TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3754578.2.1
(725 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI098036.1|BI098036 IP1_31_C06.g1_A002 Immature pannicle... 220 1e-078
gb|CW173783.1|CW173783 104_585_11157034_116_36552_037 Sorgh... 220 5e-078
gb|BG049824.1|BG049824 FM1_66_C11.g1_A003 Floral-Induced Me... 215 1e-076
gb|BF656435.1|BF656435 FM1_45_G12.g2_A003 Floral-Induced Me... 215 1e-076
gb|AF466200.2| Sorghum bicolor putative protein kinase gene... 220 1e-069
gb|AW285397.1|AW285397 LG1_244_H02.g1_A002 Light Grown 1 (L... 184 1e-068
gb|CW044336.1|CW044336 104_280_10508891_114_30268 Sorghum m... 220 8e-060
gb|CW486926.1|CW486926 fsbb001f252h17k0 Sorghum methylation... 220 2e-059
gb|CW152074.1|CW152074 104_553_11144294_148_36330_061 Sorgh... 126 3e-055
gb|CW098046.1|CW098046 104_464_11002794_148_34367_073 Sorgh... 199 5e-050
gb|BG050366.1|BG050366 FM1_53_B07.g1_A003 Floral-Induced Me... 176 3e-046
gb|CW152073.1|CW152073 104_553_11144294_116_36325_061 Sorgh... 83 2e-045
gb|BZ350980.1|BZ350980 ht64b02.g1 WGS-SbicolorF (JM107 adap... 127 2e-028
gb|CF484228.1|CF484228 POL1_4_A06.b1_A002 Pollen Sorghum bi... 127 2e-028
gb|CF488926.1|CF488926 POL1_53_C07.b1_A002 Pollen Sorghum b... 127 2e-028
gb|CW486925.1|CW486925 fsbb001f252h17f0 Sorghum methylation... 126 3e-028
gb|CN127712.1|CN127712 RHOH1_24_D05.g3_A002 Acid- and alkal... 126 5e-028
gb|CF072395.1|CF072395 FE1_2_F08.g1_A002 Iron-deficient see... 84 9e-021
>gb|BI098036.1|BI098036 IP1_31_C06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 676
Score = 220 bits (474), Expect(5) = 1e-078
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = -3 / +2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 101 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 280
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKDCWTLSSLHHTPA F VGWY F + R SV
Sbjct: 281 CNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 415
Score = 188 bits (406), Expect(6) = 4e-073
Identities = 79/97 (81%), Positives = 86/97 (88%)
Frame = +2 / -2
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 384 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 205
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 204 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 94
Score = 175 bits (376), Expect(6) = 1e-066
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = +3 / -3
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 392 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 213
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
CSS N TGR+SSCGNIGQ LL+* S+PI P LHLPS
Sbjct: 212 LCSS*TRNHTGRSSSCGNIGQALLH*ISQPIDPYLHLPS 96
Score = 169 bits (363), Expect(5) = 2e-061
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +1 / -1
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 397 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 218
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG VVV AT+LAE+PAVGILDR+C IE L+P* H YIF
Sbjct: 217 VGCVVVEHATILAEVPAVGILDRLCCIEFLNP*THTYIF 101
Score = 168 bits (362), Expect(6) = 4e-065
Identities = 75/101 (74%), Positives = 79/101 (78%)
Frame = -1 / +3
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG R+S+QQ LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV H
Sbjct: 96 RWKM*VWVYGLRNSMQQSLSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSH 275
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 276 PAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 398
Score = 162 bits (349), Expect(4) = 1e-054
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = -2 / +1
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG E+Q NK+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS I
Sbjct: 97 DGRCKYGSMG*EIQCNKACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAI 276
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 277 LL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 393
Score = 74.4 bits (156), Expect(5) = 1e-078
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / +1
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIR 92
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR
Sbjct: 511 FTRSLLVQLWRWRPCSCN*SNFDVVGQIR 597
Score = 72.1 bits (151), Expect(6) = 4e-065
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +2
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 509 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 598
Score = 71.6 bits (150), Expect(6) = 4e-073
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -3
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 596 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 510
Score = 71.2 bits (149), Expect(6) = 1e-066
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1 / -1
Query: 58 ERRRTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
E+ L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 631 EKNEDVHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 509
Score = 68.0 bits (142), Expect(5) = 2e-061
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -2
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 597 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 511
Score = 59.3 bits (123), Expect(4) = 1e-054
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD* 93
FYTI IGP VALASLFL*LIQF*CSRPD*
Sbjct: 510 FYTIFIGPTVALASLFL*LIQF*CSRPD* 596
Score = 29.0 bits (57), Expect(5) = 1e-078
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +2
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 476 KI*EAPTSWLVF 511
Score = 29.0 bits (57), Expect(6) = 4e-065
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 415 RCCCSSIAGS 444
Score = 29.0 bits (57), Expect(6) = 4e-073
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 44 LLXEKNGDVHLIWNIPSNLAY 106
L+ EKN DVHLIW S L +
Sbjct: 640 LV*EKNEDVHLIWTF*SGLLH 578
Score = 28.6 bits (56), Expect(6) = 4e-073
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 178 KTITNWLGLPKS 213
KT+TNWL LPKS
Sbjct: 512 KTLTNWLELPKS 477
Score = 28.1 bits (55), Expect(6) = 4e-073
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -2
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 444 *ASNGGATTPTL 409
Score = 28.1 bits (55), Expect(5) = 2e-061
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 511 KH*PTGWSFLNL 476
Score = 28.1 bits (55), Expect(6) = 1e-066
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 177 KNNNQLVGAS*IF 215
KN NQLVGAS*IF
Sbjct: 513 KNTNQLVGAS*IF 475
Score = 27.2 bits (53), Expect(4) = 1e-054
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 413 VGVVAPPLLAQ 445
Score = 26.3 bits (51), Expect(6) = 4e-065
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 213 RFRKPQPVGYCF 178
RFRK QPVG CF
Sbjct: 477 RFRKLQPVG*CF 512
Score = 25.4 bits (49), Expect(6) = 1e-066
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 25 GKLCLVITXRKERRR 69
GK CLVIT +E RR
Sbjct: 662 GKFCLVITCIREERR 618
Score = 24.9 bits (48), Expect(6) = 4e-065
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 83 SRSDVRLRSFLIVI 42
SRSDVRLRS LI +
Sbjct: 601 SRSDVRLRSSLIQV 642
Score = 24.9 bits (48), Expect(5) = 1e-078
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 81 QIRCTSPFFSXSN 43
QIRCTS FFS ++
Sbjct: 603 QIRCTSSFFSYTS 641
Score = 24.9 bits (48), Expect(4) = 1e-054
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 221 RPEDLGSPNQLVIVF 177
R +DLGS NQLV VF
Sbjct: 469 R*KDLGSSNQLVSVF 513
Score = 24.9 bits (48), Expect(6) = 1e-066
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 445 LSQQWRSNNTY 413
Score = 24.9 bits (48), Expect(5) = 2e-061
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 37 LVITXRKERRRTSDLE 84
++ R+ERRRTSDL+
Sbjct: 647 VITCIREERRRTSDLD 600
Score = 24.4 bits (47), Expect(5) = 2e-061
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 443 EPAMEEQQHL 414
Score = 24.0 bits (46), Expect(5) = 1e-078
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 443 QYELNEWVC 469
Score = 24.0 bits (46), Expect(6) = 1e-066
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 470 RTPIHLAHI 444
Score = 24.0 bits (46), Expect(6) = 4e-073
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 474 LTHTHSFSSY 445
Score = 22.1 bits (42), Expect(6) = 4e-065
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 444 NMS*MNGCAL 473
>gb|CW173783.1|CW173783 104_585_11157034_116_36552_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157034, DNA
sequence
Length = 642
Score = 220 bits (474), Expect(5) = 5e-078
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = -3 / -3
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 529 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 350
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKDCWTLSSLHHTPA F VGWY F + R SV
Sbjct: 349 CNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 215
Score = 188 bits (406), Expect(6) = 2e-072
Identities = 79/97 (81%), Positives = 86/97 (88%)
Frame = +2 / +3
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 246 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 425
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 426 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 536
Score = 175 bits (376), Expect(6) = 2e-065
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = +3 / +1
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 238 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 417
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
CSS N TGR+SSCGNIGQ LL+* S+PI P LHLPS
Sbjct: 418 LCSS*TRNHTGRSSSCGNIGQALLH*ISQPIDPYLHLPS 534
Score = 169 bits (363), Expect(4) = 3e-059
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +1 / +2
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 233 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 412
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG VVV AT+LAE+PAVGILDR+C IE L+P* H YIF
Sbjct: 413 VGCVVVEHATILAEVPAVGILDRLCCIEFLNP*THTYIF 529
Score = 168 bits (362), Expect(6) = 3e-064
Identities = 75/101 (74%), Positives = 79/101 (78%)
Frame = -1 / -1
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG R+S+QQ LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV H
Sbjct: 534 RWKM*VWVYGLRNSMQQSLSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSH 355
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 354 PAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 232
Score = 162 bits (349), Expect(4) = 1e-054
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = -2 / -2
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG E+Q NK+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS I
Sbjct: 533 DGRCKYGSMG*EIQCNKACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAI 354
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 353 LL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 237
Score = 74.4 bits (156), Expect(5) = 5e-078
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / -2
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIR 92
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR
Sbjct: 119 FTRSLLVQLWRWRPCSCN*SNFDVVGQIR 33
Score = 72.1 bits (151), Expect(6) = 3e-064
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / -3
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 121 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 32
Score = 71.6 bits (150), Expect(6) = 2e-072
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / +1
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 34 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 120
Score = 69.8 bits (146), Expect(6) = 2e-065
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1 / +2
Query: 79 LEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 20 LIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 121
Score = 68.0 bits (142), Expect(4) = 3e-059
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / +3
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 33 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 119
Score = 59.3 bits (123), Expect(4) = 1e-054
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / -1
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD* 93
FYTI IGP VALASLFL*LIQF*CSRPD*
Sbjct: 120 FYTIFIGPTVALASLFL*LIQF*CSRPD* 34
Score = 29.0 bits (57), Expect(5) = 5e-078
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / -3
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 154 KI*EAPTSWLVF 119
Score = 29.0 bits (57), Expect(6) = 3e-064
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 215 RCCCSSIAGS 186
Score = 28.6 bits (56), Expect(6) = 2e-072
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 178 KTITNWLGLPKS 213
KT+TNWL LPKS
Sbjct: 118 KTLTNWLELPKS 153
Score = 28.1 bits (55), Expect(6) = 2e-072
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 186 *ASNGGATTPTL 221
Score = 28.1 bits (55), Expect(4) = 3e-059
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 119 KH*PTGWSFLNL 154
Score = 28.1 bits (55), Expect(6) = 2e-065
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 177 KNNNQLVGAS*IF 215
KN NQLVGAS*IF
Sbjct: 117 KNTNQLVGAS*IF 155
Score = 27.2 bits (53), Expect(4) = 1e-054
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -3
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 217 VGVVAPPLLAQ 185
Score = 26.3 bits (51), Expect(6) = 3e-064
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 213 RFRKPQPVGYCF 178
RFRK QPVG CF
Sbjct: 153 RFRKLQPVG*CF 118
Score = 26.3 bits (51), Expect(6) = 2e-072
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / +2
Query: 56 KNGDVHLIWNIPSNLAY 106
KN DVHLIW S L +
Sbjct: 2 KNEDVHLIWTF*SGLLH 52
Score = 24.9 bits (48), Expect(4) = 1e-054
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 221 RPEDLGSPNQLVIVF 177
R +DLGS NQLV VF
Sbjct: 161 R*KDLGSSNQLVSVF 117
Score = 24.9 bits (48), Expect(6) = 2e-065
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 185 LSQQWRSNNTY 217
Score = 24.4 bits (47), Expect(4) = 3e-059
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 187 EPAMEEQQHL 216
Score = 24.0 bits (46), Expect(5) = 5e-078
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -3
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 187 QYELNEWVC 161
Score = 24.0 bits (46), Expect(6) = 2e-065
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 160 RTPIHLAHI 186
Score = 24.0 bits (46), Expect(6) = 2e-072
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 156 LTHTHSFSSY 185
Score = 22.6 bits (43), Expect(5) = 5e-078
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 81 QIRCTSPFF 55
QIRCTS FF
Sbjct: 27 QIRCTSSFF 1
Score = 22.1 bits (42), Expect(6) = 3e-064
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 186 NMS*MNGCAL 157
Score = 22.1 bits (42), Expect(6) = 2e-065
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 55 KERRRTSDLE 84
+ERRRTSDL+
Sbjct: 1 EERRRTSDLD 30
Score = 21.7 bits (41), Expect(6) = 3e-064
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 83 SRSDVRLRS 57
SRSDVRLRS
Sbjct: 29 SRSDVRLRS 3
>gb|BG049824.1|BG049824 FM1_66_C11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 618
Score = 215 bits (463), Expect(4) = 1e-076
Identities = 83/105 (79%), Positives = 87/105 (82%)
Frame = -3 / +2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 74 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 253
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKD WTLSSLHHTPA F VGWY F + R SV
Sbjct: 254 CNYR*LSEAKDFWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 388
Score = 187 bits (402), Expect(5) = 3e-071
Identities = 78/97 (80%), Positives = 86/97 (88%)
Frame = +2 / -1
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQ+S ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 357 QKGEYQPTKLNMAGV**REDKVQKSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 178
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 177 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 67
Score = 170 bits (366), Expect(5) = 3e-063
Identities = 75/99 (75%), Positives = 80/99 (80%)
Frame = +3 / -2
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT S NP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 365 DRIKKENTSQPN*TWLGYDEERTKSRNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 186
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
SS N TGR+SSCGNIGQ LL+*TS+PI P LHLPS
Sbjct: 185 LYSS*TRNHTGRSSSCGNIGQALLH*TSQPIDPYLHLPS 69
Score = 168 bits (361), Expect(4) = 2e-059
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = +1 / -3
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ P IL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 370 PVIGSKRRIPANQTKHGWGMMKRGQSPEILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 191
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG +VV AT+LAE+PAVGILDR+C IELL+P* H YIF
Sbjct: 190 VGCIVVEHATILAEVPAVGILDRLCCIELLNP*THTYIF 74
Score = 166 bits (356), Expect(5) = 9e-063
Identities = 74/101 (73%), Positives = 78/101 (77%)
Frame = -1 / +3
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG RSS+QQ LSNIPTAG+SAS VA TT +PTISH GRCCACGIS SVV H
Sbjct: 69 RWKM*VWVYGLRSSMQQSLSNIPTAGTSASMVACSTTIQPTISHLGRCCACGIS*SVVSH 248
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RI+G CPLFIIPQP L LAGI FD I G
Sbjct: 249 PAVTTDS*AKRRISGLCPLFIIPQPCLVWLAGILLFDPITG 371
Score = 158 bits (340), Expect(4) = 1e-054
Identities = 73/99 (73%), Positives = 81/99 (81%)
Frame = -2 / +1
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG EVQ NK+CPIFPQLE+LPV L +LL+ PLSVT ADAVLVG*V PWS I
Sbjct: 70 DGRCKYGSMG*EVQCNKACPIFPQLELLPVWLRVQLLYSPLSVT*ADAVLVG*VDPWSAI 249
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S G LD VLSSSYPS V* GWLVFSF +S
Sbjct: 250 LL*LQIAKRSEGFLDFVLSSSYPSHV*FGWLVFSFLIRS 366
Score = 78.5 bits (165), Expect(4) = 1e-076
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -2 / +2
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIRGNIPDQMYVSVL 56
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR + D ++V +L
Sbjct: 491 FTRSLLVQLWRWRPCSCN*SNFDVVGQIRMSRSDVVFVLLL 613
Score = 72.1 bits (151), Expect(5) = 9e-063
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +3
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 489 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 578
Score = 71.6 bits (150), Expect(5) = 3e-071
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -1
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 576 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 490
Score = 70.3 bits (147), Expect(5) = 3e-063
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1 / -2
Query: 67 RTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
R L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 602 RRLHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 489
Score = 68.0 bits (142), Expect(4) = 2e-059
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -3
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 577 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 491
Score = 61.6 bits (128), Expect(4) = 1e-054
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -1 / +1
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD*REYSRSDVR 66
FYTI IGP VALASLFL*LIQF*CSRPD* R +R
Sbjct: 490 FYTIFIGPTVALASLFL*LIQF*CSRPD*NVQIRCSLR 603
Score = 32.2 bits (64), Expect(5) = 3e-071
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 179 KQ*PTGWGFLNLQA 220
K *PTGW FLNLQA
Sbjct: 491 KH*PTGWSFLNLQA 450
Score = 30.9 bits (61), Expect(4) = 1e-076
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +3
Query: 217 LKI*EAPTSWLLF 179
LKI*EAPTSWL+F
Sbjct: 453 LKI*EAPTSWLVF 491
Score = 30.9 bits (61), Expect(5) = 3e-063
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 178 KTITNWLGLPKSSGLV 225
KT+TNWL LPKSS +
Sbjct: 492 KTLTNWLELPKSSSFL 445
Score = 29.5 bits (58), Expect(4) = 2e-059
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -3
Query: 177 KNNNQLVGAS*IFRPS 224
KN NQLVGAS*IF+ S
Sbjct: 493 KNTNQLVGAS*IFKLS 446
Score = 29.0 bits (57), Expect(5) = 9e-063
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 388 RCCCSSIAGS 417
Score = 28.6 bits (56), Expect(5) = 9e-063
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3 / +1
Query: 219 A*RFRKPQPVGYCF 178
A*RFRK QPVG CF
Sbjct: 451 A*RFRKLQPVG*CF 492
Score = 28.1 bits (55), Expect(5) = 3e-071
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 417 *ASNGGATTPTL 382
Score = 27.2 bits (53), Expect(4) = 1e-054
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 386 VGVVAPPLLAQ 418
Score = 26.3 bits (51), Expect(4) = 1e-054
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 215 EDLGSPNQLVIVF 177
EDLGS NQLV VF
Sbjct: 455 EDLGSSNQLVSVF 493
Score = 26.3 bits (51), Expect(5) = 3e-071
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 351 SLNLLPHTHAFSSY 392
S + LPH H+FSSY
Sbjct: 459 SSSFLPHIHSFSSY 418
Score = 24.9 bits (48), Expect(5) = 3e-063
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 418 LSQQWRSNNTY 386
Score = 24.4 bits (47), Expect(4) = 2e-059
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 416 EPAMEEQQHL 387
Score = 23.5 bits (45), Expect(4) = 1e-076
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 393 NMS*MHGCAV 364
NMS*M+GCAV
Sbjct: 417 NMS*MNGCAV 446
Score = 23.5 bits (45), Expect(5) = 3e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 364 YRTPMHLAHI 393
YRT +HLAHI
Sbjct: 446 YRTSIHLAHI 417
Score = 22.6 bits (43), Expect(5) = 9e-063
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 394 KYELNAWVC 368
+YELN W+C
Sbjct: 416 QYELNEWMC 442
>gb|BF656435.1|BF656435 FM1_45_G12.g2_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 633
Score = 215 bits (463), Expect(4) = 1e-076
Identities = 83/105 (79%), Positives = 87/105 (82%)
Frame = -3 / +1
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 88 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 267
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKD WTLSSLHHTPA F VGWY F + R SV
Sbjct: 268 CNYR*LSEAKDFWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 402
Score = 187 bits (402), Expect(5) = 2e-070
Identities = 78/97 (80%), Positives = 86/97 (88%)
Frame = +2 / -2
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQ+S ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 371 QKGEYQPTKLNMAGV**REDKVQKSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 192
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 191 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 81
Score = 170 bits (366), Expect(5) = 4e-063
Identities = 75/99 (75%), Positives = 80/99 (80%)
Frame = +3 / -3
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT S NP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 379 DRIKKENTSQPN*TWLGYDEERTKSRNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 200
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
SS N TGR+SSCGNIGQ LL+*TS+PI P LHLPS
Sbjct: 199 LYSS*TRNHTGRSSSCGNIGQALLH*TSQPIDPYLHLPS 83
Score = 168 bits (361), Expect(4) = 9e-059
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = +1 / -1
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ P IL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 384 PVIGSKRRIPANQTKHGWGMMKRGQSPEILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 205
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG +VV AT+LAE+PAVGILDR+C IELL+P* H YIF
Sbjct: 204 VGCIVVEHATILAEVPAVGILDRLCCIELLNP*THTYIF 88
Score = 166 bits (356), Expect(5) = 2e-062
Identities = 74/101 (73%), Positives = 78/101 (77%)
Frame = -1 / +2
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG RSS+QQ LSNIPTAG+SAS VA TT +PTISH GRCCACGIS SVV H
Sbjct: 83 RWKM*VWVYGLRSSMQQSLSNIPTAGTSASMVACSTTIQPTISHLGRCCACGIS*SVVSH 262
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RI+G CPLFIIPQP L LAGI FD I G
Sbjct: 263 PAVTTDS*AKRRISGLCPLFIIPQPCLVWLAGILLFDPITG 385
Score = 158 bits (340), Expect(4) = 9e-054
Identities = 73/99 (73%), Positives = 81/99 (81%)
Frame = -2 / +3
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG EVQ NK+CPIFPQLE+LPV L +LL+ PLSVT ADAVLVG*V PWS I
Sbjct: 84 DGRCKYGSMG*EVQCNKACPIFPQLELLPVWLRVQLLYSPLSVT*ADAVLVG*VDPWSAI 263
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S G LD VLSSSYPS V* GWLVFSF +S
Sbjct: 264 LL*LQIAKRSEGFLDFVLSSSYPSHV*FGWLVFSFLIRS 380
Score = 78.5 bits (165), Expect(4) = 1e-076
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIRGNIPDQMYVSVL 56
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR + D ++V +L
Sbjct: 505 FTRSLLVQLWRWRPCSCN*SNFDVVGQIRMSRSDVVFVLLL 627
Score = 72.1 bits (151), Expect(5) = 2e-062
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +2
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 503 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 592
Score = 71.6 bits (150), Expect(5) = 2e-070
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -2
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 590 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 504
Score = 70.3 bits (147), Expect(5) = 4e-063
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1 / -3
Query: 67 RTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
R L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 616 RRLHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 503
Score = 68.0 bits (142), Expect(4) = 9e-059
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -1
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 591 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 505
Score = 61.6 bits (128), Expect(4) = 9e-054
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -1 / +3
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD*REYSRSDVR 66
FYTI IGP VALASLFL*LIQF*CSRPD* R +R
Sbjct: 504 FYTIFIGPTVALASLFL*LIQF*CSRPD*NVQIRCSLR 617
Score = 32.2 bits (64), Expect(5) = 2e-070
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 179 KQ*PTGWGFLNLQA 220
K *PTGW FLNLQA
Sbjct: 505 KH*PTGWSFLNLQA 464
Score = 30.9 bits (61), Expect(4) = 1e-076
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +2
Query: 217 LKI*EAPTSWLLF 179
LKI*EAPTSWL+F
Sbjct: 467 LKI*EAPTSWLVF 505
Score = 30.9 bits (61), Expect(5) = 4e-063
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 178 KTITNWLGLPKSSGLV 225
KT+TNWL LPKSS +
Sbjct: 506 KTLTNWLELPKSSSFL 459
Score = 29.5 bits (58), Expect(4) = 9e-059
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -1
Query: 177 KNNNQLVGAS*IFRPS 224
KN NQLVGAS*IF+ S
Sbjct: 507 KNTNQLVGAS*IFKLS 460
Score = 28.6 bits (56), Expect(5) = 2e-062
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3 / +3
Query: 219 A*RFRKPQPVGYCF 178
A*RFRK QPVG CF
Sbjct: 465 A*RFRKLQPVG*CF 506
Score = 28.1 bits (55), Expect(5) = 2e-062
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 402 RCCCSSMAGS 431
Score = 26.3 bits (51), Expect(4) = 9e-054
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 215 EDLGSPNQLVIVF 177
EDLGS NQLV VF
Sbjct: 469 EDLGSSNQLVSVF 507
Score = 26.3 bits (51), Expect(5) = 2e-070
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 351 SLNLLPHTHAFSSY 392
S + LPH H+FSSY
Sbjct: 473 SSSFLPHIHSFSSY 432
Score = 25.8 bits (50), Expect(5) = 2e-070
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1 / -2
Query: 394 *ASNGGATTPTI 429
*AS+GGATTPT+
Sbjct: 431 *ASHGGATTPTL 396
Score = 24.4 bits (47), Expect(4) = 9e-054
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 425 VGVVAPPLLAQ 393
VGVVAPP LAQ
Sbjct: 400 VGVVAPPWLAQ 432
Score = 24.4 bits (47), Expect(5) = 4e-063
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 430 EPAMEEQQHL 401
Score = 23.5 bits (45), Expect(4) = 1e-076
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +2
Query: 393 NMS*MHGCAV 364
NMS*M+GCAV
Sbjct: 431 NMS*MNGCAV 460
Score = 23.5 bits (45), Expect(5) = 4e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 364 YRTPMHLAHI 393
YRT +HLAHI
Sbjct: 460 YRTSIHLAHI 431
Score = 22.6 bits (43), Expect(5) = 2e-062
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 394 KYELNAWVC 368
+YELN W+C
Sbjct: 430 QYELNEWMC 456
Score = 22.1 bits (42), Expect(4) = 9e-059
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 393 LSQQRRSNNTY 425
LSQ RSNNTY
Sbjct: 432 LSQPWRSNNTY 400
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2,
fertilization-independent endosperm proteins, hypothetical
protein, putative non-LTR retroelement reverse
transcriptase, OCL5 protein, tryptophan synthase
beta-subunit, hypothetical proteins, putative AP
endonuclease, putative RNA polymerase II complex component
SRB7, putative beta-1,3-glucanase, hypothetical protein,
TNP2-like protein, hypothetical protein, putative
phosphate/phosphoenolpyruvate translocator, putative
protein, hypothetical proteins, putative
galactosyltransferase family, hypothetical protein,
putative cytochrome P450 family, putative lipid transfer
protein, putative photoreceptor-interacting protein, and
hypothetical protein genes, complete cds; and hypothetical
protein gene, partial cds
Length = 202197
Score = 220 bits (474), Expect(3) = 1e-069
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = -3 / +2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 171137 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 171316
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKDCWTLSSLHHTPA F VGWY F + R SV
Sbjct: 171317 CNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 171451
Score = 188 bits (406), Expect(6) = 5e-063
Identities = 79/97 (81%), Positives = 86/97 (88%)
Frame = +2 / -1
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 171420 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 171241
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 171240 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 171130
Score = 175 bits (376), Expect(3) = 4e-055
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = +3 / -2
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 171428 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 171249
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
CSS N TGR+SSCGNIGQ LL+* S+PI P LHLPS
Sbjct: 171248 LCSS*TRNHTGRSSSCGNIGQALLH*ISQPIDPYLHLPS 171132
Score = 169 bits (363), Expect(3) = 2e-052
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +1 / -3
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 171433 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 171254
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG VVV AT+LAE+PAVGILDR+C IE L+P* H YIF
Sbjct: 171253 VGCVVVEHATILAEVPAVGILDRLCCIEFLNP*THTYIF 171137
Score = 168 bits (362), Expect(3) = 9e-054
Identities = 75/101 (74%), Positives = 79/101 (78%)
Frame = -1 / +3
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG R+S+QQ LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV H
Sbjct: 171132 RWKM*VWVYGLRNSMQQSLSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSH 171311
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 171312 PAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 171434
Score = 162 bits (349), Expect(3) = 1e-047
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = -2 / +1
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG E+Q NK+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS I
Sbjct: 171133 DGRCKYGSMG*EIQCNKACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAI 171312
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 171313 LL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 171429
Score = 74.4 bits (156), Expect(3) = 1e-069
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / +1
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIR 92
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR
Sbjct: 171547 FTRSLLVQLWRWRPCSCN*SNFDVVGQIR 171633
Score = 72.1 bits (151), Expect(3) = 9e-054
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +2
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 171545 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 171634
Score = 71.6 bits (150), Expect(6) = 5e-063
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -2
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 171632 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 171546
Score = 71.2 bits (149), Expect(3) = 4e-055
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1 / -3
Query: 58 ERRRTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
E+ L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 171667 EKNEDVHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 171545
Score = 68.0 bits (142), Expect(3) = 2e-052
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -1
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 171633 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 171547
Score = 59.3 bits (123), Expect(3) = 1e-047
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD* 93
FYTI IGP VALASLFL*LIQF*CSRPD*
Sbjct: 171546 FYTIFIGPTVALASLFL*LIQF*CSRPD* 171632
Score = 31.3 bits (62), Expect(6) = 5e-063
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / -2
Query: 7 GSCKDQGKLCLVITXRKERRR 69
G CK+Q CLVIT +E RR
Sbjct: 171716 GDCKEQETFCLVITCIREERR 171654
Score = 29.0 bits (57), Expect(3) = 1e-069
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +2
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 171512 KI*EAPTSWLVF 171547
Score = 29.0 bits (57), Expect(3) = 9e-054
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 171451 RCCCSSIAGS 171480
Score = 29.0 bits (57), Expect(6) = 5e-063
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -3
Query: 44 LLXEKNGDVHLIWNIPSNLAY 106
L+ EKN DVHLIW S L +
Sbjct: 171676 LV*EKNEDVHLIWTF*SGLLH 171614
Score = 28.6 bits (56), Expect(6) = 5e-063
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -2
Query: 178 KTITNWLGLPKS 213
KT+TNWL LPKS
Sbjct: 171548 KTLTNWLELPKS 171513
Score = 28.1 bits (55), Expect(6) = 5e-063
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 171480 *ASNGGATTPTL 171445
Score = 28.1 bits (55), Expect(3) = 4e-055
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 177 KNNNQLVGAS*IF 215
KN NQLVGAS*IF
Sbjct: 171549 KNTNQLVGAS*IF 171511
Score = 28.1 bits (55), Expect(3) = 2e-052
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 171547 KH*PTGWSFLNL 171512
Score = 27.2 bits (53), Expect(3) = 1e-047
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 171449 VGVVAPPLLAQ 171481
>gb|AW285397.1|AW285397 LG1_244_H02.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 184 bits (397), Expect(5) = 1e-068
Identities = 70/89 (78%), Positives = 73/89 (82%)
Frame = -3 / +3
Query: 669 PVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASCCNYR*QSEAKDCWTLS 490
PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SCCNYR* SEAKDCWTLS
Sbjct: 3 PVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSCCNYR*LSEAKDCWTLS 182
Query: 489 SLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
SLHHTPA F VGWY F + R SV
Sbjct: 183 SLHHTPAMFSLVGWYSPF*SDHRIDIDSV 269
Score = 154 bits (331), Expect(6) = 1e-063
Identities = 65/79 (82%), Positives = 69/79 (87%)
Frame = +2 / -3
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 238 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 59
Query: 614 *FSRQPYWQNFQLWEYWTG 670
* + QPYWQ FQLWEYWTG
Sbjct: 58 *LNTQPYWQKFQLWEYWTG 2
Score = 150 bits (322), Expect(6) = 4e-059
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = +3 / -1
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 246 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 67
Query: 606 PCSSSPGNRTGRTSSCGNIGQ 668
CSS N TGR+SSCGNIGQ
Sbjct: 66 LCSS*TRNHTGRSSSCGNIGQ 4
Score = 144 bits (309), Expect(5) = 1e-054
Identities = 65/83 (78%), Positives = 70/83 (84%)
Frame = +1 / -2
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 251 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 72
Query: 601 VGRVVVLQATVLAELPAVGILDR 669
VG VVV AT+LAE+PAVGILDR
Sbjct: 71 VGCVVVEHATILAEVPAVGILDR 3
Score = 143 bits (307), Expect(6) = 2e-058
Identities = 64/83 (77%), Positives = 66/83 (79%)
Frame = -1 / +1
Query: 668 LSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRHPAVTTDSRVKLRIAGRCP 489
LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV HPAVTTDS K RIAG CP
Sbjct: 4 LSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSHPAVTTDS*AKRRIAGLCP 183
Query: 488 LFIIPQPGLGRLAGIFFFDTIVG 420
LFIIPQP L LAGI FD I G
Sbjct: 184 LFIIPQPCLVWLAGILLFDPITG 252
Score = 133 bits (286), Expect(4) = 2e-046
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = -2 / +2
Query: 670 SCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGILL*LQIAE*S*GLLDAV 491
+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS ILL*LQIA+ S GLLD V
Sbjct: 2 ACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAILL*LQIAKRSEGLLDFV 181
Query: 490 LSSSYPSQV*VGWLVFSFSTQS 425
LSSSYPS V* GWLVFSF +S
Sbjct: 182 LSSSYPSHV*FGWLVFSFLIRS 247
Score = 74.4 bits (156), Expect(5) = 1e-068
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / +2
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIR 92
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR
Sbjct: 365 FTRSLLVQLWRWRPCSCN*SNFDVVGQIR 451
Score = 72.1 bits (151), Expect(6) = 2e-058
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +3
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 363 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 452
Score = 71.6 bits (150), Expect(6) = 1e-063
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -1
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 450 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 364
Score = 71.2 bits (149), Expect(6) = 4e-059
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1 / -2
Query: 58 ERRRTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
E+ L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 485 EKNEDVHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 363
Score = 68.0 bits (142), Expect(5) = 1e-054
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -3
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 451 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 365
Score = 59.3 bits (123), Expect(4) = 2e-046
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / +1
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD* 93
FYTI IGP VALASLFL*LIQF*CSRPD*
Sbjct: 364 FYTIFIGPTVALASLFL*LIQF*CSRPD* 450
Score = 29.0 bits (57), Expect(5) = 1e-068
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 330 KI*EAPTSWLVF 365
Score = 29.0 bits (57), Expect(6) = 2e-058
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +2
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 269 RCCCSSIAGS 298
Score = 29.0 bits (57), Expect(6) = 1e-063
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -2
Query: 44 LLXEKNGDVHLIWNIPSNLAY 106
L+ EKN DVHLIW S L +
Sbjct: 494 LV*EKNEDVHLIWTF*SGLLH 432
Score = 28.6 bits (56), Expect(6) = 1e-063
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 178 KTITNWLGLPKS 213
KT+TNWL LPKS
Sbjct: 366 KTLTNWLELPKS 331
Score = 28.1 bits (55), Expect(6) = 1e-063
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -3
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 298 *ASNGGATTPTL 263
Score = 28.1 bits (55), Expect(5) = 1e-054
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 365 KH*PTGWSFLNL 330
Score = 28.1 bits (55), Expect(6) = 4e-059
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 177 KNNNQLVGAS*IF 215
KN NQLVGAS*IF
Sbjct: 367 KNTNQLVGAS*IF 329
Score = 27.2 bits (53), Expect(4) = 2e-046
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +3
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 267 VGVVAPPLLAQ 299
Score = 26.3 bits (51), Expect(6) = 2e-058
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 213 RFRKPQPVGYCF 178
RFRK QPVG CF
Sbjct: 331 RFRKLQPVG*CF 366
Score = 24.9 bits (48), Expect(5) = 1e-068
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / +1
Query: 81 QIRCTSPFFSXSN 43
QIRCTS FFS ++
Sbjct: 457 QIRCTSSFFSYTS 495
Score = 24.9 bits (48), Expect(6) = 2e-058
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 83 SRSDVRLRSFLIVI 42
SRSDVRLRS LI +
Sbjct: 455 SRSDVRLRSSLIQV 496
Score = 24.9 bits (48), Expect(4) = 2e-046
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 221 RPEDLGSPNQLVIVF 177
R +DLGS NQLV VF
Sbjct: 323 R*KDLGSSNQLVSVF 367
Score = 24.9 bits (48), Expect(6) = 4e-059
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 299 LSQQWRSNNTY 267
Score = 24.9 bits (48), Expect(5) = 1e-054
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 37 LVITXRKERRRTSDLE 84
++ R+ERRRTSDL+
Sbjct: 501 VITCIREERRRTSDLD 454
Score = 24.4 bits (47), Expect(5) = 1e-054
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 297 EPAMEEQQHL 268
Score = 24.0 bits (46), Expect(5) = 1e-068
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 297 QYELNEWVC 323
Score = 24.0 bits (46), Expect(6) = 4e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 324 RTPIHLAHI 298
Score = 24.0 bits (46), Expect(6) = 1e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -3
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 328 LTHTHSFSSY 299
Score = 22.1 bits (42), Expect(6) = 2e-058
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 298 NMS*MNGCAL 327
Score = 22.1 bits (42), Expect(6) = 4e-059
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 19 DQGKLCLVITXRKERRR 69
+Q CLVIT +E RR
Sbjct: 522 EQETFCLVITCIREERR 472
>gb|CW044336.1|CW044336 104_280_10508891_114_30268 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10508891, DNA
sequence
Length = 554
Score = 220 bits (474), Expect(3) = 8e-060
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = -3 / -3
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 411 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 232
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKDCWTLSSLHHTPA F VGWY F + R SV
Sbjct: 231 CNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 97
Score = 188 bits (406), Expect(4) = 2e-053
Identities = 79/97 (81%), Positives = 86/97 (88%)
Frame = +2 / +2
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 128 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 307
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 308 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 418
Score = 175 bits (376), Expect(4) = 7e-048
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = +3 / +3
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 120 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 299
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
CSS N TGR+SSCGNIGQ LL+* S+PI P LHLPS
Sbjct: 300 LCSS*TRNHTGRSSSCGNIGQALLH*ISQPIDPYLHLPS 416
Score = 169 bits (363), Expect(3) = 6e-044
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +1 / +1
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 115 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 294
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG VVV AT+LAE+PAVGILDR+C IE L+P* H YIF
Sbjct: 295 VGCVVVEHATILAEVPAVGILDRLCCIEFLNP*THTYIF 411
Score = 168 bits (362), Expect(4) = 7e-046
Identities = 75/101 (74%), Positives = 79/101 (78%)
Frame = -1 / -1
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG R+S+QQ LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV H
Sbjct: 416 RWKM*VWVYGLRNSMQQSLSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSH 237
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 236 PAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 114
Score = 162 bits (349), Expect(3) = 9e-042
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = -2 / -2
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG E+Q NK+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS I
Sbjct: 415 DGRCKYGSMG*EIQCNKACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAI 236
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 235 LL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 119
Score = 29.0 bits (57), Expect(3) = 8e-060
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / -3
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 36 KI*EAPTSWLVF 1
Score = 29.0 bits (57), Expect(4) = 7e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 97 RCCCSSIAGS 68
Score = 28.1 bits (55), Expect(4) = 2e-053
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +2
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 68 *ASNGGATTPTL 103
Score = 28.1 bits (55), Expect(4) = 2e-053
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 1 KH*PTGWSFLNL 36
Score = 27.2 bits (53), Expect(3) = 9e-042
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -3
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 99 VGVVAPPLLAQ 67
Score = 26.3 bits (51), Expect(4) = 7e-048
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 181 TITNWLGLPKS 213
T+TNWL LPKS
Sbjct: 3 TLTNWLELPKS 35
Score = 25.8 bits (50), Expect(3) = 6e-044
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 180 NNNQLVGAS*IF 215
N NQLVGAS*IF
Sbjct: 2 NTNQLVGAS*IF 37
Score = 24.9 bits (48), Expect(4) = 7e-048
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 67 LSQQWRSNNTY 99
Score = 24.4 bits (47), Expect(3) = 6e-044
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 69 EPAMEEQQHL 98
Score = 24.0 bits (46), Expect(3) = 8e-060
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -3
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 69 QYELNEWVC 43
Score = 24.0 bits (46), Expect(4) = 7e-048
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 42 RTPIHLAHI 68
Score = 24.0 bits (46), Expect(4) = 2e-053
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 38 LTHTHSFSSY 67
Score = 23.5 bits (45), Expect(4) = 7e-046
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 213 RFRKPQPVGYC 181
RFRK QPVG C
Sbjct: 35 RFRKLQPVG*C 3
Score = 22.1 bits (42), Expect(3) = 9e-042
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 221 RPEDLGSPNQLVIV 180
R +DLGS NQLV V
Sbjct: 43 R*KDLGSSNQLVSV 2
Score = 22.1 bits (42), Expect(4) = 7e-046
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 68 NMS*MNGCAL 39
>gb|CW486926.1|CW486926 fsbb001f252h17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252h17, DNA
sequence
Length = 660
Score = 220 bits (474), Expect(3) = 2e-059
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = -3 / -1
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 414 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 235
Query: 537 CNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
CNYR* SEAKDCWTLSSLHHTPA F VGWY F + R SV
Sbjct: 234 CNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 100
Score = 188 bits (406), Expect(4) = 5e-053
Identities = 79/97 (81%), Positives = 86/97 (88%)
Frame = +2 / +2
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 131 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 310
Query: 614 *FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
* + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 311 *LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 421
Score = 175 bits (376), Expect(4) = 1e-047
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = +3 / +3
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 123 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 302
Query: 606 PCSSSPGNRTGRTSSCGNIGQDLLN*TSRPIGPCLHLPS 722
CSS N TGR+SSCGNIGQ LL+* S+PI P LHLPS
Sbjct: 303 LCSS*TRNHTGRSSSCGNIGQALLH*ISQPIDPYLHLPS 419
Score = 169 bits (363), Expect(3) = 6e-043
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +1 / +1
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 118 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 297
Query: 601 VGRVVVLQATVLAELPAVGILDRIC*IELLDP*AHAYIF 717
VG VVV AT+LAE+PAVGILDR+C IE L+P* H YIF
Sbjct: 298 VGCVVVEHATILAEVPAVGILDRLCCIEFLNP*THTYIF 414
Score = 168 bits (362), Expect(4) = 4e-045
Identities = 75/101 (74%), Positives = 79/101 (78%)
Frame = -1 / -2
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG R+S+QQ LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV H
Sbjct: 419 RWKM*VWVYGLRNSMQQSLSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSH 240
Query: 542 PAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
PAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 239 PAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 117
Score = 162 bits (349), Expect(2) = 3e-041
Identities = 74/99 (74%), Positives = 82/99 (82%)
Frame = -2 / -3
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG E+Q NK+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS I
Sbjct: 418 DGRCKYGSMG*EIQCNKACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAI 239
Query: 541 LL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 238 LL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 122
Score = 29.0 bits (57), Expect(4) = 4e-045
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 100 RCCCSSIAGS 71
Score = 28.1 bits (55), Expect(3) = 2e-059
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 214 KI*EAPTSWLLFF 176
KI*EAPTSWL F+
Sbjct: 39 KI*EAPTSWLGFY 1
Score = 28.1 bits (55), Expect(4) = 5e-053
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +2
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 71 *ASNGGATTPTL 106
Score = 27.6 bits (54), Expect(4) = 5e-053
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 4 KT*PTGWSFLNL 39
Score = 27.2 bits (53), Expect(2) = 3e-041
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 102 VGVVAPPLLAQ 70
Score = 26.3 bits (51), Expect(4) = 1e-047
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +3
Query: 178 KTITNWLGLPKS 213
K +TNWL LPKS
Sbjct: 3 KNLTNWLELPKS 38
Score = 24.9 bits (48), Expect(4) = 1e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 70 LSQQWRSNNTY 102
Score = 24.4 bits (47), Expect(3) = 6e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 72 EPAMEEQQHL 101
Score = 24.0 bits (46), Expect(3) = 2e-059
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 72 QYELNEWVC 46
Score = 24.0 bits (46), Expect(4) = 1e-047
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 45 RTPIHLAHI 71
Score = 24.0 bits (46), Expect(4) = 5e-053
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 41 LTHTHSFSSY 70
Score = 23.1 bits (44), Expect(3) = 6e-043
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 186 NQLVGAS*IF 215
NQLVGAS*IF
Sbjct: 11 NQLVGAS*IF 40
Score = 22.1 bits (42), Expect(4) = 4e-045
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 71 NMS*MNGCAL 42
Score = 21.7 bits (41), Expect(4) = 4e-045
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -2
Query: 213 RFRKPQPVGYCF 178
RFRK QPVG F
Sbjct: 38 RFRKLQPVG*VF 3
>gb|CW152074.1|CW152074 104_553_11144294_148_36330_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144294, DNA
sequence
Length = 664
Score = 126 bits (270), Expect(6) = 5e-053
Identities = 50/66 (75%), Positives = 52/66 (78%)
Frame = -3 / +2
Query: 600 YQSPRQMLCLWDKLVRGQASCCNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRR 421
YQSPRQMLCLWDKL+RGQ SCCNYR* SEAKDCWTLSSLHHTPA F VGWY F + R
Sbjct: 2 YQSPRQMLCLWDKLIRGQPSCCNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHR 181
Query: 420 CCCSSV 403
SV
Sbjct: 182 IDIDSV 199
Score = 111 bits (238), Expect(7) = 3e-055
Identities = 47/58 (81%), Positives = 49/58 (84%)
Frame = +3 / -3
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTD 599
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTD
Sbjct: 176 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTD 3
Score = 106 bits (227), Expect(7) = 9e-049
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = +1 / -1
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 181 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 2
Score = 104 bits (222), Expect(6) = 2e-046
Identities = 46/60 (76%), Positives = 46/60 (76%)
Frame = -1 / +3
Query: 599 ISHPGRCCACGISWSVVRHPAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
ISH GRCCACGIS SVV HPAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 3 ISHLGRCCACGIS*SVVSHPAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 182
Score = 101 bits (215), Expect(4) = 3e-040
Identities = 46/56 (82%), Positives = 49/56 (87%)
Frame = +2 / -2
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD** 601
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**
Sbjct: 168 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD** 1
Score = 95.0 bits (201), Expect(4) = 1e-034
Identities = 47/59 (79%), Positives = 49/59 (83%)
Frame = -2 / +1
Query: 601 LSVTQADAVLVG*VGPWSGILL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
LSVT ADAVLVG*V PWS ILL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 1 LSVT*ADAVLVG*VDPWSAILL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 177
Score = 74.4 bits (156), Expect(6) = 5e-053
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / +1
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIR 92
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR
Sbjct: 295 FTRSLLVQLWRWRPCSCN*SNFDVVGQIR 381
Score = 72.1 bits (151), Expect(6) = 2e-046
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +2
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 293 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 382
Score = 71.6 bits (150), Expect(7) = 3e-055
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -3
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 380 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 294
Score = 71.2 bits (149), Expect(4) = 3e-040
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1 / -1
Query: 58 ERRRTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
E+ L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 415 EKNEDVHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 293
Score = 68.0 bits (142), Expect(7) = 9e-049
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -2
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 381 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 295
Score = 59.3 bits (123), Expect(4) = 1e-034
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD* 93
FYTI IGP VALASLFL*LIQF*CSRPD*
Sbjct: 294 FYTIFIGPTVALASLFL*LIQF*CSRPD* 380
Score = 31.3 bits (62), Expect(7) = 3e-055
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 7 GSCKDQGKLCLVITXRKERRR 69
G CK+Q CLVIT +E RR
Sbjct: 464 GDCKEQETFCLVITCIREERR 402
Score = 29.0 bits (57), Expect(6) = 5e-053
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +2
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 260 KI*EAPTSWLVF 295
Score = 29.0 bits (57), Expect(7) = 3e-055
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 44 LLXEKNGDVHLIWNIPSNLAY 106
L+ EKN DVHLIW S L +
Sbjct: 424 LV*EKNEDVHLIWTF*SGLLH 362
Score = 29.0 bits (57), Expect(6) = 2e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 199 RCCCSSIAGS 228
Score = 28.6 bits (56), Expect(7) = 3e-055
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 178 KTITNWLGLPKS 213
KT+TNWL LPKS
Sbjct: 296 KTLTNWLELPKS 261
Score = 28.1 bits (55), Expect(7) = 3e-055
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -2
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 228 *ASNGGATTPTL 193
Score = 28.1 bits (55), Expect(4) = 3e-040
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 295 KH*PTGWSFLNL 260
Score = 28.1 bits (55), Expect(7) = 9e-049
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 177 KNNNQLVGAS*IF 215
KN NQLVGAS*IF
Sbjct: 297 KNTNQLVGAS*IF 259
Score = 27.2 bits (53), Expect(4) = 1e-034
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 197 VGVVAPPLLAQ 229
Score = 26.3 bits (51), Expect(6) = 2e-046
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 213 RFRKPQPVGYCF 178
RFRK QPVG CF
Sbjct: 261 RFRKLQPVG*CF 296
Score = 25.4 bits (49), Expect(7) = 9e-049
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 6 RILQRSGQIVSSYYYXKR 59
R LQR+G I+SSY KR
Sbjct: 465 RRLQRAGNILSSYNLYKR 412
Score = 24.9 bits (48), Expect(7) = 9e-049
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 229 LSQQWRSNNTY 197
Score = 24.9 bits (48), Expect(6) = 2e-046
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 83 SRSDVRLRSFLIVI 42
SRSDVRLRS LI +
Sbjct: 385 SRSDVRLRSSLIQV 426
Score = 24.9 bits (48), Expect(6) = 5e-053
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 81 QIRCTSPFFSXSN 43
QIRCTS FFS ++
Sbjct: 387 QIRCTSSFFSYTS 425
Score = 24.9 bits (48), Expect(4) = 1e-034
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 221 RPEDLGSPNQLVIVF 177
R +DLGS NQLV VF
Sbjct: 253 R*KDLGSSNQLVSVF 297
Score = 24.9 bits (48), Expect(7) = 9e-049
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 37 LVITXRKERRRTSDLE 84
++ R+ERRRTSDL+
Sbjct: 431 VITCIREERRRTSDLD 384
Score = 24.4 bits (47), Expect(4) = 3e-040
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 227 EPAMEEQQHL 198
Score = 24.0 bits (46), Expect(7) = 9e-049
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 254 RTPIHLAHI 228
Score = 24.0 bits (46), Expect(7) = 3e-055
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 258 LTHTHSFSSY 229
Score = 24.0 bits (46), Expect(6) = 5e-053
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 227 QYELNEWVC 253
Score = 22.6 bits (43), Expect(6) = 5e-053
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 59 SFLIVITRHNLP*SLQDP 6
S + VITR N+ SLQ P
Sbjct: 412 SLIQVITRQNVSCSLQSP 465
Score = 22.1 bits (42), Expect(6) = 2e-046
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 228 NMS*MNGCAL 257
>gb|CW098046.1|CW098046 104_464_11002794_148_34367_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002794, DNA
sequence
Length = 660
Score = 199 bits (428), Expect = 5e-050
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = -3 / -2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SC
Sbjct: 245 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSC 66
Query: 537 CNYR*QSEAKDCWTLSSLHHT 475
CNYR* SEAKDCWTLSSLHHT
Sbjct: 65 CNYR*LSEAKDCWTLSSLHHT 3
Score = 168 bits (362), Expect = 7e-041
Identities = 71/84 (84%), Positives = 75/84 (89%)
Frame = +2 / +1
Query: 473 GV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV**FSRQPYWQNFQL 652
GV**RED VQQS ASL YL*LQQD *PR NLSHKHSICLGD**WAV** + QPYWQ FQL
Sbjct: 1 GV**REDKVQQSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV**LNTQPYWQKFQL 180
Query: 653 WEYWTGFVELNFSTHRPMLTSSLV 724
WEYWTGFV LNFSTHRP+LTSS++
Sbjct: 181 WEYWTGFVALNFSTHRPILTSSIL 252
Score = 147 bits (316), Expect = 2e-034
Identities = 64/83 (77%), Positives = 68/83 (81%)
Frame = -1 / -3
Query: 722 RGKM*AWAYGSRSSIQQILSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRH 543
R KM* W YG R+S+QQ LSNIPTAG+SAS VA TTT+PTISH GRCCACGIS SVV H
Sbjct: 250 RWKM*VWVYGLRNSMQQSLSNIPTAGTSASMVACSTTTQPTISHLGRCCACGIS*SVVSH 71
Query: 542 PAVTTDSRVKLRIAGRCPLFIIP 474
PAVTTDS K RIAG CPLFIIP
Sbjct: 70 PAVTTDS*AKRRIAGLCPLFIIP 2
Score = 145 bits (311), Expect = 8e-034
Identities = 64/83 (77%), Positives = 67/83 (80%)
Frame = +3 / +2
Query: 474 GYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSGPCSSSPGNRTGRTSSC 653
GYDEERT SSNP L AICSYSRM DHG TYPTSTASA VTDSG CSS N TGR+SSC
Sbjct: 2 GYDEERTKSSNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSGLCSS*TRNHTGRSSSC 181
Query: 654 GNIGQDLLN*TSRPIGPCLHLPS 722
GNIGQ LL+* S+PI P LHLPS
Sbjct: 182 GNIGQALLH*ISQPIDPYLHLPS 250
Score = 140 bits (301), Expect = 2e-032
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +1 / +3
Query: 475 GMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LIVGRVVVLQATVLAELPAV 654
GMMKRGQ PAIL F LSVVTAG LTTDQLIPQAQHLP *LIVG VVV AT+LAE+PAV
Sbjct: 3 GMMKRGQSPAILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LIVGCVVVEHATILAEVPAV 182
Query: 655 GILDRIC*IELLDP*AHAYIF 717
GILDR+C IE L+P* H YIF
Sbjct: 183 GILDRLCCIEFLNP*THTYIF 245
Score = 139 bits (298), Expect = 5e-032
Identities = 63/83 (75%), Positives = 70/83 (84%)
Frame = -2 / -1
Query: 721 EGRCKHGPMGREVQFNKSCPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGI 542
+GRCK+G MG E+Q NK+CPIFPQLE+LPV L +LLH PLSVT ADAVLVG*V PWS I
Sbjct: 249 DGRCKYGSMG*EIQCNKACPIFPQLELLPVWLRVQLLHSPLSVT*ADAVLVG*VDPWSAI 70
Query: 541 LL*LQIAE*S*GLLDAVLSSSYP 473
LL*LQIA+ S GLLD VLSSSYP
Sbjct: 69 LL*LQIAKRSEGLLDFVLSSSYP 1
>gb|BG050366.1|BG050366 FM1_53_B07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 366
Score = 176 bits (379), Expect(3) = 3e-046
Identities = 68/88 (77%), Positives = 71/88 (80%)
Frame = -3 / +1
Query: 666 VQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASCCNYR*QSEAKDCWTLSS 487
VQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLWDKL+RGQ SCCNYR* SEAKD WTLSS
Sbjct: 4 VQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLWDKLIRGQPSCCNYR*LSEAKDFWTLSS 183
Query: 486 LHHTPARFRSVGWYFLFRHNRRCCCSSV 403
LHHTPA F VGWY F + R SV
Sbjct: 184 LHHTPAMFSLVGWYSPF*SDHRIDIDSV 267
Score = 149 bits (321), Expect(4) = 4e-043
Identities = 63/78 (80%), Positives = 68/78 (87%)
Frame = +2 / -2
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQDA*PRTNLSHKHSICLGD**WAV* 613
+K +YQPT LN+AGV**RED VQ+S ASL YL*LQQD *PR NLSHKHSICLGD**WAV*
Sbjct: 236 QKGEYQPTKLNMAGV**REDKVQKSFASLSYL*LQQDG*PRINLSHKHSICLGD**WAV* 57
Query: 614 *FSRQPYWQNFQLWEYWT 667
* + QPYWQ FQLWEYWT
Sbjct: 56 *LNTQPYWQKFQLWEYWT 3
Score = 143 bits (306), Expect(4) = 1e-037
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3 / -3
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRMPDHGPTYPTSTASAWVTDSG 605
D ++KENTSQP *TWLGYDEERT S NP L AICSYSRM DHG TYPTSTASA VTDSG
Sbjct: 244 DRIKKENTSQPN*TWLGYDEERTKSRNPSLRLAICSYSRMADHGSTYPTSTASA*VTDSG 65
Query: 606 PCSSSPGNRTGRTSSCGNIGQ 668
SS N TGR+SSCGNIGQ
Sbjct: 64 LYSS*TRNHTGRSSSCGNIGQ 2
Score = 140 bits (300), Expect(3) = 7e-034
Identities = 62/83 (74%), Positives = 69/83 (83%)
Frame = +1 / -1
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCLTTDQLIPQAQHLPG*LI 600
P I SK++IPAN+ K GWGMMKRGQ P IL F LSVVTAG LTTDQLIPQAQHLP *LI
Sbjct: 249 PVIGSKRRIPANQTKHGWGMMKRGQSPEILRFA*LSVVTAGWLTTDQLIPQAQHLPR*LI 70
Query: 601 VGRVVVLQATVLAELPAVGILDR 669
VG +VV AT+LAE+PAVGILD+
Sbjct: 69 VGCIVVEHATILAEVPAVGILDK 1
Score = 139 bits (298), Expect(4) = 1e-037
Identities = 62/83 (74%), Positives = 65/83 (78%)
Frame = -1 / +2
Query: 668 LSNIPTAGSSASTVAWRTTTRPTISHPGRCCACGISWSVVRHPAVTTDSRVKLRIAGRCP 489
LSNIPTAG+SAS VA TT +PTISH GRCCACGIS SVV HPAVTTDS K RI+G CP
Sbjct: 2 LSNIPTAGTSASMVACSTTIQPTISHLGRCCACGIS*SVVSHPAVTTDS*AKRRISGLCP 181
Query: 488 LFIIPQPGLGRLAGIFFFDTIVG 420
LFIIPQP L LAGI FD I G
Sbjct: 182 LFIIPQPCLVWLAGILLFDPITG 250
Score = 128 bits (275), Expect(2) = 3e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = -2 / +3
Query: 667 CPIFPQLEVLPVRLPGELLHGPLSVTQADAVLVG*VGPWSGILL*LQIAE*S*GLLDAVL 488
CPIFPQLE+LPV L +LL+ PLSVT ADAVLVG*V PWS ILL*LQIA+ S G LD VL
Sbjct: 3 CPIFPQLELLPVWLRVQLLYSPLSVT*ADAVLVG*VDPWSAILL*LQIAKRSEGFLDFVL 182
Query: 487 SSSYPSQV*VGWLVFSFSTQS 425
SSSYPS V* GWLVFSF +S
Sbjct: 183 SSSYPSHV*FGWLVFSFLIRS 245
Score = 29.9 bits (59), Expect(4) = 4e-043
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -3
Query: 185 *PTGWGFLNLQA 220
*PTGW FLNLQA
Sbjct: 364 *PTGWSFLNLQA 329
Score = 28.1 bits (55), Expect(4) = 1e-037
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 267 RCCCSSMAGS 296
Score = 26.3 bits (51), Expect(4) = 4e-043
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 351 SLNLLPHTHAFSSY 392
S + LPH H+FSSY
Sbjct: 338 SSSFLPHIHSFSSY 297
Score = 25.8 bits (50), Expect(3) = 3e-046
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 217 LKI*EAPTSWL 185
LKI*+APTSWL
Sbjct: 332 LKI*KAPTSWL 364
Score = 25.8 bits (50), Expect(4) = 4e-043
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1 / -2
Query: 394 *ASNGGATTPTI 429
*AS+GGATTPT+
Sbjct: 296 *ASHGGATTPTL 261
Score = 24.4 bits (47), Expect(2) = 3e-030
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 425 VGVVAPPLLAQ 393
VGVVAPP LAQ
Sbjct: 265 VGVVAPPWLAQ 297
Score = 24.4 bits (47), Expect(4) = 1e-037
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 295 EPAMEEQQHL 266
Score = 23.5 bits (45), Expect(4) = 1e-037
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 219 A*RFRKPQPVG 187
A*RFRK QPVG
Sbjct: 330 A*RFRKLQPVG 362
Score = 23.5 bits (45), Expect(3) = 3e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +2
Query: 393 NMS*MHGCAV 364
NMS*M+GCAV
Sbjct: 296 NMS*MNGCAV 325
Score = 23.5 bits (45), Expect(4) = 1e-037
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 364 YRTPMHLAHI 393
YRT +HLAHI
Sbjct: 325 YRTSIHLAHI 296
Score = 22.6 bits (43), Expect(4) = 1e-037
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 394 KYELNAWVC 368
+YELN W+C
Sbjct: 295 QYELNEWMC 321
Score = 22.6 bits (43), Expect(4) = 1e-037
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / -2
Query: 184 ITNWLGLPKSSGLV 225
+TNWL L KSS +
Sbjct: 365 LTNWLELSKSSSFL 324
Score = 22.1 bits (42), Expect(3) = 7e-034
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 393 LSQQRRSNNTY 425
LSQ RSNNTY
Sbjct: 297 LSQPWRSNNTY 265
Score = 21.7 bits (41), Expect(3) = 7e-034
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 186 NQLVGAS*IFRPS 224
NQLVGA *IF+ S
Sbjct: 363 NQLVGAF*IFKLS 325
>gb|CW152073.1|CW152073 104_553_11144294_116_36325_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144294, DNA
sequence
Length = 698
Score = 83.1 bits (175), Expect(6) = 3e-040
Identities = 34/49 (69%), Positives = 35/49 (71%)
Frame = -3 / -1
Query: 549 QASCCNYR*QSEAKDCWTLSSLHHTPARFRSVGWYFLFRHNRRCCCSSV 403
Q SCCNYR* SEAKDCWTLSSLHHTPA F VGWY F + R SV
Sbjct: 698 QPSCCNYR*LSEAKDCWTLSSLHHTPAMFSLVGWYSPF*SDHRIDIDSV 552
Score = 78.0 bits (164), Expect(7) = 2e-045
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +3 / +2
Query: 426 DCVEKENTSQPT*TWLGYDEERTASSNP*LHSAICSYSRM 545
D ++KENTSQP *TWLGYDEERT SSNP L AICSYSRM
Sbjct: 575 DRIKKENTSQPN*TWLGYDEERTKSSNPSLRLAICSYSRM 694
Score = 74.4 bits (156), Expect(6) = 3e-040
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / -3
Query: 178 FTRSVLVQLWRWRPCSCN*SNFDVVGQIR 92
FTRS+LVQLWRWRPCSCN*SNFDVVGQIR
Sbjct: 456 FTRSLLVQLWRWRPCSCN*SNFDVVGQIR 370
Score = 72.1 bits (151), Expect(7) = 1e-038
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +1 / +3
Query: 421 PTIVSKKKIPANRPKPGWGMMKRGQRPAILSFTLLSVVTAGCL 549
P I SK++IPAN+ K GWGMMKRGQ PAIL F LSVVTAG L
Sbjct: 570 PVIGSKRRIPANQTKHGWGMMKRGQSPAILRFA*LSVVTAGWL 698
Score = 72.1 bits (151), Expect(6) = 2e-036
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / -1
Query: 180 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 91
FLHDLYWSNCGVGVLVLVIDPILM**ARLE
Sbjct: 458 FLHDLYWSNCGVGVLVLVIDPILM**ARLE 369
Score = 71.6 bits (150), Expect(7) = 2e-045
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / +2
Query: 93 LIWPTTSKLDQLQEQGRQRHNWTNTDRVK 179
LIWPTTSKLDQLQEQGRQRH+WTN DRVK
Sbjct: 371 LIWPTTSKLDQLQEQGRQRHSWTNKDRVK 457
Score = 71.2 bits (149), Expect(4) = 3e-029
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1 / +3
Query: 58 ERRRTSDLEYSL*SGLLHQNWINYKNKDANATIGPIQIV*K 180
E+ L ++ *SGLLHQNWINYKNKDANAT+GPI+IV*K
Sbjct: 336 EKNEDVHLIWTF*SGLLHQNWINYKNKDANATVGPIKIV*K 458
Score = 69.8 bits (146), Expect(6) = 2e-036
Identities = 31/42 (73%), Positives = 31/42 (73%)
Frame = -1 / -2
Query: 545 HPAVTTDSRVKLRIAGRCPLFIIPQPGLGRLAGIFFFDTIVG 420
HPAVTTDS K RIAG CPLFIIPQP L LAGI FD I G
Sbjct: 694 HPAVTTDS*AKRRIAGLCPLFIIPQPCLVWLAGILLFDPITG 569
Score = 68.0 bits (142), Expect(7) = 1e-038
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / +1
Query: 92 SNLAYYIKIGSITRTRTPTPQLDQYRSCK 178
SNLAYYIKIGSITRTRTPTPQLDQ RSCK
Sbjct: 370 SNLAYYIKIGSITRTRTPTPQLDQ*RSCK 456
Score = 63.8 bits (133), Expect(4) = 3e-029
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +2 / +1
Query: 434 RKRKYQPTDLNLAGV**REDSVQQSLASLCYL*LQQD 544
+K +YQPT LN+AGV**RED VQQS ASL YL*LQQD
Sbjct: 583 QKGEYQPTKLNMAGV**REDKVQQSFASLSYL*LQQD 693
Score = 62.5 bits (130), Expect(4) = 3e-025
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2 / -3
Query: 544 ILL*LQIAE*S*GLLDAVLSSSYPSQV*VGWLVFSFSTQS 425
ILL*LQIA+ S GLLD VLSSSYPS V* GWLVFSF +S
Sbjct: 693 ILL*LQIAKRSEGLLDFVLSSSYPSHV*FGWLVFSFLIRS 574
Score = 59.3 bits (123), Expect(4) = 3e-025
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / -2
Query: 179 FYTICIGPIVALASLFL*LIQF*CSRPD* 93
FYTI IGP VALASLFL*LIQF*CSRPD*
Sbjct: 457 FYTIFIGPTVALASLFL*LIQF*CSRPD* 371
Score = 31.3 bits (62), Expect(7) = 2e-045
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 7 GSCKDQGKLCLVITXRKERRR 69
G CK+Q CLVIT +E RR
Sbjct: 287 GDCKEQETFCLVITCIREERR 349
Score = 29.0 bits (57), Expect(7) = 2e-045
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 44 LLXEKNGDVHLIWNIPSNLAY 106
L+ EKN DVHLIW S L +
Sbjct: 327 LV*EKNEDVHLIWTF*SGLLH 389
Score = 29.0 bits (57), Expect(6) = 3e-040
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / -1
Query: 214 KI*EAPTSWLLF 179
KI*EAPTSWL+F
Sbjct: 491 KI*EAPTSWLVF 456
Score = 29.0 bits (57), Expect(6) = 2e-036
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 423 RCCCSSVAGS 394
RCCCSS+AGS
Sbjct: 552 RCCCSSIAGS 523
Score = 28.6 bits (56), Expect(7) = 2e-045
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 178 KTITNWLGLPKS 213
KT+TNWL LPKS
Sbjct: 455 KTLTNWLELPKS 490
Score = 28.1 bits (55), Expect(7) = 2e-045
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 394 *ASNGGATTPTI 429
*ASNGGATTPT+
Sbjct: 523 *ASNGGATTPTL 558
Score = 28.1 bits (55), Expect(7) = 1e-038
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 177 KNNNQLVGAS*IF 215
KN NQLVGAS*IF
Sbjct: 454 KNTNQLVGAS*IF 492
Score = 28.1 bits (55), Expect(4) = 3e-029
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 179 KQ*PTGWGFLNL 214
K *PTGW FLNL
Sbjct: 456 KH*PTGWSFLNL 491
Score = 27.2 bits (53), Expect(4) = 3e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 425 VGVVAPPLLAQ 393
VGVVAPPLLAQ
Sbjct: 554 VGVVAPPLLAQ 522
Score = 26.3 bits (51), Expect(6) = 2e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 213 RFRKPQPVGYCF 178
RFRK QPVG CF
Sbjct: 490 RFRKLQPVG*CF 455
Score = 25.4 bits (49), Expect(7) = 1e-038
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 6 RILQRSGQIVSSYYYXKR 59
R LQR+G I+SSY KR
Sbjct: 286 RRLQRAGNILSSYNLYKR 339
Score = 24.9 bits (48), Expect(7) = 1e-038
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 393 LSQQRRSNNTY 425
LSQQ RSNNTY
Sbjct: 522 LSQQWRSNNTY 554
Score = 24.9 bits (48), Expect(6) = 3e-040
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / -2
Query: 81 QIRCTSPFFSXSN 43
QIRCTS FFS ++
Sbjct: 364 QIRCTSSFFSYTS 326
Score = 24.9 bits (48), Expect(6) = 2e-036
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 83 SRSDVRLRSFLIVI 42
SRSDVRLRS LI +
Sbjct: 366 SRSDVRLRSSLIQV 325
Score = 24.9 bits (48), Expect(7) = 1e-038
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 37 LVITXRKERRRTSDLE 84
++ R+ERRRTSDL+
Sbjct: 320 VITCIREERRRTSDLD 367
Score = 24.9 bits (48), Expect(4) = 3e-025
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 221 RPEDLGSPNQLVIVF 177
R +DLGS NQLV VF
Sbjct: 498 R*KDLGSSNQLVSVF 454
Score = 24.4 bits (47), Expect(4) = 3e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 395 EPATEEQQHL 424
EPA EEQQHL
Sbjct: 524 EPAMEEQQHL 553
Score = 24.0 bits (46), Expect(7) = 1e-038
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 367 RTPMHLAHI 393
RTP+HLAHI
Sbjct: 497 RTPIHLAHI 523
Score = 24.0 bits (46), Expect(7) = 2e-045
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 363 LPHTHAFSSY 392
L HTH+FSSY
Sbjct: 493 LTHTHSFSSY 522
Score = 24.0 bits (46), Expect(6) = 3e-040
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 394 KYELNAWVC 368
+YELN WVC
Sbjct: 524 QYELNEWVC 498
Score = 22.6 bits (43), Expect(6) = 3e-040
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 59 SFLIVITRHNLP*SLQDP 6
S + VITR N+ SLQ P
Sbjct: 339 SLIQVITRQNVSCSLQSP 286
Score = 22.1 bits (42), Expect(6) = 2e-036
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 393 NMS*MHGCAV 364
NMS*M+GCA+
Sbjct: 523 NMS*MNGCAL 494
>gb|BZ350980.1|BZ350980 ht64b02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht64b02 5', DNA sequence
Length = 631
Score = 127 bits (272), Expect = 2e-028
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -3 / +3
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVS+GLWVE+FN T PV+Y HS KFC +GC+ +YYTAHYQSPR MLC+W KL+ G+ C
Sbjct: 366 EDVSLGLWVEQFNRTRPVEYIHSGKFCPFGCVADYYTAHYQSPRLMLCMWQKLLEGRPDC 545
Query: 537 CNYR*Q 520
CN R*Q
Sbjct: 546 CNMR*Q 563
>gb|CF484228.1|CF484228 POL1_4_A06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_4_A06_A002 3', mRNA sequence
Length = 661
Score = 127 bits (272), Expect = 2e-028
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -3 / +2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVS+GLWVE+FN T PV+Y HS KFC +GC+ +YYTAHYQSPR MLC+W KL+ G+ C
Sbjct: 125 EDVSLGLWVEQFNRTRPVEYIHSGKFCPFGCVADYYTAHYQSPRLMLCMWQKLLEGRPDC 304
Query: 537 CNYR*Q 520
CN R*Q
Sbjct: 305 CNMR*Q 322
>gb|CF488926.1|CF488926 POL1_53_C07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_53_C07_A002 3', mRNA sequence
Length = 760
Score = 127 bits (272), Expect = 2e-028
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -3 / +1
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVS+GLWVE+FN T PV+Y HS KFC +GC+ +YYTAHYQSPR MLC+W KL+ G+ C
Sbjct: 418 EDVSLGLWVEQFNRTRPVEYIHSGKFCPFGCVADYYTAHYQSPRLMLCMWQKLLEGRPDC 597
Query: 537 CNYR*Q 520
CN R*Q
Sbjct: 598 CNMR*Q 615
>gb|CW486925.1|CW486925 fsbb001f252h17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252h17, DNA
sequence
Length = 703
Score = 126 bits (270), Expect = 3e-028
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = -3 / +2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLW 568
EDVSMGLWVEKFN+T PVQYSHSW FCQYGC+ NYYTAHYQSPRQMLCLW
Sbjct: 554 EDVSMGLWVEKFNATKPVQYSHSWNFCQYGCVFNYYTAHYQSPRQMLCLW 703
Score = 116 bits (247), Expect = 5e-025
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +2 / -2
Query: 569 HKHSICLGD**WAV**FSRQPYWQNFQLWEYWTGFVELNFSTHRPMLTSSLV 724
HKHSICLGD**WAV** + QPYWQ FQLWEYWTGFV LNFSTHRP+LTSS++
Sbjct: 702 HKHSICLGD**WAV**LNTQPYWQKFQLWEYWTGFVALNFSTHRPILTSSIL 547
>gb|CN127712.1|CN127712 RHOH1_24_D05.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_D05_A002 5', mRNA sequence
Length = 844
Score = 126 bits (269), Expect = 5e-028
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = -3 / +2
Query: 717 EDVSMGLWVEKFNSTNPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASC 538
EDVSMG+WVE FN++ PVQY HSW+FCQ+GC++ Y TAHYQSP MLCLW+KL G+ C
Sbjct: 377 EDVSMGMWVEDFNASAPVQYVHSWRFCQFGCVDYYLTAHYQSPWHMLCLWEKLSAGRRDC 556
Query: 537 CNY 529
CNY
Sbjct: 557 CNY 565
>gb|CF072395.1|CF072395 FE1_2_F08.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_2_F08_A002 5', mRNA sequence
Length = 658
Score = 84.0 bits (177), Expect(2) = 9e-021
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = -3 / -3
Query: 672 NPVQYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDKLVRGQASCCNYR*QSEAK 508
+PV+Y H +F Q GC + Y+TAHYQSP+ M+CLW KL G CCN R*Q A+
Sbjct: 518 SPVEYLHDLRFYQPGCFDGYFTAHYQSPQHMICLWRKLQAGSTQCCNVR*QWTAQ 354
Score = 37.3 bits (75), Expect(2) = 9e-021
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3 / -3
Query: 717 EDVSMGLWVEKFNST 673
EDVSMG+WVEKFN+T
Sbjct: 566 EDVSMGMWVEKFNTT 522
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,022,702,905
Number of Sequences: 832831
Number of extensions: 16262486
Number of successful extensions: 123542
Number of sequences better than 1.0e-020: 19
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22218158534
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)