TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748501.2.2
(993 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN127879.1|CN127879 RHOH1_25_D05.g1_A002 Acid- and alkal... 167 8e-073
gb|CN129628.1|CN129628 RHOH1_36_B03.g1_A002 Acid- and alkal... 167 1e-070
gb|CN129542.1|CN129542 RHOH1_36_B03.b3_A002 Acid- and alkal... 167 1e-069
gb|CN140719.1|CN140719 OX1_46_B10.g1_A002 Oxidatively-stres... 141 2e-064
gb|CN127798.1|CN127798 RHOH1_25_D05.b1_A002 Acid- and alkal... 167 2e-062
gb|BE360223.1|BE360223 DG1_62_C07.b1_A002 Dark Grown 1 (DG1... 128 2e-053
gb|AW671472.1|AW671472 LG1_347_C12.b1_A002 Light Grown 1 (L... 128 2e-051
gb|BE360993.1|BE360993 DG1_68_E11.g1_A002 Dark Grown 1 (DG1... 167 9e-051
gb|BE360326.1|BE360326 DG1_62_C07.g1_A002 Dark Grown 1 (DG1... 167 1e-049
gb|CF430008.1|CF430008 PH1_25_B05.g1_A002 Phosphorous-defic... 167 2e-049
gb|AW922579.1|AW922579 DG1_45_F02.g1_A002 Dark Grown 1 (DG1... 167 2e-048
gb|CW071272.1|CW071272 104_323_10591451_114_30471 Sorghum m... 110 1e-045
gb|CW131966.1|CW131966 104_515_11115958_116_34797_093 Sorgh... 132 1e-045
gb|CW385134.1|CW385134 fsbb001f068h22k0 Sorghum methylation... 129 3e-044
gb|CW109957.1|CW109957 104_482_11103418_116_34510_039 Sorgh... 131 3e-043
gb|CW376890.1|CW376890 fsbb001f054p19f0 Sorghum methylation... 110 2e-042
gb|AW287022.2|AW287022 LG1_264_E07.b1_A002 Light Grown 1 (L... 128 3e-041
gb|CW417257.1|CW417257 fsbb001f120c20k0 Sorghum methylation... 129 2e-040
gb|BG241604.1|BG241604 RHIZ2_17_F04.g1_A003 Rhizome2 (RHIZ2... 167 2e-040
gb|CF427234.1|CF427234 PH1_4_F06.b1_A002 Phosphorous-defici... 167 2e-040
gb|BF481871.1|BF481871 FM1_22_D09.g1_A003 Floral-Induced Me... 165 1e-039
gb|CW042854.1|CW042854 104_276_10507318_116_30489 Sorghum m... 101 8e-037
gb|CW376891.1|CW376891 fsbb001f054p19k0 Sorghum methylation... 110 5e-036
gb|CW497105.1|CW497105 fsbb001f289k18f0 Sorghum methylation... 93 3e-035
gb|BF586546.1|BF586546 FM1_29_E09.g1_A003 Floral-Induced Me... 149 6e-035
gb|CW146141.1|CW146141 104_539_11138833_116_34988_015 Sorgh... 71 2e-032
gb|CW146142.1|CW146142 104_539_11138833_148_34984_015 Sorgh... 129 7e-029
gb|CW150217.1|CW150217 104_549_11142910_116_36306_087 Sorgh... 129 7e-029
gb|CW150218.1|CW150218 104_549_11142910_148_36305_087 Sorgh... 129 7e-029
gb|CW188249.1|CW188249 104_608_11172930_116_36732_079 Sorgh... 129 7e-029
gb|CW188250.1|CW188250 104_608_11172930_148_36731_079 Sorgh... 129 7e-029
gb|CF427262.1|CF427262 PH1_4_F06.g1_A002 Phosphorous-defici... 125 1e-027
gb|CW022450.1|CW022450 104_161_10431848_5_30007 Sorghum met... 62 7e-027
gb|CW390673.1|CW390673 fsbb001f076g23f0 Sorghum methylation... 117 3e-026
gb|CW385133.1|CW385133 fsbb001f068h22f0 Sorghum methylation... 71 4e-026
gb|CW071276.1|CW071276 104_323_10591452_116_30437 Sorghum m... 110 1e-025
gb|CW131967.1|CW131967 104_515_11115958_148_34793_093 Sorgh... 110 1e-025
gb|CW042853.1|CW042853 104_276_10507318_114_30483 Sorghum m... 110 1e-025
gb|CW472155.1|CW472155 fsbb001f226o15k0 Sorghum methylation... 108 1e-023
gb|CW094129.1|CW094129 104_457_11000145_116_37477_039 Sorgh... 73 4e-023
gb|CW147347.1|CW147347 104_540_11139465_116_34996_037 Sorgh... 79 4e-023
gb|CW391703.1|CW391703 fsbb001f077p12k0 Sorghum methylation... 79 4e-023
gb|CW021762.1|CW021762 104_160_10431448_1_30004 Sorghum met... 109 9e-023
gb|CW454038.1|CW454038 fsbb001f198e20k0 Sorghum methylation... 109 9e-023
gb|BF586623.1|BF586623 FM1_29_E09.b1_A003 Floral-Induced Me... 105 2e-021
gb|CW089052.1|CW089052 104_434_10948479_114_32601_060 Sorgh... 104 2e-021
>gb|CN127879.1|CN127879 RHOH1_25_D05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_D05_A002 5', mRNA sequence
Length = 692
Score = 167 bits (360), Expect(2) = 8e-073
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 336 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 515
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 516 ALEGILYCKHHFSQLFKEKGSYNHLIK 596
Score = 128 bits (274), Expect(2) = 8e-073
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DGV +H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 69 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 248
Query: 254 EQLFKETGSFSKNF 295
EQLFKETGS++K+F
Sbjct: 249 EQLFKETGSYNKSF 290
Score = 109 bits (232), Expect = 9e-023
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +2 / +3
Query: 362 FSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF 541
FSGTQ KC C KTVYP+++L+ +G ++H+SCFKC H L+ S+Y++ GV YCK HF
Sbjct: 69 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 248
Query: 542 AQLFMEKGSYS 574
QLF E GSY+
Sbjct: 249 EQLFKETGSYN 281
Score = 103 bits (219), Expect = 5e-021
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 372 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 551
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 552 SQLFKEKGSYN 584
Score = 100 bits (213), Expect(2) = 5e-042
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 592 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 413
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 412 VLPQVAHLSCVPENILAALLGDLVSS 335
Score = 92.7 bits (196), Expect(2) = 5e-042
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SCSKW LQY TPS EE*L ER+ LQ HLK W TPS S+ +T
Sbjct: 289 KLLL*LPVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWKATPSVESWSIGYT 110
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 109 VLVHTLHFCCVPL 71
>gb|CN129628.1|CN129628 RHOH1_36_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_B03_A002 5', mRNA sequence
Length = 784
Score = 167 bits (360), Expect(2) = 1e-070
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 380 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 559
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 560 ALEGILYCKHHFSQLFKEKGSYNHLIK 640
Score = 121 bits (258), Expect(2) = 1e-070
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC KTV+ +D L+ DGV H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 113 FSGTQQKCKVRTKTVYPMDQLSTDGVALHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 292
Query: 254 EQLFKETGSFSKNF 295
EQLFKETGS++K+F
Sbjct: 293 EQLFKETGSYNKSF 334
Score = 103 bits (219), Expect = 5e-021
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 416 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 595
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 596 SQLFKEKGSYN 628
Score = 100 bits (213), Expect(2) = 6e-041
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 636 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 457
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 456 VLPQVAHLSCVPENILAALLGDLVSS 379
Score = 89.0 bits (188), Expect(2) = 6e-041
Identities = 41/73 (56%), Positives = 46/73 (63%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SCSKW LQY TPS EE*L ER+ LQ HLK W TPS S+ +T
Sbjct: 333 KLLL*LPVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWRATPSVESWSIGYT 154
Query: 114 VLSHSAHLSCVPV 76
VL + H CVP+
Sbjct: 153 VLVRTLHFCCVPL 115
>gb|CN129542.1|CN129542 RHOH1_36_B03.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_B03_A002 3', mRNA sequence
Length = 819
Score = 167 bits (360), Expect(2) = 1e-069
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 278 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 457
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 458 ALEGILYCKHHFSQLFKEKGSYNHLIK 538
Score = 117 bits (251), Expect(2) = 1e-069
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC KTV+ +D L+ GV H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 11 FSGTQQKCKVRTKTVYPMDQLSTXGVALHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 190
Query: 254 EQLFKETGSFSKNF 295
EQLFKETGS++K+F
Sbjct: 191 EQLFKETGSYNKSF 232
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 314 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 493
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 494 SQLFKEKGSYN 526
Score = 100 bits (213), Expect(2) = 6e-041
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 534 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 355
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 354 VLPQVAHLSCVPENILAALLGDLVSS 277
Score = 89.0 bits (188), Expect(2) = 6e-041
Identities = 41/73 (56%), Positives = 46/73 (63%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SCSKW LQY TPS EE*L ER+ LQ HLK W TPS S+ +T
Sbjct: 231 KLLL*LPVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWRATPSVESWSIGYT 52
Query: 114 VLSHSAHLSCVPV 76
VL + H CVP+
Sbjct: 51 VLVRTLHFCCVPL 13
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 601 IVPFQQWGFEGESWEASCF 657
>gb|CN140719.1|CN140719 OX1_46_B10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_B10_A002 5', mRNA sequence
Length = 544
Score = 141 bits (302), Expect(2) = 2e-064
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 325 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 504
Query: 506 ALNGVLYCKIHFA 544
AL G+LYCK HF+
Sbjct: 505 ALEGILYCKHHFS 543
Score = 126 bits (270), Expect(2) = 2e-064
Identities = 49/89 (55%), Positives = 63/89 (70%)
Frame = +2 / +1
Query: 29 RACSHRQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMC 208
R S +AG F+GTQ KC C KTV+ +D L+ DGV +H++CFKC HCK LS+
Sbjct: 13 RGKSEARAGELGEKMFSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLS 192
Query: 209 SYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
+YSS +GV YCK HFEQLFKET S++K+F
Sbjct: 193 NYSSFEGVPYCKAHFEQLFKETVSYNKSF 279
Score = 105 bits (223), Expect = 2e-021
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +2 / +1
Query: 362 FSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF 541
FSGTQ KC C KTVYP+++L+ +G ++H+SCFKC H L+ S+Y++ GV YCK HF
Sbjct: 58 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 237
Query: 542 AQLFMEKGSYS 574
QLF E SY+
Sbjct: 238 EQLFKETVSYN 270
Score = 90.0 bits (190), Expect(2) = 1e-035
Identities = 43/82 (52%), Positives = 49/82 (59%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L L VSL SCSKW LQY TPS EE*L ER+ LQ HLK W TPS S+ +T
Sbjct: 278 KLLL*LTVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWKATPSVESWSIGYT 99
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VL H+ H CVP+ +PA
Sbjct: 98 VLVHTLHFCCVPLNIFSPSSPA 33
Score = 81.7 bits (172), Expect(2) = 1e-035
Identities = 43/72 (59%), Positives = 44/72 (61%)
Frame = -1 / -3
Query: 540 KWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPEN 361
KW LQ R P AA* E V QPP EHLK LW S V FS GY V Q AHLS VPEN
Sbjct: 539 KWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYAVLPQVAHLSCVPEN 360
Query: 360 ADDSLLGALVSS 325
+LLG LVSS
Sbjct: 359 ILAALLGDLVSS 324
>gb|CN127798.1|CN127798 RHOH1_25_D05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_D05_A002 3', mRNA sequence
Length = 720
Score = 167 bits (360), Expect(2) = 2e-062
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 194 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 373
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 374 ALEGILYCKHHFSQLFKEKGSYNHLIK 454
Score = 103 bits (219), Expect = 5e-021
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 230 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 409
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 410 SQLFKEKGSYN 442
Score = 100 bits (213), Expect(2) = 3e-034
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 450 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 271
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 270 VLPQVAHLSCVPENILAALLGDLVSS 193
Score = 93.6 bits (198), Expect(2) = 2e-062
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +2 / +2
Query: 149 VTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
V +H++CFKC HCK LS+ +YSS +GV YCK HFEQLFKETGS++K+F
Sbjct: 2 VAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHFEQLFKETGSYNKSF 148
Score = 66.6 bits (139), Expect(2) = 3e-034
Identities = 31/49 (63%), Positives = 32/49 (65%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VT 148
K L LPVSL SCSKW LQY TPS EE*L ER+ LQ HLK W T
Sbjct: 147 KLLL*LPVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWKAT 1
>gb|BE360223.1|BE360223 DG1_62_C07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 128 bits (274), Expect(2) = 2e-053
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DGV +H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 149 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 328
Query: 254 EQLFKETGSFSKNF 295
EQLFKETGS++K+F
Sbjct: 329 EQLFKETGSYNKSF 370
Score = 109 bits (232), Expect = 9e-023
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +2 / +2
Query: 362 FSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF 541
FSGTQ KC C KTVYP+++L+ +G ++H+SCFKC H L+ S+Y++ GV YCK HF
Sbjct: 149 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 328
Query: 542 AQLFMEKGSYS 574
QLF E GSY+
Sbjct: 329 EQLFKETGSYN 361
Score = 102 bits (218), Expect(2) = 2e-053
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGG 478
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGG
Sbjct: 416 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGG 568
Score = 92.7 bits (196), Expect(2) = 1e-030
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SCSKW LQY TPS EE*L ER+ LQ HLK W TPS S+ +T
Sbjct: 369 KLLL*LPVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWKATPSVESWSIGYT 190
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 189 VLVHTLHFCCVPL 151
Score = 62.5 bits (130), Expect(2) = 1e-030
Identities = 31/51 (60%), Positives = 32/51 (62%)
Frame = -1 / -1
Query: 477 PPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
PP EHLK LW S V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 567 PPWEHLKHDLWYAFSSTVTFSRGYAVLPQVAHLSCVPENILAALLGDLVSS 415
>gb|AW671472.1|AW671472 LG1_347_C12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 674
Score = 128 bits (274), Expect(2) = 2e-051
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 211 GPAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGV 390
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 391 LYCRPHFDQLFKRTGSLDKSF 453
Score = 96.4 bits (204), Expect(2) = 2e-051
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +2 / +1
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 508
K+SSAF+GT++KC C KTVYP+EK+T+ YHKSCFKC HGGC ++ S+Y A
Sbjct: 511 KVSSAFAGTREKCVGCSKTVYPIEKVTVNNTMYHKSCFKCCHGGCTISPSNYIA 672
>gb|BE360993.1|BE360993 DG1_68_E11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 632
Score = 167 bits (360), Expect(2) = 9e-051
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 128 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 307
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 308 ALEGILYCKHHFSQLFKEKGSYNHLIK 388
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 164 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 343
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 344 SQLFKEKGSYN 376
Score = 100 bits (213), Expect(2) = 1e-028
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 384 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 205
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 204 VLPQVAHLSCVPENILAALLGDLVSS 127
Score = 54.7 bits (113), Expect(2) = 9e-051
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2 / +2
Query: 215 SSMDGVLYCKTHFEQLFKETGSFSKNF 295
SS +GV YCK HFEQLFKETGS++K+F
Sbjct: 2 SSFEGVPYCKAHFEQLFKETGSYNKSF 82
Score = 47.8 bits (98), Expect(2) = 1e-028
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE 214
K L LPVSL SCSKW LQY TPS EE
Sbjct: 81 KLLL*LPVSLNSCSKWALQYGTPSNEE 1
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 451 IVPFQQWGFEGESWEASCF 507
>gb|BE360326.1|BE360326 DG1_62_C07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 632
Score = 167 bits (360), Expect(2) = 1e-049
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 120 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 299
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 300 ALEGILYCKHHFSQLFKEKGSYNHLIK 380
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 156 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 335
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 336 SQLFKEKGSYN 368
Score = 100 bits (213), Expect(2) = 2e-027
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 376 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 197
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 196 VLPQVAHLSCVPENILAALLGDLVSS 119
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HFEQLFKETGS++K+F
Sbjct: 3 EGVPYCKAHFEQLFKETGSYNKSF 74
Score = 44.1 bits (90), Expect(2) = 2e-027
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPS 223
K L LPVSL SCSKW LQY TPS
Sbjct: 73 KLLL*LPVSLNSCSKWALQYGTPS 2
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +2
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 443 IVPFQQWGFEGESWEASCF 499
>gb|CF430008.1|CF430008 PH1_25_B05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_B05_A002 5', mRNA sequence
Length = 723
Score = 167 bits (360), Expect(2) = 2e-049
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 607 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 428
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 427 ALEGILYCKHHFSQLFKEKGSYNHLIK 347
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / -3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 571 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 392
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 391 SQLFKEKGSYN 359
Score = 100 bits (213), Expect(2) = 5e-027
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / +3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 351 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 530
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 531 VLPQVAHLSCVPENILAALLGDLVSS 608
Score = 50.1 bits (103), Expect(2) = 2e-049
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2 / -3
Query: 227 GVLYCKTHFEQLFKETGSFSKNF 295
GV YCK HFEQLFKETGS++K+F
Sbjct: 721 GVPYCKAHFEQLFKETGSYNKSF 653
Score = 42.3 bits (86), Expect(2) = 5e-027
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTP 226
K L LPVSL SCSKW LQY TP
Sbjct: 654 KLLL*LPVSLNSCSKWALQYGTP 722
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / -2
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 284 IVPFQQWGFEGESWEASCF 228
>gb|AW922579.1|AW922579 DG1_45_F02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 629
Score = 167 bits (360), Expect(2) = 2e-048
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 110 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 289
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 290 ALEGILYCKHHFSQLFKEKGSYNHLIK 370
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 146 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 325
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 326 SQLFKEKGSYN 358
Score = 100 bits (213), Expect(2) = 2e-025
Identities = 52/86 (60%), Positives = 54/86 (62%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S KW LQ R P AA* E V QPP EHLK LW S V FS GY
Sbjct: 366 IKWL*LPFSLKS*EKWCLQ*RMPSKAA*LEGVIAQPPWEHLKHDLWYAFSSTVTFSRGYA 187
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 186 VLPQVAHLSCVPENILAALLGDLVSS 109
Score = 46.9 bits (96), Expect(2) = 2e-048
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +2 / +2
Query: 236 YCKTHFEQLFKETGSFSKNF 295
YCK HFEQLFKETGS++K+F
Sbjct: 5 YCKAHFEQLFKETGSYNKSF 64
Score = 36.8 bits (74), Expect(2) = 2e-025
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQY 235
K L LPVSL SCSKW LQY
Sbjct: 63 KLLL*LPVSLNSCSKWALQY 4
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 433 IVPFQQWGFEGESWEASCF 489
>gb|CW071272.1|CW071272 104_323_10591451_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591451, DNA
sequence
Length = 734
Score = 110 bits (234), Expect(3) = 1e-045
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2 / -1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV YHKTCFKCSHCKGILS+
Sbjct: 512 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSV 378
Score = 105 bits (223), Expect(5) = 1e-035
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1 / +1
Query: 201 ERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
ERIPLQWLHLKHVLW*+TPSAVRRSMKWTVLSH+ HLSCVPVK+
Sbjct: 382 ERIPLQWLHLKHVLW*MTPSAVRRSMKWTVLSHAVHLSCVPVKD 513
Score = 92.7 bits (196), Expect(3) = 1e-045
Identities = 36/40 (90%), Positives = 36/40 (90%)
Frame = +2 / -1
Query: 185 CKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNFTPG 304
C G L MCSYSSMDGVLYCKTHFEQLFKETGSFSK FTPG
Sbjct: 239 CVGRLQMCSYSSMDGVLYCKTHFEQLFKETGSFSKKFTPG 120
Score = 37.7 bits (76), Expect(5) = 1e-035
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 567 LPFSMNSCAKWILQYRTP 514
LP S+ SC+KW+LQY TP
Sbjct: 145 LPVSLKSCSKWVLQYSTP 198
Score = 35.4 bits (71), Expect(5) = 1e-035
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / +2
Query: 236 TAHRPWKSSCTS 201
TAHRPWKSSCTS
Sbjct: 188 TAHRPWKSSCTS 223
Score = 27.6 bits (54), Expect(5) = 1e-035
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 47 ACGCTHALSPPD 12
ACGCTHAL P+
Sbjct: 525 ACGCTHALVAPN 560
Score = 24.9 bits (48), Expect(3) = 1e-045
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 12 IGRRECVRAATG 47
IG ECVRAATG
Sbjct: 560 IGGDECVRAATG 525
Score = 23.1 bits (44), Expect(5) = 1e-035
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +2
Query: 71 KTWCRRL 51
KTWCRRL
Sbjct: 509 KTWCRRL 529
>gb|CW131966.1|CW131966 104_515_11115958_116_34797_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115958, DNA
sequence
Length = 553
Score = 132 bits (282), Expect(3) = 1e-045
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = +2 / -3
Query: 419 KLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHM 580
+LTLEGE+YHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF QLFMEKGSY+HM
Sbjct: 167 QLTLEGEAYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHM 6
Score = 124 bits (266), Expect(2) = 3e-041
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / +1
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVN 421
F MWL*LPFSMNSC KWILQY+TPLSAA*EEVVRMQPPCEHLKQLLW* SPS+VN
Sbjct: 1 FFMWL*LPFSMNSCPKWILQYKTPLSAA*EEVVRMQPPCEHLKQLLW*ASPSKVN 165
Score = 87.2 bits (184), Expect(2) = 8e-029
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = -3 / +3
Query: 553 EQLREVDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQR 410
EQL EVDLAVQ+AVERGVGGGG+DAAPV ALEAALVVGLAFQS L R
Sbjct: 33 EQLPEVDLAVQDAVERGVGGGGQDAAPV*ALEAALVVGLAFQS*LNNR 176
Score = 72.5 bits (152), Expect(3) = 1e-045
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2 / -3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKL 424
RAPSKLSSAFSGTQDKCAACQKTVYPLEK+
Sbjct: 413 RAPSKLSSAFSGTQDKCAACQKTVYPLEKV 324
Score = 71.2 bits (149), Expect(3) = 3e-023
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +1 / -2
Query: 334 KGPQQAIICVFWYSG*VCSLPENSVPAGE 420
KGP+QAI+C+FWYSG*VCS+PENSVPAGE
Sbjct: 414 KGPKQAIVCIFWYSG*VCSMPENSVPAGE 328
Score = 68.0 bits (142), Expect(2) = 3e-041
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1 / +1
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGAL 334
FSSGYTVFW AAHLS*VPENADDSLLGAL
Sbjct: 328 FSSGYTVFWHAAHLS*VPENADDSLLGAL 414
Score = 63.8 bits (133), Expect(2) = 8e-029
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / +2
Query: 419 SPAGTLFSGKLHTYPEYQKTQMIACWGPL 333
SPAGTLFSG LHTYPEYQK Q IAC GPL
Sbjct: 329 SPAGTLFSGMLHTYPEYQKMQTIACLGPL 415
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 523 VLQDPLRAAVHGEGELQPHDE 585
VLQDPLRAAVHGEGELQPH+E
Sbjct: 63 VLQDPLRAAVHGEGELQPHEE 1
Score = 27.6 bits (54), Expect(3) = 3e-023
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 421 VDSGRRVLPQELLQV 465
V+ GRR LPQELLQV
Sbjct: 165 VNFGRRGLPQELLQV 121
Score = 22.1 bits (42), Expect(3) = 1e-045
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 314 SDKGELTRAPSK 349
SDKGEL + PS+
Sbjct: 550 SDKGELVQLPSQ 515
>gb|CW385134.1|CW385134 fsbb001f068h22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068h22, DNA
sequence
Length = 671
Score = 129 bits (276), Expect(2) = 3e-044
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / -2
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 334 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 155
Score = 112 bits (239), Expect(2) = 4e-037
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1 / +3
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 171 WMRWL*LPFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 332
Score = 82.6 bits (174), Expect(2) = 2e-021
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3 / +2
Query: 553 EQLREVDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQRV 407
EQLREVDLAV++ +ERGVGGG +DAAPVRALEAALVV LAFQ L +++
Sbjct: 203 EQLREVDLAVEDPIERGVGGGCQDAAPVRALEAALVVRLAFQRHLNKKI 349
Score = 71.2 bits (149), Expect(2) = 3e-044
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2 / -3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKL 424
+APSKLSSAFSGTQDKCAACQKTVYPLEK+
Sbjct: 543 KAPSKLSSAFSGTQDKCAACQKTVYPLEKV 454
Score = 67.0 bits (140), Expect(2) = 4e-037
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1 / +2
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGA 337
FS+GYTVFWQAAHLS*VPENADDSLLGA
Sbjct: 458 FSNGYTVFWQAAHLS*VPENADDSLLGA 541
Score = 41.4 bits (84), Expect(2) = 2e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / +3
Query: 419 SPAGTLFSGKLHTYPEYQKTQMIACWGPL 333
SP T FSG+L Y E+Q+ QMIAC PL
Sbjct: 459 SPMDTRFSGRLRIYLEFQRMQMIACSEPL 545
>gb|CW109957.1|CW109957 104_482_11103418_116_34510_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103418, DNA
sequence
Length = 508
Score = 131 bits (280), Expect(4) = 6e-043
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2 / +3
Query: 425 TLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQD 604
TLEGE++ KSCFKCSH GCILTTSSYAALNGVLYCKIHF QLFMEKGSY+HM KKS SQ+
Sbjct: 3 TLEGEAHPKSCFKCSHRGCILTTSSYAALNGVLYCKIHFRQLFMEKGSYNHMKKKSTSQE 182
Query: 605 TL 610
L
Sbjct: 183 VL 188
Score = 120 bits (256), Expect(5) = 3e-043
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = -1 / -1
Query: 600 WDGLFFIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
WD LFF MWL*LPFSMNSC KWILQY+TPLSAA*EEVVRMQP CEHLKQLL SPS+V
Sbjct: 178 WDVLFFFMWL*LPFSMNSCLKWILQYKTPLSAA*EEVVRMQPLCEHLKQLLGWASPSKV 2
Score = 95.0 bits (201), Expect(3) = 7e-027
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = -3 / -3
Query: 628 VGGHVRQRILGRXXXXXXXXXXXXHEQLREVDLAVQNAVERGVGGGGEDAAPVRALEAAL 449
+G VRQ +LGR HEQL EVDLAVQ+AVERGVGGGG+DAAPV ALEAAL
Sbjct: 206 LGSQVRQHLLGRALLLHVVVAPLLHEQLPEVDLAVQDAVERGVGGGGQDAAPV*ALEAAL 27
Query: 448 VVGLAFQS 425
VGLAFQS
Sbjct: 26 GVGLAFQS 3
Score = 72.5 bits (152), Expect(4) = 5e-024
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2 / +3
Query: 137 TADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFS 286
T +G + K+CFKCSH IL+ SY++++GVLYCK HF QLF E GS++
Sbjct: 3 TLEGEAHPKSCFKCSHRGCILTTSSYAALNGVLYCKIHFRQLFMEKGSYN 152
Score = 47.3 bits (97), Expect(5) = 3e-043
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 941 QLQFFREANTAPCQNRHCHEP 879
++ FREANTAPCQN HCHEP
Sbjct: 483 KVTIFREANTAPCQNCHCHEP 421
Score = 45.1 bits (92), Expect(4) = 6e-043
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2 / +3
Query: 866 VTSDEAHDNGDFGMELC*PRGK 931
+ + EAHDNG+FGMELC*P GK
Sbjct: 408 LVTSEAHDNGNFGMELC*PHGK 473
Score = 44.1 bits (90), Expect(4) = 5e-024
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1 / +2
Query: 877 *GS*QWRFWHGAVLASRK 930
*GS*QW+FWHGAVLASRK
Sbjct: 419 *GS*QWQFWHGAVLASRK 472
Score = 40.5 bits (82), Expect(3) = 7e-027
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 946 LHSYSFSARLTQLHAKIAIVMSLIR 872
L FS RLTQLHAKIAIVMSL R
Sbjct: 488 LTKLQFSVRLTQLHAKIAIVMSLRR 414
Score = 35.0 bits (70), Expect(4) = 6e-043
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2 / +3
Query: 767 FFFSTTLRYSLLSSISP*TRFVVQLAVSVPDAFVTSD 877
FFF+T L L S ++ V AVSVPDA VTS+
Sbjct: 312 FFFTTLLYSLLFSFLNLSVNSVCHQAVSVPDALVTSE 422
Score = 35.0 bits (70), Expect(5) = 3e-043
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 889 VMSLIRRNEGIWYTYSQLDDK 827
++ +RRNEGIWYTYS + ++
Sbjct: 434 IVMSLRRNEGIWYTYSLMTNR 372
Score = 29.5 bits (58), Expect(4) = 5e-024
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1 / +2
Query: 796 PPFIYLSVNSVCRPAGCKCTRCLRYV* 876
P F S + + CKCTRC RYV*
Sbjct: 341 PLFFSKSFCELGLSSSCKCTRCPRYV* 421
Score = 27.6 bits (54), Expect(3) = 7e-027
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 879 SSDVTKASGTLTA 841
+SDVT+ASGTLTA
Sbjct: 424 ASDVTRASGTLTA 386
Score = 25.8 bits (50), Expect(5) = 3e-043
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 841 QLDDKPSSRRD 809
QLDDKPSS++D
Sbjct: 390 QLDDKPSSQKD 358
Score = 24.9 bits (48), Expect(5) = 3e-043
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 776 RKRKEKWQTQT 744
++ KEKWQTQT
Sbjct: 329 KRGKEKWQTQT 297
Score = 24.4 bits (47), Expect(4) = 5e-024
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +2
Query: 763 SFLFLYDASLFPPFIY 810
S +FLY ASLF P +
Sbjct: 305 SAIFLYHASLFTPLFF 352
Score = 24.0 bits (46), Expect(4) = 6e-043
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 742 QVCVCHFS 765
+VCVCHFS
Sbjct: 295 EVCVCHFS 318
>gb|CW376890.1|CW376890 fsbb001f054p19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f054p19, DNA
sequence
Length = 642
Score = 110 bits (234), Expect(3) = 2e-042
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV YHKTCFKCSHCKGILS+
Sbjct: 261 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSV 395
Score = 105 bits (223), Expect(5) = 8e-036
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1 / -3
Query: 201 ERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
ERIPLQWLHLKHVLW*+TPSAVRRSMKWTVLSH+ HLSCVPVK+
Sbjct: 391 ERIPLQWLHLKHVLW*MTPSAVRRSMKWTVLSHAVHLSCVPVKD 260
Score = 81.7 bits (172), Expect(3) = 2e-042
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2 / +3
Query: 185 CKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSK 289
C G L MCSYSSMDGVLYCKTHFEQLFKETGSFSK
Sbjct: 534 CVGRLQMCSYSSMDGVLYCKTHFEQLFKETGSFSK 638
Score = 70.3 bits (147), Expect(3) = 9e-021
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 508
+F+GTQDKC AC KTV+ ++ LT +G YHK+CFKCSH IL+ + A
Sbjct: 261 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSVRVHHA 410
Score = 48.3 bits (99), Expect(3) = 9e-021
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2 / +3
Query: 485 LTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L SY++++GVLYCK HF QLF E GS+S
Sbjct: 546 LQMCSYSSMDGVLYCKTHFEQLFKETGSFS 635
Score = 37.7 bits (76), Expect(5) = 8e-036
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 567 LPFSMNSCAKWILQYRTP 514
LP S+ SC+KW+LQY TP
Sbjct: 628 LPVSLKSCSKWVLQYSTP 575
Score = 35.4 bits (71), Expect(5) = 8e-036
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -1
Query: 236 TAHRPWKSSCTS 201
TAHRPWKSSCTS
Sbjct: 585 TAHRPWKSSCTS 550
Score = 27.6 bits (54), Expect(5) = 8e-036
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 47 ACGCTHALSPPD 12
ACGCTHAL P+
Sbjct: 248 ACGCTHALVAPN 213
Score = 24.9 bits (48), Expect(3) = 2e-042
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 12 IGRRECVRAATG 47
IG ECVRAATG
Sbjct: 213 IGGDECVRAATG 248
Score = 24.4 bits (47), Expect(3) = 9e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 16 GGESACVQPQA 48
G SACVQPQA
Sbjct: 217 GATSACVQPQA 249
Score = 23.1 bits (44), Expect(5) = 8e-036
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 71 KTWCRRL 51
KTWCRRL
Sbjct: 264 KTWCRRL 244
>gb|AW287022.2|AW287022 LG1_264_E07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 511
Score = 128 bits (274), Expect(2) = 3e-041
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DGV +H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 149 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 328
Query: 254 EQLFKETGSFSKNF 295
EQLFKETGS++K+F
Sbjct: 329 EQLFKETGSYNKSF 370
Score = 109 bits (232), Expect = 9e-023
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +2 / +2
Query: 362 FSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF 541
FSGTQ KC C KTVYP+++L+ +G ++H+SCFKC H L+ S+Y++ GV YCK HF
Sbjct: 149 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 328
Query: 542 AQLFMEKGSYS 574
QLF E GSY+
Sbjct: 329 EQLFKETGSYN 361
Score = 92.7 bits (196), Expect(2) = 8e-025
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SCSKW LQY TPS EE*L ER+ LQ HLK W TPS S+ +T
Sbjct: 369 KLLL*LPVSLNSCSKWALQYGTPSNEE*LLRERVDLQCWHLKQERWKATPSVESWSIGYT 190
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 189 VLVHTLHFCCVPL 151
Score = 62.0 bits (129), Expect(2) = 3e-041
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEK 421
ELTR+PSK + FSGTQDKCA C KT YPLEK
Sbjct: 416 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEK 511
Score = 42.8 bits (87), Expect(2) = 8e-025
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -1 / -2
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 510 FSRGYAVLPQVAHLSCVPENILAALLGDLVSS 415
>gb|CW417257.1|CW417257 fsbb001f120c20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f120c20, DNA
sequence
Length = 777
Score = 129 bits (276), Expect(3) = 2e-040
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / -2
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 560 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 381
Score = 112 bits (239), Expect(2) = 1e-032
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1 / +1
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 397 WMRWL*LPFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 558
Score = 53.8 bits (111), Expect(3) = 2e-040
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2 / -2
Query: 335 RAPSKLSSAFSGTQDKCAACQK 400
+APSKLSSAFSGTQDKCAACQK
Sbjct: 770 KAPSKLSSAFSGTQDKCAACQK 705
Score = 51.9 bits (107), Expect(2) = 1e-032
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 399 FWQAAHLS*VPENADDSLLGA 337
FWQAAHLS*VPENADDSLLGA
Sbjct: 706 FWQAAHLS*VPENADDSLLGA 768
Score = 23.1 bits (44), Expect(3) = 2e-040
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / -3
Query: 395 QKTVYPLEKL 424
+KTVYPLEK+
Sbjct: 709 RKTVYPLEKV 680
>gb|BG241604.1|BG241604 RHIZ2_17_F04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 565
Score = 167 bits (360), Expect = 2e-040
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 62 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 241
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 242 ALEGILYCKHHFSQLFKEKGSYNHLIK 322
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 98 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 277
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 278 SQLFKEKGSYN 310
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 385 IVPFQQWGFEGESWEASCF 441
>gb|CF427234.1|CF427234 PH1_4_F06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_F06_A002 3', mRNA sequence
Length = 547
Score = 167 bits (360), Expect = 2e-040
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 33 ELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 212
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 213 ALEGILYCKHHFSQLFKEKGSYNHLIK 293
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 69 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 248
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 249 SQLFKEKGSYN 281
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +2
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 356 IVPFQQWGFEGESWEASCF 412
>gb|BF481871.1|BF481871 FM1_22_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 555
Score = 165 bits (354), Expect = 1e-039
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PS + FSGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YA
Sbjct: 8 ELTRSPSXAARMFSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYA 187
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 188 ALEGILYCKHHFSQLFKEKGSYNHLIK 268
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 44 FSGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHF 223
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 224 SQLFKEKGSYN 256
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 331 IVPFQQWGFEGESWEASCF 387
>gb|CW042854.1|CW042854 104_276_10507318_116_30489 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10507318, DNA
sequence
Length = 631
Score = 101 bits (215), Expect(3) = 8e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +2 / -2
Query: 419 KLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
+LTLEGE+YHKSCFKCSHGGCILTTSSYAALNGVLYCKIH
Sbjct: 120 QLTLEGEAYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 1
Score = 90.0 bits (190), Expect(2) = 9e-031
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -1 / +2
Query: 537 WILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVN 421
WILQY+TPLSAA*EEVVRMQPPCEHLKQLLW* SPS+VN
Sbjct: 2 WILQYKTPLSAA*EEVVRMQPPCEHLKQLLW*ASPSKVN 118
Score = 79.4 bits (167), Expect(2) = 2e-026
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = -3 / +1
Query: 538 VDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQR 410
VDLAVQ+AVERGVGGGG+DAAPV ALEAALVVGLAFQS L R
Sbjct: 1 VDLAVQDAVERGVGGGGQDAAPV*ALEAALVVGLAFQS*LNNR 129
Score = 72.5 bits (152), Expect(3) = 8e-037
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2 / -2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKL 424
RAPSKLSSAFSGTQDKCAACQKTVYPLEK+
Sbjct: 366 RAPSKLSSAFSGTQDKCAACQKTVYPLEKV 277
Score = 68.0 bits (142), Expect(2) = 9e-031
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1 / +2
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGAL 334
FSSGYTVFW AAHLS*VPENADDSLLGAL
Sbjct: 281 FSSGYTVFWHAAHLS*VPENADDSLLGAL 367
Score = 63.8 bits (133), Expect(2) = 2e-026
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / +3
Query: 419 SPAGTLFSGKLHTYPEYQKTQMIACWGPL 333
SPAGTLFSG LHTYPEYQK Q IAC GPL
Sbjct: 282 SPAGTLFSGMLHTYPEYQKMQTIACLGPL 368
Score = 23.5 bits (45), Expect(3) = 8e-037
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / -3
Query: 305 GKSSDKGELTRAPSK 349
G SDKGEL + PS+
Sbjct: 512 GCKSDKGELVQLPSQ 468
>gb|CW376891.1|CW376891 fsbb001f054p19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f054p19, DNA
sequence
Length = 483
Score = 110 bits (234), Expect(3) = 5e-036
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2 / -1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV YHKTCFKCSHCKGILS+
Sbjct: 348 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSV 214
Score = 105 bits (223), Expect(5) = 1e-033
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1 / +2
Query: 201 ERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
ERIPLQWLHLKHVLW*+TPSAVRRSMKWTVLSH+ HLSCVPVK+
Sbjct: 218 ERIPLQWLHLKHVLW*MTPSAVRRSMKWTVLSHAVHLSCVPVKD 349
Score = 58.8 bits (122), Expect(3) = 5e-036
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2 / -1
Query: 185 CKGILSMCSYSSMDGVLYCKTHFEQ 259
C G L MCSYSSMDGVLYCKTHFEQ
Sbjct: 75 CVGRLQMCSYSSMDGVLYCKTHFEQ 1
Score = 35.4 bits (71), Expect(5) = 1e-033
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 236 TAHRPWKSSCTS 201
TAHRPWKSSCTS
Sbjct: 24 TAHRPWKSSCTS 59
Score = 28.6 bits (56), Expect(5) = 1e-033
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 546 CAKWILQYRTP 514
C+KW+LQY TP
Sbjct: 2 CSKWVLQYSTP 34
Score = 27.6 bits (54), Expect(5) = 1e-033
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 47 ACGCTHALSPPD 12
ACGCTHAL P+
Sbjct: 361 ACGCTHALVAPN 396
Score = 24.9 bits (48), Expect(3) = 5e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 12 IGRRECVRAATG 47
IG ECVRAATG
Sbjct: 396 IGGDECVRAATG 361
Score = 23.1 bits (44), Expect(5) = 1e-033
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +3
Query: 71 KTWCRRL 51
KTWCRRL
Sbjct: 345 KTWCRRL 365
>gb|CW497105.1|CW497105 fsbb001f289k18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f289k18, DNA
sequence
Length = 711
Score = 92.7 bits (196), Expect(3) = 3e-035
Identities = 36/40 (90%), Positives = 36/40 (90%)
Frame = +2 / +3
Query: 185 CKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNFTPG 304
C G L MCSYSSMDGVLYCKTHFEQLFKETGSFSK FTPG
Sbjct: 156 CVGRLQMCSYSSMDGVLYCKTHFEQLFKETGSFSKKFTPG 275
Score = 81.7 bits (172), Expect(2) = 3e-028
Identities = 35/44 (79%), Positives = 36/44 (81%)
Frame = -1 / -3
Query: 303 PGVKFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHL 172
PGV FLEKLPVSLKSCSKWVLQYSTPSMEE*LHI P + L
Sbjct: 274 PGVNFLEKLPVSLKSCSKWVLQYSTPSMEE*LHICSRPTHYTSL 143
Score = 81.3 bits (171), Expect(2) = 4e-029
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1 / +2
Query: 202 DVQLLFHGRCAVLQDPLRAALQGDRELLQELHAR 303
DVQLLFHGRCAVLQDPLRAALQGDRELLQE+HAR
Sbjct: 173 DVQLLFHGRCAVLQDPLRAALQGDRELLQEVHAR 274
Score = 72.5 bits (152), Expect(3) = 3e-035
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2 / +2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKL 424
RAPSKLSSAFSGTQDKCAACQKTVYPLEK+
Sbjct: 521 RAPSKLSSAFSGTQDKCAACQKTVYPLEKV 610
Score = 71.2 bits (149), Expect(2) = 4e-029
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +1 / +1
Query: 334 KGPQQAIICVFWYSG*VCSLPENSVPAGE 420
KGP+QAI+C+FWYSG*VCS+PENSVPAGE
Sbjct: 520 KGPKQAIVCIFWYSG*VCSMPENSVPAGE 606
Score = 68.0 bits (142), Expect(2) = 3e-028
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1 / -1
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGAL 334
FSSGYTVFW AAHLS*VPENADDSLLGAL
Sbjct: 606 FSSGYTVFWHAAHLS*VPENADDSLLGAL 520
Score = 23.5 bits (45), Expect(3) = 3e-035
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 305 GKSSDKGELTRAPSK 349
G SDKGEL + PS+
Sbjct: 375 GCKSDKGELVQLPSQ 419
>gb|BF586546.1|BF586546 FM1_29_E09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 559
Score = 149 bits (320), Expect = 6e-035
Identities = 54/74 (72%), Positives = 65/74 (87%)
Frame = +2 / +3
Query: 365 SGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFA 544
SGTQDKCA C KT YPLEK+T+E ++YHKSCFKCSHGGC +T S+YAAL G+LYCK HF+
Sbjct: 33 SGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFS 212
Query: 545 QLFMEKGSYSHMMK 586
QLF EKGSY+H++K
Sbjct: 213 QLFKEKGSYNHLIK 254
Score = 100 bits (213), Expect(2) = 8e-022
Identities = 35/70 (50%), Positives = 52/70 (74%)
Frame = +2 / +3
Query: 77 TGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFE 256
+GTQDKCA C KT + ++ +T + YHK+CFKCSH ++ +Y++++G+LYCK HF
Sbjct: 33 SGTQDKCATCGKTAYPLEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFS 212
Query: 257 QLFKETGSFS 286
QLFKE GS++
Sbjct: 213 QLFKEKGSYN 242
Score = 24.9 bits (48), Expect(2) = 8e-022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +2
Query: 404 VYPLEKLTLEGESYHKSCF 460
+ P ++ EGES+ SCF
Sbjct: 317 IVPFQQWGFEGESWEASCF 373
>gb|CW146141.1|CW146141 104_539_11138833_116_34988_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138833, DNA
sequence
Length = 736
Score = 71.2 bits (149), Expect(3) = 2e-032
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKL 424
+APSKLSSAFSGTQDKCAACQKTVYPLEK+
Sbjct: 463 KAPSKLSSAFSGTQDKCAACQKTVYPLEKV 552
Score = 71.2 bits (149), Expect(3) = 2e-032
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2 / +1
Query: 194 ILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
+L + SYSSMDGVLYCKTHFEQLFKETG+FSK F
Sbjct: 61 LL*ISSYSSMDGVLYCKTHFEQLFKETGTFSKKF 162
Score = 67.0 bits (140), Expect(3) = 3e-025
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1 / -3
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGA 337
FS+GYTVFWQAAHLS*VPENADDSLLGA
Sbjct: 548 FSNGYTVFWQAAHLS*VPENADDSLLGA 465
Score = 58.8 bits (122), Expect(3) = 3e-025
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -1 / -3
Query: 291 FLEKLPVSLKSCSKWVLQYSTPSMEE*LHIER 196
FLEK+PVSLKSCSK VLQY TPSMEE*L I R
Sbjct: 158 FLEKVPVSLKSCSKCVLQYRTPSMEE*LLI*R 63
Score = 40.9 bits (83), Expect(3) = 2e-032
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 446 HKSCFKCSHGGCIL 487
HKSCF+CSHGGCIL
Sbjct: 695 HKSCFQCSHGGCIL 736
Score = 32.7 bits (65), Expect(3) = 3e-025
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / -2
Query: 486 RMQPPCEHLKQLL 448
RMQPPCEH KQLL
Sbjct: 735 RMQPPCEH*KQLL 697
>gb|CW146142.1|CW146142 104_539_11138833_148_34984_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138833, DNA
sequence
Length = 676
Score = 129 bits (276), Expect = 7e-029
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / -3
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 554 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 375
Score = 112 bits (239), Expect = 9e-024
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1 / +1
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 391 WMRWL*LPFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 552
>gb|CW150217.1|CW150217 104_549_11142910_116_36306_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142910, DNA
sequence
Length = 653
Score = 129 bits (276), Expect = 7e-029
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / +2
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 113 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 292
Score = 112 bits (239), Expect = 9e-024
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1 / -3
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 276 WMRWL*LPFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 115
>gb|CW150218.1|CW150218 104_549_11142910_148_36305_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142910, DNA
sequence
Length = 668
Score = 129 bits (276), Expect = 7e-029
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / -3
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 582 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 403
Score = 110 bits (234), Expect = 5e-023
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -1 / +2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 419 WMRWL*LPFSLNSCEKWILQ*RIPLSAAXEEVVRMQPPCEHLKQLLW*DSPSNV 580
>gb|CW188249.1|CW188249 104_608_11172930_116_36732_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172930, DNA
sequence
Length = 627
Score = 129 bits (276), Expect = 7e-029
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / -3
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 532 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 353
Score = 112 bits (239), Expect = 9e-024
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1 / +3
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 369 WMRWL*LPFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 530
>gb|CW188250.1|CW188250 104_608_11172930_148_36731_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172930, DNA
sequence
Length = 623
Score = 129 bits (276), Expect = 7e-029
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2 / +3
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKGSY+H+++ + ++
Sbjct: 108 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTK 287
Score = 112 bits (239), Expect = 9e-024
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1 / -2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
++ WL*LPFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 271 WMRWL*LPFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 110
>gb|CF427262.1|CF427262 PH1_4_F06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_F06_A002 5', mRNA sequence
Length = 567
Score = 125 bits (267), Expect = 1e-027
Identities = 45/74 (60%), Positives = 58/74 (78%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KT + +D L+ DGV +H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 294 FSGTQQKCKVCTKTGYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 473
Query: 254 EQLFKETGSFSKNF 295
EQLFKETGS++K+F
Sbjct: 474 EQLFKETGSYNKSF 515
Score = 105 bits (225), Expect = 8e-022
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +2 / +3
Query: 362 FSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF 541
FSGTQ KC C KT YP+++L+ +G ++H+SCFKC H L+ S+Y++ GV YCK HF
Sbjct: 294 FSGTQQKCKVCTKTGYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 473
Query: 542 AQLFMEKGSYS 574
QLF E GSY+
Sbjct: 474 EQLFKETGSYN 506
>gb|CW022450.1|CW022450 104_161_10431848_5_30007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431848, DNA
sequence
Length = 600
Score = 62.0 bits (129), Expect(4) = 7e-027
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / -3
Query: 953 VLLTQLQFFREANTAPCQNRHCHEP 879
VLLT+LQFFREANTAPCQN HCHEP
Sbjct: 400 VLLTKLQFFREANTAPCQNCHCHEP 326
Score = 61.6 bits (128), Expect(4) = 7e-025
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1 / +3
Query: 877 *GS*QWRFWHGAVLASRKNCNCVSRTAI 960
*GS*QW+FWHGAVLASRKNCN VSRT +
Sbjct: 324 *GS*QWQFWHGAVLASRKNCNFVSRTLL 407
Score = 60.6 bits (126), Expect(3) = 7e-022
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2 / +1
Query: 866 VTSDEAHDNGDFGMELC*PRGKTVTV*AELLY 961
+ + EAHDNG+FGMELC*PRGK VT+*AEL Y
Sbjct: 313 LVTSEAHDNGNFGMELC*PRGKIVTL*AELYY 408
Score = 54.2 bits (112), Expect(4) = 7e-027
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 600 WDGLFFIMWL*LPFSMNSCAKWIL 529
WD LFF MWL*LPFSMNSC KW +
Sbjct: 83 WDVLFFFMWL*LPFSMNSCPKWTI 12
Score = 52.4 bits (108), Expect(4) = 7e-025
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / +3
Query: 535 PLRAAVHGEGELQPHDEEEPVP 600
PLRAAVHGEGELQPH+EEE VP
Sbjct: 18 PLRAAVHGEGELQPHEEEEHVP 83
Score = 51.0 bits (105), Expect(3) = 7e-022
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 533 IHFAQLFMEKGSYSHMMKKSPSQDTL 610
+HF QLFMEKGSY+HM KKS SQ+ L
Sbjct: 16 VHFGQLFMEKGSYNHMKKKSTSQEVL 93
Score = 35.0 bits (70), Expect(4) = 7e-027
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 889 VMSLIRRNEGIWYTYSQLDDK 827
++ +RRNEGIWYTYS + ++
Sbjct: 339 IVMSLRRNEGIWYTYSLMTNR 277
Score = 35.0 bits (70), Expect(3) = 7e-022
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 767 FFFSTTLRYSLLSSISP*TRFVVQLAVSVPDAFVTSD 877
FFF+T L L S ++ V AVSVPDA VTS+
Sbjct: 217 FFFTTLLYSLLFSFLNLSVNSVCHQAVSVPDALVTSE 327
Score = 31.3 bits (62), Expect(4) = 7e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 763 SFLFLYDASLFPPFIY 810
S +FLYDASLFPP +
Sbjct: 210 SAIFLYDASLFPPLFF 257
Score = 29.9 bits (59), Expect(4) = 7e-027
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2 / -1
Query: 827 TEFTER*MKGGNNEAS*RKRKEKWQTQT 744
T R +K E ++RKEKWQTQT
Sbjct: 285 TNRVHRKIKKRKEEGIKKRRKEKWQTQT 202
Score = 29.0 bits (57), Expect(4) = 7e-025
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 838 AGCKCTRCLRYV* 876
+ CKCTRC RYV*
Sbjct: 288 SSCKCTRCPRYV* 326
>gb|CW390673.1|CW390673 fsbb001f076g23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f076g23, DNA
sequence
Length = 706
Score = 117 bits (251), Expect(2) = 3e-026
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +2 / +2
Query: 422 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKG 565
+TLEGESYHKSCFKCSHGGCILTTSSYAALNG+LYCKIHF+QLF EKG
Sbjct: 149 MTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKG 292
Score = 102 bits (218), Expect = 7e-021
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = -1 / -2
Query: 564 PFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRV 424
PFS+NSC KWILQ R PLSAA*EEVVRMQPPCEHLKQLLW*DSPS V
Sbjct: 291 PFSLNSCEKWILQ*RIPLSAA*EEVVRMQPPCEHLKQLLW*DSPSNV 151
Score = 22.6 bits (43), Expect(2) = 3e-026
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 398 KTVYPLEKL 424
KTVYPLEK+
Sbjct: 3 KTVYPLEKV 29
>gb|CW385133.1|CW385133 fsbb001f068h22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068h22, DNA
sequence
Length = 739
Score = 71.2 bits (149), Expect(2) = 4e-026
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2 / +2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKL 424
+APSKLSSAFSGTQDKCAACQKTVYPLEK+
Sbjct: 536 KAPSKLSSAFSGTQDKCAACQKTVYPLEKV 625
Score = 71.2 bits (149), Expect(2) = 4e-026
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2 / +2
Query: 194 ILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
+L + SYSSMDGVLYCKTHFEQLFKETG+FSK F
Sbjct: 134 LL*ISSYSSMDGVLYCKTHFEQLFKETGTFSKKF 235
Score = 67.0 bits (140), Expect(2) = 3e-021
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1 / -2
Query: 420 FSSGYTVFWQAAHLS*VPENADDSLLGA 337
FS+GYTVFWQAAHLS*VPENADDSLLGA
Sbjct: 621 FSNGYTVFWQAAHLS*VPENADDSLLGA 538
Score = 58.8 bits (122), Expect(2) = 3e-021
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -1 / -2
Query: 291 FLEKLPVSLKSCSKWVLQYSTPSMEE*LHIER 196
FLEK+PVSLKSCSK VLQY TPSMEE*L I R
Sbjct: 231 FLEKVPVSLKSCSKCVLQYRTPSMEE*LLI*R 136
>gb|CW071276.1|CW071276 104_323_10591452_116_30437 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591452, DNA
sequence
Length = 679
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV YHKTCFKCSHCKGILS+
Sbjct: 533 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSV 667
Score = 105 bits (223), Expect(3) = 1e-025
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1 / -2
Query: 201 ERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
ERIPLQWLHLKHVLW*+TPSAVRRSMKWTVLSH+ HLSCVPVK+
Sbjct: 663 ERIPLQWLHLKHVLW*MTPSAVRRSMKWTVLSHAVHLSCVPVKD 532
Score = 27.6 bits (54), Expect(3) = 1e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 47 ACGCTHALSPPD 12
ACGCTHAL P+
Sbjct: 520 ACGCTHALVAPN 485
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 12 IGRRECVRAATG 47
IG ECVRAATG
Sbjct: 485 IGGDECVRAATG 520
Score = 23.1 bits (44), Expect(3) = 1e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 71 KTWCRRL 51
KTWCRRL
Sbjct: 536 KTWCRRL 516
>gb|CW131967.1|CW131967 104_515_11115958_148_34793_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115958, DNA
sequence
Length = 613
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV YHKTCFKCSHCKGILS+
Sbjct: 392 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSV 526
Score = 105 bits (223), Expect(3) = 1e-025
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1 / -2
Query: 201 ERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
ERIPLQWLHLKHVLW*+TPSAVRRSMKWTVLSH+ HLSCVPVK+
Sbjct: 522 ERIPLQWLHLKHVLW*MTPSAVRRSMKWTVLSHAVHLSCVPVKD 391
Score = 27.6 bits (54), Expect(3) = 1e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 47 ACGCTHALSPPD 12
ACGCTHAL P+
Sbjct: 379 ACGCTHALVAPN 344
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 12 IGRRECVRAATG 47
IG ECVRAATG
Sbjct: 344 IGGDECVRAATG 379
Score = 23.1 bits (44), Expect(3) = 1e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 71 KTWCRRL 51
KTWCRRL
Sbjct: 395 KTWCRRL 375
>gb|CW042853.1|CW042853 104_276_10507318_114_30483 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10507318, DNA
sequence
Length = 576
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV YHKTCFKCSHCKGILS+
Sbjct: 351 SFTGTQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSV 485
Score = 105 bits (223), Expect(3) = 1e-025
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1 / -3
Query: 201 ERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
ERIPLQWLHLKHVLW*+TPSAVRRSMKWTVLSH+ HLSCVPVK+
Sbjct: 481 ERIPLQWLHLKHVLW*MTPSAVRRSMKWTVLSHAVHLSCVPVKD 350
Score = 27.6 bits (54), Expect(3) = 1e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 47 ACGCTHALSPPD 12
ACGCTHAL P+
Sbjct: 338 ACGCTHALVAPN 303
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 12 IGRRECVRAATG 47
IG ECVRAATG
Sbjct: 303 IGGDECVRAATG 338
Score = 23.1 bits (44), Expect(3) = 1e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 71 KTWCRRL 51
KTWCRRL
Sbjct: 354 KTWCRRL 334
>gb|CW472155.1|CW472155 fsbb001f226o15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f226o15, DNA
sequence
Length = 702
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +2 / -3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSM 205
SFTGTQDKC CDKTVHFIDLLTADGV+YHKTCFKCSHCKG LS+
Sbjct: 295 SFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSV 161
Score = 23.5 bits (45), Expect(2) = 1e-023
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -1
Query: 190 RDPLDVQLLFH 222
R PLD QLLFH
Sbjct: 33 RSPLD*QLLFH 1
>gb|CW094129.1|CW094129 104_457_11000145_116_37477_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11000145, DNA
sequence
Length = 690
Score = 73.5 bits (154), Expect(2) = 4e-023
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2 / -1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCS 211
F+GTQ KC C KTV+ +D L+ DGV +H++CFKC HCK LS+ S
Sbjct: 597 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSVRS 460
Score = 58.8 bits (122), Expect(2) = 4e-023
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +2 / -1
Query: 203 MCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
+ +YSS +GV YCK HFEQLFKETGS++K+F
Sbjct: 123 LSNYSSFEGVPYCKAHFEQLFKETGSYNKSF 31
>gb|CW147347.1|CW147347 104_540_11139465_116_34996_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139465, DNA
sequence
Length = 703
Score = 78.5 bits (165), Expect(2) = 4e-023
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCS 211
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +
Sbjct: 52 GPAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKVAT 210
Score = 53.8 bits (111), Expect(2) = 4e-023
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 203 MCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
+ +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 345 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 437
>gb|CW391703.1|CW391703 fsbb001f077p12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077p12, DNA
sequence
Length = 760
Score = 78.5 bits (165), Expect(2) = 4e-023
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCS 211
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +
Sbjct: 208 GPAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKVAT 366
Score = 53.8 bits (111), Expect(2) = 4e-023
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 203 MCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
+ +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 501 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 593
>gb|CW021762.1|CW021762 104_160_10431448_1_30004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431448, DNA
sequence
Length = 658
Score = 109 bits (232), Expect = 9e-023
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2 / -1
Query: 419 KLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMK 586
++T+E ++YHKSCFKCSHGGC +T S+YAAL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 391 QVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK 224
>gb|CW454038.1|CW454038 fsbb001f198e20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198e20, DNA
sequence
Length = 755
Score = 109 bits (232), Expect = 9e-023
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2 / -2
Query: 419 KLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMK 586
++T+E ++YHKSCFKCSHGGC +T S+YAAL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 706 QVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK 539
>gb|BF586623.1|BF586623 FM1_29_E09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 408
Score = 105 bits (223), Expect = 2e-021
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DGV +H++CFKC HCK LS+ +YSS +GV YCK HF
Sbjct: 222 FSGTQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHF 401
Query: 254 EQ 259
EQ
Sbjct: 402 EQ 407
>gb|CW089052.1|CW089052 104_434_10948479_114_32601_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948479, DNA
sequence
Length = 700
Score = 104 bits (222), Expect = 2e-021
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2 / -2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKG 193
SFTGTQDKC CDKTVHFIDLLTADGV+YHKTCFKCSHCKG
Sbjct: 126 SFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKG 4
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,097,161,963
Number of Sequences: 832831
Number of extensions: 14874694
Number of successful extensions: 120510
Number of sequences better than 1.0e-020: 50
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 32444734025
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)