAHAAAP C
Sbjct: 280 ACRLEPDDWYRHTAPQERSMGAHAAAPFC 194
>gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213622, DNA
sequence
Length = 712
Score = 99.6 bits (211), Expect(4) = 2e-062
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3 / -2
Query: 147 RVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAA 290
RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA EL+ AA
Sbjct: 525 RVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVELQNGAAA 382
Score = 94.5 bits (200), Expect(4) = 5e-051
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = -1 / +2
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPD 338
F PKLTT+R*VLPGCHPAGMT LATR LPEPEVRRTDRGA +EPD
Sbjct: 194 FRPKLTTQR*VLPGCHPAGMTPLATRVLPEPEVRRTDRGAACRLEPD 334
Score = 87.2 bits (184), Expect(4) = 2e-062
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = +3 / -2
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRLTSGSG+ LVAS VIPAGWQPG TYR VVNFG N
Sbjct: 333 SGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRCVVNFGRN 193
Score = 83.1 bits (175), Expect(4) = 4e-032
Identities = 38/51 (74%), Positives = 38/51 (74%)
Frame = -3 / +1
Query: 491 SLCMVSSEVDDGAVGSAGLPSGGDDVAGDEDPAGARGEADRQGGLQIGGAG 339
S VSSEVDD AVG AGLPSGGDD AGDE AGA GEADRQGG GAG
Sbjct: 181 SFVSVSSEVDDAAVGVAGLPSGGDDAAGDEGLAGAGGEADRQGGRLQTGAG 333
Score = 60.6 bits (126), Expect(4) = 2e-062
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / -2
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 399 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 313
Score = 59.3 bits (123), Expect(4) = 5e-051
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -1 / +3
Query: 148 RMYWTCRRPAFRSWSAWPGFAMAPN 74
R+YWT RRP FRSW WPGFAMAPN
Sbjct: 636 RVYWTGRRPTFRSWVGWPGFAMAPN 710
Score = 54.7 bits (113), Expect(4) = 5e-051
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +2
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHAT 149
MAMAR*LAFEPASTLKA S PFQLH T
Sbjct: 443 MAMAR*LAFEPASTLKATSTPFQLHGT 523
Score = 50.6 bits (104), Expect(4) = 5e-051
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -1 / +2
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D HTAPQER MGAHAAAP C
Sbjct: 314 ACRLEPDDW*RHTAPQERSMGAHAAAPFC 400
Score = 50.6 bits (104), Expect(4) = 2e-062
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +3 / -1
Query: 72 AFGAMAKPGQADQLRNAGRLQVQYIR 149
AFGAMAKPGQ QLRN GRL VQY R
Sbjct: 712 AFGAMAKPGQPTQLRNVGRLPVQYTR 635
Score = 40.9 bits (83), Expect(4) = 4e-032
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 149 PNVLDLQAAGVPELVGLAGLRHGTER 72
P VLD +AA V EL LAG RHGTER
Sbjct: 635 PGVLDWEAADVSELGRLAGFRHGTER 712
Score = 37.7 bits (76), Expect(4) = 4e-032
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -3 / +1
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHP 147
GLVLD HPEG V AVPVARHP
Sbjct: 430 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHP 525
Score = 33.1 bits (66), Expect(4) = 4e-032
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -3 / +1
Query: 365 GGLQIGGAGLVLPHSAPGALH 303
G LQ G LV PH APGA H
Sbjct: 310 GRLQTGAGRLVAPHRAPGAFH 372
>gb|CW241491.1|CW241491 104_700_11218800_116_37544_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218800, DNA
sequence
Length = 641
Score = 100 bits (212), Expect(4) = 1e-059
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3 / +2
Query: 141 YIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAA 290
+ RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA EL+ AA
Sbjct: 359 HCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVELQNGAAA 508
Score = 89.5 bits (189), Expect(4) = 8e-049
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -1 / -2
Query: 148 RMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKCTGSTW 35
R+YWT RRP FRSWSAWPGFAMAPNAVPLRSK TGS W
Sbjct: 250 RVYWTGRRPTFRSWSAWPGFAMAPNAVPLRSKWTGSDW 137
Score = 82.6 bits (174), Expect(4) = 1e-059
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3 / +3
Query: 36 QVEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIR 149
Q EPVHFDLSGTAFGAMAKPGQADQLRN GRL VQY R
Sbjct: 138 QSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTR 251
Score = 68.9 bits (144), Expect(3) = 1e-025
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -3 / -1
Query: 149 PNVLDLQAAGVPELVGLAGLRHGTERRPAQVKVHGLHLAAA 27
P+VLD +AA V ELVGLAG RHGTERRPA+V+V GL LA A
Sbjct: 251 PSVLDWEAADVSELVGLAGFRHGTERRPAEVEVDGLGLARA 129
Score = 60.6 bits (126), Expect(4) = 1e-059
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / +2
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 491 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 577
Score = 55.6 bits (115), Expect(4) = 8e-049
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / -3
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D Y HTAPQER MGAHAAAP C
Sbjct: 576 ACRLEPDDWYRHTAPQERSMGAHAAAPFC 490
Score = 54.7 bits (113), Expect(4) = 8e-049
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHAT 149
MAMAR*LAFEPASTLKA S PFQLH T
Sbjct: 447 MAMAR*LAFEPASTLKATSTPFQLHGT 367
Score = 51.9 bits (107), Expect(4) = 8e-049
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -1 / -3
Query: 421 MTLLATRTLPEPEVRRTDRGACRLVEPD 338
MT LATR LPEPEVRRTDRGA +EPD
Sbjct: 639 MTPLATRVLPEPEVRRTDRGAACRLEPD 556
Score = 47.8 bits (98), Expect(3) = 1e-025
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3 / -2
Query: 422 DDVAGDEDPAGARGEADRQGGLQIGGAGLVLP 327
DD AGDE AGA GEADRQGG GAG ++P
Sbjct: 640 DDAAGDEGLAGAGGEADRQGGRLQTGAGRLVP 545
Score = 45.1 bits (92), Expect(4) = 1e-059
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +3 / +2
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVI 422
SGS+ APLSVRLTSGSG+ LVAS VI
Sbjct: 557 SGSSLQAAPLSVRLTSGSGKTLVASGVI 640
Score = 38.6 bits (78), Expect(3) = 1e-025
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = -3 / -2
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHPNV 141
GLVLD HPEG V AVPVARHP V
Sbjct: 460 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 359
>gb|BG049025.1|BG049025 OV1_22_C07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 386
Score = 121 bits (258), Expect(3) = 9e-058
Identities = 49/61 (80%), Positives = 53/61 (86%)
Frame = +3 / +1
Query: 108 QLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGA 287
QLRN GRL VQY RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA EL+ A
Sbjct: 1 QLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVELQNGEA 180
Query: 288 A 290
A
Sbjct: 181 A 183
Score = 101 bits (216), Expect(3) = 7e-047
Identities = 43/57 (75%), Positives = 45/57 (78%)
Frame = -1 / -2
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPDLYCHTAPQER 308
FPPKLTTER*VLPGCHPAGMT LATR LPEPEVRRTDRGA +EPD P+ R
Sbjct: 373 FPPKLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRGAACRLEPDTTGTATPRPR 203
Score = 93.2 bits (197), Expect(3) = 9e-058
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRLTSGSG+ LVAS VIPAGWQPG TYRSVVNFGGN
Sbjct: 234 SGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNFGGN 374
Score = 84.9 bits (179), Expect(3) = 2e-028
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = -3 / -1
Query: 479 VSSEVDDGAVGSAGLPSGGDDVAGDEDPAGARGEADRQGGLQIGGAG 339
VSSEVDDGAVG AGLPSGGDD AGDE AGA GEADRQGG GAG
Sbjct: 374 VSSEVDDGAVGVAGLPSGGDDAAGDEGLAGAGGEADRQGGRLQTGAG 234
Score = 81.3 bits (171), Expect(3) = 7e-047
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -1 / -1
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHATRMYWTCRRPAFRS 110
MAMAR*LAFEPASTLKA S PFQLH TR+YWT RRP FRS
Sbjct: 122 MAMAR*LAFEPASTLKATSTPFQLHGTRVYWTGRRPTFRS 3
Score = 53.3 bits (110), Expect(3) = 2e-028
Identities = 26/45 (57%), Positives = 28/45 (62%)
Frame = -3 / -3
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHPNVLDLQAAGVPEL 108
GLVLD HPEG V AVPVARHP+VLD +AA V EL
Sbjct: 135 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSEL 1
Score = 49.6 bits (102), Expect(3) = 9e-058
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 276 QSGAAAWAPMQRSWGAVWQYK 338
Q+G AAWAPM+RSWGAVW+Y+
Sbjct: 166 QNGEAAWAPMERSWGAVWRYQ 228
Score = 44.1 bits (90), Expect(3) = 7e-047
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / -1
Query: 334 YCHTAPQERCMGAHAAAPLC 275
Y HTAPQER MGAHAA+P C
Sbjct: 224 YRHTAPQERSMGAHAASPFC 165
Score = 26.7 bits (52), Expect(3) = 2e-028
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 338 LVLPHSAPGALH 303
LV PH APGALH
Sbjct: 228 LVPPHRAPGALH 193
>gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic32c10 5', DNA sequence
Length = 683
Score = 100 bits (212), Expect(3) = 7e-042
Identities = 41/47 (87%), Positives = 42/47 (89%)
Frame = -1 / -2
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPD 338
FPPKLTTER*VLPGCHPAGMT LATR LPEPEVRRTDRGA +EPD
Sbjct: 391 FPPKLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRGAACRLEPD 251
Score = 100 bits (212), Expect(3) = 9e-055
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3 / +3
Query: 141 YIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAA 290
+ RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA EL+ AA
Sbjct: 54 HCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVELQNGAAA 203
Score = 93.2 bits (197), Expect(3) = 9e-055
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRLTSGSG+ LVAS VIPAGWQPG TYRSVVNFGGN
Sbjct: 252 SGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNFGGN 392
Score = 88.1 bits (186), Expect(2) = 2e-022
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = -3 / -1
Query: 479 VSSEVDDGAVGSAGLPSGGDDVAGDEDPAGARGEADRQGGLQIGGAGLVLP 327
VSSEVDDGAVG AGLPSGGDD AGDE AGA GEADRQGG GAG ++P
Sbjct: 392 VSSEVDDGAVGVAGLPSGGDDAAGDEGLAGAGGEADRQGGRLQTGAGRLVP 240
Score = 60.6 bits (126), Expect(3) = 9e-055
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / +3
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 186 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 272
Score = 55.6 bits (115), Expect(3) = 7e-042
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / -2
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D Y HTAPQER MGAHAAAP C
Sbjct: 271 ACRLEPDDWYRHTAPQERSMGAHAAAPFC 185
Score = 54.7 bits (113), Expect(3) = 7e-042
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -2
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHAT 149
MAMAR*LAFEPASTLKA S PFQLH T
Sbjct: 142 MAMAR*LAFEPASTLKATSTPFQLHGT 62
Score = 38.6 bits (78), Expect(2) = 2e-022
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = -3 / -1
Query: 242 GLVLDXXXXXXXXXXXXHPEGDVQAVPVARHPNV 141
GLVLD HPEG V AVPVARHP V
Sbjct: 155 GLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 54
>gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 547
Score = 147 bits (315), Expect(2) = 7e-053
Identities = 55/75 (73%), Positives = 64/75 (85%)
Frame = +3 / +1
Query: 123 GRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAP 302
G L++QY RV CNWNG+DIAF+VD GSNANYL + IEYESGDG+LR+ EL Q G AAWAP
Sbjct: 7 GLLKIQYTRVPCNWNGMDIAFKVDGGSNANYLPVLIEYESGDGELRSVELMQRGGAAWAP 186
Query: 303 MQRSWGAVWQYKSGS 347
MQRSWGAVW+Y SG+
Sbjct: 187 MQRSWGAVWRYNSGA 231
Score = 96.4 bits (204), Expect(2) = 3e-036
Identities = 38/74 (51%), Positives = 46/74 (62%)
Frame = -1 / -3
Query: 343 PDLYCHTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPF 164
P+LY HTAP +RC+GAHAA P C S++ +* AF+P STL AMS PF
Sbjct: 227 PELYLHTAPHDRCIGAHAAPPRCMSSTDLSSPSPDSYSISTGK*FAFDPPSTLNAMSIPF 48
Query: 163 QLHATRMYWTCRRP 122
QLH TR+YW R P
Sbjct: 47 QLHGTRVYWILRSP 6
Score = 81.7 bits (172), Expect(2) = 7e-053
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP SVRLTSGSGR +VA+NVIPAGW PG TYRSVVNF
Sbjct: 235 LQAPFSVRLTSGSGRTVVATNVIPAGWSPGATYRSVVNF 351
Score = 76.7 bits (161), Expect(2) = 3e-036
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -1 / -3
Query: 469 KLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACR 353
KLTTER V PG HPAGMTL+AT LPEPEVRRT++GACR
Sbjct: 350 KLTTERYVAPGDHPAGMTLVATTVLPEPEVRRTEKGACR 234
>gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 1256
Score = 150 bits (323), Expect(2) = 9e-052
Identities = 56/102 (54%), Positives = 76/102 (74%)
Frame = +3 / -3
Query: 42 EPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLA 221
E HFD+SGT+ GAMAKPG AD++R AG L+VQY RV C ++G++IAFRVD GSN Y
Sbjct: 765 EAAHFDMSGTSMGAMAKPGMADKIRAAGILKVQYKRVPCKYSGVNIAFRVDQGSNPFYFE 586
Query: 222 MAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSGS 347
+ +E+E GDGDL A +L ++G W PM ++WGA+W+Y S +
Sbjct: 585 VLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNT 460
Score = 80.8 bits (170), Expect(2) = 1e-026
Identities = 40/92 (43%), Positives = 46/92 (50%)
Frame = -1 / +2
Query: 328 HTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPFQLHAT 149
H+APQ +G P S + ++* FEP ST AM P LH T
Sbjct: 479 HSAPQFCTIGVQVPQPASIRSTALRSPSPSSNSTSTSK*NGFEPWSTRNAMFTPLYLHGT 658
Query: 148 RMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSK 53
+YWT R PA R SA PGFAMAP VPL SK
Sbjct: 659 LLYWTFRIPAARILSAMPGFAMAPMEVPLMSK 754
Score = 74.4 bits (156), Expect(2) = 9e-052
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / -3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S+RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 450 LKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 334
Score = 60.2 bits (125), Expect(2) = 1e-026
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -1 / +2
Query: 466 LTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGA 359
LT ER V PG PAGMTLLAT TLPE EVRR+++GA
Sbjct: 338 LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGA 445
>gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_44_G12_A002 3', mRNA sequence
Length = 795
Score = 168 bits (361), Expect(2) = 1e-051
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3 / +2
Query: 42 EPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLA 221
E HFD+SGTAFGAMAKPG ADQLR AG LQ+QY RV C W G+D+ F VD+GSN NYLA
Sbjct: 47 EGAHFDMSGTAFGAMAKPGMADQLRAAGLLQIQYTRVQCEWPGVDVTFSVDSGSNPNYLA 226
Query: 222 MAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSGS 347
+ IEYE + DL A ++ Q+ A W PMQ SWGA+W+ SGS
Sbjct: 227 VLIEYEDSESDLSAVDIMQNSAGQWVPMQHSWGAIWRLDSGS 352
Score = 109 bits (233), Expect(2) = 9e-030
Identities = 49/98 (50%), Positives = 54/98 (55%)
Frame = -1 / -1
Query: 346 EPDLYCHTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKP 167
EP+ AP E C+G H A C S++ AR* FEP ST K S P
Sbjct: 351 EPESSLQIAPHECCIGTHCPAEFCMMSTAERSLSLSSYSISTAR*FGFEPESTEKVTSTP 172
Query: 166 FQLHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSK 53
H TR+YW C RPA RS SA PGFAMAPNAVPL SK
Sbjct: 171 GHSHCTRVYWICSRPAARS*SAIPGFAMAPNAVPLMSK 58
Score = 56.5 bits (117), Expect(2) = 1e-051
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRS 458
L P +RLT SGRVL+ASN IPAGW PG YR+
Sbjct: 356 LHGPFHLRLTFSSGRVLIASNAIPAGWTPGVAYRA 460
Score = 41.8 bits (85), Expect(2) = 9e-030
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 442 PGCHPAGMTLLATRTLPEPEVRRTDRG 362
PG HPAGM LLA TLPE VRR G
Sbjct: 444 PGVHPAGMALLAMSTLPELNVRRRWNG 364
>gb|BG048752.1|BG048752 OV1_22_E11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 405
Score = 177 bits (380), Expect(2) = 4e-050
Identities = 72/85 (84%), Positives = 76/85 (89%)
Frame = +3 / +2
Query: 36 QVEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANY 215
Q EPVHFDLSGTAFGAMAKPGQADQLRN GRL VQY RV CNWNG+D+AFRVDAGSNANY
Sbjct: 116 QSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANY 295
Query: 216 LAMAIEYESGDGDLRAXELKQSGAA 290
LAMAIEYE+GDGDLRA EL+ AA
Sbjct: 296 LAMAIEYEAGDGDLRAVELQNGAAA 370
Score = 141 bits (302), Expect(2) = 1e-039
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = -1 / -1
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKC 50
MAMAR*LAFEPASTLKA S PFQLH TR+YWT RRP FRSWSAWPGFAMAPNAVPLRSK
Sbjct: 309 MAMAR*LAFEPASTLKATSTPFQLHGTRVYWTGRRPTFRSWSAWPGFAMAPNAVPLRSKW 130
Query: 49 TGSTW 35
TGS W
Sbjct: 129 TGSDW 115
Score = 43.7 bits (89), Expect(2) = 1e-039
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 328 HTAPQERCMGAHAAAPLC 275
HTAPQER MGAHAAAP C
Sbjct: 405 HTAPQERSMGAHAAAPFC 352
Score = 42.8 bits (87), Expect(2) = 4e-050
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3 / +2
Query: 276 QSGAAAWAPMQRSWGAV 326
Q+GAAAWAPM+RSWGAV
Sbjct: 353 QNGAAAWAPMERSWGAV 403
>gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_F08_A002 3', mRNA sequence
Length = 730
Score = 141 bits (303), Expect(2) = 9e-049
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = +3 / +3
Query: 60 LSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYE 239
+SGT+ GAMAKPG AD+LR AG L+VQY RV C ++G++IAFRVD GSN YL + +E+E
Sbjct: 3 MSGTSMGAMAKPGMADKLRAAGILKVQYKRVPCKYSGVNIAFRVDQGSNPLYLEVLVEFE 182
Query: 240 SGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSGS 347
GDGDL A L ++G W PM ++WGA+W+Y S +
Sbjct: 183 DGDGDLSAVNLMEAGCGTWTPMVQNWGALWRYNSNT 290
Score = 73.5 bits (154), Expect(2) = 9e-049
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 300 LKAPFSFRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 416
Score = 73.0 bits (153), Expect(2) = 5e-023
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 202 EPASTLKAMSKPFQLHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPL 62
EP STLKAM P LH T +YWT R PA RS SA PGFAMAP VPL
Sbjct: 145 EPWSTLKAMFTPLYLHGTLLYWTFRIPAARSLSAMPGFAMAPMEVPL 5
Score = 57.9 bits (120), Expect(2) = 5e-023
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -1 / -1
Query: 463 TTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGA 359
T ER V PG PAGMTLLAT TLPE EVRR ++GA
Sbjct: 409 TRERYVAPGFQPAGMTLLATSTLPESEVRRNEKGA 305
>gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148g13, DNA
sequence
Length = 768
Score = 97.7 bits (207), Expect(3) = 2e-048
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +3 / -2
Query: 147 RVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAV 326
RV C ++G++IAFRVD GSN YL + +E+E GDGDL A +L ++G W PM ++WGA+
Sbjct: 368 RVPCKYSGVNIAFRVDQGSNPFYLEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGAL 189
Query: 327 WQYKSGS 347
W+Y S +
Sbjct: 188 WRYNSNT 168
Score = 74.4 bits (156), Expect(3) = 2e-048
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / -2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S+RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 158 LKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 42
Score = 60.6 bits (126), Expect(3) = 2e-048
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3 / -3
Query: 42 EPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIR 149
E HFD+SGT+ GAMAKPG AD+LR AG L++QY R
Sbjct: 595 EAAHFDMSGTSMGAMAKPGMADRLRAAGILKIQYKR 488
Score = 60.2 bits (125), Expect(3) = 6e-022
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -1 / +1
Query: 466 LTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGA 359
LT ER V PG PAGMTLLAT TLPE EVRR+++GA
Sbjct: 46 LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGA 153
Score = 47.8 bits (98), Expect(3) = 6e-022
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -1 / +3
Query: 145 MYWTCRRPAFRSWSAWPGFAMAPNAVPLRSK 53
+YW R PA RS SA PG AMAP VPL SK
Sbjct: 492 LYWILRMPAARSLSAMPGLAMAPMEVPLMSK 584
Score = 37.7 bits (76), Expect(3) = 6e-022
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -1 / +1
Query: 328 HTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPFQLHAT 149
H+APQ +G P S + ++* EP STLKAM P LH T
Sbjct: 187 HSAPQFCTIGVQVPQPASIRSTALRSPSPSSNSTSTSK*NGLEPWSTLKAMFTPLYLHGT 366
>gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808375, DNA
sequence
Length = 758
Score = 95.9 bits (203), Expect(3) = 4e-048
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +3 / +1
Query: 147 RVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAV 326
RV C ++G++IAFRVD GSN Y + +E+E GDGDL A +L ++G W PM ++WGA+
Sbjct: 283 RVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGAL 462
Query: 327 WQYKSGS 347
W+Y S +
Sbjct: 463 WRYNSNT 483
Score = 74.4 bits (156), Expect(3) = 4e-048
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S+RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 493 LKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 609
Score = 61.1 bits (127), Expect(3) = 4e-048
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3 / +1
Query: 42 EPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIR 149
E HFD+SGT+ GAMAKPG AD+LR AG L+VQY R
Sbjct: 100 EAAHFDMSGTSMGAMAKPGMADKLRAAGILKVQYKR 207
Score = 58.3 bits (121), Expect(3) = 9e-024
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 463 TTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGA 359
T ER V PG PAGMTLLAT TLPE EVRR+++GA
Sbjct: 602 TRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGA 498
Score = 52.8 bits (109), Expect(3) = 9e-024
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = -1 / -1
Query: 160 LHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSK 53
L A +YWT R PA RS SA PGFAMAP VPL SK
Sbjct: 218 LGAYLLYWTFRIPAARSLSAMPGFAMAPMEVPLMSK 111
Score = 37.7 bits (76), Expect(3) = 9e-024
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -1 / -1
Query: 328 HTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPFQLHAT 149
H+APQ +G P S + ++* EP STLKAM P LH T
Sbjct: 464 HSAPQFCTIGVQVPQPASIRSTALRSPSPSSNSTSTSK*NGLEPWSTLKAMFTPLYLHGT 285
>gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146316, DNA
sequence
Length = 719
Score = 101 bits (216), Expect(3) = 3e-046
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = +3 / +2
Query: 150 VACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVW 329
V C W G+D+ F VD+GSN NYLA+ IEYE + DL A ++ Q+ A W PMQ SWGA+W
Sbjct: 263 VQCEWPGVDVTFSVDSGSNPNYLAVLIEYEDSESDLSAVDIMQNSAGQWVPMQHSWGAIW 442
Query: 330 QYKSGS 347
+ SGS
Sbjct: 443 RLDSGS 460
Score = 69.3 bits (145), Expect(3) = 3e-046
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 42 EPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIR 149
E HFD+SGTAFGAMAKPG ADQLR AG LQ+QY R
Sbjct: 21 EGAHFDMSGTAFGAMAKPGMADQLRAAGLLQIQYTR 128
Score = 61.1 bits (127), Expect(3) = 1e-025
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 148 RMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSK 53
R+YW C RPA RS SA PGFAMAPNAVPL SK
Sbjct: 127 RVYWICSRPAARS*SAIPGFAMAPNAVPLMSK 32
Score = 56.5 bits (117), Expect(3) = 3e-046
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRS 458
L P +RLT SGRVL+ASN IPAGW PG YR+
Sbjct: 464 LHGPFHLRLTFSSGRVLIASNAIPAGWTPGVAYRA 568
Score = 52.4 bits (108), Expect(3) = 1e-025
Identities = 25/72 (34%), Positives = 29/72 (40%)
Frame = -1 / -3
Query: 346 EPDLYCHTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKP 167
EP+ AP E C+G H A C S++ AR* FEP ST K S P
Sbjct: 459 EPESSLQIAPHECCIGTHCPAEFCMMSTAERSLSLSSYSISTAR*FGFEPESTEKVTSTP 280
Query: 166 FQLHATRMYWTC 131
H T C
Sbjct: 279 GHSHCTLYIHIC 244
Score = 41.8 bits (85), Expect(3) = 1e-025
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 442 PGCHPAGMTLLATRTLPEPEVRRTDRG 362
PG HPAGM LLA TLPE VRR G
Sbjct: 552 PGVHPAGMALLAMSTLPELNVRRRWNG 472
>gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 135 bits (290), Expect(2) = 1e-045
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3 / +2
Query: 51 HFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAI 230
HFD+SGTA GAMA+PG AD+LR G L++ Y RV C + G+++AF+VD G+N Y + I
Sbjct: 5 HFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLI 184
Query: 231 EYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
E+E DGDL+A +L ++G++ W PM +WGA W+ +G
Sbjct: 185 EFEDDDGDLKAVDLMEAGSSVWTPMAHNWGATWRLNNG 298
Score = 77.6 bits (163), Expect(2) = 1e-024
Identities = 41/99 (41%), Positives = 47/99 (47%)
Frame = -1 / -3
Query: 343 PDLYCHTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPF 164
P L H APQ MG H P S++ ++* F P STL A P
Sbjct: 297 PLLRRHVAPQLCAMGVHTLLPASIRSTALRSPSSSSNSISTSK*NGFAPWSTLNATFTPG 118
Query: 163 QLHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKCT 47
LH T +Y P RS SA PG AMAP AVPL SKC+
Sbjct: 117 YLHGTLLYRILSTPPARSLSAMPGRAMAPMAVPLMSKCS 1
Score = 68.9 bits (144), Expect(2) = 1e-045
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP +RLTS SGRVLVA+N IPA W+PG+ YRS+VN+
Sbjct: 305 LRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNY 421
Score = 57.0 bits (118), Expect(2) = 1e-024
Identities = 26/40 (65%), Positives = 28/40 (70%)
Frame = -1 / -3
Query: 466 LTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLV 347
LT ER* LPG H AGM LLAT TLPE EV R+ GA L+
Sbjct: 417 LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLL 298
>gb|CW233769.1|CW233769 104_687_11213622_148_37379_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213622, DNA
sequence
Length = 710
Score = 97.7 bits (207), Expect(3) = 9e-044
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +3 / +2
Query: 147 RVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAA 290
RV CNWNG+D+AFRVDAGSNANYLAMAIEYE+GDGDLRA +L+ AA
Sbjct: 542 RVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVKLQNGAAA 685
Score = 89.5 bits (189), Expect(3) = 5e-032
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -1 / -1
Query: 148 RMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKCTGSTW 35
R+YWT RRP FRSWSAWPGFAMAPNAVPLRSK TGS W
Sbjct: 431 RVYWTGRRPTFRSWSAWPGFAMAPNAVPLRSKWTGSDW 318
Score = 82.6 bits (174), Expect(3) = 9e-044
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 36 QVEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIR 149
Q EPVHFDLSGTAFGAMAKPGQADQLRN GRL VQY R
Sbjct: 319 QSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTR 432
Score = 54.7 bits (113), Expect(3) = 5e-032
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 229 MAMAR*LAFEPASTLKAMSKPFQLHAT 149
MAMAR*LAFEPASTLKA S PFQLH T
Sbjct: 624 MAMAR*LAFEPASTLKATSTPFQLHGT 544
Score = 36.3 bits (73), Expect(3) = 9e-044
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3 / +2
Query: 276 QSGAAAWAPMQRSW 317
Q+GAAAWAPM+RSW
Sbjct: 668 QNGAAAWAPMERSW 709
Score = 32.7 bits (65), Expect(3) = 5e-032
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 316 QERCMGAHAAAPLC 275
QER MGAHAAAP C
Sbjct: 708 QERSMGAHAAAPFC 667
>gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 605
Score = 139 bits (299), Expect(2) = 1e-043
Identities = 51/101 (50%), Positives = 74/101 (73%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN+ YL
Sbjct: 92 VAKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNSVYL 271
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKS 341
A+ +E+E GDGD+ +L ++ + W PM+ SWG++W+ S
Sbjct: 272 AVLVEFEDGDGDVVQVDLMEANSGYWTPMRESWGSIWRLDS 394
Score = 58.3 bits (121), Expect(2) = 1e-043
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 404 LQAPFSLRITNESGRTLVANQVIPANWVPNTYYRSIIQY 520
>gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188j04, DNA
sequence
Length = 648
Score = 128 bits (275), Expect(2) = 1e-043
Identities = 48/101 (47%), Positives = 70/101 (69%)
Frame = +3 / -3
Query: 42 EPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLA 221
E HFD+SGT GAMA+PG AD+LR G L++ Y RV C + G+++AF+V G+N Y
Sbjct: 610 EVEHFDMSGTPMGAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVYQGANPFYFD 431
Query: 222 MAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
+ IE+E DGDL+A +L ++G++ W PM +WGA W+ +G
Sbjct: 430 VLIEFEDDDGDLKAVDLMEAGSSVWTPMALNWGATWRLNNG 308
Score = 74.8 bits (157), Expect(2) = 6e-024
Identities = 40/101 (39%), Positives = 46/101 (45%)
Frame = -1 / +3
Query: 343 PDLYCHTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPF 164
P L H APQ MG H P S++ ++* F P TL A P
Sbjct: 309 PLLRRHVAPQLSAMGVHTLLPASIRSTALRSPSSSSNSISTSK*NGFAPWYTLNATFTPG 488
Query: 163 QLHATRMYWTCRRPAFRSWSAWPGFAMAPNAVPLRSKCTGS 41
LH T +Y P RS SA PG AMAP VPL SKC+ S
Sbjct: 489 YLHGTLLYRILSTPPARSLSAMPGRAMAPMGVPLMSKCSTS 611
Score = 68.9 bits (144), Expect(2) = 1e-043
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +3 / -3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP +RLTS SGRVLVA+N IPA W+PG+ YRS+VN+
Sbjct: 301 LRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNY 185
Score = 57.0 bits (118), Expect(2) = 6e-024
Identities = 26/40 (65%), Positives = 28/40 (70%)
Frame = -1 / +3
Query: 466 LTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLV 347
LT ER* LPG H AGM LLAT TLPE EV R+ GA L+
Sbjct: 189 LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLL 308
>gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f054l06, DNA
sequence
Length = 588
Score = 103 bits (220), Expect(3) = 2e-043
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +3 / +2
Query: 96 GQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELK 275
G AD++R G ++VQY RV C + G+++AF+VD G+N Y + IE+E DGDL A +L
Sbjct: 146 GMADKVRAGGVVRVQYRRVPCKYPGVNVAFKVDQGANPFYFNVLIEFEDDDGDLSAVDLM 325
Query: 276 QSGAAAWAPMQRSWGAVWQYKSG 344
++G++ W PM +WGA W+ +G
Sbjct: 326 EAGSSVWTPMAHNWGATWRLNNG 394
Score = 71.6 bits (150), Expect(3) = 2e-043
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP +RLTS SGRVLVASN IPA W PG+TYRS+VN+
Sbjct: 401 LRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNY 517
Score = 59.3 bits (123), Expect(3) = 9e-026
Identities = 31/83 (37%), Positives = 35/83 (42%)
Frame = -1 / -1
Query: 343 PDLYCHTAPQERCMGAHAAAPLCFXXXXXXXXXXXXXSMAMAR*LAFEPASTLKAMSKPF 164
P L H APQ MG H P SM+ +* P STLKA P
Sbjct: 393 PLLRRHVAPQLCAMGVHTLLPASIRSTALRSPSSSSNSMSTLK*NGLAPWSTLKATFTPG 214
Query: 163 QLHATRMYWTCRRPAFRSWSAWP 95
LH T +YWT P R+ SA P
Sbjct: 213 YLHGTLLYWTLTTPPARTLSAMP 145
Score = 59.3 bits (123), Expect(3) = 9e-026
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -1 / -1
Query: 466 LTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLV 347
LT ER*VLPG H AGM LLAT TLPE EV R+ GA L+
Sbjct: 513 LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLL 394
Score = 40.5 bits (82), Expect(3) = 2e-043
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 42 EPVHFDLSGTAFGAMAKPGQ 101
E HFD+SGTA GAMAKPG+
Sbjct: 86 EVAHFDMSGTAMGAMAKPGR 145
Score = 37.3 bits (75), Expect(3) = 9e-026
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 97 PGFAMAPNAVPLRSKCTGS 41
PGFAMAP AVPL SKC S
Sbjct: 141 PGFAMAPMAVPLMSKCATS 85
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 141 bits (303), Expect(2) = 4e-043
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 85 VSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 264
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 265 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 390
Score = 54.7 bits (113), Expect(2) = 4e-043
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+V +
Sbjct: 397 LTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 513
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 141 bits (303), Expect(2) = 4e-043
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 126 VSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 305
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 306 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 431
Score = 54.7 bits (113), Expect(2) = 4e-043
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+V +
Sbjct: 438 LTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 554
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 141 bits (303), Expect(2) = 4e-043
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / -3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 733 VSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 554
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 553 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 428
Score = 54.7 bits (113), Expect(2) = 4e-043
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / -3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+V +
Sbjct: 421 LTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 305
>gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_G11_A002 3', mRNA sequence
Length = 781
Score = 138 bits (297), Expect(2) = 3e-042
Identities = 50/102 (49%), Positives = 73/102 (71%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTA GAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 71 VSKYHFDLSGTALGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 250
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 251 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 376
Score = 54.2 bits (112), Expect(2) = 3e-042
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+V +
Sbjct: 383 LTAPFSLRITNESGKTLVANQVIPANWVPNPYYRSIVQY 499
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 141 bits (303), Expect(2) = 3e-042
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 256 VSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 435
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 436 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 561
Score = 51.5 bits (106), Expect(2) = 3e-042
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSV 461
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+
Sbjct: 568 LTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSI 675
>gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 3', mRNA sequence
Length = 775
Score = 132 bits (282), Expect(2) = 2e-041
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +3 / +3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 126 VSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 305
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 306 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 419
Score = 58.3 bits (121), Expect(2) = 2e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 438 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 554
>gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 3', mRNA sequence
Length = 739
Score = 132 bits (282), Expect(2) = 2e-041
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 134 VSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 313
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 314 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 427
Score = 58.3 bits (121), Expect(2) = 2e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 446 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 562
>gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 3', mRNA sequence
Length = 668
Score = 132 bits (282), Expect(2) = 2e-041
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +3 / +1
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 19 VSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 198
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 199 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 312
Score = 58.3 bits (121), Expect(2) = 2e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 331 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 447
>gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 131 bits (280), Expect(2) = 4e-041
Identities = 46/94 (48%), Positives = 69/94 (73%)
Frame = +3 / +1
Query: 51 HFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAI 230
HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y A+ +
Sbjct: 7 HFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLV 186
Query: 231 EYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 187 EFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 288
Score = 58.3 bits (121), Expect(2) = 4e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 307 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 423
>gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_B04_A002 3', mRNA sequence
Length = 681
Score = 132 bits (282), Expect(2) = 6e-041
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +3 / +1
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 31 VSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 210
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 211 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 324
Score = 57.0 bits (118), Expect(2) = 6e-041
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 343 LQAPFSLRITNESGRKVVANRVIPANWAPNNYYRSIIQY 459
>gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 3', mRNA sequence
Length = 776
Score = 130 bits (278), Expect(2) = 8e-041
Identities = 46/98 (46%), Positives = 69/98 (70%)
Frame = +3 / +3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++ R+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 126 VSKYHFDLSGTAFGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 305
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 306 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 419
Score = 58.3 bits (121), Expect(2) = 8e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 438 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 554
>gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_G04_A002 3', mRNA sequence
Length = 695
Score = 130 bits (278), Expect(2) = 8e-041
Identities = 46/98 (46%), Positives = 69/98 (70%)
Frame = +3 / +3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++ R+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 48 VSKYHFDLSGTAFGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 227
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 228 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 341
Score = 58.3 bits (121), Expect(2) = 8e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 360 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 476
>gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 3', mRNA sequence
Length = 680
Score = 130 bits (278), Expect(2) = 8e-041
Identities = 46/98 (46%), Positives = 69/98 (70%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++ R+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 44 VSKYHFDLSGTAFGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 223
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 224 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 337
Score = 58.3 bits (121), Expect(2) = 8e-041
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 356 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 472
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 141 bits (303), Expect(2) = 5e-040
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 417 VSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 596
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 597 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 722
Score = 44.1 bits (90), Expect(2) = 5e-040
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQP 440
L AP S+R+T+ SG+ LVA+ VIPA W P
Sbjct: 729 LTAPFSLRITNESGKTLVANQVIPANWVP 815
>gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_A04_A002 3', mRNA sequence
Length = 622
Score = 116 bits (249), Expect(2) = 7e-040
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +3 / +2
Query: 78 GAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDL 257
GAMA+PG AD+LR G L++ Y RV C + G+++AF+VD G+N Y + IE+E DGDL
Sbjct: 5 GAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLIEFEDDDGDL 184
Query: 258 RAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
+A +L ++G++ W PM +WGA W+ +G
Sbjct: 185 KAVDLMEAGSSVWTPMAHNWGATWRLNNG 271
Score = 68.4 bits (143), Expect(2) = 7e-040
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP +RLTS SGRVLVA+N IPA W+PG+ YRS+VN+
Sbjct: 278 LRAPFGLRLTSDSGRVLVANNAIPAAWKPGQAYRSLVNY 394
>gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 3', mRNA sequence
Length = 755
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 44/98 (44%), Positives = 67/98 (68%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFD SGTA GAMAKPG+ ++ R+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 110 VSKYHFDFSGTALGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 289
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 290 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 403
Score = 58.3 bits (121), Expect(2) = 2e-039
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P YRS++ +
Sbjct: 422 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 538
>gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_D04_A002 3', mRNA sequence
Length = 762
Score = 129 bits (276), Expect(2) = 6e-039
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 51 HFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAI 230
HFDLSGTAFG+MA+PG D+LR+AG + +Q+ RVACN GL + F V AGSN NYLA+ +
Sbjct: 202 HFDLSGTAFGSMARPGLNDKLRHAGIIDIQFRRVACNNRGLTVNFHVQAGSNPNYLAVPV 381
Query: 231 EYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKS 341
EY + G + + ++ + W PM+RSWG+VW+ S
Sbjct: 382 EYANKAGTVVQMDAMEANSGHWMPMRRSWGSVWRLDS 492
Score = 52.8 bits (109), Expect(2) = 6e-039
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+ P S+R+ S +GR LVA+NVIPA W+ YRS V F
Sbjct: 502 LRGPFSMRIRSENGRTLVANNVIPANWRANTDYRSYVQF 618
>gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D04_A002 3', mRNA sequence
Length = 761
Score = 129 bits (276), Expect(2) = 6e-039
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 51 HFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAI 230
HFDLSGTAFG+MA+PG D+LR+AG + +Q+ RVACN GL + F V AGSN NYLA+ +
Sbjct: 202 HFDLSGTAFGSMARPGLNDKLRHAGIIDIQFRRVACNNRGLTVNFHVQAGSNPNYLAVPV 381
Query: 231 EYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKS 341
EY + G + + ++ + W PM+RSWG+VW+ S
Sbjct: 382 EYANKAGTVVQMDAMEANSGHWMPMRRSWGSVWRLDS 492
Score = 52.8 bits (109), Expect(2) = 6e-039
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+ P S+R+ S +GR LVA+NVIPA W+ YRS V F
Sbjct: 502 LRGPFSMRIRSENGRTLVANNVIPANWRANTDYRSYVQF 618
>gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11173790, DNA
sequence
Length = 672
Score = 129 bits (276), Expect(2) = 6e-039
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +3
Query: 51 HFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAI 230
HFDLSGTAFG+MA+PG D+LR+AG + +Q+ RVACN GL + F V AGSN NYLA+ +
Sbjct: 111 HFDLSGTAFGSMARPGLNDKLRHAGIIDIQFRRVACNNRGLTVNFHVQAGSNPNYLAVLV 290
Query: 231 EYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKS 341
EY + G + + ++ + W PM+RSWG+VW+ S
Sbjct: 291 EYANKAGTVVQMDAMEANSGHWMPMRRSWGSVWRLDS 401
Score = 52.8 bits (109), Expect(2) = 6e-039
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+ P S+R+ S +GR LVA+NVIPA W+ YRS V F
Sbjct: 411 LRGPFSMRIRSENGRTLVANNVIPANWRANTDYRSYVQF 527
>gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 5', mRNA sequence
Length = 889
Score = 126 bits (269), Expect(2) = 1e-038
Identities = 46/98 (46%), Positives = 69/98 (70%)
Frame = +3 / +1
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 442 VSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 621
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ S G++W+
Sbjct: 622 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESXGSIWR 735
Score = 55.1 bits (114), Expect(2) = 1e-038
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQAP S+R+T+ SGR LVA+ VIPA W P Y S++ +
Sbjct: 754 LQAPFSLRITNESGRKLVANRVIPANWAPNNYYGSIIQY 870
>gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E01_A002 5', mRNA sequence
Length = 456
Score = 141 bits (303), Expect(2) = 4e-038
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 62 VSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 241
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
A+ +E+E GDGD+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 242 AVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDSG 367
Score = 37.7 bits (76), Expect(2) = 4e-038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGW 434
L AP S+R+T+ SG+ LVA+ VI A W
Sbjct: 374 LTAPFSLRITNESGKTLVANQVIRANW 454
>gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475820, DNA
sequence
Length = 668
Score = 110 bits (234), Expect(3) = 4e-038
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +3 / +3
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V P HFDLSGTAFGAMAK + D+LR+AG + +Q+ RV C + GL + F ++ GSN NYL
Sbjct: 210 VAPYHFDLSGTAFGAMAKDDRNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYL 389
Query: 219 AMAIEYESGDGDLRAXELKQS 281
A+ +EY +GDGD+ +L +S
Sbjct: 390 AVLVEYGNGDGDVVQVDLMES 452
Score = 57.0 bits (118), Expect(3) = 4e-038
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
LQ P S+R+T+ SG+ LVA VIPA WQP Y S+V F
Sbjct: 540 LQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIVQF 656
Score = 30.4 bits (60), Expect(3) = 4e-038
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 294 WAPMQRSWGAVWQ 332
W PM+ SWG++W+
Sbjct: 483 WEPMRESWGSIWR 521
>gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_E09_A002 3', mRNA sequence
Length = 780
Score = 125 bits (268), Expect(2) = 8e-038
Identities = 49/97 (50%), Positives = 68/97 (70%)
Frame = +3 / +2
Query: 51 HFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAI 230
HFDLSGTAFG+MA+P D+LR+AG + +Q+ RVACN GL + F V AGSN NYLA+ +
Sbjct: 224 HFDLSGTAFGSMARPRLNDKLRHAGIIDIQFRRVACNNRGLTVNFHVQAGSNPNYLAVLV 403
Query: 231 EYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQYKS 341
EY + G + + ++ + W PM+RSWG+VW+ S
Sbjct: 404 EYANKAGTVVQMDAMEANSGHWMPMRRSWGSVWRLDS 514
Score = 52.8 bits (109), Expect(2) = 8e-038
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+ P S+R+ S +GR LVA+NVIPA W+ YRS V F
Sbjct: 524 LRGPFSMRIRSENGRTLVANNVIPANWRANTDYRSYVQF 640
>gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_B11_A002 3', mRNA sequence
Length = 779
Score = 103 bits (220), Expect(2) = 1e-037
Identities = 36/72 (50%), Positives = 53/72 (73%)
Frame = +3 / +3
Query: 132 QVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAPMQR 311
++QY RV C ++G++IAFRVD GSN YL + +E+E GDGDL A +L ++G W PM +
Sbjct: 3 KIQYKRVPCKYSGVNIAFRVDQGSNPFYLEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQ 182
Query: 312 SWGAVWQYKSGS 347
+WGA+W+Y S +
Sbjct: 183 NWGALWRYNSNT 218
Score = 74.4 bits (156), Expect(2) = 1e-037
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S+RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 228 LKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 344
>gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 122 bits (262), Expect(2) = 1e-037
Identities = 43/91 (47%), Positives = 66/91 (72%)
Frame = +3 / +2
Query: 72 AFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDG 251
AFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y A+ +E+E GDG
Sbjct: 2 AFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDG 181
Query: 252 DLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
D+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 182 DVVQVDLMEANSGSWTPMRESWGSIWRLDSG 274
Score = 54.7 bits (113), Expect(2) = 1e-037
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+V +
Sbjct: 281 LTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 397
>gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 122 bits (262), Expect(2) = 1e-037
Identities = 43/91 (47%), Positives = 66/91 (72%)
Frame = +3 / +2
Query: 72 AFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDG 251
AFGAMAKPG++D+LR+AG + +Q+ RV CN+ G + F V+ GSN Y A+ +E+E GDG
Sbjct: 2 AFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDG 181
Query: 252 DLRAXELKQSGAAAWAPMQRSWGAVWQYKSG 344
D+ +L ++ + +W PM+ SWG++W+ SG
Sbjct: 182 DVVQVDLMEANSGSWTPMRESWGSIWRLDSG 274
Score = 54.7 bits (113), Expect(2) = 1e-037
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L AP S+R+T+ SG+ LVA+ VIPA W P YRS+V +
Sbjct: 281 LTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 397
>gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 5', mRNA sequence
Length = 836
Score = 132 bits (282), Expect(2) = 2e-037
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +3 / +2
Query: 39 VEPVHFDLSGTAFGAMAKPGQADQLRNAGRLQVQYIRVACNWNGLDIAFRVDAGSNANYL 218
V HFDLSGTAFGAMAKPG+ ++LR+AG + +Q+ RV CN+ G + F V+ GSN Y
Sbjct: 443 VSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYF 622
Query: 219 AMAIEYESGDGDLRAXELKQSGAAAWAPMQRSWGAVWQ 332
A+ +E+E GDGD+ ++ ++ + W PM+ SWG++W+
Sbjct: 623 AVLVEFEDGDGDVVQVDIMEANSGYWTPMRESWGSIWR 736
Score = 45.1 bits (92), Expect(2) = 2e-037
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3 / +2
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGW 434
LQAP S+R+T+ SGR LVA+ VIPA W
Sbjct: 755 LQAPFSLRITNESGRKLVANRVIPANW 835
>gb|BG047628.1|BG047628 OV1_26_C01.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 98.7 bits (209), Expect(2) = 1e-030
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = -1 / -1
Query: 478 FPPKLTTER*VLPGCHPAGMTLLATRTLPEPEVRRTDRGACRLVEPD 338
FPPKLTTER*VLPGCHPAGMT LATR LPEPE+RRTDRGA +EPD
Sbjct: 268 FPPKLTTER*VLPGCHPAGMTPLATRVLPEPELRRTDRGAACRLEPD 128
Score = 90.9 bits (192), Expect(3) = 2e-037
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +3 / +3
Query: 339 SGSTNLQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNFGGN 479
SGS+ APLSVRL SGSG+ LVAS VIPAGWQPG TYRSVVNFGGN
Sbjct: 129 SGSSLQAAPLSVRLNSGSGKTLVASGVIPAGWQPGNTYRSVVNFGGN 269
Score = 60.6 bits (126), Expect(3) = 2e-037
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / +3
Query: 276 QSGAAAWAPMQRSWGAVWQYKSGSTNLQA 362
Q+GAAAWAPM+RSWGAVW+Y+S ++LQA
Sbjct: 63 QNGAAAWAPMERSWGAVWRYQSSGSSLQA 149
Score = 55.6 bits (115), Expect(2) = 1e-030
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 361 ACRLVEPDLYCHTAPQERCMGAHAAAPLC 275
ACRL D Y HTAPQER MGAHAAAP C
Sbjct: 148 ACRLEPDDWYRHTAPQERSMGAHAAAPFC 62
Score = 43.7 bits (89), Expect(3) = 2e-037
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3 / +3
Query: 219 AMAIEYESGDGDLRAXELKQSGAA 290
AMAIEYE+GDGDLRA EL+ AA
Sbjct: 9 AMAIEYEAGDGDLRAVELQNGAAA 80
>gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_C04_A002 3', mRNA sequence
Length = 657
Score = 102 bits (217), Expect(2) = 3e-037
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +3 / +1
Query: 132 QVQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAPMQR 311
+VQY RV C ++G++IAFRVD GSN Y + +E+E GDGDL A +L ++G W PM +
Sbjct: 1 KVQYKRVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQ 180
Query: 312 SWGAVWQYKSGS 347
+WGA+W+Y S +
Sbjct: 181 NWGALWRYNSNT 216
Score = 74.4 bits (156), Expect(2) = 3e-037
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / +1
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S+RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 226 LKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 342
>gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_D10_A002 3', mRNA sequence
Length = 669
Score = 101 bits (216), Expect(2) = 4e-037
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +3 / +3
Query: 135 VQYIRVACNWNGLDIAFRVDAGSNANYLAMAIEYESGDGDLRAXELKQSGAAAWAPMQRS 314
VQY RV C ++G++IAFRVD GSN Y + +E+E GDGDL A +L ++G W PM ++
Sbjct: 3 VQYKRVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQN 182
Query: 315 WGAVWQYKSGS 347
WGA+W+Y S +
Sbjct: 183 WGALWRYNSNT 215
Score = 74.4 bits (156), Expect(2) = 4e-037
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / +3
Query: 354 LQAPLSVRLTSGSGRVLVASNVIPAGWQPGRTYRSVVNF 470
L+AP S+RLTS SG+VLVA+NVIPAGW PG TYRS+VN+
Sbjct: 225 LKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNY 341
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 816,043,249
Number of Sequences: 832831
Number of extensions: 11758065
Number of successful extensions: 195200
Number of sequences better than 1.0e-020: 247
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21030021714
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)