TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829501.2.1
(1141 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 478 e-134
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 478 e-134
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 464 e-129
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 254 e-121
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 430 e-119
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 389 e-107
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 225 1e-094
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 254 4e-093
gb|BE367523.1|BE367523 PI1_8_E06.g1_A002 Pathogen induced 1... 336 5e-091
gb|CW206618.1|CW206618 104_635_11187687_148_36965_058 Sorgh... 264 4e-087
gb|CF760116.1|CF760116 DSAF1_55_F11.b1_A011 Drought-stresse... 305 7e-082
gb|BE366378.1|BE366378 PI1_32_H10.g1_A002 Pathogen induced ... 301 2e-080
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 160 2e-078
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 160 9e-077
gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated... 183 5e-076
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 160 3e-075
gb|CW470070.1|CW470070 fsbb001f223b16f0 Sorghum methylation... 280 3e-074
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 203 3e-073
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 236 7e-073
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 160 9e-069
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 236 2e-066
gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkal... 230 1e-063
gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorgh... 174 3e-063
gb|BE594394.1|BE594394 PI1_32_H10.b2_A002 Pathogen induced ... 182 2e-062
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 203 3e-061
gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1... 196 2e-059
gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced ... 133 2e-059
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 225 9e-058
gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum b... 160 4e-055
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 198 1e-049
gb|CW307371.1|CW307371 104_795_11468105_116_35728_073 Sorgh... 195 1e-048
gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds 114 1e-046
gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds 114 3e-046
gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum b... 184 2e-045
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 114 2e-044
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 112 6e-044
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 112 2e-043
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 116 6e-043
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 116 6e-043
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 116 6e-043
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 112 6e-043
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 108 1e-042
gb|CL186365.1|CL186365 104_401_10900160_116_32413_030 Sorgh... 113 2e-042
gb|BE358815.1|BE358815 DG1_32_F07.b1_A002 Dark Grown 1 (DG1... 116 2e-042
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 112 8e-042
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 112 1e-041
gb|CF480059.1|CF480059 POL1_63_B05.g1_A002 Pollen Sorghum b... 151 5e-041
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 122 6e-041
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 112 8e-040
gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation... 128 1e-038
gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sor... 128 1e-038
gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sor... 114 3e-038
gb|CW204755.1|CW204755 104_632_11186715_116_37060_002 Sorgh... 128 5e-038
gb|BE598196.1|BE598196 PI1_66_H02.b1_A002 Pathogen induced ... 118 6e-038
gb|CW039394.1|CW039394 104_272_10505475_115_30390 Sorghum m... 128 8e-038
gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 ... 114 8e-038
gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/c... 114 8e-038
gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/c... 114 8e-038
gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/c... 114 8e-038
gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/ce... 114 8e-038
gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (... 114 8e-038
gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1... 122 7e-037
gb|BE362915.2|BE362915 DG1_90_E12.g1_A002 Dark Grown 1 (DG1... 128 9e-037
gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation... 122 2e-036
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 118 2e-036
gb|CW110423.1|CW110423 104_483_11103696_148_34524_094 Sorgh... 128 2e-036
gb|BG049053.1|BG049053 OV1_22_F09.g1_A002 Ovary 1 (OV1) Sor... 120 3e-036
gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 ... 112 5e-036
gb|CN125314.1|CN125314 RHOH1_10_G12.b1_A002 Acid- and alkal... 152 8e-036
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 116 8e-036
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 116 8e-036
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 116 8e-036
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 116 9e-036
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 116 9e-036
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 116 9e-036
gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum m... 108 9e-036
gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated... 114 2e-035
gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/c... 115 2e-035
gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated... 114 6e-035
gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1... 114 6e-035
gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/c... 114 6e-035
gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/c... 114 6e-035
gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/ce... 114 6e-035
gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/c... 114 6e-035
gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/c... 114 6e-035
gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/c... 114 6e-035
gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/ce... 114 6e-035
gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 ... 114 6e-035
gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) So... 114 6e-035
gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorgh... 114 6e-035
gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/c... 114 8e-035
gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation... 112 2e-034
gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorgh... 112 2e-034
gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 ... 112 2e-034
gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/c... 112 2e-034
gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/c... 112 2e-034
gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/c... 112 2e-034
gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/ce... 112 2e-034
gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated... 112 2e-034
gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/c... 111 3e-034
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 95 8e-034
gb|CW493211.1|CW493211 fsbb001f283n22k0 Sorghum methylation... 122 1e-033
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 116 1e-033
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 116 2e-033
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 116 2e-033
gb|CW282926.1|CW282926 104_759_11408975_148_35475_094 Sorgh... 144 2e-033
gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorgh... 112 3e-033
gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 ... 114 5e-033
gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/c... 108 1e-032
gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorgh... 108 2e-032
gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation... 108 2e-032
gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/c... 108 2e-032
gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 ... 106 2e-032
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 118 2e-032
gb|CW265113.1|CW265113 104_734_11231683_116_35257_076 Sorgh... 76 2e-032
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 116 3e-032
gb|CX607501.1|CX607501 ANR1_29_C07.b1_A002 Anaerobic roots ... 85 3e-032
gb|CW184174.1|CW184174 104_600_11165012_116_36684_074 Sorgh... 69 8e-032
gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorgh... 114 1e-031
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 75 5e-031
gb|CW066077.1|CW066077 104_313_10523499_114_30148 Sorghum m... 104 5e-031
gb|AW678309.1|AW678309 WS1_14_G01.g1_A002 Water-stressed 1 ... 105 7e-031
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 116 7e-031
gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2... 128 1e-030
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 83 2e-030
gb|CW159279.1|CW159279 104_565_11149276_116_36410_010 Sorgh... 103 3e-030
gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/c... 97 6e-030
gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/c... 114 1e-029
gb|CD220568.1|CD220568 CCC1_68_B04.b1_A007 Callus culture/c... 97 1e-029
gb|CD223155.1|CD223155 CCC1_26_G01.b1_A007 Callus culture/c... 95 6e-029
gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (... 110 6e-029
gb|BG464391.1|BG464391 EM1_69_B11.g1_A002 Embryo 1 (EM1) So... 107 8e-029
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 88 1e-028
gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/c... 82 2e-028
gb|CD226725.1|CD226725 CCC1_47_H05.g1_A007 Callus culture/c... 114 2e-028
gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (... 106 5e-028
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 85 6e-028
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 85 6e-028
gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/c... 88 9e-028
gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (... 105 9e-028
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 92 1e-027
gb|CW159280.1|CW159280 104_565_11149276_148_36409_010 Sorgh... 94 1e-027
gb|CW117036.1|CW117036 104_493_11107443_148_34610_016 Sorgh... 122 1e-027
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 96 2e-027
gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves... 113 2e-027
gb|CW402098.1|CW402098 fsbb001f093d20k0 Sorghum methylation... 83 2e-027
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 83 4e-027
gb|CW022215.1|CW022215 104_161_10431706_5_30007 Sorghum met... 75 4e-027
gb|CW175039.1|CW175039 104_587_11157726_116_36573_025 Sorgh... 58 7e-027
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 71 2e-026
gb|CW069060.1|CW069060 104_318_10525580_1_30095 Sorghum met... 89 5e-026
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 75 5e-026
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 79 6e-026
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 79 6e-026
gb|CD223848.1|CD223848 CCC1_30_F03.g1_A007 Callus culture/c... 81 6e-026
gb|CD223041.1|CD223041 CCC1_25_F06.g1_A007 Callus culture/c... 81 9e-026
gb|CD223379.1|CD223379 CCC1_27_E04.g1_A007 Callus culture/c... 81 9e-026
gb|CW487999.1|CW487999 fsbb001f254c13k0 Sorghum methylation... 72 1e-025
gb|CD229365.1|CD229365 CCC1_14_D09.g1_A007 Callus culture/c... 79 4e-025
gb|CD226002.1|CD226002 CCC1_42_B03.g1_A007 Callus culture/c... 79 4e-025
gb|CD229697.1|CD229697 CCC1_18_D08.g1_A007 Callus culture/c... 81 5e-025
gb|CD229563.1|CD229563 CCC1_16_C07.g1_A007 Callus culture/c... 78 7e-025
gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/c... 74 1e-024
gb|CD229903.1|CD229903 CCC1_20_C03.g1_A007 Callus culture/c... 72 1e-024
gb|CN135214.1|CN135214 OX1_31_G02.b1_A002 Oxidatively-stres... 73 1e-024
gb|CW437319.1|CW437319 fsbb001f154g03k0 Sorghum methylation... 79 3e-024
gb|BG464063.1|BG464063 EM1_69_B11.b1_A002 Embryo 1 (EM1) So... 72 6e-024
gb|CD222029.1|CD222029 CCC1_1_C09.g1_A007 Callus culture/ce... 74 8e-024
gb|CD220480.1|CD220480 CCC1_67_F06.g1_A007 Callus culture/c... 74 8e-024
gb|CD220708.1|CD220708 CCC1_68_C10.g1_A007 Callus culture/c... 74 8e-024
gb|CD227763.1|CD227763 CCC1_53_C09.g1_A007 Callus culture/c... 74 1e-023
gb|CN135290.1|CN135290 OX1_31_G02.g1_A002 Oxidatively-stres... 73 1e-023
gb|CW200665.1|CW200665 104_626_11184168_148_36867_092 Sorgh... 97 4e-023
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 88 4e-023
gb|CW464036.1|CW464036 fsbb001f213a24k0 Sorghum methylation... 103 4e-023
gb|CW284180.1|CW284180 104_760_11409637_148_35487_049 Sorgh... 103 5e-023
gb|CW445566.1|CW445566 fsbb001f170m12f0 Sorghum methylation... 103 5e-023
gb|CD226858.1|CD226858 CCC1_48_E04.g1_A007 Callus culture/c... 72 5e-023
gb|CW350033.1|CW350033 fsbb001f011c12f0 Sorghum methylation... 103 6e-023
gb|CL191324.1|CL191324 104_410_10906720_114_32533_060 Sorgh... 79 8e-023
gb|CD462568.1|CD462568 ETH1_38_G06.g1_A002 Ethylene-treated... 70 2e-022
gb|CX606849.1|CX606849 ANR1_5_G02.b1_A002 Anaerobic roots S... 64 2e-022
gb|BG463695.1|BG463695 EM1_50_H02.g1_A002 Embryo 1 (EM1) So... 72 2e-022
gb|CX618297.1|CX618297 GABR1_38_F09.g1_A002 GA- or brassino... 75 7e-022
gb|CD226602.1|CD226602 CCC1_46_E08.g1_A007 Callus culture/c... 88 1e-021
gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorgh... 105 1e-021
gb|CD228252.1|CD228252 CCC1_6_E03.g1_A007 Callus culture/ce... 67 2e-021
gb|CD221556.1|CD221556 CCC1_55_F09.g1_A007 Callus culture/c... 88 4e-021
gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorgh... 103 5e-021
gb|CW438619.1|CW438619 fsbb001f156f15f0 Sorghum methylation... 102 9e-021
>gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468105, DNA
sequence
Length = 603
Score = 478 bits (1038), Expect = e-134
Identities = 185/198 (93%), Positives = 189/198 (95%)
Frame = -2 / +1
Query: 753 TTGAPDVQKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGASGPDYCEPSAQW 574
T +PDVQKRELAAFLAQTSHETTGGWATAPDG YAWGYCFKEE+ GASGPDYCEPS QW
Sbjct: 10 TGASPDVQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEKDGASGPDYCEPSTQW 189
Query: 573 PCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQS 394
PCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVA D TVSFETAVWFWMTPQS
Sbjct: 190 PCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVAADATVSFETAVWFWMTPQS 369
Query: 393 PKPSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYC 214
PKPSCHDVMTGQWTPSAAD AAGRLPGYGVVTNIINGGLECGHGAD+RVADRIGFYKRYC
Sbjct: 370 PKPSCHDVMTGQWTPSAADIAAGRLPGYGVVTNIINGGLECGHGADTRVADRIGFYKRYC 549
Query: 213 DLLGVSYGDNLDCANQTP 160
DLLGVSYGDNLDCA+Q P
Sbjct: 550 DLLGVSYGDNLDCAHQMP 603
Score = 157 bits (338), Expect(3) = 2e-085
Identities = 69/77 (89%), Positives = 70/77 (90%)
Frame = +2 / -2
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*SGPDAPPCSSLKQ*PQA*GPSGAVAHPPVVS 691
L*L*+IWMGPRP*YFFPAAHGH LGSQ*SGPDAP SSLKQ*PQA* PSGAVAHPPVVS
Sbjct: 251 L*L*EIWMGPRP*YFFPAAHGHCVLGSQ*SGPDAPSFSSLKQ*PQA*APSGAVAHPPVVS 72
Query: 692 WDVCARNAASSRFCTSG 742
DVCARNAASSRF TSG
Sbjct: 71 CDVCARNAASSRFWTSG 21
Score = 146 bits (314), Expect(3) = 2e-085
Identities = 61/83 (73%), Positives = 66/83 (79%)
Frame = +2 / -2
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL* PI SATR+SAPWPHSR G+LPAA+SAA+GVHCPVMTSWHDGLGDC
Sbjct: 542 RL*NPILSATRVSAPWPHSRPPLMMLVTTPYPGNLPAAMSAADGVHCPVMTSWHDGLGDC 363
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSN+TV S ATRSGL
Sbjct: 362 GVIQNHTAVSNETVASAATRSGL 294
Score = 66.6 bits (139), Expect(3) = 2e-027
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +1 / -1
Query: 316 RQPAGGRVSRGGRPLPRHDVVARRLGRLRRHPEP 417
RQP G VS RPLPRHDVVARRLGRLRRHPEP
Sbjct: 447 RQPPRGDVSCRRRPLPRHDVVARRLGRLRRHPEP 346
Score = 55.1 bits (114), Expect(3) = 2e-027
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +3 / -3
Query: 507 RSCSCRISGWARGRSTSSPRRTATGRW 587
RSCSCR SGW RGRSTSS RRTAT W
Sbjct: 256 RSCSCRRSGWVRGRSTSSRRRTATVCW 176
Score = 52.8 bits (109), Expect(3) = 2e-085
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 160 GRLVGAVQVVAVADPKQVTVSFVEADPV 243
G LVGAVQVVA+ADPKQV V+ VE DPV
Sbjct: 603 GHLVGAVQVVAIADPKQVAVALVEPDPV 520
Score = 40.5 bits (82), Expect(3) = 2e-027
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3 / -3
Query: 162 ASGWRSPSCRRS*PQASHSIVC 227
ASG RSPSCR S*PQAS S C
Sbjct: 601 ASGGRSPSCRHS*PQASRSSAC 536
>gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187687, DNA
sequence
Length = 639
Score = 478 bits (1037), Expect = e-134
Identities = 186/198 (93%), Positives = 188/198 (94%)
Frame = -2 / -1
Query: 738 DVQKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGASGPDYCEPSAQWPCAAG 559
D QKRELAAFLAQTSHETTGGWATAPDG YAWGYCFKEEQG ASGPDYCEPS QWPCAAG
Sbjct: 639 DTQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAASGPDYCEPSTQWPCAAG 460
Query: 558 KKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSC 379
KKYYGRGPIQISYNYNYG AGQAIGAGILANPDLVA+DPTVSFETAVWFWMTPQSPKPSC
Sbjct: 459 KKYYGRGPIQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSC 280
Query: 378 HDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGV 199
H VMTGQWTPS ADTAAGRLPGYGVVTNIINGGLECG GADSRVADRIGFYKRYCDLLGV
Sbjct: 279 HAVMTGQWTPSGADTAAGRLPGYGVVTNIINGGLECGKGADSRVADRIGFYKRYCDLLGV 100
Query: 198 SYGDNLDCANQTPFNG*L 145
SYGDNLDCANQ PFN *+
Sbjct: 99 SYGDNLDCANQKPFNS*I 46
Score = 149 bits (321), Expect(3) = 5e-079
Identities = 65/73 (89%), Positives = 67/73 (91%)
Frame = +2 / +2
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*SGPDAPPCSSLKQ*PQA*GPSGAVAHPPVVS 691
L*L*+IWMGPRP*YFFPAAHGH LGSQ*SGPDA PCSSLKQ*PQA* PSGAVAHPPVVS
Sbjct: 413 L*L*EIWMGPRP*YFFPAAHGHCVLGSQ*SGPDAAPCSSLKQ*PQA*APSGAVAHPPVVS 592
Query: 692 WDVCARNAASSRF 730
+V ARNAASSRF
Sbjct: 593 CEVWARNAASSRF 631
Score = 143 bits (307), Expect(3) = 5e-079
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = +2 / +2
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAP PHSR G+LPAAVSA +GVH PVMT+WHDGLGDC
Sbjct: 122 RL*KPIRSATRLSAPLPHSRPPLMMLVTTPYPGNLPAAVSAPDGVHWPVMTAWHDGLGDC 301
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSNDTVGS ATRSGL
Sbjct: 302 GVIQNHTAVSNDTVGSDATRSGL 370
Score = 104 bits (222), Expect(2) = 3e-031
Identities = 50/89 (56%), Positives = 52/89 (58%)
Frame = +1 / +1
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVGXXXXXXXXXXXXXXXXXXXXXXXRQPAG 330
AVEG LVGAVQV+AVAD KQV V+ VEADPV RQP
Sbjct: 52 AVEGLLVGAVQVIAVADTKQVAVALVEADPVSDAAISAFAALEATIDDVSDNTIPRQPPR 231
Query: 331 GRVSRGGRPLPRHDVVARRLGRLRRHPEP 417
G VS RPL HD VARRLGRLRRHPEP
Sbjct: 232 GGVSSRRRPLAGHDGVARRLGRLRRHPEP 318
Score = 52.8 bits (109), Expect(2) = 3e-031
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 507 RSCSCRISGWARGRSTSSPRRTATGRW 587
RSCSCR SGW GRSTSS RRTAT W
Sbjct: 408 RSCSCRRSGWVHGRSTSSRRRTATVCW 488
Score = 42.8 bits (87), Expect(3) = 5e-079
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 150 SR*RASGWRSPSCRRS*PQASHSIVC 227
S *RASGWRSPS RRS* QAS S C
Sbjct: 51 SC*RASGWRSPSYRRS*HQASRSSAC 128
>gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 632
Score = 464 bits (1007), Expect = e-129
Identities = 180/191 (94%), Positives = 182/191 (95%)
Frame = -2 / +2
Query: 717 AAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRG 538
AAFLAQTSHETTGGWATAPDG YAWGYCFKEEQG ASGPDYCEPS QWPCAAGKKYYGRG
Sbjct: 8 AAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAASGPDYCEPSTQWPCAAGKKYYGRG 187
Query: 537 PIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQ 358
PIQISYNYNYG AGQAIGAGILANPDLVA+DPTVSFETAVWFWMTPQSPKPSCH VMTGQ
Sbjct: 188 PIQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQ 367
Query: 357 WTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLD 178
WTPS ADTAAGRLPGYGVVTNIINGGLECG GADSRVADRIGFYKRYCDLLGVSYGDNLD
Sbjct: 368 WTPSGADTAAGRLPGYGVVTNIINGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLD 547
Query: 177 CANQTPFNG*L 145
CANQ PFN *+
Sbjct: 548 CANQKPFNS*I 580
Score = 143 bits (307), Expect(3) = 5e-077
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = +2 / -3
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAP PHSR G+LPAAVSA +GVH PVMT+WHDGLGDC
Sbjct: 504 RL*KPIRSATRLSAPLPHSRPPLMMLVTTPYPGNLPAAVSAPDGVHWPVMTAWHDGLGDC 325
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSNDTVGS ATRSGL
Sbjct: 324 GVIQNHTAVSNDTVGSDATRSGL 256
Score = 143 bits (306), Expect(3) = 5e-077
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +2 / -3
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*SGPDAPPCSSLKQ*PQA*GPSGAVAHPPVVS 691
L*L*+IWMGPRP*YFFPAAHGH LGSQ*SGPDA PCSSLKQ*PQA* PSGAVAHPPVVS
Sbjct: 213 L*L*EIWMGPRP*YFFPAAHGHCVLGSQ*SGPDAAPCSSLKQ*PQA*APSGAVAHPPVVS 34
Query: 692 WDVCARNAAS 721
+V ARNAAS
Sbjct: 33 CEVWARNAAS 4
Score = 104 bits (222), Expect(2) = 3e-031
Identities = 50/89 (56%), Positives = 52/89 (58%)
Frame = +1 / -2
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVGXXXXXXXXXXXXXXXXXXXXXXXRQPAG 330
AVEG LVGAVQV+AVAD KQV V+ VEADPV RQP
Sbjct: 574 AVEGLLVGAVQVIAVADTKQVAVALVEADPVSDAAISAFAALEATIDDVSDNTIPRQPPR 395
Query: 331 GRVSRGGRPLPRHDVVARRLGRLRRHPEP 417
G VS RPL HD VARRLGRLRRHPEP
Sbjct: 394 GGVSSRRRPLAGHDGVARRLGRLRRHPEP 308
Score = 52.8 bits (109), Expect(2) = 3e-031
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3 / -1
Query: 507 RSCSCRISGWARGRSTSSPRRTATGRW 587
RSCSCR SGW GRSTSS RRTAT W
Sbjct: 218 RSCSCRRSGWVHGRSTSSRRRTATVCW 138
Score = 42.8 bits (87), Expect(3) = 5e-077
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +3 / -1
Query: 150 SR*RASGWRSPSCRRS*PQASHSIVC 227
S *RASGWRSPS RRS* QAS S C
Sbjct: 575 SC*RASGWRSPSYRRS*HQASRSSAC 498
>gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072j20, DNA
sequence
Length = 740
Score = 254 bits (550), Expect(3) = e-121
Identities = 100/112 (89%), Positives = 104/112 (92%)
Frame = -2 / -1
Query: 483 AGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAAGRLPGYGV 304
AGIL +PDLVATD TVSFETAVWFWMTPQ PKPSCH V+TGQW PS ADTAAGRLPGYGV
Sbjct: 377 AGILDDPDLVATDATVSFETAVWFWMTPQPPKPSCHAVVTGQWAPSPADTAAGRLPGYGV 198
Query: 303 VTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQTPFNG* 148
VTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYG+N+DCANQ PFN *
Sbjct: 197 VTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGNNVDCANQRPFNS* 42
Score = 167 bits (360), Expect(3) = e-121
Identities = 61/77 (79%), Positives = 71/77 (92%)
Frame = -2 / -1
Query: 837 RNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQKRELAAFLAQTSHETTGGWATAPD 658
RN ACPA+GFYTY+ F+AAAN+FPGFGTTG+PD QKRE+AAFLAQTSHETTGGWA+APD
Sbjct: 740 RNKPACPASGFYTYSAFVAAANSFPGFGTTGSPDAQKREVAAFLAQTSHETTGGWASAPD 561
Query: 657 GPYAWGYCFKEEQGGAS 607
GPYAWGYC+KEE+ A+
Sbjct: 560 GPYAWGYCYKEEKDAAA 510
Score = 147 bits (316), Expect(4) = 8e-081
Identities = 62/82 (75%), Positives = 65/82 (79%)
Frame = +2 / +1
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAPWPHSR GSLPAAVSA +G HCPV T+WHDGLG C
Sbjct: 115 RL*KPIRSATRLSAPWPHSRPPLMMLVTTPYPGSLPAAVSAGDGAHCPVTTAWHDGLGGC 294
Query: 401 GVIQNQTAVSNDTVGSVATRSG 466
GVIQNQTAVSN+TV SVATRSG
Sbjct: 295 GVIQNQTAVSNETVASVATRSG 360
Score = 100 bits (213), Expect(3) = 3e-032
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -2 / -1
Query: 651 YAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGA 481
+ + Y +++ ++ YC PSA WPCAAGKKYYGRGPIQISYNYNYGPAG+AIGA
Sbjct: 548 WGYCYKEEKDAAASAPEAYCRPSALWPCAAGKKYYGRGPIQISYNYNYGPAGEAIGA 378
Score = 95.5 bits (202), Expect(4) = 8e-081
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2 / +1
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
SSL Q*PQA*GPSGA AHPPVVS DVCARNAA+SRF SG PVVPKPGN
Sbjct: 526 SSL*Q*PQA*GPSGADAHPPVVSCDVCARNAATSRFWASGLPVVPKPGN 672
Score = 69.8 bits (146), Expect(3) = 3e-031
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = +1 / +3
Query: 316 RQPAGGRVSRGGRPLPRHDVVARRLGRLRRHPEPD 420
RQPAGG V R RPLPR D VARRLGRLRRHPEPD
Sbjct: 210 RQPAGGGVGRRRRPLPRDDGVARRLGRLRRHPEPD 314
Score = 62.5 bits (130), Expect(4) = 8e-081
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2 / +1
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*S 601
L*L*+IWMGPRP*YFFPAAHGH ALG Q*+
Sbjct: 409 L*L*EIWMGPRP*YFFPAAHGHSALGLQ*A 498
Score = 58.8 bits (122), Expect(3) = 3e-031
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / +2
Query: 504 ARSCSCRISGWARGRSTSSPRRTATGR 584
ARSCSCR SGWARGRSTSS RRTAT R
Sbjct: 401 ARSCSCRRSGWARGRSTSSRRRTATAR 481
Score = 55.1 bits (114), Expect(4) = 8e-081
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVG 246
AVE LVGAV VVAVA+PKQV V+ VEADPVG
Sbjct: 45 AVEWPLVGAVHVVAVANPKQVAVALVEADPVG 140
Score = 54.7 bits (113), Expect(3) = e-121
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1 / -3
Query: 577 VAVRRGEEVLRPRAHPDILQLQLRA 503
VAVRR EEVLRPRAHPD+LQLQLRA
Sbjct: 474 VAVRRREEVLRPRAHPDLLQLQLRA 400
Score = 46.4 bits (95), Expect(3) = 3e-031
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 135 ASLLISR*RASGWRSPSCRRS*PQASHSIVC 227
A ++S * ASGWRSP C RS*PQAS S C
Sbjct: 29 AECMLSC*MASGWRSPRCCRS*PQASRSSAC 121
Score = 42.3 bits (86), Expect(3) = 3e-032
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1 / -3
Query: 226 QTIL*LAWGQLRRQLGLRQPDALQRL 149
Q +L LAWG LR+Q GLRQP+A+Q+L
Sbjct: 120 QALLRLAWG*LRQQRGLRQPEAIQQL 43
Score = 40.5 bits (82), Expect(3) = 3e-032
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3 / -2
Query: 338 TRPPAGCRXXXXXXXXXXXXXXXXXXXXXXXXTGSASTNDTVTCLG 201
T PPAGCR TGSAST+ T TCLG
Sbjct: 232 TPPPAGCRGMASSPTSSTAASSAAMAPIAASPTGSASTSATATCLG 95
>gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 600
Score = 430 bits (933), Expect = e-119
Identities = 167/180 (92%), Positives = 169/180 (93%)
Frame = -2 / +3
Query: 684 TGGWATAPDGPYAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYG 505
TGGWATAPDG YA GYCFKEEQG ASGP YCEPS QWPCAAGKKYYGRGPIQISYNYNYG
Sbjct: 3 TGGWATAPDGAYAGGYCFKEEQGAASGPXYCEPSTQWPCAAGKKYYGRGPIQISYNYNYG 182
Query: 504 PAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAAG 325
AGQAIGAGILANPDLVA+DPTVSFETAVWFWMTPQSPKPSCH VMTGQWTPS ADTAAG
Sbjct: 183 AAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQWTPSGADTAAG 362
Query: 324 RLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQTPFNG*L 145
RLPGYGVVTNIINGGLECG GADSRVADRIGFYKRYCDLLGVSYGDNLDCANQ PFN *+
Sbjct: 363 RLPGYGVVTNIINGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQKPFNS*I 542
Score = 143 bits (307), Expect(3) = 2e-070
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = +2 / -3
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAP PHSR G+LPAAVSA +GVH PVMT+WHDGLGDC
Sbjct: 466 RL*KPIRSATRLSAPLPHSRPPLMMLVTTPYPGNLPAAVSAPDGVHWPVMTAWHDGLGDC 287
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSNDTVGS ATRSGL
Sbjct: 286 GVIQNHTAVSNDTVGSDATRSGL 218
Score = 121 bits (258), Expect(3) = 2e-070
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = +2 / -3
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*SGPDAPPCSSLKQ*PQA*GPSGAVAHPPV 685
L*L*+IWMGPRP*YFFPAAHGH LGSQ SGPDA PCSSLKQ*P A* PSGAVAHPPV
Sbjct: 175 L*L*EIWMGPRP*YFFPAAHGHCVLGSQXSGPDAAPCSSLKQ*PPA*APSGAVAHPPV 2
Score = 104 bits (222), Expect(2) = 3e-031
Identities = 50/89 (56%), Positives = 52/89 (58%)
Frame = +1 / -2
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVGXXXXXXXXXXXXXXXXXXXXXXXRQPAG 330
AVEG LVGAVQV+AVAD KQV V+ VEADPV RQP
Sbjct: 536 AVEGLLVGAVQVIAVADTKQVAVALVEADPVSDAAISAFAALEATIDDVSDNTIPRQPPR 357
Query: 331 GRVSRGGRPLPRHDVVARRLGRLRRHPEP 417
G VS RPL HD VARRLGRLRRHPEP
Sbjct: 356 GGVSSRRRPLAGHDGVARRLGRLRRHPEP 270
Score = 52.8 bits (109), Expect(2) = 3e-031
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3 / -1
Query: 507 RSCSCRISGWARGRSTSSPRRTATGRW 587
RSCSCR SGW GRSTSS RRTAT W
Sbjct: 180 RSCSCRRSGWVHGRSTSSRRRTATVCW 100
Score = 42.8 bits (87), Expect(3) = 2e-070
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +3 / -1
Query: 150 SR*RASGWRSPSCRRS*PQASHSIVC 227
S *RASGWRSPS RRS* QAS S C
Sbjct: 537 SC*RASGWRSPSYRRS*HQASRSSAC 460
>gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254j12, DNA
sequence
Length = 507
Score = 389 bits (844), Expect = e-107
Identities = 151/161 (93%), Positives = 152/161 (94%)
Frame = -2 / -3
Query: 786 IAAANAFPGFGTTGAPDVQKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
IAAANAFPGFGTTG D QKRELAAFLAQTSHETTGGWATAPDG YAWGYCFKEEQG AS
Sbjct: 505 IAAANAFPGFGTTGGADTQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAAS 326
Query: 606 GPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFE 427
GPDYCEPS QWPCAAGKKYYGRGPIQISYNYNYG AGQAIGAGILANPDLVA+DPTVSFE
Sbjct: 325 GPDYCEPSTQWPCAAGKKYYGRGPIQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFE 146
Query: 426 TAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAAGRLPGYGV 304
TAVWFWMTPQSPKPSCH VMTGQWTPS ADTAAGRLPGYGV
Sbjct: 145 TAVWFWMTPQSPKPSCHAVMTGQWTPSGADTAAGRLPGYGV 23
Score = 171 bits (368), Expect(2) = 6e-068
Identities = 74/86 (86%), Positives = 76/86 (88%)
Frame = +2 / +3
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*SGPDAPPCSSLKQ*PQA*GPSGAVAHPPVVS 691
L*L*+IWMGPRP*YFFPAAHGH LGSQ*SGPDA PCSSLKQ*PQA* PSGAVAHPPVVS
Sbjct: 231 L*L*EIWMGPRP*YFFPAAHGHCVLGSQ*SGPDAAPCSSLKQ*PQA*APSGAVAHPPVVS 410
Query: 692 WDVCARNAASSRFCTSGAPVVPKPGN 769
+V ARNAASSRF S PVVPKPGN
Sbjct: 411 CEVWARNAASSRFWVSAPPVVPKPGN 488
Score = 108 bits (231), Expect(2) = 6e-068
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +2 / +3
Query: 317 GSLPAAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
G+LPAAVSA +GVH PVMT+WHDGLGDCGVIQN TAVSNDTVGS ATRSGL
Sbjct: 36 GNLPAAVSAPDGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGL 188
>gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_F07_A002 3', mRNA sequence
Length = 809
Score = 225 bits (486), Expect(2) = 1e-094
Identities = 81/128 (63%), Positives = 105/128 (82%)
Frame = -2 / +1
Query: 585 SAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
+ +WPC AG+ Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA DP V+F+TA+WFWM
Sbjct: 274 TTEWPCVAGESYHGRGPIQLSWNFNYGPAGQALGFDGLGNPEVVAGDPEVAFKTALWFWM 453
Query: 405 TPQSPKPSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFY 226
TP+SPKPSCHDVM G++ P+ AD AA R G+G+ TNIINGG+ECG +V DRIGF+
Sbjct: 454 TPRSPKPSCHDVMVGRYRPTDADVAANRTAGFGLTTNIINGGIECGKTGVPQVDDRIGFF 633
Query: 225 KRYCDLLG 202
+RYC+LLG
Sbjct: 634 RRYCELLG 657
Score = 144 bits (308), Expect(2) = 1e-094
Identities = 55/85 (64%), Positives = 63/85 (74%)
Frame = -2 / +1
Query: 861 LFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQKRELAAFLAQTSHETT 682
L++ M H++D ACPA+GFY Y F+ AA FP FG G +KRE+AAFLAQ SHETT
Sbjct: 1 LYSDMFKHKDDTACPAHGFYNYTSFLRAAERFPAFGGDGDAATRKREVAAFLAQISHETT 180
Query: 681 GGWATAPDGPYAWGYCFKEEQGGAS 607
GGWATAPDGPYAWG CFKEE AS
Sbjct: 181 GGWATAPDGPYAWGLCFKEEISPAS 255
Score = 78.0 bits (164), Expect(3) = 3e-035
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2 / -1
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPG 766
SSLKQ P A*GPSGAVAHPPVVS ++CARNAA+SRF + +P P G
Sbjct: 239 SSLKQSPHA*GPSGAVAHPPVVSCEICARNAATSRFRVAASPSPPNAG 96
Score = 73.0 bits (153), Expect(3) = 3e-035
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = +2 / -1
Query: 329 AAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
AA SA+ G + P MTSWHDGLGD GVIQN +AV N T GS AT SGL
Sbjct: 530 AATSASVGRYRPTMTSWHDGLGDLGVIQNHSAVLNATSGSPATTSGL 390
Score = 37.7 bits (76), Expect(3) = 3e-035
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 524 DIWMGPRP*YFFPAAHGH 577
D WMGPRP Y PA HGH
Sbjct: 335 DSWMGPRPWYDSPATHGH 282
>gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia92e12 5', DNA sequence
Length = 608
Score = 254 bits (550), Expect(3) = 4e-093
Identities = 100/112 (89%), Positives = 104/112 (92%)
Frame = -2 / -1
Query: 483 AGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAAGRLPGYGV 304
AGIL +PDLVATD TVSFETAVWFWMTPQ PKPSCH V+TGQW PS ADTAAGRLPGYGV
Sbjct: 368 AGILDDPDLVATDATVSFETAVWFWMTPQPPKPSCHAVVTGQWAPSPADTAAGRLPGYGV 189
Query: 303 VTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQTPFNG* 148
VTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYG+N+DCANQ PFN *
Sbjct: 188 VTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGNNVDCANQRPFNS* 33
Score = 147 bits (316), Expect(5) = 4e-065
Identities = 62/82 (75%), Positives = 65/82 (79%)
Frame = +2 / +1
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAPWPHSR GSLPAAVSA +G HCPV T+WHDGLG C
Sbjct: 106 RL*KPIRSATRLSAPWPHSRPPLMMLVTTPYPGSLPAAVSAGDGAHCPVTTAWHDGLGGC 285
Query: 401 GVIQNQTAVSNDTVGSVATRSG 466
GVIQNQTAVSN+TV SVATRSG
Sbjct: 286 GVIQNQTAVSNETVASVATRSG 351
Score = 100 bits (213), Expect(3) = 4e-093
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -2 / -1
Query: 651 YAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGA 481
+ + Y +++ ++ YC PSA WPCAAGKKYYGRGPIQISYNYNYGPAG+AIGA
Sbjct: 539 WGYCYKEEKDAAASAPEAYCRPSALWPCAAGKKYYGRGPIQISYNYNYGPAGEAIGA 369
Score = 69.8 bits (146), Expect(3) = 3e-031
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = +1 / +3
Query: 316 RQPAGGRVSRGGRPLPRHDVVARRLGRLRRHPEPD 420
RQPAGG V R RPLPR D VARRLGRLRRHPEPD
Sbjct: 201 RQPAGGGVGRRRRPLPRDDGVARRLGRLRRHPEPD 305
Score = 61.6 bits (128), Expect(5) = 4e-065
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +1
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ 595
L*L*+IWMGPRP*YFFPAAHGH ALG Q
Sbjct: 400 L*L*EIWMGPRP*YFFPAAHGHSALGLQ 483
Score = 58.8 bits (122), Expect(3) = 3e-031
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / +2
Query: 504 ARSCSCRISGWARGRSTSSPRRTATGR 584
ARSCSCR SGWARGRSTSS RRTAT R
Sbjct: 392 ARSCSCRRSGWARGRSTSSRRRTATAR 472
Score = 55.1 bits (114), Expect(5) = 4e-065
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVG 246
AVE LVGAV VVAVA+PKQV V+ VEADPVG
Sbjct: 36 AVEWPLVGAVHVVAVANPKQVAVALVEADPVG 131
Score = 54.7 bits (113), Expect(4) = 5e-029
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1 / -3
Query: 577 VAVRRGEEVLRPRAHPDILQLQLRA 503
VAVRR EEVLRPRAHPD+LQLQLRA
Sbjct: 465 VAVRRREEVLRPRAHPDLLQLQLRA 391
Score = 51.9 bits (107), Expect(4) = 5e-029
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -2 / -1
Query: 705 AQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
A + + G A+APDGPYAWGYC+KEE+ A+
Sbjct: 599 ADIARDDGRGGASAPDGPYAWGYCYKEEKDAAA 501
Score = 46.4 bits (95), Expect(3) = 3e-031
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 135 ASLLISR*RASGWRSPSCRRS*PQASHSIVC 227
A ++S * ASGWRSP C RS*PQAS S C
Sbjct: 20 AECMLSC*MASGWRSPRCCRS*PQASRSSAC 112
Score = 42.3 bits (86), Expect(4) = 5e-029
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1 / -3
Query: 226 QTIL*LAWGQLRRQLGLRQPDALQRL 149
Q +L LAWG LR+Q GLRQP+A+Q+L
Sbjct: 111 QALLRLAWG*LRQQRGLRQPEAIQQL 34
Score = 40.5 bits (82), Expect(4) = 5e-029
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3 / -2
Query: 338 TRPPAGCRXXXXXXXXXXXXXXXXXXXXXXXXTGSASTNDTVTCLG 201
T PPAGCR TGSAST+ T TCLG
Sbjct: 223 TPPPAGCRGMASSPTSSTAASSAAMAPIAASPTGSASTSATATCLG 86
Score = 32.2 bits (64), Expect(5) = 4e-065
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 623 SSLKQ*PQA*GPSGAVAHP 679
SSL Q*PQA*GPSGA A P
Sbjct: 517 SSL*Q*PQA*GPSGADAPP 573
Score = 29.0 bits (57), Expect(5) = 4e-065
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 677 PPVVSWDVCARN 712
PPVVS DVCARN
Sbjct: 573 PPVVSRDVCARN 608
Score = 28.1 bits (55), Expect(3) = 4e-093
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 711 FLAQTSHETTGG 676
FLAQTS ETTGG
Sbjct: 607 FLAQTSRETTGG 572
>gb|BE367523.1|BE367523 PI1_8_E06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 336 bits (727), Expect = 5e-091
Identities = 133/141 (94%), Positives = 135/141 (95%)
Frame = -2 / +3
Query: 567 AAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPK 388
AAGKKYYGRGPIQISYNYNYG AGQAIGAGILANPDLVA+DPTVSFETAVWFWMTPQSPK
Sbjct: 3 AAGKKYYGRGPIQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPK 182
Query: 387 PSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDL 208
PSCH VMTGQWTPS ADTAAGRLPGYGVVTNIINGGLECG GADSRVADRIGFYKRYCDL
Sbjct: 183 PSCHAVMTGQWTPSGADTAAGRLPGYGVVTNIINGGLECGKGADSRVADRIGFYKRYCDL 362
Query: 207 LGVSYGDNLDCANQTPFNG*L 145
LGVSYGDNLDCANQ PFN *+
Sbjct: 363 LGVSYGDNLDCANQKPFNS*I 425
Score = 143 bits (307), Expect(3) = 7e-048
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = +2 / -1
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAP PHSR G+LPAAVSA +GVH PVMT+WHDGLGDC
Sbjct: 349 RL*KPIRSATRLSAPLPHSRPPLMMLVTTPYPGNLPAAVSAPDGVHWPVMTAWHDGLGDC 170
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSNDTVGS ATRSGL
Sbjct: 169 GVIQNHTAVSNDTVGSDATRSGL 101
Score = 104 bits (222), Expect(2) = 1e-028
Identities = 50/89 (56%), Positives = 52/89 (58%)
Frame = +1 / -3
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVGXXXXXXXXXXXXXXXXXXXXXXXRQPAG 330
AVEG LVGAVQV+AVAD KQV V+ VEADPV RQP
Sbjct: 419 AVEGLLVGAVQVIAVADTKQVAVALVEADPVSDAAISAFAALEATIDDVSDNTIPRQPPR 240
Query: 331 GRVSRGGRPLPRHDVVARRLGRLRRHPEP 417
G VS RPL HD VARRLGRLRRHPEP
Sbjct: 239 GGVSSRRRPLAGHDGVARRLGRLRRHPEP 153
Score = 45.1 bits (92), Expect(3) = 7e-048
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2 / -1
Query: 512 L*L*DIWMGPRP*YFFPAA 568
L*L*+IWMGPRP*YFFPAA
Sbjct: 58 L*L*EIWMGPRP*YFFPAA 2
Score = 44.1 bits (90), Expect(2) = 1e-028
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +3 / -2
Query: 507 RSCSCRISGWARGRSTSSPRR 569
RSCSCR SGW GRSTSS RR
Sbjct: 63 RSCSCRRSGWVHGRSTSSRRR 1
Score = 42.8 bits (87), Expect(3) = 7e-048
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +3 / -2
Query: 150 SR*RASGWRSPSCRRS*PQASHSIVC 227
S *RASGWRSPS RRS* QAS S C
Sbjct: 420 SC*RASGWRSPSYRRS*HQASRSSAC 343
>gb|CW206618.1|CW206618 104_635_11187687_148_36965_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187687, DNA
sequence
Length = 587
Score = 264 bits (571), Expect(2) = 4e-087
Identities = 103/118 (87%), Positives = 105/118 (88%)
Frame = -2 / +2
Query: 912 TPNPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDV 733
TP+ G VASII ESLFNQMLLHRNDAACPANGFYTY+ FIAAANAFPGFGTTG D
Sbjct: 233 TPSSGGGGSVASIISESLFNQMLLHRNDAACPANGFYTYSAFIAAANAFPGFGTTGGADT 412
Query: 732 QKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGASGPDYCEPSAQWPCAAG 559
QKRELAAFLAQTSHETTGGWATAPDG YAWGYCFKEEQG ASGPDYCEPS QWPCAAG
Sbjct: 413 QKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAASGPDYCEPSTQWPCAAG 586
Score = 136 bits (291), Expect(3) = 6e-052
Identities = 59/70 (84%), Positives = 60/70 (85%)
Frame = +2 / -3
Query: 560 PAAHGHWALGSQ*SGPDAPPCSSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTS 739
PAAHGH LGSQ*SGPDA PCSSLKQ*PQA* PSGAVAHPPVVS +V ARNAASSRF S
Sbjct: 585 PAAHGHCVLGSQ*SGPDAAPCSSLKQ*PQA*APSGAVAHPPVVSCEVWARNAASSRFWVS 406
Query: 740 GAPVVPKPGN 769
PVVPKPGN
Sbjct: 405 APPVVPKPGN 376
Score = 79.9 bits (168), Expect(2) = 4e-087
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = -1 / +2
Query: 1054 ARAEQCGSQAGGALCPNCLCCSQFGWCGS 968
ARAEQCG+QAGGALCPNCLCCS+FGWCGS
Sbjct: 68 ARAEQCGTQAGGALCPNCLCCSKFGWCGS 154
Score = 62.0 bits (129), Expect(3) = 6e-052
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3 / -3
Query: 975 HHPNWLQHRQLGHSAPPACDPHCSARA 1055
HHPN LQ RQLG SAPPAC PHCSARA
Sbjct: 147 HHPNLLQQRQLGQSAPPACVPHCSARA 67
Score = 46.9 bits (96), Expect(3) = 6e-052
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / -3
Query: 818 GHAASLRCSSIWLKSDSGMMDATPP 892
GHAASLR SIWLK DS MMDAT P
Sbjct: 327 GHAASLRWRSIWLKRDSEMMDATLP 253
>gb|CF760116.1|CF760116 DSAF1_55_F11.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_55_F11_A011 5', mRNA sequence
Length = 527
Score = 305 bits (661), Expect = 7e-082
Identities = 121/129 (93%), Positives = 123/129 (95%)
Frame = -2 / +3
Query: 531 QISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWT 352
QISYNYNYG AGQAIGAGILANPDLVA+DPTVSFETAVWFWMTPQSPKPSCH VMTGQWT
Sbjct: 3 QISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQWT 182
Query: 351 PSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCA 172
PS ADTAAGRLPGYGVVTNIINGGLECG GADSRVADRIGFYKRYCDLLGVSYGDNLDCA
Sbjct: 183 PSGADTAAGRLPGYGVVTNIINGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCA 362
Query: 171 NQTPFNG*L 145
NQ PFN *+
Sbjct: 363 NQKPFNS*I 389
Score = 143 bits (307), Expect(3) = 3e-041
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = +2 / -2
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL*KPIRSATRLSAP PHSR G+LPAAVSA +GVH PVMT+WHDGLGDC
Sbjct: 313 RL*KPIRSATRLSAPLPHSRPPLMMLVTTPYPGNLPAAVSAPDGVHWPVMTAWHDGLGDC 134
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSNDTVGS ATRSGL
Sbjct: 133 GVIQNHTAVSNDTVGSDATRSGL 65
Score = 104 bits (222), Expect = 2e-021
Identities = 50/89 (56%), Positives = 52/89 (58%)
Frame = +1 / -1
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPVGXXXXXXXXXXXXXXXXXXXXXXXRQPAG 330
AVEG LVGAVQV+AVAD KQV V+ VEADPV RQP
Sbjct: 383 AVEGLLVGAVQVIAVADTKQVAVALVEADPVSDAAISAFAALEATIDDVSDNTIPRQPPR 204
Query: 331 GRVSRGGRPLPRHDVVARRLGRLRRHPEP 417
G VS RPL HD VARRLGRLRRHPEP
Sbjct: 203 GGVSSRRRPLAGHDGVARRLGRLRRHPEP 117
Score = 42.8 bits (87), Expect(3) = 3e-041
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +3 / -3
Query: 150 SR*RASGWRSPSCRRS*PQASHSIVC 227
S *RASGWRSPS RRS* QAS S C
Sbjct: 384 SC*RASGWRSPSYRRS*HQASRSSAC 307
Score = 22.6 bits (43), Expect(3) = 3e-041
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -3
Query: 507 RSCSCRISG 533
RSCSCR SG
Sbjct: 27 RSCSCRRSG 1
>gb|BE366378.1|BE366378 PI1_32_H10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 454
Score = 301 bits (651), Expect = 2e-080
Identities = 120/134 (89%), Positives = 124/134 (92%)
Frame = -2 / +1
Query: 546 GRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVM 367
GRGPIQISYNY YG AGQAIGAGILANPDLVA+DPTVSFETAVWFW+TPQSPKPSCH VM
Sbjct: 1 GRGPIQISYNYKYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWITPQSPKPSCHAVM 180
Query: 366 TGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGD 187
TGQ TPS ADT AGRLPGYGVVTNIINGGLECG GADSRV+DRIGFYKRYCDLLGV YGD
Sbjct: 181 TGQCTPSGADTPAGRLPGYGVVTNIINGGLECGKGADSRVSDRIGFYKRYCDLLGVRYGD 360
Query: 186 NLDCANQTPFNG*L 145
NLDCANQ PFN *+
Sbjct: 361 NLDCANQKPFNR*I 402
Score = 161 bits (347), Expect = 1e-038
Identities = 76/130 (58%), Positives = 80/130 (61%)
Frame = +2 / -3
Query: 155 LKGVWLAXXXXXXXXXXXXXXYRL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAA 334
LKG WLA RL* PIRS TRLSAP PHSR G+LPA
Sbjct: 392 LKGFWLAQSKLSPYLTPSKSQ*RL*NPIRSETRLSAPLPHSRPPLMMLVTTPYPGNLPAG 213
Query: 335 VSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGLXXXXXXXXXXXXXXL 514
VSA +GVH PVMT+WHDGLGDCGVIQN TAVSNDTVGS ATRSGL L
Sbjct: 212 VSAPDGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGLARMPAPMACPAAPYL 33
Query: 515 *L*DIWMGPR 544
*L*+IWMGPR
Sbjct: 32 *L*EIWMGPR 3
>gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_F07_A002 5', mRNA sequence
Length = 723
Score = 160 bits (343), Expect(2) = 2e-078
Identities = 56/86 (65%), Positives = 73/86 (84%)
Frame = -2 / +3
Query: 585 SAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
+ +WPC AG+ Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA DP V+F+TA+WFWM
Sbjct: 465 TTEWPCVAGESYHGRGPIQLSWNFNYGPAGQALGFDGLGNPEVVAGDPEVAFKTALWFWM 644
Query: 405 TPQSPKPSCHDVMTGQWTPSAADTAA 328
TP+SPKPSCHDVM G++ P+ AD AA
Sbjct: 645 TPRSPKPSCHDVMVGRYRPTDADVAA 722
Score = 155 bits (333), Expect(2) = 2e-078
Identities = 61/97 (62%), Positives = 70/97 (72%)
Frame = -2 / +3
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQKREL 718
S VASI+ E L++ M H++D ACPA+GFY Y F+ AA FP FG G +KRE+
Sbjct: 156 SKSRVASIVTEKLYSDMFKHKDDTACPAHGFYNYTSFLRAAERFPAFGGDGDAATRKREV 335
Query: 717 AAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
AAFLAQ SHETTGGWATAPDGPYAWG CFKEE AS
Sbjct: 336 AAFLAQISHETTGGWATAPDGPYAWGLCFKEEISPAS 446
Score = 78.0 bits (164), Expect(3) = 3e-035
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2 / -3
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPG 766
SSLKQ P A*GPSGAVAHPPVVS ++CARNAA+SRF + +P P G
Sbjct: 430 SSLKQSPHA*GPSGAVAHPPVVSCEICARNAATSRFRVAASPSPPNAG 287
Score = 73.0 bits (153), Expect(3) = 3e-035
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = +2 / -3
Query: 329 AAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
AA SA+ G + P MTSWHDGLGD GVIQN +AV N T GS AT SGL
Sbjct: 721 AATSASVGRYRPTMTSWHDGLGDLGVIQNHSAVLNATSGSPATTSGL 581
Score = 37.7 bits (76), Expect(3) = 3e-035
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2 / -3
Query: 524 DIWMGPRP*YFFPAAHGH 577
D WMGPRP Y PA HGH
Sbjct: 526 DSWMGPRPWYDSPATHGH 473
>gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_56_F03_A002 5', mRNA sequence
Length = 805
Score = 160 bits (344), Expect(2) = 9e-077
Identities = 62/100 (62%), Positives = 73/100 (73%)
Frame = -2 / +1
Query: 906 NPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQK 727
NP + VA+++ E L+N + LH++DAACPA GFYTYA FI AA FP F TG +K
Sbjct: 226 NPAAPAPVATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRK 405
Query: 726 RELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
RE+AAF AQ SHETTGGWATAPDG YAWG C+KEE AS
Sbjct: 406 REVAAFFAQISHETTGGWATAPDGQYAWGLCYKEEISPAS 525
Score = 149 bits (319), Expect(2) = 9e-077
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = -2 / +1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTP 400
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA +F TA+WFWMTP
Sbjct: 550 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTP 729
Query: 399 QSPKPSCHDVMTGQWTPSAADTAA 328
+ PKPSCH+VM G++ P+AAD AA
Sbjct: 730 RRPKPSCHEVMVGEYRPTAADAAA 801
Score = 64.8 bits (135), Expect(3) = 3e-023
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = +2 / -3
Query: 329 AAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
AA SAA G + P MTSWHDGLG GVIQN +AV N +AT SGL
Sbjct: 800 AAASAAVGRYSPTMTSWHDGLGRRGVIQNHSAVRNAVSEQLATTSGL 660
Score = 53.3 bits (110), Expect(3) = 3e-023
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +2 / -3
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
SSL P A PSGAVA PPVVS ++CA+ AA+SR +PV GN
Sbjct: 509 SSL*HRPHAYCPSGAVAQPPVVS*EICAKKAATSRLRVLRSPVAANLGN 363
Score = 29.9 bits (59), Expect(3) = 3e-023
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2 / -3
Query: 524 DIWMGPRP*YFFPAAHGH 577
D WMGPRP P HGH
Sbjct: 605 DSWMGPRPW*DLPG*HGH 552
>gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_A10_A002 5', mRNA sequence
Length = 693
Score = 183 bits (394), Expect(3) = 5e-076
Identities = 67/91 (73%), Positives = 78/91 (85%)
Frame = -2 / +3
Query: 552 YYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHD 373
YYGRGPIQ+++ YNY AGQA+ ++ NPDLV++DP V+F+TA+WFWMTPQSPKPSCH
Sbjct: 420 YYGRGPIQLTHEYNYRQAGQALNLNLVGNPDLVSSDPVVAFKTAIWFWMTPQSPKPSCHA 599
Query: 372 VMTGQWTPSAADTAAGRLPGYGVVTNIINGG 280
VMTG WTPSA D AAGRLPGYGV TNIINGG
Sbjct: 600 VMTGSWTPSADDRAAGRLPGYGVTTNIINGG 692
Score = 111 bits (238), Expect(3) = 5e-076
Identities = 44/71 (61%), Positives = 49/71 (69%)
Frame = -2 / +3
Query: 807 FYTYAGFIAAANAFPGFGTTGAPDVQKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFK 628
F TY FI AA+ FPGFGTTG ++RELAAF QTSHETTGGW TAP G +AWGYC
Sbjct: 213 FCTYDAFIEAASKFPGFGTTGDDQTRRRELAAFFGQTSHETTGGWPTAPGGQFAWGYCRV 392
Query: 627 EEQGGASGPDY 595
+EQ P Y
Sbjct: 393 KEQNPTDPPYY 425
Score = 91.8 bits (194), Expect(2) = 8e-035
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = +2 / -3
Query: 317 GSLPAAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
GSLPAA S+AEGV PVMT+WHDG GDCGVIQNQ AV T GS+ TRSGL
Sbjct: 655 GSLPAARSSAEGVQLPVMTAWHDGFGDCGVIQNQMAVLKATTGSLDTRSGL 503
Score = 80.3 bits (169), Expect(2) = 8e-035
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -3
Query: 620 CSSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
CS +Q PQA P GAV HPPVVSWDVC + AASSR +PVVPKPGN
Sbjct: 400 CSFTRQYPQANCPPGAVGHPPVVSWDVCPKKAASSRLRVWSSPVVPKPGN 251
Score = 30.9 bits (61), Expect(3) = 5e-076
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 888 GVASIIPESLFNQMLLHRNDAAC 820
GV SII +F ML HR D+ C
Sbjct: 135 GVWSIITRPMFQSMLSHRGDSGC 203
>gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c05, DNA
sequence
Length = 718
Score = 160 bits (344), Expect(2) = 3e-075
Identities = 62/100 (62%), Positives = 73/100 (73%)
Frame = -2 / +3
Query: 906 NPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQK 727
NP + VA+++ E L+N + LH++DAACPA GFYTYA FI AA FP F TG +K
Sbjct: 141 NPAAPAPVATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRK 320
Query: 726 RELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
RE+AAF AQ SHETTGGWATAPDG YAWG C+KEE AS
Sbjct: 321 REVAAFFAQISHETTGGWATAPDGQYAWGLCYKEEISPAS 440
Score = 144 bits (308), Expect(2) = 3e-075
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTP 400
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA +F TA+WFWMTP
Sbjct: 465 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTP 644
Query: 399 QSPKPSCHDVMTGQWTPSAADTAA 328
+ PKPS H+VM G++ P+AAD AA
Sbjct: 645 RRPKPSWHEVMVGEYRPTAADAAA 716
Score = 58.8 bits (122), Expect(3) = 2e-021
Identities = 28/47 (59%), Positives = 31/47 (65%)
Frame = +2 / -1
Query: 329 AAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
AA SAA G + P MTS HDGLG GVIQN +AV N +AT SGL
Sbjct: 715 AAASAAVGRYSPTMTSCHDGLGRRGVIQNHSAVRNAVSEQLATTSGL 575
Score = 53.3 bits (110), Expect(3) = 2e-021
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +2 / -1
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
SSL P A PSGAVA PPVVS ++CA+ AA+SR +PV GN
Sbjct: 424 SSL*HRPHAYCPSGAVAQPPVVS*EICAKKAATSRLRVLRSPVAANLGN 278
Score = 29.9 bits (59), Expect(3) = 2e-021
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2 / -1
Query: 524 DIWMGPRP*YFFPAAHGH 577
D WMGPRP P HGH
Sbjct: 520 DSWMGPRPW*DLPG*HGH 467
>gb|CW470070.1|CW470070 fsbb001f223b16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f223b16, DNA
sequence
Length = 452
Score = 280 bits (606), Expect = 3e-074
Identities = 110/117 (94%), Positives = 111/117 (94%)
Frame = -2 / -1
Query: 504 PAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAAG 325
P GQAIGAGILANPDLVA D TVS ETAVWFWMTPQSPKPSCHDVMTGQWTPSAAD AAG
Sbjct: 452 PPGQAIGAGILANPDLVAADATVSLETAVWFWMTPQSPKPSCHDVMTGQWTPSAADIAAG 273
Query: 324 RLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQTPFN 154
RLPGYGVVTNIINGGLECGHGAD+RVADRIGFYKRYCDLLGVSYGDNLDCANQ PFN
Sbjct: 272 RLPGYGVVTNIINGGLECGHGADTRVADRIGFYKRYCDLLGVSYGDNLDCANQMPFN 102
Score = 146 bits (314), Expect(2) = 1e-045
Identities = 61/83 (73%), Positives = 66/83 (79%)
Frame = +2 / +1
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDGLGDC 400
RL* PI SATR+SAPWPHSR G+LPAA+SAA+GVHCPVMTSWHDGLGDC
Sbjct: 169 RL*NPILSATRVSAPWPHSRPPLMMLVTTPYPGNLPAAMSAADGVHCPVMTSWHDGLGDC 348
Query: 401 GVIQNQTAVSNDTVGSVATRSGL 469
GVIQN TAVSN+TV S ATRSGL
Sbjct: 349 GVIQNHTAVSNETVASAATRSGL 417
Score = 58.8 bits (122), Expect(2) = 1e-045
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPV 243
AVEG LVGAVQVVA+ADPKQV V+ VE DPV
Sbjct: 99 AVEGHLVGAVQVVAIADPKQVAVALVEPDPV 191
>gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072j20, DNA
sequence
Length = 694
Score = 203 bits (437), Expect(3) = 3e-073
Identities = 77/97 (79%), Positives = 88/97 (90%)
Frame = -2 / +1
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQKREL 718
+ G VASII ESLFNQMLLHRN ACPA+GFYTY+ F+AAAN+FPGFGTTG+PD QKRE+
Sbjct: 193 AGGSVASIISESLFNQMLLHRNKPACPASGFYTYSAFVAAANSFPGFGTTGSPDAQKREV 372
Query: 717 AAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
AAFLAQTSHETTGGWA+APDGPYAWGYC+KEE+ A+
Sbjct: 373 AAFLAQTSHETTGGWASAPDGPYAWGYCYKEEKDAAA 483
Score = 100 bits (213), Expect(2) = 1e-028
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -2 / +1
Query: 651 YAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGA 481
+ + Y +++ ++ YC PSA WPCAAGKKYYGRGPIQISYNYNYGPAG+AIGA
Sbjct: 445 WGYCYKEEKDAAASAPEAYCRPSALWPCAAGKKYYGRGPIQISYNYNYGPAGEAIGA 615
Score = 95.5 bits (202), Expect(4) = 5e-048
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2 / -3
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
SSL Q*PQA*GPSGA AHPPVVS DVCARNAA+SRF SG PVVPKPGN
Sbjct: 467 SSL*Q*PQA*GPSGADAHPPVVSCDVCARNAATSRFWASGLPVVPKPGN 321
Score = 62.5 bits (130), Expect(4) = 5e-048
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2 / -3
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*S 601
L*L*+IWMGPRP*YFFPAAHGH ALG Q*+
Sbjct: 584 L*L*EIWMGPRP*YFFPAAHGHSALGLQ*A 495
Score = 58.8 bits (122), Expect(3) = 3e-073
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -2 / +1
Query: 483 AGILANPDLVATDPTVSFETAVWFWM 406
AGIL +PDLVATD TVSFETAVWFWM
Sbjct: 616 AGILDDPDLVATDATVSFETAVWFWM 693
Score = 54.7 bits (113), Expect(3) = 3e-073
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1 / +3
Query: 577 VAVRRGEEVLRPRAHPDILQLQLRA 503
VAVRR EEVLRPRAHPD+LQLQLRA
Sbjct: 519 VAVRRREEVLRPRAHPDLLQLQLRA 593
Score = 50.6 bits (104), Expect(2) = 1e-028
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -1 / +3
Query: 916 QHPEPAEQRRRGVHHPRVALQPDAAAPQRRGVP 818
+H +R+RGVHH RV+LQPDAAAPQ+ VP
Sbjct: 174 RHVHEHRRRQRGVHHLRVSLQPDAAAPQQARVP 272
Score = 49.6 bits (102), Expect(4) = 5e-048
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / -3
Query: 818 GHAASLRCSSIWLKSDSGMMDATPP 892
GHA LRCSSIWLK DS MMDAT P
Sbjct: 272 GHAGLLRCSSIWLKRDSEMMDATLP 198
Score = 42.3 bits (86), Expect(4) = 5e-048
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2 / -3
Query: 407 IQNQTAVSNDTVGSVATRSG 466
IQNQTAVSN+TV SVATRSG
Sbjct: 692 IQNQTAVSNETVASVATRSG 633
>gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c05, DNA
sequence
Length = 746
Score = 236 bits (509), Expect(2) = 7e-073
Identities = 86/141 (60%), Positives = 109/141 (77%)
Frame = -2 / -1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTP 400
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA +F TA+WFWMTP
Sbjct: 638 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTP 459
Query: 399 QSPKPSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKR 220
+ PKPSCH+VM G++ P+AAD AA R G+G+VTNI+NGGLEC D+RV +RIGFY+R
Sbjct: 458 RRPKPSCHEVMVGEYRPTAADAAANRTAGFGLVTNIVNGGLECNRTDDARVNNRIGFYQR 279
Query: 219 YCDLLGVSYGDNLDCANQTPF 157
YC + V G NLDCA+Q P+
Sbjct: 278 YCQIFNVDAGANLDCAHQQPY 216
Score = 60.6 bits (126), Expect(2) = 7e-073
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 690 ETTGGWATAPDGPYAWGYCFKEEQGGAS 607
ETTGGWATAPDG YAWG C+KEE AS
Sbjct: 746 ETTGGWATAPDGQYAWGLCYKEEISPAS 663
>gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_F08_A002 5', mRNA sequence
Length = 740
Score = 160 bits (344), Expect(2) = 9e-069
Identities = 62/100 (62%), Positives = 73/100 (73%)
Frame = -2 / +3
Query: 906 NPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQK 727
NP + VA+++ E L+N + LH++DAACPA GFYTYA FI AA FP F TG +K
Sbjct: 216 NPAAPAPVATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRK 395
Query: 726 RELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
RE+AAF AQ SHETTGGWATAPDG YAWG C+KEE AS
Sbjct: 396 REVAAFFAQISHETTGGWATAPDGQYAWGLCYKEEISPAS 515
Score = 122 bits (261), Expect(2) = 9e-069
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTP 400
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA +F TA+WFWMTP
Sbjct: 540 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTP 719
Query: 399 QSPKPSC 379
+ PKPSC
Sbjct: 720 RRPKPSC 740
>gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_56_F03_A002 3', mRNA sequence
Length = 599
Score = 236 bits (509), Expect(2) = 2e-066
Identities = 86/141 (60%), Positives = 109/141 (77%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTP 400
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA +F TA+WFWMTP
Sbjct: 87 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTP 266
Query: 399 QSPKPSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKR 220
+ PKPSCH+VM G++ P+AAD AA R G+G+VTNI+NGGLEC D+RV +RIGFY+R
Sbjct: 267 RRPKPSCHEVMVGEYRPTAADAAANRTAGFGLVTNIVNGGLECNRTDDARVNNRIGFYQR 446
Query: 219 YCDLLGVSYGDNLDCANQTPF 157
YC + V G NLDCA+Q P+
Sbjct: 447 YCQIFNVDAGANLDCAHQQPY 509
Score = 39.1 bits (79), Expect(2) = 2e-066
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / +3
Query: 666 APDGPYAWGYCFKEEQGGAS 607
APDG YAWG C+KEE AS
Sbjct: 3 APDGQYAWGLCYKEEISPAS 62
>gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_F08_A002 3', mRNA sequence
Length = 632
Score = 230 bits (496), Expect(2) = 1e-063
Identities = 85/141 (60%), Positives = 108/141 (76%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTP 400
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA +F TA+ FWMTP
Sbjct: 84 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALCFWMTP 263
Query: 399 QSPKPSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKR 220
+ PKPSCH+VM G++ P+AAD AA R G+G+VTNI+NGGLEC D+RV +RIGFY+R
Sbjct: 264 RRPKPSCHEVMVGEYRPTAADAAANRTAGFGLVTNIVNGGLECNRTDDARVNNRIGFYQR 443
Query: 219 YCDLLGVSYGDNLDCANQTPF 157
YC + V G NLDCA+Q P+
Sbjct: 444 YCQIFNVDAGANLDCAHQQPY 506
Score = 35.9 bits (72), Expect(2) = 1e-063
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 663 PDGPYAWGYCFKEE 622
PDG YAWG C+KEE
Sbjct: 3 PDGQYAWGLCYKEE 44
>gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232237, DNA
sequence
Length = 662
Score = 174 bits (374), Expect(4) = 3e-063
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = -2 / +2
Query: 534 IQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQW 355
+++ YNY AGQA+ ++ NPDLV++DP V+F+TA+WFWMTPQSPKPSCH VMTG W
Sbjct: 221 LRVRSEYNYRQAGQALNLNLVGNPDLVSSDPVVAFKTAIWFWMTPQSPKPSCHAVMTGSW 400
Query: 354 TPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVA 244
TPSA D AAGRLPGYGV TNIINGG+ECG G + A
Sbjct: 401 TPSADDRAAGRLPGYGVTTNIINGGMECGKGQSTDAA 511
Score = 55.1 bits (114), Expect(4) = 3e-063
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = -2 / +2
Query: 243 DRIGFYKRYCDLLGVSYGDNLDCANQTPFNG* 148
DR+G+YKRY D+L V YGDN+ C +Q P+ G*
Sbjct: 515 DRVGYYKRYSDMLRVRYGDNIACKDQKPYGG* 610
Score = 46.4 bits (95), Expect(4) = 3e-063
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / +2
Query: 681 GGWATAPDGPYAWGYCFKEEQGGASGPDY 595
GGW TAP G +AWGYC +EQ P Y
Sbjct: 5 GGWPTAPGGQFAWGYCRVKEQNPTDPPYY 91
Score = 25.8 bits (50), Expect(4) = 3e-063
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 552 YYGRGPIQIS 523
YYGRGPIQ++
Sbjct: 86 YYGRGPIQLT 115
>gb|BE594394.1|BE594394 PI1_32_H10.b2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 182 bits (391), Expect(2) = 2e-062
Identities = 74/86 (86%), Positives = 76/86 (88%)
Frame = -2 / +2
Query: 912 TPNPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDV 733
TP+ G VASII ESLFNQMLLHRNDAACPANGFYTY+ FIAAANAFPGFGTTG D
Sbjct: 314 TPSSGGGGSVASIISESLFNQMLLHRNDAACPANGFYTYSAFIAAANAFPGFGTTGGADT 493
Query: 732 QKRELAAFLAQTSHETTGGWATAPDG 655
QKRELAAFLAQTSHETTGGWATAPDG
Sbjct: 494 QKRELAAFLAQTSHETTGGWATAPDG 571
Score = 79.9 bits (168), Expect(2) = 2e-062
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = -1 / +2
Query: 1054 ARAEQCGSQAGGALCPNCLCCSQFGWCGS 968
ARAEQCG+QAGGALCPNCLCCS+FGWCGS
Sbjct: 149 ARAEQCGTQAGGALCPNCLCCSKFGWCGS 235
Score = 73.5 bits (154), Expect(3) = 2e-033
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +2 / -2
Query: 656 PSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
PSGAVAHPPVVS +V ARNAASSRF S PVVPKPGN
Sbjct: 570 PSGAVAHPPVVSCEVWARNAASSRFWVSAPPVVPKPGN 457
Score = 62.0 bits (129), Expect(3) = 2e-033
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3 / -2
Query: 975 HHPNWLQHRQLGHSAPPACDPHCSARA 1055
HHPN LQ RQLG SAPPAC PHCSARA
Sbjct: 228 HHPNLLQQRQLGQSAPPACVPHCSARA 148
Score = 46.9 bits (96), Expect(3) = 2e-033
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / -2
Query: 818 GHAASLRCSSIWLKSDSGMMDATPP 892
GHAASLR SIWLK DS MMDAT P
Sbjct: 408 GHAASLRWRSIWLKRDSEMMDATLP 334
>gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405587, DNA
sequence
Length = 582
Score = 203 bits (437), Expect(2) = 3e-061
Identities = 77/97 (79%), Positives = 88/97 (90%)
Frame = -2 / -2
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQKREL 718
+ G VASII ESLFNQMLLHRN ACPA+GFYTY+ F+AAAN+FPGFGTTG+PD QKRE+
Sbjct: 443 AGGSVASIISESLFNQMLLHRNKPACPASGFYTYSAFVAAANSFPGFGTTGSPDAQKREV 264
Query: 717 AAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
AAFLAQTSHETTGGWA+APDGPYAWGYC+KEE+ A+
Sbjct: 263 AAFLAQTSHETTGGWASAPDGPYAWGYCYKEEKDAAA 153
Score = 100 bits (213), Expect(2) = 1e-028
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -2 / -2
Query: 651 YAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGA 481
+ + Y +++ ++ YC PSA WPCAAGKKYYGRGPIQISYNYNYGPAG+AIGA
Sbjct: 191 WGYCYKEEKDAAASAPEAYCRPSALWPCAAGKKYYGRGPIQISYNYNYGPAGEAIGA 21
Score = 95.5 bits (202), Expect(3) = 8e-041
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2 / +1
Query: 623 SSLKQ*PQA*GPSGAVAHPPVVSWDVCARNAASSRFCTSGAPVVPKPGN 769
SSL Q*PQA*GPSGA AHPPVVS DVCARNAA+SRF SG PVVPKPGN
Sbjct: 169 SSL*Q*PQA*GPSGADAHPPVVSCDVCARNAATSRFWASGLPVVPKPGN 315
Score = 62.5 bits (130), Expect(3) = 8e-041
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2 / +1
Query: 512 L*L*DIWMGPRP*YFFPAAHGHWALGSQ*S 601
L*L*+IWMGPRP*YFFPAAHGH ALG Q*+
Sbjct: 52 L*L*EIWMGPRP*YFFPAAHGHSALGLQ*A 141
Score = 54.7 bits (113), Expect(2) = 3e-061
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1 / -1
Query: 577 VAVRRGEEVLRPRAHPDILQLQLRA 503
VAVRR EEVLRPRAHPD+LQLQLRA
Sbjct: 117 VAVRRREEVLRPRAHPDLLQLQLRA 43
Score = 50.6 bits (104), Expect(2) = 1e-028
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -1 / -1
Query: 916 QHPEPAEQRRRGVHHPRVALQPDAAAPQRRGVP 818
+H +R+RGVHH RV+LQPDAAAPQ+ VP
Sbjct: 462 RHVHEHRRRQRGVHHLRVSLQPDAAAPQQARVP 364
Score = 49.6 bits (102), Expect(3) = 8e-041
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 818 GHAASLRCSSIWLKSDSGMMDATPP 892
GHA LRCSSIWLK DS MMDAT P
Sbjct: 364 GHAGLLRCSSIWLKRDSEMMDATLP 438
>gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 655
Score = 196 bits (423), Expect(2) = 2e-059
Identities = 72/103 (69%), Positives = 85/103 (82%)
Frame = -2 / +3
Query: 552 YYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHD 373
YYGRGPIQ+++ YNY AGQA+ ++ NPDLV++DP V+F+TA+WFWMTPQSPKPSCH
Sbjct: 39 YYGRGPIQLTHEYNYRQAGQALNLNLVGNPDLVSSDPVVAFKTAIWFWMTPQSPKPSCHA 218
Query: 372 VMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVA 244
VMTG WTPSA D AAGRLPGYGV TNIINGG+ECG G + A
Sbjct: 219 VMTGSWTPSADDRAAGRLPGYGVTTNIINGGMECGKGQSTDAA 347
Score = 55.1 bits (114), Expect(2) = 2e-059
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = -2 / +3
Query: 243 DRIGFYKRYCDLLGVSYGDNLDCANQTPFNG* 148
DR+G+YKRY D+L V YGDN+ C +Q P+ G*
Sbjct: 351 DRVGYYKRYSDMLRVRYGDNIACKDQKPYGG* 446
>gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 708
Score = 133 bits (285), Expect(2) = 2e-059
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = -2 / +2
Query: 519 NYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAA 340
NYNYGPAG+AIG +L NPDLVATDP VSF+TA+WFWMT + KPSCH V+TGQWTP+AA
Sbjct: 101 NYNYGPAGRAIGVDLLNNPDLVATDPVVSFKTALWFWMTARDNKPSCHAVITGQWTPTAA 280
Query: 339 DTAAGR 322
D AAGR
Sbjct: 281 DRAAGR 298
Score = 117 bits (251), Expect(2) = 2e-059
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = -2 / +2
Query: 318 PGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQTPFN 154
PGYGV+TNIINGG+ECGHGAD RV DRIGFYKRYCD+ + YG NLDC Q PFN
Sbjct: 305 PGYGVITNIINGGIECGHGADPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFN 469
Score = 85.4 bits (180), Expect(3) = 5e-025
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +2 / -1
Query: 326 PAAVSAAEGVHCPVMTSWHDGLGDCGVIQNQTAVSNDTVGSVATRSGL 469
PAA+SAA GVHCPV+T+WHDGL VIQN +AV DT GSVATRSGL
Sbjct: 294 PAALSAAVGVHCPVITAWHDGLLSLAVIQNHSAVLKDTTGSVATRSGL 151
Score = 34.5 bits (69), Expect(3) = 5e-025
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1 / -3
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPV 243
A+E L AV+V VAD + + V+ VE DPV
Sbjct: 472 AIERPLAVAVEVAPVADAEDIAVALVEPDPV 380
Score = 34.1 bits (68), Expect(3) = 5e-025
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2 / -1
Query: 221 RL*KPIRSATRLSAPWPHS 277
RL* PIRS TR SAP PHS
Sbjct: 402 RL*NPIRSVTRGSAPCPHS 346
>gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230799, DNA
sequence
Length = 583
Score = 225 bits (486), Expect = 9e-058
Identities = 81/128 (63%), Positives = 105/128 (82%)
Frame = -2 / -2
Query: 585 SAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
+ +WPC AG+ Y+GRGPIQ+S+N+NYGPAGQA+G L NP++VA DP V+F+TA+WFWM
Sbjct: 528 TTEWPCVAGESYHGRGPIQLSWNFNYGPAGQALGFDGLGNPEVVAGDPEVAFKTALWFWM 349
Query: 405 TPQSPKPSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFY 226
TP+SPKPSCHDVM G++ P+ AD AA R G+G+ TNIINGG+ECG +V DRIGF+
Sbjct: 348 TPRSPKPSCHDVMVGRYRPTDADVAANRTAGFGLTTNIINGGIECGKTGVPQVDDRIGFF 169
Query: 225 KRYCDLLG 202
+RYC+LLG
Sbjct: 168 RRYCELLG 145
>gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_D07_A002 5', mRNA sequence
Length = 683
Score = 160 bits (344), Expect(2) = 4e-055
Identities = 62/100 (62%), Positives = 73/100 (73%)
Frame = -2 / +3
Query: 906 NPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQK 727
NP + VA+++ E L+N + LH++DAACPA GFYTYA FI AA FP F TG +K
Sbjct: 243 NPAAPAPVATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRK 422
Query: 726 RELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGAS 607
RE+AAF AQ SHETTGGWATAPDG YAWG C+KEE AS
Sbjct: 423 REVAAFFAQISHETTGGWATAPDGQYAWGLCYKEEISPAS 542
Score = 76.7 bits (161), Expect(2) = 4e-055
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANP 463
QWPC GK Y+GRGPIQ+S+N+NYGPAGQA+G L NP
Sbjct: 567 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQALGFDGLRNP 683
>gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805558, DNA
sequence
Length = 680
Score = 198 bits (427), Expect = 1e-049
Identities = 73/124 (58%), Positives = 95/124 (76%)
Frame = -2 / +3
Query: 528 ISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTP 349
+S+N+NYGPAGQA+G L NP++VA +F TA+WFWMTP+ PKPSCH+VM G++ P
Sbjct: 3 LSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTPRRPKPSCHEVMVGEYRP 182
Query: 348 SAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCAN 169
+AAD AA R G+G+VTNI+NGGLEC D+RV +RIGFY+RYC + V G NLDCA+
Sbjct: 183 TAADAAANRTAGFGLVTNIVNGGLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAH 362
Query: 168 QTPF 157
Q P+
Sbjct: 363 QQPY 374
>gb|CW307371.1|CW307371 104_795_11468105_116_35728_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468105, DNA
sequence
Length = 642
Score = 195 bits (420), Expect = 1e-048
Identities = 75/78 (96%), Positives = 76/78 (97%)
Frame = -2 / -2
Query: 387 PSCHDVMTGQWTPSAADTAAGRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDL 208
PSCHDVMTGQWTPSAAD AAGRLPGYGVVTNIINGGLECGHGAD+RVADRIGFYKRYCDL
Sbjct: 641 PSCHDVMTGQWTPSAADIAAGRLPGYGVVTNIINGGLECGHGADTRVADRIGFYKRYCDL 462
Query: 207 LGVSYGDNLDCANQTPFN 154
LGVSYGDNLDCANQ PFN
Sbjct: 461 LGVSYGDNLDCANQMPFN 408
Score = 93.6 bits (198), Expect(2) = 9e-030
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +2 / +1
Query: 221 RL*KPIRSATRLSAPWPHSRXXXXXXXXXXXXGSLPAAVSAAEGVHCPVMTSWHDG 388
RL* PI SATR+SAPWPHSR G+LPAA+SAA+GVHCPVMTSWHDG
Sbjct: 475 RL*NPILSATRVSAPWPHSRPPLMMLVTTPYPGNLPAAMSAADGVHCPVMTSWHDG 642
Score = 58.8 bits (122), Expect(2) = 9e-030
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 151 AVEGRLVGAVQVVAVADPKQVTVSFVEADPV 243
AVEG LVGAVQVVA+ADPKQV V+ VE DPV
Sbjct: 405 AVEGHLVGAVQVVAIADPKQVAVALVEPDPV 497
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds
Length = 789
Score = 114 bits (243), Expect(5) = 1e-046
Identities = 40/57 (70%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+AIG LANP+ VA D ++F+TA+W+W
Sbjct: 445 QWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTALWYW 615
Score = 55.6 bits (115), Expect(5) = 1e-046
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -2 / +1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC LGV G NL C
Sbjct: 646 GFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC 786
Score = 36.8 bits (74), Expect(5) = 1e-046
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2 / +1
Query: 915 STPNPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S+ + S GG + F + ++ + C FYT + F++AAN++ FG
Sbjct: 157 SSGSSSSGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 318
Score = 28.1 bits (55), Expect(5) = 1e-046
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1 / +1
Query: 1060 VPARAEQCGSQAGGALCPNCLCCSQFGWCG 971
VPA A+ CG QAG C + +CG
Sbjct: 40 VPAAAQNCGCQAGYCCSKFGYCGTTDDYCG 129
Score = 27.6 bits (54), Expect(5) = 1e-046
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 337 KREIAAFFAHVTHET 381
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds
Length = 819
Score = 114 bits (243), Expect(5) = 3e-046
Identities = 40/57 (70%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+AIG LANP+ VA D ++F+TA+W+W
Sbjct: 475 QWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTALWYW 645
Score = 54.7 bits (113), Expect(5) = 3e-046
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -2 / +1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC LGV G NL C
Sbjct: 676 GFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLIC 816
Score = 36.8 bits (74), Expect(5) = 3e-046
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2 / +1
Query: 915 STPNPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S+ + S GG + F + ++ + C FYT + F++AAN++ FG
Sbjct: 187 SSGSSSSGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 348
Score = 28.1 bits (55), Expect(5) = 3e-046
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1 / +1
Query: 1060 VPARAEQCGSQAGGALCPNCLCCSQFGWCG 971
VPA A+ CG QAG C + +CG
Sbjct: 70 VPAAAQNCGCQAGYCCSKFGYCGTTDDYCG 159
Score = 27.6 bits (54), Expect(5) = 3e-046
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 367 KREIAAFFAHVTHET 411
>gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_D07_A002 3', mRNA sequence
Length = 635
Score = 184 bits (397), Expect = 2e-045
Identities = 69/117 (58%), Positives = 88/117 (75%)
Frame = -2 / +1
Query: 507 GPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAA 328
GPAGQA+G L NP++VA +F TA+WFWMTP+ PKPSCH+VM G++ P+AAD AA
Sbjct: 4 GPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTPRRPKPSCHEVMVGEYRPTAADAAA 183
Query: 327 GRLPGYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQTPF 157
R G+G+VTNI+NGGLEC D+RV +RIGFY+RYC + V G NLDCA+Q P+
Sbjct: 184 NRTAGFGLVTNIVNGGLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAHQQPY 354
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds
Length = 922
Score = 114 bits (243), Expect(5) = 2e-044
Identities = 40/57 (70%), Positives = 50/57 (87%)
Frame = -2 / +2
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+AIG LANP+ VA D ++F+TA+W+W
Sbjct: 578 QWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTALWYW 748
Score = 55.6 bits (115), Expect(5) = 2e-044
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -2 / +2
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC LGV G NL C
Sbjct: 779 GFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC 919
Score = 36.8 bits (74), Expect(5) = 2e-044
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2 / +1
Query: 915 STPNPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S+ + S GG + F + ++ + C FYT + F++AAN++ FG
Sbjct: 157 SSGSSSSGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 318
Score = 28.1 bits (55), Expect(5) = 2e-044
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1 / +1
Query: 1060 VPARAEQCGSQAGGALCPNCLCCSQFGWCG 971
VPA A+ CG QAG C + +CG
Sbjct: 40 VPAAAQNCGCQAGYCCSKFGYCGTTDDYCG 129
Score = 27.6 bits (54), Expect(5) = 2e-044
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 337 KREIAAFFAHVTHET 381
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds
Length = 922
Score = 112 bits (239), Expect(5) = 6e-044
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -2 / +2
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+ IG L NPD VA D ++F+TA+WFW
Sbjct: 578 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVIAFKTALWFW 748
Score = 55.1 bits (114), Expect(5) = 6e-044
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2 / +2
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+Y++YC LGV G NL C
Sbjct: 779 GFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC 919
Score = 37.3 bits (75), Expect(5) = 6e-044
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2 / +1
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S GG + + F + ++ C FYT + F++AA+A+ GFG
Sbjct: 172 SGGGNVASVVTDAFFNGIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 315
Score = 28.1 bits (55), Expect(5) = 6e-044
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 1012 CPNCLCCSQFGWCGS 968
C CCS+FG+CG+
Sbjct: 67 CQAGYCCSKFGYCGT 111
Score = 27.6 bits (54), Expect(5) = 6e-044
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 334 KREIAAFFAHVTHET 378
>gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 5', mRNA sequence
Length = 837
Score = 112 bits (240), Expect(5) = 2e-043
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -2 / +2
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+ IG L NPD VA D V+F+TA+WFW
Sbjct: 521 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTALWFW 691
Score = 44.1 bits (90), Expect(5) = 2e-043
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2 / +2
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLG 202
G+G ING LEC +++ R+G+Y++YC LG
Sbjct: 722 GFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLG 835
Score = 37.3 bits (75), Expect(5) = 2e-043
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2 / +2
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S GG + + F + ++ C FYT + F++AA+A+ GFG
Sbjct: 251 SGGGNVAGVVTDAFFNSIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 394
Score = 30.4 bits (60), Expect(5) = 2e-043
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1 / +2
Query: 1039 CGSQAGGALCPNCLCCSQFGWCGS 968
C + A C CCS+FG+CG+
Sbjct: 119 CAAAAQNYGCQAGYCCSKFGYCGT 190
Score = 27.2 bits (53), Expect(5) = 2e-043
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 413 KREIAAFFAHITHET 457
>gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 737
Score = 116 bits (248), Expect(3) = 6e-043
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
QWPCAAG+KYYGRGP+QIS+NYNYGPAGQ+IG L NPD VA D ++F+ A+WFWM
Sbjct: 190 QWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAALWFWM 363
Score = 56.1 bits (116), Expect(3) = 6e-043
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -2 / +1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC GV G NL C
Sbjct: 391 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC 531
Score = 42.3 bits (86), Expect(3) = 6e-043
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2 / +1
Query: 783 AAANAFPGFGTTGAPDVQKRELAAFLAQTSHET 685
A+A+A+ GF G+ D KRE+AAF A +HET
Sbjct: 28 ASASAYSGFAQGGSEDDGKREIAAFFAHATHET 126
>gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 3', mRNA sequence
Length = 722
Score = 116 bits (248), Expect(3) = 6e-043
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
QWPCAAG+KYYGRGP+QIS+NYNYGPAGQ+IG L NPD VA D ++F+ A+WFWM
Sbjct: 168 QWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAALWFWM 341
Score = 56.1 bits (116), Expect(3) = 6e-043
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -2 / +3
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC GV G NL C
Sbjct: 369 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC 509
Score = 42.3 bits (86), Expect(3) = 6e-043
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2 / +3
Query: 783 AAANAFPGFGTTGAPDVQKRELAAFLAQTSHET 685
A+A+A+ GF G+ D KRE+AAF A +HET
Sbjct: 6 ASASAYSGFAQGGSEDDGKREIAAFFAHATHET 104
>gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 3', mRNA sequence
Length = 714
Score = 116 bits (248), Expect(3) = 6e-043
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
QWPCAAG+KYYGRGP+QIS+NYNYGPAGQ+IG L NPD VA D ++F+ A+WFWM
Sbjct: 318 QWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAALWFWM 491
Score = 56.1 bits (116), Expect(3) = 6e-043
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -2 / +3
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC GV G NL C
Sbjct: 519 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC 659
Score = 42.3 bits (86), Expect(3) = 6e-043
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2 / +3
Query: 783 AAANAFPGFGTTGAPDVQKRELAAFLAQTSHET 685
A+A+A+ GF G+ D KRE+AAF A +HET
Sbjct: 156 ASASAYSGFAQGGSEDDGKREIAAFFAHATHET 254
>gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 3', mRNA sequence
Length = 812
Score = 112 bits (240), Expect(4) = 6e-043
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+ IG L NPD VA D V+F+TA+WFW
Sbjct: 279 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTALWFW 449
Score = 55.1 bits (114), Expect(4) = 6e-043
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2 / +3
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+Y++YC LGV G NL C
Sbjct: 480 GFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC 620
Score = 37.3 bits (75), Expect(4) = 6e-043
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2 / +3
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S GG + + F + ++ C FYT + F++AA+A+ GFG
Sbjct: 9 SGGGNVAGVVTDAFFNSIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 152
Score = 27.2 bits (53), Expect(4) = 6e-043
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 171 KREIAAFFAHITHET 215
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds
Length = 927
Score = 108 bits (230), Expect(5) = 1e-042
Identities = 37/57 (64%), Positives = 49/57 (85%)
Frame = -2 / +1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP++IS++YNYGPAG+ IG LANP+ VA D ++F+TA+W+W
Sbjct: 583 QWPCAAGQKYYGRGPLKISWDYNYGPAGKGIGFNGLANPNKVAQDAVIAFKTALWYW 753
Score = 55.6 bits (115), Expect(5) = 1e-042
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -2 / +1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+YK+YC LGV G NL C
Sbjct: 784 GFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC 924
Score = 36.3 bits (73), Expect(5) = 1e-042
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2 / +1
Query: 915 STPNPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S+ S GG + F + ++ + C FYT + F++AAN++ FG
Sbjct: 157 SSGGSSSGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 318
Score = 28.1 bits (55), Expect(5) = 1e-042
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1 / +1
Query: 1060 VPARAEQCGSQAGGALCPNCLCCSQFGWCG 971
VPA A+ CG QAG C + +CG
Sbjct: 40 VPAAAQNCGCQAGYCCSKFGYCGTTDDYCG 129
Score = 27.6 bits (54), Expect(5) = 1e-042
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 337 KREIAAFFAHVTHET 381
>gb|CL186365.1|CL186365 104_401_10900160_116_32413_030 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900160, DNA
sequence
Length = 695
Score = 113 bits (241), Expect(3) = 2e-042
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = -2 / +2
Query: 891 GGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGA 742
GGVASII ES+FNQMLLHRNDA CPANGFYTYA FIAAAN+FPGFGTTGA
Sbjct: 503 GGVASIISESVFNQMLLHRNDAGCPANGFYTYAAFIAAANSFPGFGTTGA 652
Score = 67.0 bits (140), Expect(3) = 2e-042
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -1 / +2
Query: 1048 AEQCGSQAGGALCPNCLCCSQFGWCGS 968
A+QCG+QA GALCPNC CCS +GWCGS
Sbjct: 365 AQQCGTQAAGALCPNCQCCSMYGWCGS 445
Score = 32.7 bits (65), Expect(3) = 2e-042
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 753 TTGAPDVQKRELAAFLA 703
T PDVQKRELAAFLA
Sbjct: 644 TGAKPDVQKRELAAFLA 694
>gb|BE358815.1|BE358815 DG1_32_F07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 116 bits (247), Expect(3) = 2e-042
Identities = 45/71 (63%), Positives = 50/71 (70%)
Frame = -2 / +3
Query: 807 FYTYAGFIAAANAFPGFGTTGAPDVQKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFK 628
FYTY FI AA+ FPGFGTTG ++RELAAF QTSHETTGGW TAP G +AWGYC
Sbjct: 198 FYTYDAFIEAASKFPGFGTTGDDQTRRRELAAFFGQTSHETTGGWPTAPGGQFAWGYCRV 377
Query: 627 EEQGGASGPDY 595
+EQ P Y
Sbjct: 378 KEQNPTDPPYY 410
Score = 66.1 bits (138), Expect(3) = 2e-042
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -2 / +3
Query: 552 YYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTV 436
YYGRGPIQ+++ YNY AGQA+ ++ NPDLV++DP V
Sbjct: 405 YYGRGPIQLTHEYNYRQAGQALNLNLVGNPDLVSSDPVV 521
Score = 30.9 bits (61), Expect(3) = 2e-042
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 888 GVASIIPESLFNQMLLHRNDAAC 820
GV SII +F ML HR D+ C
Sbjct: 120 GVWSIITRPMFQSMLSHRGDSGC 188
>gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 710
Score = 112 bits (240), Expect(4) = 8e-042
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -2 / +2
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+ IG L NPD VA D V+F+TA+WFW
Sbjct: 218 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTALWFW 388
Score = 55.1 bits (114), Expect(4) = 8e-042
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2 / +2
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+Y++YC LGV G NL C
Sbjct: 419 GFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC 559
Score = 33.6 bits (67), Expect(4) = 8e-042
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 822 CPANGFYTYAGFIAAANAFPGFG 754
C FYT + F++AA+A+ GFG
Sbjct: 23 CEGKNFYTRSAFLSAADAYKGFG 91
Score = 27.2 bits (53), Expect(4) = 8e-042
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 110 KREIAAFFAHITHET 154
>gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_G01_A007 5', mRNA sequence
Length = 662
Score = 112 bits (240), Expect(4) = 1e-041
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -2 / +1
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+ IG L NPD VA D V+F+TA+WFW
Sbjct: 229 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTALWFW 399
Score = 55.1 bits (114), Expect(4) = 1e-041
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2 / +1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC +++ R+G+Y++YC LGV G NL C
Sbjct: 430 GFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC 570
Score = 33.6 bits (67), Expect(4) = 1e-041
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2 / +1
Query: 822 CPANGFYTYAGFIAAANAFPGFG 754
C FYT + F++AA+A+ GFG
Sbjct: 34 CEGKNFYTRSAFLSAADAYKGFG 102
Score = 26.7 bits (52), Expect(4) = 1e-041
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 121 KREVAAFFAHITHET 165
>gb|CF480059.1|CF480059 POL1_63_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_63_B05_A002 5', mRNA sequence
Length = 590
Score = 151 bits (325), Expect(2) = 5e-041
Identities = 57/93 (61%), Positives = 68/93 (73%)
Frame = -2 / +1
Query: 906 NPPSSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQK 727
NP + VA+++ E L+N + LH++DAACPA GFYTYA FI AA FP F TG +K
Sbjct: 199 NPAAPAPVATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRK 378
Query: 726 RELAAFLAQTSHETTGGWATAPDGPYAWGYCFK 628
RE+AA AQ SHETTGGWATAPDG YAWG C+K
Sbjct: 379 REVAALFAQISHETTGGWATAPDGQYAWGLCYK 477
Score = 38.2 bits (77), Expect(2) = 5e-041
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 579 QWPCAAGKKYYGRGPI 532
QWPC GK Y+GRGPI
Sbjct: 524 QWPCYPGKSYHGRGPI 571
>gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404861, DNA
sequence
Length = 627
Score = 122 bits (262), Expect(3) = 6e-041
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = -2 / -1
Query: 585 SAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWM 406
+AQWPCA GKKYYGRGP+QIS+NYNYGPAG+ IG L NPD+VA DP ++F+TA+WFWM
Sbjct: 378 NAQWPCAPGKKYYGRGPLQISWNYNYGPAGREIGFDGLGNPDMVAQDPVIAFKTALWFWM 199
Score = 51.9 bits (107), Expect(3) = 6e-041
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -2 / -1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G I+G LEC +++ R+G+YK+YC GV G++L C
Sbjct: 171 GFGATIRAIDGALECNGNNPAQMNARVGYYKQYCQQFGVDPGNSLTC 31
Score = 37.3 bits (75), Expect(3) = 6e-041
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 783 AAANAFPGFGTTGAPDVQKRELAAFLAQTSHET 685
AA++++P F G KRE+AAF A +HET
Sbjct: 622 AASSSYPAFAHGGTEADGKREIAAFFAHVTHET 524
>gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 618
Score = 112 bits (240), Expect(4) = 8e-040
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -2 / +3
Query: 579 QWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFW 409
QWPCAAG+KYYGRGP+QIS+NYNYGPAG+ IG L NPD VA D V+F+TA+WFW
Sbjct: 300 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTALWFW 470
Score = 44.6 bits (91), Expect(4) = 8e-040
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +3
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGV 199
G+G ING LEC +++ R+G+Y +YC LGV
Sbjct: 501 GFGATIRAINGALECNGKNTAQMNARVGYYXQYCQQLGV 617
Score = 37.3 bits (75), Expect(4) = 8e-040
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2 / +3
Query: 897 SSGGVASIIPESLFNQMLLHRNDAACPANGFYTYAGFIAAANAFPGFG 754
S GG + + F + ++ C FYT + F++AA+A+ GFG
Sbjct: 30 SGGGNVAGVVTDAFFNSIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 173
Score = 27.2 bits (53), Expect(4) = 8e-040
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 729 KRELAAFLAQTSHET 685
KRE+AAF A +HET
Sbjct: 192 KREIAAFFAHITHET 236
>gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f274h04, DNA
sequence
Length = 597
Score = 128 bits (274), Expect(2) = 1e-038
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = -2 / +1
Query: 639 YCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPD 460
+C+ E GAS + QWPCA GKKYYGRGP+QIS+NYNYGPAG+AIG L NPD
Sbjct: 4 FCYINEINGASRNYCDANNRQWPCAPGKKYYGRGPLQISWNYNYGPAGKAIGFDGLGNPD 183
Query: 459 LVATDPTVSFETAVWFWM 406
VA DP +SF+TA+WFWM
Sbjct: 184 KVAQDPVISFKTALWFWM 237
Score = 53.8 bits (111), Expect(2) = 1e-038
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = -2 / +1
Query: 315 GYGVVTNIINGGLECGHGADSRVADRIGFYKRYCDLLGVSYGDNLDC 175
G+G ING LEC V R+G+YK YC GV G+NL C
Sbjct: 265 GFGATIRAINGALECNGKNPGAVNARVGYYKDYCKQFGVDPGNNLTC 405
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 892,888,878
Number of Sequences: 832831
Number of extensions: 11811191
Number of successful extensions: 112770
Number of sequences better than 1.0e-020: 206
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 38225795724
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)