TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696657.2.1
(1531 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 500 e-140
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 461 e-128
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 457 e-127
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 457 e-127
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 407 e-118
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 379 e-104
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 237 2e-089
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 254 5e-089
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 279 7e-087
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 279 1e-084
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 269 2e-083
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 307 3e-082
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 303 6e-081
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 233 2e-080
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 275 6e-079
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 226 4e-078
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 142 7e-077
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 153 2e-075
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 131 8e-075
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 206 1e-074
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 274 3e-072
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 152 4e-072
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 172 6e-072
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 125 5e-071
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 233 6e-071
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 125 3e-070
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 226 1e-068
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 160 3e-068
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 148 4e-068
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 117 8e-068
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 164 3e-067
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 157 3e-067
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 125 6e-067
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 211 7e-067
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 206 3e-066
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 152 7e-066
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 116 2e-065
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 224 2e-065
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 105 2e-064
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 166 3e-064
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 117 3e-064
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 117 3e-064
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 117 4e-064
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 146 4e-064
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 146 4e-064
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 145 1e-063
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 213 1e-063
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 105 3e-063
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 96 4e-063
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 105 1e-062
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 225 2e-062
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 117 4e-062
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 94 4e-061
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 117 7e-061
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 93 9e-061
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 117 2e-060
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 120 1e-058
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 136 2e-058
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 125 8e-058
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 206 2e-056
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 118 5e-056
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 117 1e-055
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 117 6e-055
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 131 2e-051
gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation... 93 7e-051
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 202 1e-050
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 202 1e-050
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 202 1e-050
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 202 1e-050
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 117 3e-050
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 90 2e-049
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 115 2e-049
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 117 3e-049
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 121 1e-047
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 117 2e-047
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 121 7e-047
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 120 4e-046
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 187 5e-046
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 183 5e-045
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 91 7e-045
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 181 2e-044
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 121 4e-044
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 121 4e-044
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 177 3e-043
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 137 9e-043
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 97 3e-040
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 117 4e-040
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 117 4e-040
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 117 4e-040
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 102 2e-039
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 105 2e-039
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 117 1e-038
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 102 3e-038
gb|BE597262.1|BE597262 PI1_70_B02.g1_A002 Pathogen induced ... 87 8e-038
gb|CW401940.1|CW401940 fsbb001f093a03f0 Sorghum methylation... 79 4e-037
gb|CD213604.1|CD213604 HS1_52_B12.b1_A012 Heat-shocked seed... 85 4e-037
gb|CD462003.1|CD462003 SA1_36_H06.b1_A002 Salicylic acid-tr... 85 4e-037
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 155 1e-036
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 125 1e-036
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 129 2e-036
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 102 4e-036
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 125 5e-036
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 121 4e-035
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 112 1e-034
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 121 1e-034
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 121 1e-034
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 111 2e-034
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 111 2e-034
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 117 2e-034
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 121 4e-034
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 121 4e-034
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 121 4e-034
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 119 5e-034
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 118 1e-033
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 145 2e-033
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 145 2e-033
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 121 5e-033
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 111 6e-033
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 67 1e-032
gb|CL175908.1|CL175908 104_381_10892772_148_31764_372 Sorgh... 77 1e-031
gb|CW191731.1|CW191731 104_613_11178652_148_36941_002 Sorgh... 77 1e-031
gb|BI098131.1|BI098131 IP1_32_D12.g1_A002 Immature pannicle... 67 1e-031
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 139 1e-031
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 112 1e-031
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 138 2e-031
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 118 2e-031
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 121 2e-031
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 116 5e-031
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 121 1e-030
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 71 2e-030
gb|CL165003.1|CL165003 104_359_10808294_116_31817_278 Sorgh... 111 4e-030
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 121 9e-030
gb|CW070897.1|CW070897 104_323_10591301_114_30471 Sorghum m... 73 2e-029
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 121 2e-029
gb|CD212571.1|CD212571 HS1_6_F12.b1_A012 Heat-shocked seedl... 66 2e-028
gb|CW323365.1|CW323365 104_817_11476592_116_35962_024 Sorgh... 102 4e-028
gb|CW217189.1|CW217189 104_650_11195523_148_37130_010 Sorgh... 102 6e-028
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 125 2e-027
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 87 4e-027
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 124 4e-027
gb|CW030834.1|CW030834 104_259_10500452_116_30398 Sorghum m... 84 6e-027
gb|BG357591.1|BG357591 OV2_31_G11.g1_A002 Ovary 2 (OV2) Sor... 121 3e-026
gb|CF430289.1|CF430289 PH1_27_G01.b1_A002 Phosphorous-defic... 58 3e-026
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 121 4e-026
gb|CX609536.1|CX609536 ANR1_13_F11.b1_A002 Anaerobic roots ... 88 6e-026
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 108 1e-025
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 115 2e-025
gb|CW232350.1|CW232350 104_685_11212772_116_37364_080 Sorgh... 66 4e-025
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 115 2e-024
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 56 3e-024
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 110 8e-023
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 110 8e-023
gb|CW194907.1|CW194907 104_618_11180352_116_36796_092 Sorgh... 71 1e-022
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 98 2e-022
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 103 6e-022
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 104 3e-021
>gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 712
Score = 500 bits (1087), Expect = e-140
Identities = 202/236 (85%), Positives = 225/236 (95%)
Frame = -2 / -3
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
V N TV+GIKLLNSKFFHINID S++ITVKDVN+TAP DVENTDGVHVG S+K+SI NST
Sbjct: 710 VTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNST 531
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
IGTGDDC+S+GPG +GV+V++I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVLK TTNG
Sbjct: 530 IGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNG 351
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSVKDVT 457
VRIKSY DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+KVCPGK+S+SSHV VKDVT
Sbjct: 350 VRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVT 171
Query: 456 FRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKG 289
FRNITGTSSTP+AISLLCS++QPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKG
Sbjct: 170 FRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKG 3
Score = 438 bits (951), Expect = e-122
Identities = 195/237 (82%), Positives = 203/237 (85%)
Frame = +2 / +1
Query: 287 LPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
LPLAVPLALL TAMVLLFLPAYST TSM +TPLHGC EQSRLMA GVDDVPVMLRNVTS
Sbjct: 1 LPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTS 180
Query: 467 LTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLV 646
LT T EE L LPGHTF GQKYWSM MG ATSSILMFSKVR +AVSTDSAS+YDLMRTPLV
Sbjct: 181 LTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLV 360
Query: 647 VFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVEL 826
VFLSTQ RTV S+TSFSSL*RPRQP LMPCPGPQ+ML T TP PGP E QSSPVPMVEL
Sbjct: 361 VFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVEL 540
Query: 827 RMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT 997
ML L + PTWTPSVFSTS GAV FTSFTVM E S+LMWKNLELSSLIP TV L+T
Sbjct: 541 VMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPETVPLVT 711
Score = 231 bits (498), Expect(3) = 2e-075
Identities = 97/139 (69%), Positives = 105/139 (75%)
Frame = -1 / -2
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 477 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 298
Query: 583 HLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQGXXXXXXXXXXXXXRGHQPAL 404
LREHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG GHQPAL
Sbjct: 297 DLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGRHVPQHHGHVVHATGHQPAL 118
Query: 403 LGDAAMQRRLPHRCQRGVR 347
L AMQRR+ HRC+RGVR
Sbjct: 117 LAVTAMQRRVAHRCKRGVR 61
Score = 210 bits (454), Expect(3) = 1e-071
Identities = 97/129 (75%), Positives = 101/129 (78%)
Frame = +1 / +3
Query: 289 SLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVAERDVL 468
+LGGALGVAA GHG VVLAGVLHV IDE AAAWL LRAEQ VAERDVL
Sbjct: 3 ALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVAERDVL 182
Query: 469 DGDMRGVAPLARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGG 648
D DMRGVA LA A+LL AEVLVDDDGV HLLHPDVLEG+M RQH LGV VRLDAHAV G
Sbjct: 183 DDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDAHAVSG 362
Query: 649 VLEHAVPHR 675
+LEHAVPHR
Sbjct: 363 LLEHAVPHR 389
Score = 75.3 bits (158), Expect(3) = 1e-071
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / +3
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 474 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 608
Score = 57.9 bits (120), Expect(3) = 2e-075
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3 / -1
Query: 356 WSTPARTTKPWPSAATPRAPPR 291
WSTPARTT+PWP AATPRAPPR
Sbjct: 70 WSTPARTTRPWPCAATPRAPPR 5
Score = 40.9 bits (83), Expect(3) = 2e-075
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 997 RDQRHCRRNQTTQLQVLP 944
RDQRHC NQTTQLQVLP
Sbjct: 711 RDQRHCLWNQTTQLQVLP 658
Score = 25.8 bits (50), Expect(3) = 1e-071
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 954 WS*VV*FRRQWR*SR 998
WS*VV*F+RQ R SR
Sbjct: 668 WS*VV*FQRQCRWSR 712
>gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 660
Score = 461 bits (1000), Expect = e-128
Identities = 185/220 (84%), Positives = 209/220 (95%)
Frame = -2 / +1
Query: 984 TVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
TV+GIKLLNSKFFHINID S++ITVKDVN+TAP DVENTDGVHVG S+K+SI NSTIGTG
Sbjct: 1 TVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTIGTG 180
Query: 804 DDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIK 625
DDC+S+GPG +GV+V++I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVLK TTNGVRIK
Sbjct: 181 DDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIK 360
Query: 624 SYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSVKDVTFRNI 445
SY DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+KVCPGK+S+SSHV VKDVTFRNI
Sbjct: 361 SYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTFRNI 540
Query: 444 TGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTM 325
TGTSSTP+AISLLCS++QPCSGVSLIDVNVEYAGK +TM
Sbjct: 541 TGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKKQQTM 660
Score = 402 bits (871), Expect = e-110
Identities = 178/219 (81%), Positives = 185/219 (84%)
Frame = +2 / -2
Query: 326 MVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTETCEELLRLPG 505
MV FLPAYST TSM +TPLHGC EQSRLMA GVDDVPVMLRNVTSLT T EE L LPG
Sbjct: 659 MVCCFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSLTMT*EESLFLPG 480
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
HTF GQKYWSM MG ATSSILMFSKVR +AVSTDSAS+YDLMRTPLVVFLSTQ RTV S+
Sbjct: 479 HTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSV 300
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TSFSSL*RPRQP LMPCPGPQ+ML T TP PGP E QSSPVPMVEL ML L + PTWTP
Sbjct: 299 TSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTP 120
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPAT 982
SVFSTS GAV FTSFTVM E S+LMWKNLELSSLIP T
Sbjct: 119 SVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPET 3
Score = 231 bits (498), Expect(3) = 3e-061
Identities = 97/139 (69%), Positives = 105/139 (75%)
Frame = -1 / +3
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 222 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 401
Query: 583 HLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQGXXXXXXXXXXXXXRGHQPAL 404
LREHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG GHQPAL
Sbjct: 402 DLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGRHVPQHHGHVVHATGHQPAL 581
Query: 403 LGDAAMQRRLPHRCQRGVR 347
L AMQRR+ HRC+RGVR
Sbjct: 582 LAVTAMQRRVAHRCKRGVR 638
Score = 185 bits (398), Expect(3) = 6e-063
Identities = 85/117 (72%), Positives = 89/117 (76%)
Frame = +1 / -1
Query: 325 HGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVAERDVLDGDMRGVAPLAR 504
HG + LAGVLHV IDE AAAWL LRAEQ VAERDVLD DMRGVA LA
Sbjct: 660 HGLLFLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVAERDVLDDDMRGVALLAG 481
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPHR 675
A+LL AEVLVDDDGV HLLHPDVLEG+M RQH LGV VRLDAHAV G+LEHAVPHR
Sbjct: 480 AHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDAHAVSGLLEHAVPHR 310
Score = 75.3 bits (158), Expect(3) = 6e-063
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / -1
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 225 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 91
Score = 27.6 bits (54), Expect(3) = 3e-061
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 982 CRRNQTTQLQVLP 944
C NQTTQLQVLP
Sbjct: 3 CLWNQTTQLQVLP 41
Score = 23.5 bits (45), Expect(3) = 3e-061
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +2
Query: 356 WSTPARTTKP 327
WSTPAR +P
Sbjct: 629 WSTPARNNRP 658
Score = 22.1 bits (42), Expect(3) = 6e-063
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 954 WS*VV*FRRQ 983
WS*VV*F+RQ
Sbjct: 31 WS*VV*FQRQ 2
>gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 711
Score = 457 bits (992), Expect = e-127
Identities = 183/212 (86%), Positives = 204/212 (96%)
Frame = -2 / -2
Query: 906 DVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGI 727
DVN+TAP DVENTDGVHVG S+K+SI NSTIGTGDDC+S+GPG +GV+V++I CGPGQGI
Sbjct: 710 DVNITAPGDVENTDGVHVGMSTKVSITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGI 531
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVAN 547
S+GCLGRYKDEKDV+D+TVR+CVLK TTNGVRIKSY DAESVLTASHLTFENIRMEEVAN
Sbjct: 530 SIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 351
Query: 546 PIVIDQYFCPQKVCPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLI 367
PI+IDQYFCP+KVCPGK+S+SSHV VKDVTFRNITGTSSTP+AISLLCS++QPCSGVSLI
Sbjct: 350 PIIIDQYFCPEKVCPGKKSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLI 171
Query: 366 DVNVEYAGKNNKTMAVCSNAKGTAKGSIEALA 271
DVNVEYAGKNNKTMAVCSNAKGTAKGS+EALA
Sbjct: 170 DVNVEYAGKNNKTMAVCSNAKGTAKGSVEALA 75
Score = 391 bits (848), Expect = e-107
Identities = 175/212 (82%), Positives = 181/212 (85%)
Frame = +2 / +1
Query: 272 ASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVML 451
A AS LPLAVPLALL TAMVLLFLPAYST TSM +TPLHGC EQSRLMA GVDDVPVML
Sbjct: 76 ARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVML 255
Query: 452 RNVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLM 631
RNVTSLT T EE L LPGHTF GQKYWSM MG ATSSILMFSKVR +AVSTDSAS+YDLM
Sbjct: 256 RNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLM 435
Query: 632 RTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPV 811
RTPLVVFLSTQ RTV S+TSFSSL*RPRQP LMPCPGPQ+ML T TP PGP E QSSPV
Sbjct: 436 RTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPV 615
Query: 812 PMVELRMLILEEPPTWTPSVFSTSAGAVTFTS 907
PMVEL ML L + PTWTPSVFSTS GAV FTS
Sbjct: 616 PMVELVMLTLVDIPTWTPSVFSTSPGAVMFTS 711
Score = 231 bits (498), Expect(2) = 3e-073
Identities = 97/139 (69%), Positives = 105/139 (75%)
Frame = -1 / -1
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 567 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 388
Query: 583 HLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQGXXXXXXXXXXXXXRGHQPAL 404
LREHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG GHQPAL
Sbjct: 387 DLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGRHVPQHHGHVVHATGHQPAL 208
Query: 403 LGDAAMQRRLPHRCQRGVR 347
L AMQRR+ HRC+RGVR
Sbjct: 207 LAVTAMQRRVAHRCKRGVR 151
Score = 218 bits (470), Expect(2) = 8e-072
Identities = 101/134 (75%), Positives = 105/134 (78%)
Frame = +1 / +3
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
Q LDA+LGGALGVAA GHG VVLAGVLHV IDE AAAWL LRAEQ VA
Sbjct: 78 QGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVA 257
Query: 454 ERDVLDGDMRGVAPLARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDA 633
ERDVLD DMRGVA LA A+LL AEVLVDDDGV HLLHPDVLEG+M RQH LGV VRLDA
Sbjct: 258 ERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDA 437
Query: 634 HAVGGVLEHAVPHR 675
HAV G+LEHAVPHR
Sbjct: 438 HAVSGLLEHAVPHR 479
Score = 75.3 bits (158), Expect(2) = 8e-072
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / +3
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 564 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 698
Score = 67.5 bits (141), Expect(2) = 3e-073
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -3 / -3
Query: 356 WSTPARTTKPWPSAATPRAPPREASRHW 273
WSTPARTT+PWP AATPRAPPR ASR W
Sbjct: 160 WSTPARTTRPWPCAATPRAPPRAASRPW 77
>gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227944, DNA
sequence
Length = 663
Score = 457 bits (992), Expect = e-127
Identities = 184/219 (84%), Positives = 208/219 (94%)
Frame = -2 / +3
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVLF+V N TV+GIKLLNSKFFHINID S++ITVKDVN+TAP DVENTDGVHVG S+K+
Sbjct: 6 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 185
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
SI NSTIGTGDDC+S+GPG +GV+V++I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVL
Sbjct: 186 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 365
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHV 475
K TTNGVRIKSY DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+KVCPGK+S+SSHV
Sbjct: 366 KKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHV 545
Query: 474 SVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVN 358
VKDVTFRNITGTSSTP+AISLLCS++QPCSGVSLIDVN
Sbjct: 546 IVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVN 662
Score = 398 bits (863), Expect = e-109
Identities = 177/218 (81%), Positives = 186/218 (85%)
Frame = +2 / -3
Query: 362 TSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTETCEELLRLPGHTFCGQKYWSMT 541
TSM +TPLHGC EQSRLMA GVDDVPVMLRNVTSLT T EE L LPGHTF GQKYWSM
Sbjct: 658 TSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMM 479
Query: 542 MGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQP 721
MG ATSSILMFSKVR +AVSTDSAS+YDLMRTPLVVFLSTQ RTV S+TSFSSL*RPRQP
Sbjct: 478 MGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQP 299
Query: 722 TLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTF 901
LMPCPGPQ+ML T TP PGP E QSSPVPMVEL ML L + PTWTPSVFSTS GAV F
Sbjct: 298 MLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMF 119
Query: 902 TSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSV 1015
TSFTVM E S+LMWKNLELSSLIP TV L+T*NST+V
Sbjct: 118 TSFTVMFFEASILMWKNLELSSLIPETVPLVT*NSTNV 5
Score = 221 bits (478), Expect(2) = 3e-063
Identities = 93/135 (68%), Positives = 101/135 (74%)
Frame = -1 / +2
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 257 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 436
Query: 583 HLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQGXXXXXXXXXXXXXRGHQPAL 404
LREHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG GHQPAL
Sbjct: 437 DLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGRHVPQHHGHVVHATGHQPAL 616
Query: 403 LGDAAMQRRLPHRCQ 359
L AMQRR+ HRC+
Sbjct: 617 LAVTAMQRRVAHRCK 661
Score = 165 bits (354), Expect(3) = 1e-060
Identities = 77/106 (72%), Positives = 80/106 (75%)
Frame = +1 / -2
Query: 358 VDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVAERDVLDGDMRGVAPLARAYLLRAEVLVD 537
V IDE AAAWL LRAEQ VAERDVLD DMRGVA LA A+LL AEVLVD
Sbjct: 662 VYIDERHAAAWL*LRAEQADGLWRGRRARDVAERDVLDDDMRGVALLAGAHLLGAEVLVD 483
Query: 538 DDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPHR 675
DDGV HLLHPDVLEG+M RQH LGV VRLDAHAV G+LEHAVPHR
Sbjct: 482 DDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDAHAVSGLLEHAVPHR 345
Score = 75.3 bits (158), Expect(3) = 1e-060
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / -2
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 260 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 126
Score = 46.4 bits (95), Expect(2) = 3e-063
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / +2
Query: 1009 GAVSRDQRHCRRNQTTQLQVLP 944
GAV RDQRHC NQTTQLQVLP
Sbjct: 11 GAVLRDQRHCLWNQTTQLQVLP 76
Score = 34.5 bits (69), Expect(3) = 1e-060
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / -2
Query: 964 *FDSGDSGVDHVKQHQCV 1017
*FDS DS V HV+QHQC+
Sbjct: 56 *FDSRDSAVGHVEQHQCL 3
>gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 752
Score = 407 bits (884), Expect(2) = e-118
Identities = 164/196 (83%), Positives = 185/196 (94%)
Frame = -2 / +2
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVLF+V N TV+GIKLLNSKFFHINID S++ITVKDVN+TAP DVENTDGVHVG S+K+
Sbjct: 107 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 286
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
SI NSTIGTGDDC+S+GPG +GV+V++I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVL
Sbjct: 287 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 466
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHV 475
K TTNGVRIKSY DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+KVCPGK+S+SSHV
Sbjct: 467 KKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHV 646
Query: 474 SVKDVTFRNITGTSST 427
VKDVTFRNITGTSST
Sbjct: 647 IVKDVTFRNITGTSST 694
Score = 358 bits (776), Expect(2) = e-102
Identities = 160/196 (81%), Positives = 168/196 (85%)
Frame = +2 / -3
Query: 428 VDDVPVMLRNVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTD 607
VDDVPVMLRNVTSLT T EE L LPGHTF GQKYWSM MG ATSSILMFSKVR +AVSTD
Sbjct: 693 VDDVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTD 514
Query: 608 SASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGP 787
SAS+YDLMRTPLVVFLSTQ RTV S+TSFSSL*RPRQP LMPCPGPQ+ML T TP PGP
Sbjct: 513 SASSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGP 334
Query: 788 IETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSS 967
E QSSPVPMVEL ML L + PTWTPSVFSTS GAV FTSFTVM E S+LMWKNLELSS
Sbjct: 333 TEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFEASILMWKNLELSS 154
Query: 968 LIPATVALIT*NSTSV 1015
LIP TV L+T*NST+V
Sbjct: 153 LIPETVPLVT*NSTNV 106
Score = 190 bits (409), Expect(3) = 1e-057
Identities = 78/100 (78%), Positives = 84/100 (84%)
Frame = -1 / +1
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 358 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 537
Query: 583 HLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQG 464
LREHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG
Sbjct: 538 DLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQG 657
Score = 143 bits (306), Expect(4) = 3e-057
Identities = 63/76 (82%), Positives = 66/76 (86%)
Frame = +1 / -2
Query: 448 VAERDVLDGDMRGVAPLARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRL 627
VAERDVLD DMRGVA LA A+LL AEVLVDDDGV HLLHPDVLEG+M RQH LGV VRL
Sbjct: 673 VAERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRL 494
Query: 628 DAHAVGGVLEHAVPHR 675
DAHAV G+LEHAVPHR
Sbjct: 493 DAHAVSGLLEHAVPHR 446
Score = 75.3 bits (158), Expect(4) = 3e-057
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / -2
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 361 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 227
Score = 46.4 bits (95), Expect(3) = 1e-057
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 1009 GAVSRDQRHCRRNQTTQLQVLP 944
GAV RDQRHC NQTTQLQVLP
Sbjct: 112 GAVLRDQRHCLWNQTTQLQVLP 177
Score = 40.0 bits (81), Expect(2) = e-118
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = -2 / +1
Query: 423 EAISLLCSETQPCSGVSL 370
+AISLLCS++QPCSGVSL
Sbjct: 697 QAISLLCSQSQPCSGVSL 750
Score = 36.3 bits (73), Expect(2) = e-102
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2 / -1
Query: 368 MRETPLHGCVSEQSRLMA 421
M +TPLHGC EQSRLMA
Sbjct: 752 MSDTPLHGCDCEQSRLMA 699
Score = 34.5 bits (69), Expect(4) = 3e-057
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / -2
Query: 964 *FDSGDSGVDHVKQHQCV 1017
*FDS DS V HV+QHQC+
Sbjct: 157 *FDSRDSAVGHVEQHQCL 104
Score = 33.6 bits (67), Expect(3) = 1e-057
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 421 GHQPALLGDAAMQRRLPH 368
GHQPALL AMQRR+ H
Sbjct: 699 GHQPALLAVTAMQRRVAH 752
Score = 28.6 bits (56), Expect(4) = 3e-057
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 384 CMAASPSRAG*WP 422
CMA + SRAG*WP
Sbjct: 736 CMAVTASRAG*WP 698
>gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100a22, DNA
sequence
Length = 532
Score = 379 bits (821), Expect = e-104
Identities = 152/175 (86%), Positives = 169/175 (96%)
Frame = -2 / -2
Query: 795 VSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYV 616
+S+GPG +GV+V +I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVLK TTNGVRIKSY
Sbjct: 531 ISVGPGSDGVMVTNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYE 352
Query: 615 DAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSVKDVTFRNITGT 436
DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+KVCPGK+S+SSHV VKDVTFRNITGT
Sbjct: 351 DAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTFRNITGT 172
Query: 435 SSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSIEALA 271
SSTP+AISLLCS++QPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS+EALA
Sbjct: 171 SSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSVEALA 7
Score = 325 bits (705), Expect = 8e-088
Identities = 145/174 (83%), Positives = 150/174 (86%)
Frame = +2 / +2
Query: 272 ASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVML 451
A AS LPLAVPLALL TAMVLLFLPAYST TSM +TPLHGC EQSRLMA GVDDVPVML
Sbjct: 8 ARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVML 187
Query: 452 RNVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLM 631
RNVTSLT T EE L LPGHTF GQKYWSM MG ATSSILMFSKVR +AVSTDSAS+YDLM
Sbjct: 188 RNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLM 367
Query: 632 RTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIE 793
RTPLVVFLSTQ RTV S+TSFSSL*RPRQP LMPCPGPQ+ML T TP PGP E
Sbjct: 368 RTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLVTMTPSLPGPTE 529
Score = 231 bits (499), Expect(2) = 2e-073
Identities = 97/139 (69%), Positives = 105/139 (75%)
Frame = -1 / -1
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 499 GDQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 320
Query: 583 HLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQGXXXXXXXXXXXXXRGHQPAL 404
LREHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG GHQPAL
Sbjct: 319 DLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGRHVPQHHGHVVHATGHQPAL 140
Query: 403 LGDAAMQRRLPHRCQRGVR 347
L AMQRR+ HRC+RGVR
Sbjct: 139 LAVTAMQRRVAHRCKRGVR 83
Score = 218 bits (470), Expect(2) = 1e-057
Identities = 101/134 (75%), Positives = 105/134 (78%)
Frame = +1 / +1
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
Q LDA+LGGALGVAA GHG VVLAGVLHV IDE AAAWL LRAEQ VA
Sbjct: 10 QGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVA 189
Query: 454 ERDVLDGDMRGVAPLARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDA 633
ERDVLD DMRGVA LA A+LL AEVLVDDDGV HLLHPDVLEG+M RQH LGV VRLDA
Sbjct: 190 ERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDA 369
Query: 634 HAVGGVLEHAVPHR 675
HAV G+LEHAVPHR
Sbjct: 370 HAVSGLLEHAVPHR 411
Score = 67.5 bits (141), Expect(2) = 2e-073
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -3 / -3
Query: 356 WSTPARTTKPWPSAATPRAPPREASRHW 273
WSTPARTT+PWP AATPRAPPR ASR W
Sbjct: 92 WSTPARTTRPWPCAATPRAPPRAASRPW 9
Score = 28.1 bits (55), Expect(2) = 1e-057
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 760 HQDAVAPGPNRD 795
H DAVAPG NRD
Sbjct: 496 HHDAVAPGANRD 531
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 237 bits (512), Expect(2) = 2e-089
Identities = 89/150 (59%), Positives = 117/150 (78%)
Frame = -2 / +1
Query: 954 KFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGC 775
KFFH+N+ + + +KDV VTAP D NTDG+H+G SS ++I N+ IG GDDC+SIGPG
Sbjct: 1 KFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGT 180
Query: 774 NGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLT 595
V + +TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA SVLT
Sbjct: 181 TKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLT 360
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS + +ENI+ME+ +NPI+ID +CP K+C
Sbjct: 361 ASKIHYENIKMEDSSNPIIIDMKYCPNKIC 450
Score = 164 bits (352), Expect(2) = 6e-058
Identities = 79/145 (54%), Positives = 92/145 (63%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 437 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 258
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL RPR P LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV
Sbjct: 257 SLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLG 78
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKN 952
S GAVT TS M + MWKN
Sbjct: 77 LSPGAVTVTSLINMSLHWNTFMWKN 3
Score = 114 bits (244), Expect(2) = 2e-089
Identities = 44/66 (66%), Positives = 59/66 (89%)
Frame = -2 / +1
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 457 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 636
Query: 312 NAKGTA 295
NAKG+A
Sbjct: 637 NAKGSA 654
Score = 93.2 bits (197), Expect(2) = 4e-022
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = -1 / +3
Query: 757 QHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHL 578
+ H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L
Sbjct: 198 RRHMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 377
Query: 577 REHQDGGGGQPHRHRPVLLP 518
EHQDGG +PH HR +LP
Sbjct: 378 *EHQDGGLVEPHYHRHEVLP 437
Score = 83.1 bits (175), Expect(2) = 6e-058
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +2 / -1
Query: 293 LAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLT 472
+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL ASG+ +VPV TSLT
Sbjct: 656 VALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTFLKETSLT 477
Query: 473 ETCE 484
T E
Sbjct: 476 VTLE 465
Score = 62.0 bits (129), Expect(3) = 8e-028
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = +1 / -3
Query: 295 GGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVAERDVLDG 474
G ALGV A GHG VV A V +D+ GDA+A + AEQ V E DVLDG
Sbjct: 654 GAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVLEGDVLDG 475
Query: 475 DMRGVA 492
D+ G A
Sbjct: 474 DLGGAA 457
Score = 59.3 bits (123), Expect(3) = 8e-028
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 450 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 283
Score = 42.8 bits (87), Expect(3) = 8e-028
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +1 / -3
Query: 778 PGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGR 891
PG + DAVVA AD V D D G + VDAVRV V GR
Sbjct: 177 PGADGDAVVADADDGVLDGDPGRVAHVDAVRVGAVPGR 64
Score = 37.3 bits (75), Expect(2) = 4e-022
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3 / +2
Query: 353 STPARTTKPWPSAATPRAPP 294
+T A+TT+PWP A TPRA P
Sbjct: 596 NTVAKTTRPWPYAKTPRAAP 655
>gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a15, DNA
sequence
Length = 688
Score = 254 bits (550), Expect(3) = 5e-089
Identities = 100/126 (79%), Positives = 117/126 (92%)
Frame = -2 / -2
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVLF+V N TV+GIKLLNSKFFHINID S++ITVKDVN+TAP DVENTDGVHVG S+K+
Sbjct: 378 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 199
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
SI NSTIGTGDDC+S+GPG +GV+V++I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVL
Sbjct: 198 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 19
Query: 654 KNTTNG 637
K TTNG
Sbjct: 18 KKTTNG 1
Score = 225 bits (485), Expect(3) = 6e-084
Identities = 100/126 (79%), Positives = 106/126 (84%)
Frame = +2 / +2
Query: 638 PLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPM 817
PLVVFLSTQ RTV S+TSFSSL*RPRQP LMPCPGPQ+ML T TP PGP E QSSPVPM
Sbjct: 2 PLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPM 181
Query: 818 VELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT 997
VEL ML L + PTWTPSVFSTS GAV FTSFTVM E S+LMWKNLELSSLIP TV L+T
Sbjct: 182 VELVMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPETVPLVT 361
Query: 998 *NSTSV 1015
*NST+V
Sbjct: 362 *NSTNV 379
Score = 105 bits (224), Expect(3) = 6e-084
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +2 / +2
Query: 1016 LGIAFTLSVXXXXXTAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAM 1195
LGIAFT+ V TAVPWPSSVPEPV+ ML T DNSIQLA+YL+RS DPSRLPSSWM M
Sbjct: 482 LGIAFTVPVLAFL*TAVPWPSSVPEPVMTMLSTCDNSIQLALYLARSLDPSRLPSSWMVM 661
Score = 91.3 bits (193), Expect(3) = 5e-089
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = -2 / -2
Query: 1194 IAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVKAMPN 1015
I IQ KY ASWIELSHV+NI +TGSGTLDGQGTAVY K+KT VKAMPN
Sbjct: 660 ITIQLDGNLLGSNDLAKYKASWIELSHVDNIVMTGSGTLDGQGTAVYKKAKTGTVKAMPN 481
Query: 1014 TLVLFHVI 991
+ +I
Sbjct: 480 VRAMLTLI 457
Score = 86.3 bits (182), Expect(3) = 1e-040
Identities = 37/49 (75%), Positives = 38/49 (77%)
Frame = -3 / -3
Query: 1199 ATSPSSWMATCWDQTTWTSTRRAGSNCLTLTTSGSPARARWTARGPPFI 1053
A SPSS MATCWD TTW STRRAGS+C T TTS ARAR TAR PPFI
Sbjct: 665 APSPSSSMATCWDPTTWPSTRRAGSSCRTSTTSS*LARARSTARAPPFI 519
Score = 80.3 bits (169), Expect(3) = 1e-040
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQR 638
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H R
Sbjct: 127 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*R 2
Score = 78.0 bits (164), Expect(4) = 1e-038
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = +1 / +1
Query: 1015 VGHRLHVVGLALAINGGPLAVQRARAGDPDVVNVRQFDPARRXXXXXXXXXXXAIQLDGD 1194
VGHRLH G L INGG LAV+RARA DVV+VRQ DPAR AI+LDGD
Sbjct: 481 VGHRLHSAGFGLFINGGALAVERARASHDDVVDVRQLDPARLVLGQVVGSQQVAIELDGD 660
Query: 1195 VA 1200
A
Sbjct: 661 GA 666
Score = 75.3 bits (158), Expect(4) = 1e-038
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 124 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 258
Score = 46.4 bits (95), Expect(3) = 1e-040
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 1009 GAVSRDQRHCRRNQTTQLQVLP 944
GAV RDQRHC NQTTQLQVLP
Sbjct: 373 GAVLRDQRHCLWNQTTQLQVLP 308
Score = 34.5 bits (69), Expect(4) = 1e-038
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 964 *FDSGDSGVDHVKQHQCV 1017
*FDS DS V HV+QHQC+
Sbjct: 328 *FDSRDSAVGHVEQHQCL 381
Score = 30.4 bits (60), Expect(4) = 1e-038
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 637 AVGGVLEHAVPHR 675
AV G+LEHAVPHR
Sbjct: 1 AVSGLLEHAVPHR 39
Score = 24.0 bits (46), Expect(3) = 5e-089
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -2
Query: 1224 NFTGPCKGS 1198
NF GPCKG+
Sbjct: 687 NFVGPCKGA 661
Score = 22.6 bits (43), Expect(3) = 6e-084
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 1193 MLLPLHGPVKL 1225
++ PLHGP KL
Sbjct: 656 VMAPLHGPTKL 688
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 279 bits (603), Expect(2) = 7e-087
Identities = 110/173 (63%), Positives = 135/173 (78%)
Frame = -2 / +1
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVL NATV+GI LLNSKFFH+N+ + +T+KDV VTAP D NTDG+H+G SSK+
Sbjct: 61 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 240
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
+I +TIG GDDC+SIGPG G+ V +TCGPG GISVG LGRYKDEKDV+DI V++C L
Sbjct: 241 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 420
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
K T+NGVRIKSY DA V+TAS L +ENI M++VANPI+ID +CP K+C K
Sbjct: 421 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 579
Score = 203 bits (437), Expect(2) = 2e-060
Identities = 98/166 (59%), Positives = 114/166 (68%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MGLATSS+ MFS EAV T +AS+ DL+RTPL+VFLS Q T+MS+TSFS
Sbjct: 557 GQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFS 378
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGPQV T P+ PGP+E QSSP PMV M+ LEE P W PSV
Sbjct: 377 SLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLG 198
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSV 1015
S GAVT TS V + MWKNLE S +IP TVAL+ +ST+V
Sbjct: 197 LSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVIPETVALLQKSSTNV 60
Score = 64.8 bits (135), Expect(2) = 7e-087
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCS 382
S V+VKDVTF+NITGTSSTPEA+SLLCSE P +
Sbjct: 586 SKVTVKDVTFKNITGTSSTPEAVSLLCSEKSPAA 687
Score = 63.8 bits (133), Expect(4) = 9e-021
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 496 LARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAV 666
L A L+ A + VDDDGVGH++H VL E+GG H GV V LD A+ G+LE AV
Sbjct: 579 LGSADLVGAVLHVDDDGVGHVVHGYVLVVELGGSDHARGVLVGLDPDAIAGLLERAV 409
Score = 52.4 bits (108), Expect(2) = 2e-060
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +2 / -2
Query: 389 GCVSEQSRLMASGVDDVPVMLRNVTSLTETCEELL 493
G SEQSRL ASGVD+VPVM NVTSLT T E L
Sbjct: 680 GDFSEQSRLTASGVDEVPVMFLNVTSLTVTLESPL 576
Score = 45.1 bits (92), Expect(4) = 9e-021
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +1 / -1
Query: 766 DAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
D A + DAVV ADG D DLGG ++VDAV V V GRG
Sbjct: 309 DPGAARADGDAVVTHADGGAGDGDLGGVTNVDAVGVGAVPGRG 181
Score = 24.9 bits (48), Expect(4) = 9e-021
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1 / -1
Query: 403 AEQXXXXXXXXXXXXVAERDVLDGDM 480
AEQ V ERDVLDGD+
Sbjct: 666 AEQADGLRGG*GAGDVLERDVLDGDL 589
Score = 23.1 bits (44), Expect(4) = 9e-021
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / -3
Query: 954 WS*VV*FRRQWR*SRETAP 1010
WS * RR+WR R AP
Sbjct: 121 WSSAG*SRRRWRCCRSRAP 65
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 279 bits (603), Expect(2) = 1e-084
Identities = 110/173 (63%), Positives = 135/173 (78%)
Frame = -2 / +1
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVL NATV+GI LLNSKFFH+N+ + +T+KDV VTAP D NTDG+H+G SSK+
Sbjct: 64 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 243
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
+I +TIG GDDC+SIGPG G+ V +TCGPG GISVG LGRYKDEKDV+DI V++C L
Sbjct: 244 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 423
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
K T+NGVRIKSY DA V+TAS L +ENI M++VANPI+ID +CP K+C K
Sbjct: 424 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 582
Score = 203 bits (437), Expect(2) = 1e-059
Identities = 98/166 (59%), Positives = 114/166 (68%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MGLATSS+ MFS EAV T +AS+ DL+RTPL+VFLS Q T+MS+TSFS
Sbjct: 560 GQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFS 381
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGPQV T P+ PGP+E QSSP PMV M+ LEE P W PSV
Sbjct: 380 SLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLG 201
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSV 1015
S GAVT TS V + MWKNLE S +IP TVAL+ +ST+V
Sbjct: 200 LSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVIPETVALLQKSSTNV 63
Score = 63.8 bits (133), Expect(4) = 9e-021
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 496 LARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAV 666
L A L+ A + VDDDGVGH++H VL E+GG H GV V LD A+ G+LE AV
Sbjct: 582 LGSADLVGAVLHVDDDGVGHVVHGYVLVVELGGSDHARGVLVGLDPDAIAGLLERAV 412
Score = 57.4 bits (119), Expect(2) = 1e-084
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLC 403
S V+VKDVTF+NITGTSSTPEA+SLLC
Sbjct: 589 SKVTVKDVTFKNITGTSSTPEAVSLLC 669
Score = 49.6 bits (102), Expect(2) = 1e-059
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 401 EQSRLMASGVDDVPVMLRNVTSLTETCEELL 493
EQSRL ASGVD+VPVM NVTSLT T E L
Sbjct: 671 EQSRLTASGVDEVPVMFLNVTSLTVTLESPL 579
Score = 45.1 bits (92), Expect(4) = 9e-021
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +1 / -3
Query: 766 DAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
D A + DAVV ADG D DLGG ++VDAV V V GRG
Sbjct: 312 DPGAARADGDAVVTHADGGAGDGDLGGVTNVDAVGVGAVPGRG 184
Score = 24.9 bits (48), Expect(4) = 9e-021
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1 / -3
Query: 403 AEQXXXXXXXXXXXXVAERDVLDGDM 480
AEQ V ERDVLDGD+
Sbjct: 669 AEQADGFRGG*GAGDVLERDVLDGDL 592
Score = 23.1 bits (44), Expect(4) = 9e-021
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / -2
Query: 954 WS*VV*FRRQWR*SRETAP 1010
WS * RR+WR R AP
Sbjct: 124 WSSAG*SRRRWRCCRSRAP 68
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 269 bits (581), Expect(3) = 2e-083
Identities = 105/183 (57%), Positives = 140/183 (76%)
Frame = -2 / +3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 63 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 242
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDE 694
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS+G LGRYKDE
Sbjct: 243 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDE 422
Query: 693 KDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQ 514
KDV+DI V++C LK T+NG+RIK+Y DA SVLTAS + +ENI+ME+ +NPI+ID +CP
Sbjct: 423 KDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPN 602
Query: 513 KVC 505
K+C
Sbjct: 603 KIC 611
Score = 189 bits (407), Expect(3) = 8e-051
Identities = 93/168 (55%), Positives = 108/168 (64%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 598 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 419
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL RPR P LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV
Sbjct: 418 SLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLG 239
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
S GAVT TS M + MWKNL SS+IP T L T*+STS LG
Sbjct: 238 LSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELG 95
Score = 49.2 bits (101), Expect(3) = 2e-083
Identities = 18/30 (60%), Positives = 27/30 (90%)
Frame = -2 / +3
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLC 403
S +S V+ +DV+F+N+TGTS++PEA+SLLC
Sbjct: 618 SGASKVTRQDVSFKNVTGTSASPEAVSLLC 707
Score = 33.1 bits (66), Expect(3) = 2e-083
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 1098 ITGSGTLDGQGTAVYSKS 1045
ITG G LDGQG AV+SK+
Sbjct: 9 ITGKGKLDGQGPAVWSKN 62
Score = 29.5 bits (58), Expect(3) = 8e-051
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2 / -1
Query: 401 EQSRLMASGVDDVPVMLRNVTSLTETCE 484
EQSRL ASG+ +VPV TS T E
Sbjct: 709 EQSRLTASGLAEVPVTFLKETS*RVTLE 626
Score = 23.1 bits (44), Expect(3) = 8e-051
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / -1
Query: 1058 TAVPWPSSVPEPVI 1099
TA P PSS P PVI
Sbjct: 49 TAGPCPSSFPLPVI 8
>gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 643
Score = 307 bits (665), Expect = 3e-082
Identities = 126/140 (90%), Positives = 137/140 (97%)
Frame = -2 / +2
Query: 690 DVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQK 511
DV+D+TVR+CVLK TTNGVRIKSY DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+K
Sbjct: 2 DVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEK 181
Query: 510 VCPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNK 331
VCPGK+S+SSHV VKDVTFRNITGTSSTP+AISLLCS++QPCSGVSLIDVNVEYAGKNNK
Sbjct: 182 VCPGKKSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNK 361
Query: 330 TMAVCSNAKGTAKGSIEALA 271
TMAVCSNAKGTAKGS+EALA
Sbjct: 362 TMAVCSNAKGTAKGSVEALA 421
Score = 261 bits (565), Expect = 2e-068
Identities = 118/140 (84%), Positives = 122/140 (87%)
Frame = +2 / -2
Query: 272 ASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVML 451
A AS LPLAVPLALL TAMVLLFLPAYST TSM +TPLHGC EQSRLMA GVDDVPVML
Sbjct: 420 ARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVML 241
Query: 452 RNVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLM 631
RNVTSLT T EE L LPGHTF GQKYWSM MG ATSSILMFSKVR +AVSTDSAS+YDLM
Sbjct: 240 RNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLM 61
Query: 632 RTPLVVFLSTQFRTVMSLTS 691
RTPLVVFLSTQ RTV S+TS
Sbjct: 60 RTPLVVFLSTQSRTVTSVTS 1
Score = 218 bits (470), Expect = 2e-055
Identities = 101/134 (75%), Positives = 105/134 (78%)
Frame = +1 / -1
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
Q LDA+LGGALGVAA GHG VVLAGVLHV IDE AAAWL LRAEQ VA
Sbjct: 418 QGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVA 239
Query: 454 ERDVLDGDMRGVAPLARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDA 633
ERDVLD DMRGVA LA A+LL AEVLVDDDGV HLLHPDVLEG+M RQH LGV VRLDA
Sbjct: 238 ERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDA 59
Query: 634 HAVGGVLEHAVPHR 675
HAV G+LEHAVPHR
Sbjct: 58 HAVSGLLEHAVPHR 17
Score = 179 bits (385), Expect(2) = 8e-058
Identities = 76/115 (66%), Positives = 84/115 (73%)
Frame = -1 / +1
Query: 691 GRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHLREHQDGGGGQPHRHRPVLLPAE 512
GR+R GA LRAQE H RRAHQVVRGRRV ADG+ S LREHQDGGGG+PH HRPVLLP E
Sbjct: 1 GRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPRE 180
Query: 511 GMPWQAEQLLACLRQGXXXXXXXXXXXXXRGHQPALLGDAAMQRRLPHRCQRGVR 347
G+P Q E+LL+C RQG GHQPALL AMQRR+ HRC+RGVR
Sbjct: 181 GVPRQEERLLSCHRQGRHVPQHHGHVVHATGHQPALLAVTAMQRRVAHRCKRGVR 345
Score = 67.5 bits (141), Expect(2) = 8e-058
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -3 / +3
Query: 356 WSTPARTTKPWPSAATPRAPPREASRHW 273
WSTPARTT+PWP AATPRAPPR ASR W
Sbjct: 336 WSTPARTTRPWPCAATPRAPPRAASRPW 419
>gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10508479, DNA
sequence
Length = 525
Score = 303 bits (655), Expect = 6e-081
Identities = 122/149 (81%), Positives = 139/149 (93%)
Frame = -2 / +1
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVLF+V N TV+GIKLLNSKFFHINID S++ITVKDVN+TAP DVENTDGVHVG S+K+
Sbjct: 79 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 258
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
SI NSTIGTGDDC+S+GPG +GV+V++I CGPGQGIS+GCLGRYKDEKDV+D+TVR+CVL
Sbjct: 259 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 438
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENI 568
K TTNGVRIKSY DAESVLTASHLTFENI
Sbjct: 439 KKTTNGVRIKSYEDAESVLTASHLTFENI 525
Score = 269 bits (582), Expect = 7e-071
Identities = 120/149 (80%), Positives = 128/149 (85%)
Frame = +2 / -2
Query: 569 MFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQ 748
MFSKVR +AVSTDSAS+YDLMRTPLVVFLSTQ RTV S+TSFSSL*RPRQP LMPCPGPQ
Sbjct: 524 MFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQ 345
Query: 749 VMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSE 928
+ML T TP PGP E QSSPVPMVEL ML L + PTWTPSVFSTS GAV FTSFTVM E
Sbjct: 344 MMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFE 165
Query: 929 LSMLMWKNLELSSLIPATVALIT*NSTSV 1015
S+LMWKNLELSSLIP TV L+T*NST+V
Sbjct: 164 ASILMWKNLELSSLIPETVPLVT*NSTNV 78
Score = 122 bits (262), Expect(2) = 7e-034
Identities = 52/65 (80%), Positives = 54/65 (83%)
Frame = -1 / +3
Query: 763 GGQHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPS 584
G QHHLRPRAGHQ RLPRPLQG EGR+R GA LRAQE H RRAHQVVRGRRV ADG+ S
Sbjct: 330 GEQHHLRPRAGHQHRLPRPLQG*EGRDRRDGAGLRAQEDH*RRAHQVVRGRRVCADGVAS 509
Query: 583 HLREH 569
LREH
Sbjct: 510 DLREH 524
Score = 75.3 bits (158), Expect(3) = 2e-032
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / -1
Query: 760 HQDAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
H DAVAPG NRDAVVA ADG V DA LGG S++DAVRVLNV RG
Sbjct: 333 HHDAVAPGANRDAVVASADG*VGDAHLGGHSNMDAVRVLNVPRRG 199
Score = 69.8 bits (146), Expect(3) = 2e-032
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1 / -1
Query: 568 DVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPHR 675
DVLEG+M RQH LGV VRLDAHAV G+LEHAVPHR
Sbjct: 525 DVLEGQMRRRQHRLGVLVRLDAHAVSGLLEHAVPHR 418
Score = 46.4 bits (95), Expect(2) = 7e-034
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 1009 GAVSRDQRHCRRNQTTQLQVLP 944
GAV RDQRHC NQTTQLQVLP
Sbjct: 84 GAVLRDQRHCLWNQTTQLQVLP 149
Score = 34.5 bits (69), Expect(3) = 2e-032
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / -1
Query: 964 *FDSGDSGVDHVKQHQCV 1017
*FDS DS V HV+QHQC+
Sbjct: 129 *FDSRDSAVGHVEQHQCL 76
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 233 bits (504), Expect(2) = 2e-080
Identities = 90/138 (65%), Positives = 109/138 (78%)
Frame = -2 / +1
Query: 909 KDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQG 730
KDV VTAP D NTDG+H+G SSK++I +TIG GDDC+SIGPG G+ V +TCGPG G
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 729 ISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVA 550
ISVG LGRYKDEKDV+DI V++C LK T+NGVRIKSY DA V+TAS L +ENI M++VA
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 549 NPIVIDQYFCPQKVCPGK 496
NPI+ID +CP K+C K
Sbjct: 370 NPIIIDMKYCPNKICTAK 423
Score = 169 bits (363), Expect(2) = 3e-056
Identities = 81/130 (62%), Positives = 92/130 (70%)
Frame = +2 / -3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MGLATSS+ MFS EAV T +AS+ DL+RTPL+VFLS Q T+MS+TSFS
Sbjct: 401 GQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFS 222
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGPQV T P+ PGP+E QSSP PMV M+ LEE P W PSV
Sbjct: 221 SLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLG 42
Query: 878 TSAGAVTFTS 907
S GAVT TS
Sbjct: 41 LSPGAVTVTS 12
Score = 88.6 bits (187), Expect(2) = 2e-080
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNN 334
S V+VKDVTF+NITGTSSTPEA+SLLCS+ PCSGV++ ++ VEY G NN
Sbjct: 430 SKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDNIKVEYKGTNN 579
Score = 72.5 bits (152), Expect(2) = 3e-056
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = +2 / -3
Query: 335 LFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTETCEELL 493
L +P YSTL TPL G +SEQSRL ASGVD+VPVM NVTSLT T E L
Sbjct: 578 LLVPLYSTLMLSMVTPLQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPL 420
Score = 63.8 bits (133), Expect(3) = 3e-023
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 496 LARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAV 666
L A L+ A + VDDDGVGH++H VL E+GG H GV V LD A+ G+LE AV
Sbjct: 423 LGSADLVGAVLHVDDDGVGHVVHGYVLVVELGGSDHARGVLVGLDPDAIAGLLERAV 253
Score = 45.1 bits (92), Expect(3) = 3e-023
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +1 / -2
Query: 766 DAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRVLNVGGRG 894
D A + DAVV ADG D DLGG ++VDAV V V GRG
Sbjct: 153 DPGAARADGDAVVTHADGGAGDGDLGGVTNVDAVGVGAVPGRG 25
Score = 39.6 bits (80), Expect(3) = 3e-023
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +1 / -2
Query: 334 VVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVAERDVLDGDM 480
VV A VL +D+ GDAAA + AEQ V ERDVLDGD+
Sbjct: 579 VVGALVLDLDVIHGDAAAGDFVGAEQADGLRGG*GAGDVLERDVLDGDL 433
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 275 bits (594), Expect(2) = 6e-079
Identities = 106/165 (64%), Positives = 131/165 (79%)
Frame = -2 / +1
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
NATV+GI LLNSKFFH+N+ + +T+KDV VTAP D NTDG+H+G SSK++I +TIG
Sbjct: 13 NATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIG 192
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVR 631
GDDC+SIGPG G+ V +TCGPG GISVG LGRYKDEKDV+DI V++C LK T+NGVR
Sbjct: 193 VGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVR 372
Query: 630 IKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
IKSY DA V+TAS L +ENI M++VANPI+ID +CP K+C K
Sbjct: 373 IKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 507
Score = 198 bits (427), Expect(2) = 4e-054
Identities = 95/159 (59%), Positives = 109/159 (68%)
Frame = +2 / -3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MGLATSS+ MFS EAV T +AS+ DL+RTPL+VFLS Q T+MS+TSFS
Sbjct: 485 GQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFS 306
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGPQV T P+ PGP+E QSSP PMV M+ LEE P W PSV
Sbjct: 305 SLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLG 126
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALI 994
S GAVT TS V + MWKNLE S +IP TVAL+
Sbjct: 125 LSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVIPETVALL 9
Score = 42.3 bits (86), Expect(2) = 6e-079
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTP 424
S V+VKDVTF+NITGTSSTP
Sbjct: 514 SKVTVKDVTFKNITGTSSTP 573
Score = 35.9 bits (72), Expect(2) = 4e-054
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 425 GVDDVPVMLRNVTSLTETCEELL 493
GVD+VPVM NVTSLT T E L
Sbjct: 572 GVDEVPVMFLNVTSLTVTLESPL 504
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 226 bits (489), Expect(3) = 4e-078
Identities = 91/159 (57%), Positives = 120/159 (75%)
Frame = -2 / +2
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 215 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 394
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDE 694
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS+G LGRYKDE
Sbjct: 395 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDE 574
Query: 693 KDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTF 577
KDV+DI V++C LK T+NG+RIK+Y DA SVLTAS + +
Sbjct: 575 KDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHY 691
Score = 168 bits (361), Expect(3) = 3e-057
Identities = 80/144 (55%), Positives = 94/144 (65%)
Frame = +2 / -3
Query: 590 EAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKT 769
EAVST++AS+Y L+R PL+VF S Q T+MS+TSFSSL RPR P LMP PGP V T
Sbjct: 678 EAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFT 499
Query: 770 PLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWK 949
+ PGP+E QSSP PM M+ +E P W PSV S GAVT TS M + MWK
Sbjct: 498 LVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWK 319
Query: 950 NLELSSLIPATVALIT*NSTSVLG 1021
NL SS+IP T L T*+STS LG
Sbjct: 318 NLAFSSVIPDTSPLFT*SSTSELG 247
Score = 53.8 bits (111), Expect(3) = 4e-078
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2 / +2
Query: 1260 VIPKGDYLVGPLNFTGPCKG 1201
+IPKGDYLVGPLNFTGPCKG
Sbjct: 2 LIPKGDYLVGPLNFTGPCKG 61
Score = 52.8 bits (109), Expect(3) = 4e-078
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +2
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 62 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 214
Score = 51.0 bits (105), Expect(3) = 3e-057
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 201 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 70
Score = 44.1 bits (90), Expect(3) = 3e-057
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / -3
Query: 1202 PLHGPVKLRGPTR*SPLGI 1258
PLHGPVKL GPTR*SPLG+
Sbjct: 60 PLHGPVKLSGPTR*SPLGM 4
>gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_C07_A002 5', mRNA sequence
Length = 768
Score = 142 bits (304), Expect(4) = 7e-077
Identities = 55/99 (55%), Positives = 73/99 (73%)
Frame = -2 / +3
Query: 1017 NTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSK 838
N+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D NTDG+H+G SS
Sbjct: 471 NSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 650
Query: 837 ISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISV 721
++I N+ IG GDDC+SIGPG V + +TCGPG GIS+
Sbjct: 651 VTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISI 767
Score = 117 bits (251), Expect(4) = 7e-077
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +3
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 150 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 320
Score = 103 bits (219), Expect(3) = 3e-052
Identities = 49/96 (51%), Positives = 56/96 (58%)
Frame = +2 / -3
Query: 725 LMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFT 904
LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV S GAVT T
Sbjct: 763 LMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVT 584
Query: 905 SFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTS 1012
S M + MWKNL SS+IP T L T*+STS
Sbjct: 583 SLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTS 476
Score = 92.3 bits (195), Expect(3) = 3e-052
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -3
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 319 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 152
Score = 52.8 bits (109), Expect(4) = 7e-077
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +3
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 321 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 473
Score = 51.0 bits (105), Expect(3) = 3e-052
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 460 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 329
Score = 35.0 bits (70), Expect(4) = 7e-077
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 12 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 98
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 153 bits (329), Expect(3) = 2e-075
Identities = 61/114 (53%), Positives = 82/114 (71%)
Frame = -2 / +1
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 358 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 537
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCL 712
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS+G L
Sbjct: 538 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSL 699
Score = 119 bits (254), Expect(3) = 6e-057
Identities = 55/104 (52%), Positives = 62/104 (59%)
Frame = +2 / -1
Query: 710 PRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAG 889
PR P LMPCPGP V T + PGP+E QSSP PM M+ +E P W PSV S G
Sbjct: 701 PRLPMLMPCPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPG 522
Query: 890 AVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
AVT TS M + MWKNL SS+IP T L T*+STS LG
Sbjct: 521 AVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELG 390
Score = 117 bits (251), Expect(3) = 2e-075
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 34 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 204
Score = 92.3 bits (195), Expect(3) = 6e-057
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 203 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 36
Score = 52.8 bits (109), Expect(3) = 2e-075
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +1
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 205 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 357
Score = 51.0 bits (105), Expect(3) = 6e-057
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 344 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 213
>gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 590
Score = 131 bits (281), Expect(3) = 8e-075
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -2 / +3
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGS 1198
TFDISKLGAT DGKTD TKAVQDAWTSAC ATGSATV+IPKGDYLVGPLNF GPCKG+
Sbjct: 186 TFDISKLGATGDGKTDSTKAVQDAWTSACRATGSATVLIPKGDYLVGPLNFVGPCKGA 359
Score = 130 bits (279), Expect(3) = 5e-071
Identities = 57/77 (74%), Positives = 63/77 (81%)
Frame = +2 / -2
Query: 965 SLIPATVALIT*NSTSVLGIAFTLSVXXXXXTAVPWPSSVPEPVIPMLLT*DNSIQLAVY 1144
SLIP TV L+T*NST+V GIAFT+ V TAVPWPSSVPEPV+ ML T DNSIQLA+Y
Sbjct: 589 SLIPETVPLVT*NSTNVFGIAFTVPVLAFL*TAVPWPSSVPEPVMTMLSTCDNSIQLALY 410
Query: 1145 LSRSFDPSRLPSSWMAM 1195
L+RS DPSRLPSSWM M
Sbjct: 409 LARSLDPSRLPSSWMVM 359
Score = 118 bits (253), Expect(3) = 8e-075
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -2 / +3
Query: 1194 IAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVKAMPN 1015
I IQ KY ASWIELSHV+NI +TGSGTLDGQGTAVY K+KT VKAMPN
Sbjct: 360 ITIQLDGNLLGSNDLAKYKASWIELSHVDNIVMTGSGTLDGQGTAVYKKAKTGTVKAMPN 539
Query: 1014 TLVLFHVINATVAGIKL 964
TLVLF+V N TV+GIKL
Sbjct: 540 TLVLFYVTNGTVSGIKL 590
Score = 116 bits (247), Expect(3) = 5e-071
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = +2 / -2
Query: 1193 MLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSNV 1372
++ PLHGP KLRGPTR*SPLG++TVALPVA HADVHAS TAFV+SVLPS VAPSLEMSNV
Sbjct: 364 VMAPLHGPTKLRGPTR*SPLGMSTVALPVALHADVHAS*TAFVESVLPSPVAPSLEMSNV 185
Score = 111 bits (238), Expect(3) = 9e-061
Identities = 51/64 (79%), Positives = 55/64 (85%)
Frame = +1 / -1
Query: 1201 ALAWPSEVERADQVVALGDHHRGASGRFAR*RPRVLDCLCAVRLAVAGRAELGDVERPAA 1380
ALA +EVERADQ+VALGD HRGASGR AR*RPRVL+ LC VRLAVA RAELGDVERPA
Sbjct: 356 ALARANEVERADQIVALGDEHRGASGRSAR*RPRVLNRLCGVRLAVARRAELGDVERPAG 177
Query: 1381 ASSS 1392
+ SS
Sbjct: 176 SRSS 165
Score = 105 bits (224), Expect(3) = 9e-061
Identities = 48/79 (60%), Positives = 52/79 (65%)
Frame = +1 / -1
Query: 964 *FDSGDSGVDHVKQHQCVGHRLHVVGLALAINGGPLAVQRARAGDPDVVNVRQFDPARRX 1143
*FDS DS V HV+QHQCV HRLH G L INGG LAV+RARA DVV+VRQ DPAR
Sbjct: 590 *FDSRDSAVGHVEQHQCVWHRLHSAGFGLFINGGALAVERARASHDDVVDVRQLDPARLV 411
Query: 1144 XXXXXXXXXXAIQLDGDVA 1200
AI+LDGD A
Sbjct: 410 LGQVVGSQQVAIELDGDGA 354
Score = 87.7 bits (185), Expect(4) = 2e-054
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -1 / +2
Query: 1363 HLQARRDQRRQDGLHKGSPGXXXXXXXXXRKRHGGDPQGRLPGRPSQLHWAMQGQQH 1193
HLQARRD RRQDGLHKG RKRHG PQGRL GRPSQL W +QG+ H
Sbjct: 194 HLQARRDGRRQDGLHKGGSRRVDVSVQSDRKRHGAHPQGRLSGRPSQLRWPVQGRHH 364
Score = 86.3 bits (182), Expect(4) = 2e-054
Identities = 37/49 (75%), Positives = 38/49 (77%)
Frame = -3 / +1
Query: 1199 ATSPSSWMATCWDQTTWTSTRRAGSNCLTLTTSGSPARARWTARGPPFI 1053
A SPSS MATCWD TTW STRRAGS+C T TTS ARAR TAR PPFI
Sbjct: 355 APSPSSSMATCWDPTTWPSTRRAGSSCRTSTTSS*LARARSTARAPPFI 501
Score = 81.3 bits (171), Expect(4) = 2e-039
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -1 / +2
Query: 1198 QHRHPAGWQPAGIKRPGQVHGELDRIVSR*QHRDHRLGHAGRP 1070
+H HPA WQPAGI+RPGQV GELDR+V+R QHR LGHA RP
Sbjct: 356 RHHHPARWQPAGIQRPGQVQGELDRVVARRQHRHDWLGHARRP 484
Score = 72.1 bits (151), Expect(3) = 8e-075
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2 / +3
Query: 1527 RPQEGEMASAHNALRVFFILAVVCAVCTAKRTGA 1426
RP +GEMASA NALRVFFILA++CAVCTAKRTGA
Sbjct: 36 RPPQGEMASASNALRVFFILAILCAVCTAKRTGA 137
Score = 62.9 bits (131), Expect(3) = 5e-071
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1 / -1
Query: 1381 ASSSATGGCRRFFLVGSCPFRCAYGTYHG*DEKHPESVVCGSHFSFLWP 1527
A S ++ C R + S PFRCAY *DE+HPES+ CGSHFS WP
Sbjct: 182 AGSRSSRVCCRVSRLCSGPFRCAYRA*DR*DEEHPESIACGSHFSLWWP 36
Score = 61.6 bits (128), Expect(4) = 2e-054
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -3 / +1
Query: 1526 GHRKEKWLPHTTLSGCFSS*PWYVPYAQRKGQEPTRKNRRQ 1404
GH +EKWLP LSGC SS* Y YAQRKG E R+ R+Q
Sbjct: 37 GHHREKWLPQAMLSGCSSS*RSYARYAQRKGPEQRRETRQQ 159
Score = 59.7 bits (124), Expect(4) = 2e-039
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -1 / +2
Query: 1525 ATGRRNGFRTQRSPGVFHPSRGMCRMHSEKDRSQQGRIG 1409
AT RNGFR Q S GV HPS M MHSEKDRS+ GR+G
Sbjct: 38 ATTGRNGFRKQCSQGVLHPSDPMRGMHSEKDRSKDGRLG 154
Score = 57.9 bits (120), Expect(3) = 9e-061
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = +3 / -3
Query: 1389 QRHRGLPPILPCWLLSFSLCIRHIPRLG*KTPGERCVRKPFLLPVA 1526
Q+ + L P LP L SFSLCI I LG*+TP E C+RKPFL VA
Sbjct: 174 QKQQSLLPSLPSLLRSFSLCIPRIGSLG*RTP*EHCLRKPFLPVVA 37
Score = 53.8 bits (111), Expect(4) = 2e-039
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3 / +1
Query: 1283 KRPEAPRW*SPRATTWSALSTSLGHARAATSPSS 1182
+RPEAPR SPRAT WSALSTSL ARA + SS
Sbjct: 274 ERPEAPRCSSPRATIWSALSTSLARARAPSPSSS 375
Score = 36.3 bits (73), Expect(4) = 2e-054
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +2
Query: 1021 AQHTGAVSRDQRHCRRNQT 965
A+H GAV RDQRHC NQT
Sbjct: 533 AKHIGAVLRDQRHCLWNQT 589
Score = 32.2 bits (64), Expect(4) = 2e-039
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 1013 HWCCFT*STPLSPESN 966
HWCC T* T LS ESN
Sbjct: 541 HWCCST*PTALSLESN 588
>gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 729
Score = 206 bits (444), Expect(2) = 1e-074
Identities = 76/149 (51%), Positives = 105/149 (70%)
Frame = -2 / +2
Query: 951 FFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCN 772
FFH+NI S+++ + V V AP + NTDG+H+G S ++I +TIG GDDC+SIGPG
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 771 GVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTA 592
+ +D + CGPG GISVG LGRYKDEKDV D+ V+ C L TTNG+RIKSY D++S
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 591 SHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ +E++ M+ V+ PI+IDQ +CP +C
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNIC 448
Score = 138 bits (295), Expect(2) = 1e-043
Identities = 69/145 (47%), Positives = 79/145 (54%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSM +G T S++ S + D S+YDLMR PLVV S Q T S TSFS
Sbjct: 435 GQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSSTSFS 256
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGP + S + L PGP+E QSSP PMV M+ E P W PSV
Sbjct: 255 SLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESPMWIPSVLG 76
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKN 952
GA T T ML WKN
Sbjct: 75 LFPGAFTVTLSINTFLLAKMLRWKN 1
Score = 96.8 bits (205), Expect(2) = 1e-074
Identities = 41/75 (54%), Positives = 54/75 (72%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
RS +S V+V DV F+NI GTS+TPEAI+L C++ PC GV L +V+++Y NNKTMAVC
Sbjct: 452 RSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKYNKSNNKTMAVC 631
Query: 315 SNAKGTAKGSIEALA 271
NA G + G + LA
Sbjct: 632 KNAVGKSFGLSKELA 676
Score = 61.6 bits (128), Expect(2) = 1e-043
Identities = 35/86 (40%), Positives = 46/86 (53%)
Frame = +2 / -1
Query: 227 HACMQKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQ 406
+ CM+ + + AS+ P +P A LQTAMVLL Y T TP HG +S Q
Sbjct: 720 YICMRVGVGSELQMHASSFDKPKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQ 541
Query: 407 SRLMASGVDDVPVMLRNVTSLTETCE 484
+MASGV +VP M TS+T T +
Sbjct: 540 LSVMASGVLEVPWMFLKTTSVTATLD 463
Score = 55.1 bits (114), Expect(3) = 4e-021
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A ++RA +LVDDD V ++H VL E+G LGV VRLDA AVGG + A H
Sbjct: 448 ADVVRAVLLVDDDRVRDVVHGHVLVHELGDLGRRLGVLVRLDAQAVGGAHQRATFH 281
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 32/88 (36%), Positives = 39/88 (44%)
Frame = +1 / -3
Query: 232 MHAKGRSSSDQASRQCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQ 411
MHA +R+ L + G A GV ADGHG VV VL VD+ E A AW + A +
Sbjct: 715 MHACWCGFRTSDARELL*QAEGLADGVLADGHGLVVGLVVLDVDVVELHALAWQVVGAVE 536
Query: 412 XXXXXXXXXXXXVAERDVLDGDMRGVAP 495
V E DV DG + P
Sbjct: 535 RDGLGRVGGAVDVLEDDVGDGHLGRAGP 452
Score = 38.2 bits (77), Expect(3) = 4e-021
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1 / -3
Query: 766 DAVAPGPNRDAVVAGADGRVEDADLGGASDVDAVRV 873
D +A GP+ DAVVA ADG D + VD+VRV
Sbjct: 187 DRLAAGPDGDAVVADADGGAADGHVLRVPHVDSVRV 80
>gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 647
Score = 274 bits (592), Expect = 3e-072
Identities = 113/123 (91%), Positives = 121/123 (98%)
Frame = -2 / -2
Query: 639 GVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSVKDV 460
GVRIKSY DAESVLTASHLTFENIRMEEVANPI+IDQYFCP+KVCPGK+S+SSHV VKDV
Sbjct: 646 GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDV 467
Query: 459 TFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSIE 280
TFRNITGTSSTP+AISLLCS++QPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS+E
Sbjct: 466 TFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSVE 287
Query: 279 ALA 271
ALA
Sbjct: 286 ALA 278
Score = 231 bits (498), Expect = 3e-059
Identities = 103/123 (83%), Positives = 106/123 (86%)
Frame = +2 / +3
Query: 272 ASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVML 451
A AS LPLAVPLALL TAMVLLFLPAYST TSM +TPLHGC EQSRLMA GVDDVPVML
Sbjct: 279 ARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVML 458
Query: 452 RNVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLM 631
RNVTSLT T EE L LPGHTF GQKYWSM MG ATSSILMFS VR +AVSTDSAS+YDLM
Sbjct: 459 RNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSXVRCDAVSTDSASSYDLM 638
Query: 632 RTP 640
RTP
Sbjct: 639 RTP 647
Score = 189 bits (407), Expect = 1e-046
Identities = 90/122 (73%), Positives = 93/122 (76%)
Frame = +1 / +2
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
Q LDA+LGGALGVAA GHG VVLAGVLHV IDE AAAWL LRAEQ VA
Sbjct: 281 QGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVA 460
Query: 454 ERDVLDGDMRGVAPLARAYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDA 633
ERDVLD DMRGVA LA A+LL AEVLVDDDGV HLLHPDVLE +M RQH LGV VRLDA
Sbjct: 461 ERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEXQMRRRQHRLGVLVRLDA 640
Query: 634 HA 639
HA
Sbjct: 641 HA 646
Score = 153 bits (329), Expect(2) = 4e-050
Identities = 64/98 (65%), Positives = 71/98 (72%)
Frame = -1 / -1
Query: 640 RRAHQVVRGRRVRADGLPSHLREHQDGGGGQPHRHRPVLLPAEGMPWQAEQLLACLRQGX 461
RRAHQVVRGRRV ADG+ S REHQDGGGG+PH HRPVLLP EG+P Q E+LL+C RQG
Sbjct: 647 RRAHQVVRGRRVCADGVASDXREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGR 468
Query: 460 XXXXXXXXXXXXRGHQPALLGDAAMQRRLPHRCQRGVR 347
GHQPALL AMQRR+ HRC+RGVR
Sbjct: 467 HVPQHHGHVVHATGHQPALLAVTAMQRRVAHRCKRGVR 354
Score = 67.5 bits (141), Expect(2) = 4e-050
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -3 / -3
Query: 356 WSTPARTTKPWPSAATPRAPPREASRHW 273
WSTPARTT+PWP AATPRAPPR ASR W
Sbjct: 363 WSTPARTTRPWPCAATPRAPPRAASRPW 280
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 152 bits (326), Expect(4) = 4e-072
Identities = 60/112 (53%), Positives = 81/112 (72%)
Frame = -2 / +2
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 377 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 556
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVG 718
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS+G
Sbjct: 557 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIG 712
Score = 109 bits (233), Expect(3) = 4e-049
Identities = 52/101 (51%), Positives = 59/101 (58%)
Frame = +2 / -2
Query: 719 PTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVT 898
P LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV S GAVT
Sbjct: 711 PMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVT 532
Query: 899 FTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
TS M + MWKNL SS+IP T L T*+STS LG
Sbjct: 531 VTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELG 409
Score = 91.8 bits (194), Expect(4) = 4e-072
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -2 / +2
Query: 1326 DCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 98 DSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 223
Score = 75.3 bits (158), Expect(3) = 4e-049
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S
Sbjct: 222 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLS 97
Score = 52.8 bits (109), Expect(4) = 4e-072
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +2
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 224 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 376
Score = 51.0 bits (105), Expect(3) = 4e-049
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 363 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 232
Score = 35.0 bits (70), Expect(4) = 4e-072
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 11 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 97
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 172 bits (371), Expect(2) = 6e-072
Identities = 64/101 (63%), Positives = 82/101 (81%)
Frame = -2 / +2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRI 628
GDDC+SIGPG V + +TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RI
Sbjct: 2 GDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRI 181
Query: 627 KSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
K+Y DA SVLTAS + +ENI+ME+ +NPI+ID +CP K+C
Sbjct: 182 KAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 304
Score = 121 bits (258), Expect(2) = 6e-072
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +2
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 311 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 490
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 491 NAKGSATGCLKELA 532
Score = 118 bits (253), Expect(2) = 1e-046
Identities = 58/97 (59%), Positives = 68/97 (70%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 291 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 112
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSP 808
SL RPR P LMP PGP V T + PGP+E QSSP
Sbjct: 111 SLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSP 1
Score = 93.2 bits (197), Expect(2) = 2e-024
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = -1 / +1
Query: 757 QHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHL 578
+ H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L
Sbjct: 52 RRHMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 231
Query: 577 REHQDGGGGQPHRHRPVLLP 518
EHQDGG +PH HR +LP
Sbjct: 232 *EHQDGGLVEPHYHRHEVLP 291
Score = 90.4 bits (191), Expect(2) = 1e-046
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -2
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 564 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 385
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 384 ASGLAEVPVTFLKETSLTVTLE 319
Score = 68.9 bits (144), Expect(2) = 2e-022
Identities = 34/73 (46%), Positives = 42/73 (57%)
Frame = +1 / -1
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A VL +D+ GDA+A + AEQ V
Sbjct: 529 ELLEAACGAALGVLAYGHGLVVFATVLDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVL 350
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 349 EGDVLDGDLGGAA 311
Score = 59.3 bits (123), Expect(2) = 2e-022
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -1
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 304 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 137
Score = 44.6 bits (91), Expect(2) = 2e-024
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -3 / +3
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
ST A+TT+PWP A TPRA P+ ASR
Sbjct: 450 STVAKTTRPWPYAKTPRAAPQAASR 524
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 125 bits (267), Expect(4) = 5e-071
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = -2 / +2
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 458 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 637
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPG 778
NTDG+H+G SS ++I N+ IG GDDC+SIGPG
Sbjct: 638 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 733
Score = 117 bits (251), Expect(4) = 5e-071
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 134 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 304
Score = 94.1 bits (199), Expect(3) = 2e-049
Identities = 43/81 (53%), Positives = 49/81 (60%)
Frame = +2 / -2
Query: 779 PGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLE 958
PGP+E QSSP PM M+ +E P W PSV S GAVT TS M + MWKNL
Sbjct: 732 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 553
Query: 959 LSSLIPATVALIT*NSTSVLG 1021
SS+IP T L T*+STS LG
Sbjct: 552 FSSVIPDTSPLFT*SSTSELG 490
Score = 92.3 bits (195), Expect(3) = 2e-049
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 303 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 136
Score = 52.8 bits (109), Expect(4) = 5e-071
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +2
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 305 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 457
Score = 51.0 bits (105), Expect(3) = 2e-049
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 444 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 313
Score = 32.2 bits (64), Expect(4) = 5e-071
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 1512 EMASAHNALRVFFILAVVCAVCTAK 1438
+MA NA+R FF+LA VCA K
Sbjct: 8 KMACTGNAMRAFFLLAFVCAAHAGK 82
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 233 bits (504), Expect(2) = 6e-071
Identities = 90/138 (65%), Positives = 109/138 (78%)
Frame = -2 / +1
Query: 909 KDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQG 730
KDV VTAP D NTDG+H+G SSK++I +TIG GDDC+SIGPG G+ V +TCGPG G
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 729 ISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVA 550
ISVG LGRYKDEKDV+DI V++C LK T+NGVRIKSY DA V+TAS L +ENI M++VA
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 549 NPIVIDQYFCPQKVCPGK 496
NPI+ID +CP K+C K
Sbjct: 370 NPIIIDMKYCPNKICTAK 423
Score = 169 bits (363), Expect(2) = 2e-049
Identities = 81/130 (62%), Positives = 92/130 (70%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MGLATSS+ MFS EAV T +AS+ DL+RTPL+VFLS Q T+MS+TSFS
Sbjct: 401 GQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFS 222
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGPQV T P+ PGP+E QSSP PMV M+ LEE P W PSV
Sbjct: 221 SLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLG 42
Query: 878 TSAGAVTFTS 907
S GAVT TS
Sbjct: 41 LSPGAVTVTS 12
Score = 57.0 bits (118), Expect(2) = 6e-071
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSE 397
S V+VKDVTF+NITGTSSTP A+SLLCS+
Sbjct: 430 SKVTVKDVTFKNITGTSSTPGAVSLLCSD 516
Score = 49.6 bits (102), Expect(2) = 2e-049
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +2 / -2
Query: 395 VSEQSRLMASGVDDVPVMLRNVTSLTETCEELL 493
+SEQSRL A GVD+VPVM NVTSLT T E L
Sbjct: 518 LSEQSRLTAPGVDEVPVMFLNVTSLTVTLESPL 420
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 125 bits (267), Expect(4) = 3e-070
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = -2 / +2
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 467 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 646
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPG 778
NTDG+H+G SS ++I N+ IG GDDC+SIGPG
Sbjct: 647 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 742
Score = 112 bits (239), Expect(4) = 3e-070
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSA TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 143 SFDISKLGASGDGKKDSTKAVQEAWTSARGGTGKQTILIPKGDYLVGPLNFTGPCKG 313
Score = 94.1 bits (199), Expect(3) = 2e-048
Identities = 43/81 (53%), Positives = 49/81 (60%)
Frame = +2 / -2
Query: 779 PGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLE 958
PGP+E QSSP PM M+ +E P W PSV S GAVT TS M + MWKNL
Sbjct: 741 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 562
Query: 959 LSSLIPATVALIT*NSTSVLG 1021
SS+IP T L T*+STS LG
Sbjct: 561 FSSVIPDTSPLFT*SSTSELG 499
Score = 88.6 bits (187), Expect(3) = 2e-048
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV ADVHAS TAFV S LPS AP+L MSN
Sbjct: 312 PLHGPVKLSGPTR*SPLGMRIVCFPVPPRADVHASCTAFVLSFLPSPEAPNLLMSN 145
Score = 52.8 bits (109), Expect(4) = 3e-070
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +2
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 314 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 466
Score = 51.0 bits (105), Expect(3) = 2e-048
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 453 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 322
Score = 35.0 bits (70), Expect(4) = 3e-070
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 5 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 91
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 226 bits (487), Expect(3) = 1e-068
Identities = 85/146 (58%), Positives = 113/146 (77%)
Frame = -2 / +3
Query: 942 INIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVL 763
+N+ + + +KDV VTAP D NTDG+H+G SS ++I N+ IG GDDC+SIGPG V
Sbjct: 222 MNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVN 401
Query: 762 VDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHL 583
+ +TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA SVLTAS +
Sbjct: 402 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKI 581
Query: 582 TFENIRMEEVANPIVIDQYFCPQKVC 505
+ENI+ME+ +NPI+ID +CP K+C
Sbjct: 582 HYENIKMEDSSNPIIIDMKYCPNKIC 659
Score = 154 bits (331), Expect(2) = 1e-040
Identities = 75/134 (55%), Positives = 87/134 (64%)
Frame = +2 / -3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 646 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 467
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL RPR P LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV
Sbjct: 466 SLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLG 287
Query: 878 TSAGAVTFTSFTVM 919
S GAVT TS M
Sbjct: 286 LSPGAVTVTSLINM 245
Score = 46.0 bits (94), Expect(3) = 1e-068
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEAT 1276
+FDISKLGA+ DGK D TKAVQ+A T + T
Sbjct: 151 SFDISKLGASGDGKKDSTKAVQEA*TCSSART 246
Score = 37.7 bits (76), Expect(2) = 1e-040
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2 / -2
Query: 1295 VHASWTAFVQSVLPSLVAPSLEMSN 1369
VHAS TAFV S LPS AP+L MSN
Sbjct: 227 VHASCTAFVLSFLPSPEAPNLLMSN 153
Score = 35.0 bits (70), Expect(3) = 1e-068
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +1
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 13 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 99
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 160 bits (344), Expect(2) = 3e-068
Identities = 60/97 (61%), Positives = 78/97 (80%)
Frame = -2 / +1
Query: 795 VSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYV 616
+SIGPG V + +TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y
Sbjct: 1 ISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYE 180
Query: 615 DAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
DA SVLTAS + +ENI+ME+ +NPI+ID +CP K+C
Sbjct: 181 DAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 291
Score = 121 bits (258), Expect(2) = 3e-068
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +1
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 298 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 477
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 478 NAKGSATGCLKELA 519
Score = 110 bits (234), Expect(2) = 5e-044
Identities = 54/92 (58%), Positives = 64/92 (69%)
Frame = +2 / -3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 278 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 99
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIE 793
SL RPR P LMP PGP V T + PGP+E
Sbjct: 98 SLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 3
Score = 93.2 bits (197), Expect(2) = 6e-024
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = -1 / +3
Query: 757 QHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHL 578
+ H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L
Sbjct: 39 RRHMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 218
Query: 577 REHQDGGGGQPHRHRPVLLP 518
EHQDGG +PH HR +LP
Sbjct: 219 *EHQDGGLVEPHYHRHEVLP 278
Score = 90.4 bits (191), Expect(2) = 5e-044
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -3
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 551 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 372
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 371 ASGLAEVPVTFLKETSLTVTLE 306
Score = 67.0 bits (140), Expect(2) = 7e-022
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1 / -2
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A V +D+ GDA+A + AEQ V
Sbjct: 516 ELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVL 337
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 336 EGDVLDGDLGGAA 298
Score = 59.3 bits (123), Expect(2) = 7e-022
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -2
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 291 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 124
Score = 43.2 bits (88), Expect(2) = 6e-024
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +2
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
+T A+TT+PWP A TPRA P+ ASR
Sbjct: 437 NTVAKTTRPWPYAKTPRAAPQAASR 511
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 148 bits (317), Expect(3) = 4e-068
Identities = 59/110 (53%), Positives = 79/110 (71%)
Frame = -2 / -2
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 330 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 151
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGIS 724
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS
Sbjct: 150 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGIS 1
Score = 106 bits (227), Expect(3) = 4e-050
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = +2 / +2
Query: 725 LMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFT 904
LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV S GAVT T
Sbjct: 2 LMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVT 181
Query: 905 SFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
S M + MWKNL SS+IP T L T*+STS LG
Sbjct: 182 SLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELG 298
Score = 99.1 bits (210), Expect(3) = 4e-068
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -2 / -2
Query: 1338 DGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 621 DGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 484
Score = 81.7 bits (172), Expect(3) = 4e-050
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPS 1339
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS
Sbjct: 485 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPS 622
Score = 52.8 bits (109), Expect(3) = 4e-068
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / -2
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 483 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 331
Score = 51.0 bits (105), Expect(3) = 4e-050
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 344 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 475
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 117 bits (251), Expect(4) = 8e-068
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 143 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 313
Score = 111 bits (237), Expect(4) = 8e-068
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = -2 / +2
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 467 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 646
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDC 796
NTDG+H+G SS ++I N+ IG GDDC
Sbjct: 647 NTDGIHMGDSSGVTIENTVIGVGDDC 724
Score = 92.3 bits (195), Expect(3) = 4e-046
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -3
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 312 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 145
Score = 82.6 bits (174), Expect(3) = 4e-046
Identities = 39/75 (52%), Positives = 44/75 (58%)
Frame = +2 / -3
Query: 797 QSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
QSSP PM M+ +E P W PSV S GAVT TS M + MWKNL SS+IP
Sbjct: 723 QSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIP 544
Query: 977 ATVALIT*NSTSVLG 1021
T L T*+STS LG
Sbjct: 543 DTSPLFT*SSTSELG 499
Score = 52.8 bits (109), Expect(4) = 8e-068
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +2
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 314 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 466
Score = 51.0 bits (105), Expect(3) = 4e-046
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 453 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 322
Score = 35.0 bits (70), Expect(4) = 8e-068
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 5 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 91
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 164 bits (352), Expect(3) = 3e-067
Identities = 65/118 (55%), Positives = 86/118 (72%)
Frame = -2 / -3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 354 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 175
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYK 700
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS+G LGRYK
Sbjct: 174 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYK 1
Score = 116 bits (248), Expect(3) = 2e-049
Identities = 55/105 (52%), Positives = 62/105 (59%)
Frame = +2 / +2
Query: 707 RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSA 886
RPR P LMP PGP V T + PGP+E QSSP PM M+ +E P W PSV S
Sbjct: 8 RPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSP 187
Query: 887 GAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
GAVT TS M + MWKNL SS+IP T L T*+STS LG
Sbjct: 188 GAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELG 322
Score = 80.3 bits (169), Expect(3) = 3e-067
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2 / -3
Query: 1332 KTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
K D TKAVQ+A TSAC TG T++IPKG+YLVGPLNFTGP KG
Sbjct: 639 KKDSTKAVQEA*TSACGGTGKQTILIPKGEYLVGPLNFTGPSKG 508
Score = 69.3 bits (145), Expect(3) = 2e-049
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = +2 / +2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVL 1333
PL GPVKL GPTR SPLG+ V PV HADVHAS TAFV S L
Sbjct: 509 PLLGPVKLSGPTRYSPLGMRIVCFPVPPHADVHASCTAFVLSFL 640
Score = 52.8 bits (109), Expect(3) = 3e-067
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 507 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 355
Score = 51.0 bits (105), Expect(3) = 2e-049
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 368 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 499
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 157 bits (337), Expect(2) = 3e-067
Identities = 59/95 (62%), Positives = 76/95 (80%)
Frame = -2 / +3
Query: 789 IGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDA 610
IGPG V + +TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA
Sbjct: 3 IGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDA 182
Query: 609 ESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
SVLTAS + +ENI+ME+ +NPI+ID +CP K+C
Sbjct: 183 ASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 287
Score = 121 bits (258), Expect(2) = 3e-067
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +3
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 294 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 473
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 474 NAKGSATGCLKELA 515
Score = 107 bits (229), Expect(2) = 3e-043
Identities = 53/91 (58%), Positives = 63/91 (69%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 274 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 95
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPI 790
SL RPR P LMP PGP V T + PGP+
Sbjct: 94 SLYRPRLPMLMPWPGPHVTPVMFTLVVPGPM 2
Score = 92.7 bits (196), Expect(2) = 8e-024
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = -1 / +2
Query: 757 QHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHL 578
+ H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L
Sbjct: 35 RRHMRPRPWHQHRQPGAVQGREGRHGHQREGLYAKEDEQRPPDQGVRGRRLRAHRLQDPL 214
Query: 577 REHQDGGGGQPHRHRPVLLP 518
EHQDGG +PH HR +LP
Sbjct: 215 *EHQDGGLVEPHYHRHEVLP 274
Score = 90.4 bits (191), Expect(2) = 3e-043
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -1
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 547 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 368
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 367 ASGLAEVPVTFLKETSLTVTLE 302
Score = 67.0 bits (140), Expect(2) = 4e-021
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1 / -3
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A V +D+ GDA+A + AEQ V
Sbjct: 512 ELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVL 333
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 332 EGDVLDGDLGGAA 294
Score = 56.5 bits (117), Expect(2) = 4e-021
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L V H
Sbjct: 287 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLL*RTVLH 120
Score = 43.2 bits (88), Expect(2) = 8e-024
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +1
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
+T A+TT+PWP A TPRA P+ ASR
Sbjct: 433 NTVAKTTRPWPYAKTPRAAPQAASR 507
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 125 bits (267), Expect(3) = 6e-067
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = -2 / -3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 280 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 101
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPG 778
NTDG+H+G SS ++I N+ IG GDDC+SIGPG
Sbjct: 100 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 5
Score = 117 bits (251), Expect(3) = 6e-067
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / -3
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 604 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 434
Score = 94.1 bits (199), Expect(3) = 2e-049
Identities = 43/81 (53%), Positives = 49/81 (60%)
Frame = +2 / +3
Query: 779 PGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLE 958
PGP+E QSSP PM M+ +E P W PSV S GAVT TS M + MWKNL
Sbjct: 6 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 185
Query: 959 LSSLIPATVALIT*NSTSVLG 1021
SS+IP T L T*+STS LG
Sbjct: 186 FSSVIPDTSPLFT*SSTSELG 248
Score = 92.3 bits (195), Expect(3) = 2e-049
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / +3
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 435 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 602
Score = 52.8 bits (109), Expect(3) = 6e-067
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 433 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 281
Score = 51.0 bits (105), Expect(3) = 2e-049
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 294 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 425
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 211 bits (455), Expect(2) = 7e-067
Identities = 80/124 (64%), Positives = 99/124 (79%)
Frame = -2 / -1
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G SSK++I +TIG GDDC+SIGPG G+ V +TCGPG GISVG LGRYKDEKD
Sbjct: 479 DGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKD 300
Query: 687 VSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKV 508
V+DI V++C LK T+NGVRIKSY DA V+TAS L +ENI M++VANPI+ID +CP K+
Sbjct: 299 VTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKI 120
Query: 507 CPGK 496
C K
Sbjct: 119 CTAK 108
Score = 152 bits (326), Expect(2) = 3e-046
Identities = 72/116 (62%), Positives = 83/116 (71%)
Frame = +2 / +1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MGLATSS+ MFS EAV T +AS+ DL+RTPL+VFLS Q T+MS+TSFS
Sbjct: 130 GQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFS 309
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
SL PR PTLMP PGPQV T P+ PGP+E QSSP PMV M+ LEE P W P
Sbjct: 310 SLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 477
Score = 65.7 bits (137), Expect(2) = 7e-067
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -2 / -1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPC 385
S V+VKDVTF+NITGTSSTPEA+SLLCS+ PC
Sbjct: 101 SKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPC 3
Score = 56.1 bits (116), Expect(2) = 3e-046
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +2 / +1
Query: 383 LHGCVSEQSRLMASGVDDVPVMLRNVTSLTETCEELL 493
L G +SEQSRL ASGVD+VPVM NVTSLT T E L
Sbjct: 1 LQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPL 111
>gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164002, DNA
sequence
Length = 608
Score = 206 bits (444), Expect(2) = 3e-066
Identities = 76/149 (51%), Positives = 105/149 (70%)
Frame = -2 / +2
Query: 951 FFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCN 772
FFH+NI S+++ + V V AP + NTDG+H+G S ++I +TIG GDDC+SIGPG
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 771 GVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTA 592
+ +D + CGPG GISVG LGRYKDEKDV D+ V+ C L TTNG+RIKSY D++S
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 591 SHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ +E++ M+ V+ PI+IDQ +CP +C
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNIC 448
Score = 138 bits (295), Expect(2) = 4e-037
Identities = 69/145 (47%), Positives = 79/145 (54%)
Frame = +2 / -3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSM +G T S++ S + D S+YDLMR PLVV S Q T S TSFS
Sbjct: 435 GQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSSTSFS 256
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL PR PTLMP PGP + S + L PGP+E QSSP PMV M+ E P W PSV
Sbjct: 255 SLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESPMWIPSVLG 76
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKN 952
GA T T ML WKN
Sbjct: 75 LFPGAFTVTLSINTFLLAKMLRWKN 1
Score = 68.9 bits (144), Expect(2) = 3e-066
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEY 349
RS +S V+V DV F+NI GTS+TPEAI+L C++ PC GV L +V+++Y
Sbjct: 452 RSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKY 598
Score = 39.6 bits (80), Expect(2) = 4e-037
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2 / -3
Query: 377 TPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTETCE 484
TP HG +S Q +MASGV +VP M TS+T T +
Sbjct: 570 TPWHGRLSAQLSVMASGVLEVPWMFLKTTSVTATLD 463
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 152 bits (327), Expect(2) = 7e-066
Identities = 57/93 (61%), Positives = 74/93 (79%)
Frame = -2 / +1
Query: 783 PGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAES 604
PG V + +TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA S
Sbjct: 1 PGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAAS 180
Query: 603 VLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
VLTAS + +ENI+ME+ +NPI+ID +CP K+C
Sbjct: 181 VLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 279
Score = 121 bits (258), Expect(2) = 7e-066
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +1
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 286 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 465
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 466 NAKGSATGCLKELA 507
Score = 102 bits (218), Expect(2) = 8e-042
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 266 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 87
Query: 698 SL*RPRQPTLMPCPGPQV 751
SL RPR P LMP PGP V
Sbjct: 86 SLYRPRLPMLMPWPGPHV 33
Score = 93.2 bits (197), Expect(2) = 6e-024
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = -1 / +3
Query: 757 QHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHL 578
+ H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L
Sbjct: 27 RRHMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 206
Query: 577 REHQDGGGGQPHRHRPVLLP 518
EHQDGG +PH HR +LP
Sbjct: 207 *EHQDGGLVEPHYHRHEVLP 266
Score = 90.4 bits (191), Expect(2) = 8e-042
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -2
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 539 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 360
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 359 ASGLAEVPVTFLKETSLTVTLE 294
Score = 65.2 bits (136), Expect(2) = 2e-021
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +1 / -1
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A V +D+ GDA+A + A+Q V
Sbjct: 504 ELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAKQADGLGAGGGAGDVL 325
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 324 EGDVLDGDLGGAA 286
Score = 59.3 bits (123), Expect(2) = 2e-021
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -1
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 279 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 112
Score = 43.2 bits (88), Expect(2) = 6e-024
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +2
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
+T A+TT+PWP A TPRA P+ ASR
Sbjct: 425 NTVAKTTRPWPYAKTPRAAPQAASR 499
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 116 bits (248), Expect(4) = 2e-065
Identities = 47/89 (52%), Positives = 65/89 (73%)
Frame = -2 / +1
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 433 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 612
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSI 787
NTDG+H+G SS ++I N+ IG GDDC+SI
Sbjct: 613 NTDGIHMGDSSGVTIENTVIGVGDDCISI 699
Score = 111 bits (236), Expect(4) = 2e-065
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++ PKGDYLV PLNFTGPCKG
Sbjct: 109 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILTPKGDYLV*PLNFTGPCKG 279
Score = 89.5 bits (189), Expect(3) = 6e-046
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL G TR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 278 PLHGPVKLSGQTR*SPLGVRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 111
Score = 84.9 bits (179), Expect(3) = 6e-046
Identities = 40/78 (51%), Positives = 46/78 (58%)
Frame = +2 / -2
Query: 788 IETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSS 967
+E QSSP PM M+ +E P W PSV S GAVT TS M + MWKNL SS
Sbjct: 698 MEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSS 519
Query: 968 LIPATVALIT*NSTSVLG 1021
+IP T L T*+STS LG
Sbjct: 518 VIPDTSPLFT*SSTSELG 465
Score = 52.8 bits (109), Expect(4) = 2e-065
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +1
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 280 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 432
Score = 51.0 bits (105), Expect(3) = 6e-046
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 419 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 288
Score = 29.0 bits (57), Expect(4) = 2e-065
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 1494 NALRVFFILAVVCAVCTAK 1438
NA+R FF+LA VCA K
Sbjct: 1 NAMRAFFLLAFVCAAHAGK 57
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 224 bits (483), Expect(2) = 2e-065
Identities = 89/135 (65%), Positives = 107/135 (79%)
Frame = -2 / -3
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
TLVL NATV+GI LLNSKFFH+N+ + +T+KDV VTAP D NTDG+H+G SSK+
Sbjct: 405 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 226
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
+I +TIG GDDC+SIGPG G+ V +TCGPG GISVG LGRYKDEKDV+DI V++C L
Sbjct: 225 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 46
Query: 654 KNTTNGVRIKSYVDA 610
K T+NGVRIKSY DA
Sbjct: 45 KKTSNGVRIKSYEDA 1
Score = 170 bits (365), Expect(2) = 9e-046
Identities = 80/135 (59%), Positives = 93/135 (68%)
Frame = +2 / +2
Query: 611 ASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPI 790
AS+ DL+RTPL+VFLS Q T+MS+TSFSSL PR PTLMP PGPQV T P+ PGP+
Sbjct: 2 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 181
Query: 791 ETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSL 970
E QSSP PMV M+ LEE P W PSV S GAVT TS V + MWKNLE S +
Sbjct: 182 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 361
Query: 971 IPATVALIT*NSTSV 1015
IP TVAL+ +ST+V
Sbjct: 362 IPETVALLQKSSTNV 406
Score = 51.5 bits (106), Expect(2) = 2e-065
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -2 / -3
Query: 1143 YTASWIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
Y +WIE+ HV+N+ I+G GTLDGQG V+ +K
Sbjct: 660 YKTNWIEIEHVDNLVISGKGTLDGQGKQVWDNNK 559
Score = 39.6 bits (80), Expect(2) = 9e-046
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2 / +2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRS 1156
T +PWPS VP P++ L T SIQL +Y RS
Sbjct: 575 TCLPWPSRVPLPLMTRLSTCSISIQLVLYALRS 673
>gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f006k08, DNA
sequence
Length = 735
Score = 105 bits (224), Expect(5) = 2e-062
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +2 / +3
Query: 1016 LGIAFTLSVXXXXXTAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAM 1195
LGIAFT+ V TAVPWPSSVPEPV+ ML T DNSIQLA+YL+RS DPSRLPSSWM M
Sbjct: 156 LGIAFTVPVLAFL*TAVPWPSSVPEPVMTMLSTCDNSIQLALYLARSLDPSRLPSSWMVM 335
Score = 93.2 bits (197), Expect(5) = 2e-064
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -2 / -3
Query: 1320 TKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGS 1198
++AVQDAWTSAC ATGSATV+IPKGDYLVGPLNF GPCKG+
Sbjct: 457 SQAVQDAWTSACRATGSATVLIPKGDYLVGPLNFVGPCKGA 335
Score = 91.3 bits (193), Expect(5) = 2e-064
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = -2 / -3
Query: 1194 IAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVKAMPN 1015
I IQ KY ASWIELSHV+NI +TGSGTLDGQGTAVY K+KT VKAMPN
Sbjct: 334 ITIQLDGNLLGSNDLAKYKASWIELSHVDNIVMTGSGTLDGQGTAVYKKAKTGTVKAMPN 155
Query: 1014 TLVLFHVI 991
+ +I
Sbjct: 154 VRAMLTLI 131
Score = 86.3 bits (182), Expect(5) = 2e-045
Identities = 37/49 (75%), Positives = 38/49 (77%)
Frame = -3 / -1
Query: 1199 ATSPSSWMATCWDQTTWTSTRRAGSNCLTLTTSGSPARARWTARGPPFI 1053
A SPSS MATCWD TTW STRRAGS+C T TTS ARAR TAR PPFI
Sbjct: 339 APSPSSSMATCWDPTTWPSTRRAGSSCRTSTTSS*LARARSTARAPPFI 193
Score = 81.3 bits (171), Expect(4) = 3e-034
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -1 / -2
Query: 1198 QHRHPAGWQPAGIKRPGQVHGELDRIVSR*QHRDHRLGHAGRP 1070
+H HPA WQPAGI+RPGQV GELDR+V+R QHR LGHA RP
Sbjct: 338 RHHHPARWQPAGIQRPGQVQGELDRVVARRQHRHDWLGHARRP 210
Score = 79.9 bits (168), Expect(5) = 2e-062
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2 / +3
Query: 1193 MLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTA 1315
++ PLHGP KLRGPTR*SPLG++TVALPVA HADVHAS TA
Sbjct: 330 VMAPLHGPTKLRGPTR*SPLGMSTVALPVALHADVHAS*TA 452
Score = 78.0 bits (164), Expect(5) = 7e-048
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = +1 / +2
Query: 1015 VGHRLHVVGLALAINGGPLAVQRARAGDPDVVNVRQFDPARRXXXXXXXXXXXAIQLDGD 1194
VGHRLH G L INGG LAV+RARA DVV+VRQ DPAR AI+LDGD
Sbjct: 155 VGHRLHSAGFGLFINGGALAVERARASHDDVVDVRQLDPARLVLGQVVGSQQVAIELDGD 334
Query: 1195 VA 1200
A
Sbjct: 335 GA 340
Score = 68.4 bits (143), Expect(5) = 7e-048
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1 / +2
Query: 1201 ALAWPSEVERADQVVALGDHHRGASGRFAR*RPRVLDCL 1317
ALA +EVERADQ+VALGD HRGASGR AR*RPRVL+ L
Sbjct: 338 ALARANEVERADQIVALGDEHRGASGRSAR*RPRVLNRL 454
Score = 58.8 bits (122), Expect(5) = 2e-064
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -2 / -2
Query: 1506 ASAHNALRVFFILAVVCAVCTAKRTGA 1426
ASA NALRVFFILA++CAVCTAKRTGA
Sbjct: 734 ASASNALRVFFILAILCAVCTAKRTGA 654
Score = 53.8 bits (111), Expect(4) = 3e-034
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1 / -2
Query: 1273 KRHGGDPQGRLPGRPSQLHWAMQGQQH 1193
KRHG PQGRL GRPSQL W +QG+ H
Sbjct: 410 KRHGAHPQGRLSGRPSQLRWPVQGRHH 330
Score = 53.8 bits (111), Expect(5) = 2e-045
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3 / -1
Query: 1283 KRPEAPRW*SPRATTWSALSTSLGHARAATSPSS 1182
+RPEAPR SPRAT WSALSTSL ARA + SS
Sbjct: 420 ERPEAPRCSSPRATIWSALSTSLARARAPSPSSS 319
Score = 52.4 bits (108), Expect(5) = 2e-045
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 1507 GFRTQRSPGVFHPSRGMCRMHSEKDRSQQGRIG 1409
GFR Q S GV HPS M MHSEKDRS+ GR+G
Sbjct: 735 GFRKQCSQGVLHPSDPMRGMHSEKDRSKDGRLG 637
Score = 48.7 bits (100), Expect(5) = 2e-062
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 1389 QRHRGLPPILPCWLLSFSLCIRHIPRLG*KTPGERCVRK 1505
Q+ + L P LP L SFSLCI I LG*+TP E C+RK
Sbjct: 617 QKQQSLLPSLPSLLRSFSLCIPRIGSLG*RTP*EHCLRK 733
Score = 48.3 bits (99), Expect(5) = 2e-062
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 1315 LCAVRLAVAGRAELGDVERPAAASSS 1392
LC VRLAVA RAELGDVERPA + SS
Sbjct: 549 LCGVRLAVARRAELGDVERPAGSRSS 626
Score = 47.8 bits (98), Expect(5) = 7e-048
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +2 / +1
Query: 1433 VLFAVHTAHTTARMKNTRRALCAEA 1507
VLFAVHTAH ARMKNT RAL AEA
Sbjct: 661 VLFAVHTAHRIARMKNTLRALLAEA 735
Score = 45.1 bits (92), Expect(5) = 2e-064
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 1363 HLQARRDQRRQDGLHKGSP 1307
HLQARRD RRQDGLHKG P
Sbjct: 597 HLQARRDGRRQDGLHKGKP 541
Score = 44.6 bits (91), Expect(4) = 3e-034
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = -3 / -3
Query: 1505 LPHTTLSGCFSS*PWYVPYAQRKGQEPTRKNRRQ 1404
LP LSGC SS* Y YAQRKG E R+ R+Q
Sbjct: 733 LPQAMLSGCSSS*RSYARYAQRKGPEQRRETRQQ 632
Score = 43.2 bits (88), Expect(5) = 7e-048
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 1307 WTAFVQSVLPSLVAPSLEMSNV 1372
W FV+SVLPS VAPSLEMSNV
Sbjct: 541 WFTFVESVLPSPVAPSLEMSNV 606
Score = 42.3 bits (86), Expect(5) = 2e-045
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2 / -2
Query: 1371 TFDISKLGATSDGKTDCTK 1315
TFDISKLGAT DGKTD TK
Sbjct: 605 TFDISKLGATGDGKTDSTK 549
Score = 35.4 bits (71), Expect(5) = 2e-064
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 1013 HWCCFT*STPLSPESNY 963
HWCC T* T LS ESNY
Sbjct: 51 HWCCST*PTALSLESNY 1
Score = 34.5 bits (69), Expect(5) = 2e-062
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 964 *FDSGDSGVDHVKQHQCV 1017
*FDS DS V HV+QHQC+
Sbjct: 2 *FDSRDSAVGHVEQHQCL 55
Score = 31.8 bits (63), Expect(5) = 2e-045
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / -3
Query: 1014 TLVLFHVINATVAGIKL 964
TLVLF+V N TV+GIKL
Sbjct: 52 TLVLFYVTNGTVSGIKL 2
Score = 30.9 bits (61), Expect(4) = 3e-034
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 1009 GAVSRDQRHCRRNQT 965
GAV RDQRHC NQT
Sbjct: 47 GAVLRDQRHCLWNQT 3
Score = 29.9 bits (59), Expect(5) = 7e-048
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 965 SLIPATVALIT*NSTSV 1015
SLIP TV L+T*NST+V
Sbjct: 3 SLIPETVPLVT*NSTNV 53
>gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 728
Score = 166 bits (357), Expect(3) = 3e-064
Identities = 61/116 (52%), Positives = 82/116 (70%)
Frame = -2 / -2
Query: 852 GGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDIT 673
G S ++I +TIG GDDC+SIGPG + +D + CGPG GISVG LGRYKDEKDV D+
Sbjct: 676 GDSENVTISGTTIGVGDDCISIGPGSKTIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVK 497
Query: 672 VRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
V+ C L TTNG+RIKSY D++S + +E++ M+ V+ PI+IDQ +CP +C
Sbjct: 496 VKGCTLVGTTNGLRIKSYEDSKSSPKVTKFVYEDVTMDNVSYPIIIDQKYCPNNIC 329
Score = 113 bits (242), Expect(2) = 2e-036
Identities = 56/112 (50%), Positives = 66/112 (58%)
Frame = +2 / +3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ +WSM +G T S++ S + D S+YDLMR PLVV S Q T S TSFS
Sbjct: 342 GQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSSTSFS 521
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPP 853
SL PR PTLMP PGP + S + L PGP+E QSSP PMV M+ E P
Sbjct: 522 SLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESP 677
Score = 96.8 bits (205), Expect(3) = 3e-064
Identities = 41/75 (54%), Positives = 54/75 (72%)
Frame = -2 / -2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
RS +S V+V DV F+NI GTS+TPEAI+L C++ PC GV L +V+++Y NNKTMAVC
Sbjct: 325 RSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKYNKSNNKTMAVC 146
Query: 315 SNAKGTAKGSIEALA 271
NA G + G + LA
Sbjct: 145 KNAVGKSFGLSKELA 101
Score = 61.6 bits (128), Expect(2) = 2e-036
Identities = 35/86 (40%), Positives = 46/86 (53%)
Frame = +2 / +3
Query: 227 HACMQKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQ 406
+ CM+ + + AS+ P +P A LQTAMVLL Y T TP HG +S Q
Sbjct: 57 YICMRVGCGSELQMHASSFDKPKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQ 236
Query: 407 SRLMASGVDDVPVMLRNVTSLTETCE 484
+MASGV +VP M TS+T T +
Sbjct: 237 LSVMASGVLEVPWMFLKTTSVTATLD 314
Score = 24.0 bits (46), Expect(3) = 3e-064
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 888 PADVENTDGVHVG 850
P + NTDG+H+G
Sbjct: 711 PGNSPNTDGIHMG 673
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 117 bits (251), Expect(4) = 3e-064
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +3
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 147 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 317
Score = 99.1 bits (210), Expect(4) = 3e-064
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = -2 / +3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 471 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 650
Query: 873 NTDGVHVGGSSKISILNSTIG 811
NTDG+H+G SS ++I N+ IG
Sbjct: 651 NTDGIHMGDSSGVTIENTVIG 713
Score = 92.3 bits (195), Expect(3) = 2e-043
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 316 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 149
Score = 73.5 bits (154), Expect(3) = 2e-043
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +2 / -2
Query: 812 PMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVAL 991
PM M+ +E P W PSV S GAVT TS M + MWKNL SS+IP T L
Sbjct: 712 PMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPL 533
Query: 992 IT*NSTSVLG 1021
T*+STS LG
Sbjct: 532 FT*SSTSELG 503
Score = 52.8 bits (109), Expect(4) = 3e-064
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +3
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 318 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 470
Score = 51.0 bits (105), Expect(3) = 2e-043
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 457 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 326
Score = 35.4 bits (71), Expect(4) = 3e-064
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2 / +3
Query: 1530 RRPQEGEMASAHNALRVFFILAVVCAVCTAK 1438
+ P++ +MA NA+R FF+LA VCA K
Sbjct: 3 KSPRQIKMACTGNAMRAFFLLAFVCAAHAGK 95
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 117 bits (251), Expect(4) = 3e-064
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 145 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 315
Score = 99.1 bits (210), Expect(4) = 3e-064
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = -2 / +1
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 469 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 648
Query: 873 NTDGVHVGGSSKISILNSTIG 811
NTDG+H+G SS ++I N+ IG
Sbjct: 649 NTDGIHMGDSSGVTIENTVIG 711
Score = 92.3 bits (195), Expect(3) = 1e-043
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 314 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 147
Score = 73.5 bits (154), Expect(3) = 1e-043
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +2 / -2
Query: 812 PMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVAL 991
PM M+ +E P W PSV S GAVT TS M + MWKNL SS+IP T L
Sbjct: 710 PMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPL 531
Query: 992 IT*NSTSVLG 1021
T*+STS LG
Sbjct: 530 FT*SSTSELG 501
Score = 52.8 bits (109), Expect(4) = 3e-064
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +1
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 316 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGRLDGQGPAVWSKN 468
Score = 51.9 bits (107), Expect(3) = 1e-043
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = +2 / -2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS+P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 455 TAGPCPSSLPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 324
Score = 35.4 bits (71), Expect(4) = 3e-064
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2 / +1
Query: 1530 RRPQEGEMASAHNALRVFFILAVVCAVCTAK 1438
+ P++ +MA NA+R FF+LA VCA K
Sbjct: 1 KSPRQIKMACTGNAMRAFFLLAFVCAAHAGK 93
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 117 bits (251), Expect(4) = 4e-064
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
+FDISKLGA+ DGK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 151 SFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 321
Score = 99.1 bits (210), Expect(4) = 4e-064
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = -2 / +1
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 475 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 654
Query: 873 NTDGVHVGGSSKISILNSTIG 811
NTDG+H+G SS ++I N+ IG
Sbjct: 655 NTDGIHMGDSSGVTIENTVIG 717
Score = 92.3 bits (195), Expect(3) = 2e-043
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LPS AP+L MSN
Sbjct: 320 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSN 153
Score = 73.5 bits (154), Expect(3) = 2e-043
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +2 / -1
Query: 812 PMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVAL 991
PM M+ +E P W PSV S GAVT TS M + MWKNL SS+IP T L
Sbjct: 716 PMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPL 537
Query: 992 IT*NSTSVLG 1021
T*+STS LG
Sbjct: 536 FT*SSTSELG 507
Score = 52.8 bits (109), Expect(4) = 4e-064
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +1
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 322 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 474
Score = 51.0 bits (105), Expect(3) = 2e-043
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 461 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 330
Score = 35.0 bits (70), Expect(4) = 4e-064
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +1
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 13 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 99
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 670
Score = 146 bits (314), Expect(2) = 4e-064
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = -2 / +2
Query: 753 ITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFE 574
+TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA SVLTAS + +E
Sbjct: 8 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 187
Query: 573 NIRMEEVANPIVIDQYFCPQKVC 505
NI+ME+ +NPI+ID +CP K+C
Sbjct: 188 NIKMEDSSNPIIIDMKYCPNKIC 256
Score = 121 bits (258), Expect(2) = 4e-064
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +2
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 263 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 442
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 443 NAKGSATGCLKELA 484
Score = 102 bits (218), Expect(2) = 8e-042
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 243 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 64
Query: 698 SL*RPRQPTLMPCPGPQV 751
SL RPR P LMP PGP V
Sbjct: 63 SLYRPRLPMLMPWPGPHV 10
Score = 93.2 bits (197), Expect(2) = 6e-024
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = -1 / +1
Query: 757 QHHLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHL 578
+ H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L
Sbjct: 4 RRHMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 183
Query: 577 REHQDGGGGQPHRHRPVLLP 518
EHQDGG +PH HR +LP
Sbjct: 184 *EHQDGGLVEPHYHRHEVLP 243
Score = 90.4 bits (191), Expect(2) = 8e-042
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -2
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 516 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 337
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 336 ASGLAEVPVTFLKETSLTVTLE 271
Score = 67.0 bits (140), Expect(2) = 7e-022
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1 / -1
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A V +D+ GDA+A + AEQ V
Sbjct: 481 ELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVL 302
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 301 EGDVLDGDLGGAA 263
Score = 59.3 bits (123), Expect(2) = 7e-022
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -1
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 256 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 89
Score = 43.2 bits (88), Expect(2) = 6e-024
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +3
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
+T A+TT+PWP A TPRA P+ ASR
Sbjct: 402 NTVAKTTRPWPYAKTPRAAPQAASR 476
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 146 bits (314), Expect(2) = 4e-064
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = -2 / +3
Query: 753 ITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFE 574
+TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA SVLTAS + +E
Sbjct: 3 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 182
Query: 573 NIRMEEVANPIVIDQYFCPQKVC 505
NI+ME+ +NPI+ID +CP K+C
Sbjct: 183 NIKMEDSSNPIIIDMKYCPNKIC 251
Score = 121 bits (258), Expect(2) = 4e-064
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +3
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 258 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 437
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 438 NAKGSATGCLKELA 479
Score = 102 bits (218), Expect(2) = 8e-042
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = +2 / -3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 238 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 59
Query: 698 SL*RPRQPTLMPCPGPQV 751
SL RPR P LMP PGP V
Sbjct: 58 SLYRPRLPMLMPWPGPHV 5
Score = 92.7 bits (196), Expect(2) = 8e-024
Identities = 42/78 (53%), Positives = 48/78 (61%)
Frame = -1 / +2
Query: 751 HLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHLRE 572
H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L E
Sbjct: 5 HMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*E 184
Query: 571 HQDGGGGQPHRHRPVLLP 518
HQDGG +PH HR +LP
Sbjct: 185 HQDGGLVEPHYHRHEVLP 238
Score = 90.4 bits (191), Expect(2) = 8e-042
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -3
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 511 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 332
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 331 ASGLAEVPVTFLKETSLTVTLE 266
Score = 67.0 bits (140), Expect(2) = 7e-022
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1 / -2
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A V +D+ GDA+A + AEQ V
Sbjct: 476 ELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVL 297
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 296 EGDVLDGDLGGAA 258
Score = 59.3 bits (123), Expect(2) = 7e-022
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -2
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 251 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 84
Score = 43.2 bits (88), Expect(2) = 8e-024
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +1
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
+T A+TT+PWP A TPRA P+ ASR
Sbjct: 397 NTVAKTTRPWPYAKTPRAAPQAASR 471
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 145 bits (311), Expect(2) = 1e-063
Identities = 54/82 (65%), Positives = 69/82 (84%)
Frame = -2 / +3
Query: 750 TCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFEN 571
TCGPG GIS+G LGRYKDEKDV+DI V++C LK T+NG+RIK+Y DA SVLTAS + +EN
Sbjct: 3 TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYEN 182
Query: 570 IRMEEVANPIVIDQYFCPQKVC 505
I+ME+ +NPI+ID +CP K+C
Sbjct: 183 IKMEDSSNPIIIDMKYCPNKIC 248
Score = 121 bits (258), Expect(2) = 1e-063
Identities = 47/74 (63%), Positives = 64/74 (86%)
Frame = -2 / +3
Query: 492 SNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 313
S +S V+VKDV+F+N+TGTS++PEA+SLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 255 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 434
Query: 312 NAKGTAKGSIEALA 271
NAKG+A G ++ LA
Sbjct: 435 NAKGSATGCLKELA 476
Score = 102 bits (218), Expect(2) = 8e-042
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = +2 / -1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM MG SSILMFS EAVST++AS+Y L+R PL+VF S Q T+MS+TSFS
Sbjct: 235 GQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFS 56
Query: 698 SL*RPRQPTLMPCPGPQV 751
SL RPR P LMP PGP V
Sbjct: 55 SLYRPRLPMLMPWPGPHV 2
Score = 92.7 bits (196), Expect(2) = 9e-024
Identities = 42/78 (53%), Positives = 48/78 (61%)
Frame = -1 / +2
Query: 751 HLRPRAGHQRRLPRPLQGREGRERHHGAELRAQEHHQRRAHQVVRGRRVRADGLPSHLRE 572
H+RPR HQ R P +QGREGR H L A+E QR Q VRGRR+RA L L E
Sbjct: 2 HMRPRPWHQHRQPGAVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*E 181
Query: 571 HQDGGGGQPHRHRPVLLP 518
HQDGG +PH HR +LP
Sbjct: 182 HQDGGLVEPHYHRHEVLP 235
Score = 90.4 bits (191), Expect(2) = 8e-042
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +2 / -1
Query: 239 QKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLM 418
+++G + + AS+ P+A+PLA TAMVLLFLP YSTLT TP+ G +SEQSRL
Sbjct: 508 ERDGWMEV*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLT 329
Query: 419 ASGVDDVPVMLRNVTSLTETCE 484
ASG+ +VPV TSLT T E
Sbjct: 328 ASGLAEVPVTFLKETSLTVTLE 263
Score = 67.0 bits (140), Expect(2) = 7e-022
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1 / -3
Query: 274 QCLDASLGGALGVAADGHGFVVLAGVLHVDIDEGDAAAWLRLRAEQXXXXXXXXXXXXVA 453
+ L+A+ G ALGV A GHG VV A V +D+ GDA+A + AEQ V
Sbjct: 473 ELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQADGLGAGGGAGDVL 294
Query: 454 ERDVLDGDMRGVA 492
E DVLDGD+ G A
Sbjct: 293 EGDVLDGDLGGAA 255
Score = 59.3 bits (123), Expect(2) = 7e-022
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHGLGVHVRLDAHAVGGVLEHAVPH 672
A +RA + VDD+GV +LH DVL ++GG +HG GV VRLD AV +L+ V H
Sbjct: 248 ADFVRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQRTVLH 81
Score = 43.2 bits (88), Expect(2) = 9e-024
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +1
Query: 353 STPARTTKPWPSAATPRAPPREASR 279
+T A+TT+PWP A TPRA P+ ASR
Sbjct: 394 NTVAKTTRPWPYAKTPRAAPQAASR 468
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 213 bits (459), Expect(2) = 1e-063
Identities = 84/147 (57%), Positives = 111/147 (75%)
Frame = -2 / -3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVE 874
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+ + + +KDV VTAP D
Sbjct: 441 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 262
Query: 873 NTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDE 694
NTDG+H+G SS ++I N+ IG GDDC+SIGPG V + +TCGPG GIS+G LGRYKDE
Sbjct: 261 NTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDE 82
Query: 693 KDVSDITVRNCVLKNTTNGVRIKSYVD 613
KDV+DI V++C LK T+NG+RIK+Y D
Sbjct: 81 KDVTDINVKDCTLKKTSNGLRIKAYED 1
Score = 155 bits (332), Expect(2) = 1e-045
Identities = 74/136 (54%), Positives = 86/136 (63%)
Frame = +2 / +2
Query: 614 STYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIE 793
S+Y L+R PL+VF S Q T+MS+TSFSSL RPR P LMP PGP V T + PGP+E
Sbjct: 2 SSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 181
Query: 794 TQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLI 973
QSSP PM M+ +E P W PSV S GAVT TS M + MWKNL SS+I
Sbjct: 182 MQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVI 361
Query: 974 PATVALIT*NSTSVLG 1021
P T L T*+STS LG
Sbjct: 362 PDTSPLFT*SSTSELG 409
Score = 52.8 bits (109), Expect(2) = 1e-063
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 594 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 442
Score = 51.0 bits (105), Expect(2) = 1e-045
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 455 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 586
>gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462903, DNA
sequence
Length = 656
Score = 105 bits (224), Expect(4) = 1e-061
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +2 / +3
Query: 1016 LGIAFTLSVXXXXXTAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAM 1195
LGIAFT+ V TAVPWPSSVPEPV+ ML T DNSIQLA+YL+RS DPSRLPSSWM M
Sbjct: 51 LGIAFTVPVLAFL*TAVPWPSSVPEPVMTMLSTCDNSIQLALYLARSLDPSRLPSSWMVM 230
Score = 93.2 bits (197), Expect(4) = 3e-063
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -2 / -2
Query: 1320 TKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGS 1198
++AVQDAWTSAC ATGSATV+IPKGDYLVGPLNF GPCKG+
Sbjct: 352 SQAVQDAWTSACRATGSATVLIPKGDYLVGPLNFVGPCKGA 230
Score = 91.3 bits (193), Expect(4) = 3e-063
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = -2 / -2
Query: 1194 IAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVKAMPN 1015
I IQ KY ASWIELSHV+NI +TGSGTLDGQGTAVY K+KT VKAMPN
Sbjct: 229 ITIQLDGNLLGSNDLAKYKASWIELSHVDNIVMTGSGTLDGQGTAVYKKAKTGTVKAMPN 50
Query: 1014 TLVLFHVI 991
+ +I
Sbjct: 49 VRAMLTLI 26
Score = 86.3 bits (182), Expect(4) = 3e-044
Identities = 37/49 (75%), Positives = 38/49 (77%)
Frame = -3 / -3
Query: 1199 ATSPSSWMATCWDQTTWTSTRRAGSNCLTLTTSGSPARARWTARGPPFI 1053
A SPSS MATCWD TTW STRRAGS+C T TTS ARAR TAR PPFI
Sbjct: 234 APSPSSSMATCWDPTTWPSTRRAGSSCRTSTTSS*LARARSTARAPPFI 88
Score = 81.3 bits (171), Expect(3) = 2e-035
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -1 / -1
Query: 1198 QHRHPAGWQPAGIKRPGQVHGELDRIVSR*QHRDHRLGHAGRP 1070
+H HPA WQPAGI+RPGQV GELDR+V+R QHR LGHA RP
Sbjct: 233 RHHHPARWQPAGIQRPGQVQGELDRVVARRQHRHDWLGHARRP 105
Score = 79.9 bits (168), Expect(4) = 1e-061
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2 / +3
Query: 1193 MLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTA 1315
++ PLHGP KLRGPTR*SPLG++TVALPVA HADVHAS TA
Sbjct: 225 VMAPLHGPTKLRGPTR*SPLGMSTVALPVALHADVHAS*TA 347
Score = 78.0 bits (164), Expect(4) = 3e-047
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = +1 / +2
Query: 1015 VGHRLHVVGLALAINGGPLAVQRARAGDPDVVNVRQFDPARRXXXXXXXXXXXAIQLDGD 1194
VGHRLH G L INGG LAV+RARA DVV+VRQ DPAR AI+LDGD
Sbjct: 50 VGHRLHSAGFGLFINGGALAVERARASHDDVVDVRQLDPARLVLGQVVGSQQVAIELDGD 229
Query: 1195 VA 1200
A
Sbjct: 230 GA 235
Score = 72.1 bits (151), Expect(4) = 3e-063
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2 / -1
Query: 1527 RPQEGEMASAHNALRVFFILAVVCAVCTAKRTGA 1426
RP +GEMASA NALRVFFILA++CAVCTAKRTGA
Sbjct: 650 RPPQGEMASASNALRVFFILAILCAVCTAKRTGA 549
Score = 68.4 bits (143), Expect(4) = 3e-047
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1 / +2
Query: 1201 ALAWPSEVERADQVVALGDHHRGASGRFAR*RPRVLDCL 1317
ALA +EVERADQ+VALGD HRGASGR AR*RPRVL+ L
Sbjct: 233 ALARANEVERADQIVALGDEHRGASGRSAR*RPRVLNRL 349
Score = 62.9 bits (131), Expect(4) = 1e-061
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1 / +3
Query: 1381 ASSSATGGCRRFFLVGSCPFRCAYGTYHG*DEKHPESVVCGSHFSFLWP 1527
A S ++ C R + S PFRCAY *DE+HPES+ CGSHFS WP
Sbjct: 504 AGSRSSRVCCRVSRLCSGPFRCAYRA*DR*DEEHPESIACGSHFSLWWP 650
Score = 61.6 bits (128), Expect(4) = 3e-044
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -3 / -2
Query: 1526 GHRKEKWLPHTTLSGCFSS*PWYVPYAQRKGQEPTRKNRRQ 1404
GH +EKWLP LSGC SS* Y YAQRKG E R+ R+Q
Sbjct: 649 GHHREKWLPQAMLSGCSSS*RSYARYAQRKGPEQRRETRQQ 527
Score = 59.7 bits (124), Expect(3) = 2e-035
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -1 / -3
Query: 1525 ATGRRNGFRTQRSPGVFHPSRGMCRMHSEKDRSQQGRIG 1409
AT RNGFR Q S GV HPS M MHSEKDRS+ GR+G
Sbjct: 648 ATTGRNGFRKQCSQGVLHPSDPMRGMHSEKDRSKDGRLG 532
Score = 57.9 bits (120), Expect(4) = 3e-047
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = +3 / +2
Query: 1389 QRHRGLPPILPCWLLSFSLCIRHIPRLG*KTPGERCVRKPFLLPVA 1526
Q+ + L P LP L SFSLCI I LG*+TP E C+RKPFL VA
Sbjct: 512 QKQQSLLPSLPSLLRSFSLCIPRIGSLG*RTP*EHCLRKPFLPVVA 649
Score = 53.8 bits (111), Expect(3) = 2e-035
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1 / -1
Query: 1273 KRHGGDPQGRLPGRPSQLHWAMQGQQH 1193
KRHG PQGRL GRPSQL W +QG+ H
Sbjct: 305 KRHGAHPQGRLSGRPSQLRWPVQGRHH 225
Score = 53.8 bits (111), Expect(4) = 3e-044
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3 / -3
Query: 1283 KRPEAPRW*SPRATTWSALSTSLGHARAATSPSS 1182
+RPEAPR SPRAT WSALSTSL ARA + SS
Sbjct: 315 ERPEAPRCSSPRATIWSALSTSLARARAPSPSSS 214
Score = 48.3 bits (99), Expect(4) = 1e-061
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 1315 LCAVRLAVAGRAELGDVERPAAASSS 1392
LC VRLAVA RAELGDVERPA + SS
Sbjct: 444 LCGVRLAVARRAELGDVERPAGSRSS 521
Score = 45.1 bits (92), Expect(4) = 3e-063
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 1363 HLQARRDQRRQDGLHKGSP 1307
HLQARRD RRQDGLHKG P
Sbjct: 492 HLQARRDGRRQDGLHKGKP 436
Score = 43.2 bits (88), Expect(4) = 3e-047
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 1307 WTAFVQSVLPSLVAPSLEMSNV 1372
W FV+SVLPS VAPSLEMSNV
Sbjct: 436 WFTFVESVLPSPVAPSLEMSNV 501
Score = 42.3 bits (86), Expect(4) = 3e-044
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2 / -1
Query: 1371 TFDISKLGATSDGKTDCTK 1315
TFDISKLGAT DGKTD TK
Sbjct: 500 TFDISKLGATGDGKTDSTK 444
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 96.4 bits (204), Expect(6) = 4e-063
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = -2 / +3
Query: 1335 GKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
GK D TKAVQ+AWTSAC TG T++IPKGDYLVGPLNFTGPCKG
Sbjct: 183 GKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKG 317
Score = 79.9 bits (168), Expect(5) = 3e-045
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLP 1336
PLHGPVKL GPTR*SPLG+ V PV HADVHAS TAFV S LP
Sbjct: 316 PLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLP 182
Score = 78.5 bits (165), Expect(6) = 4e-063
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -2 / +2
Query: 945 HINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPG 778
H + + ++DV VTAP D NTDG+H+G SS ++I N+ IG GDDC+SIGPG
Sbjct: 581 HERVPVQGHVXLRDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 748
Score = 58.8 bits (122), Expect(5) = 3e-045
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +2 / -2
Query: 779 PGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTS 907
PGP+E QSSP PM M+ +E P W PSV S GAVT TS
Sbjct: 747 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 619
Score = 52.8 bits (109), Expect(6) = 4e-063
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2 / +3
Query: 1197 NIAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
++ IQ +Y +WIE+ V+N+ ITG G LDGQG AV+SK+
Sbjct: 318 DVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 470
Score = 51.5 bits (106), Expect(6) = 4e-063
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / +3
Query: 1053 SKSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINI 934
S +K + K +PN+LVL +V N V+GI LLN+KFFH+N+
Sbjct: 471 SCAKKYDCKILPNSLVLDYVTNGEVSGITLLNAKFFHMNV 590
Score = 51.0 bits (105), Expect(5) = 3e-045
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 1058 TAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWM 1189
TA P PSS P PVI L T SIQL +Y RS SRLPS+WM
Sbjct: 457 TAGPCPSSFPLPVITRLSTRRISIQLPLYWLRSVVASRLPSTWM 326
Score = 41.8 bits (85), Expect(5) = 3e-045
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 941 MWKNLELSSLIPATVALIT*NSTSVLG 1021
MWKNL SS+IP T L+T*+STS LG
Sbjct: 583 MWKNLAFSSVIPDTSPLVT*SSTSELG 503
Score = 35.0 bits (70), Expect(6) = 4e-063
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 1524 PQEGEMASAHNALRVFFILAVVCAVCTAK 1438
P++ +MA NA+R FF+LA VCA K
Sbjct: 6 PRQIKMACTGNAMRAFFLLAFVCAAHAGK 92
Score = 26.7 bits (52), Expect(5) = 3e-045
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 1333 AVAGRAELGDVERPA 1377
A AG A+L DVERPA
Sbjct: 182 AFAGGAQLADVERPA 138
Score = 22.6 bits (43), Expect(6) = 4e-063
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 1371 TFDISKLGATSD 1336
+FDISKLGA+ +
Sbjct: 144 SFDISKLGASGE 179
>gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 738
Score = 105 bits (223), Expect(4) = 1e-061
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +2 / -3
Query: 1016 LGIAFTLSVXXXXXTAVPWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAM 1195
LGIAFT+ V TAVPWPSSVPEPV+ ML T DNSIQLA+YL+RS DPSRLPSSWM M
Sbjct: 679 LGIAFTVPVWAFL*TAVPWPSSVPEPVMTMLSTCDNSIQLALYLARSLDPSRLPSSWMVM 500
Score = 93.2 bits (197), Expect(4) = 1e-062
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -2 / +3
Query: 1320 TKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGS 1198
++AVQDAWTSAC ATGSATV+IPKGDYLVGPLNF GPCKG+
Sbjct: 378 SQAVQDAWTSACRATGSATVLIPKGDYLVGPLNFVGPCKGA 500
Score = 89.5 bits (189), Expect(4) = 1e-062
Identities = 39/68 (57%), Positives = 45/68 (66%)
Frame = -2 / +3
Query: 1194 IAIQXXXXXXXXXXXDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVKAMPN 1015
I IQ KY ASWIELSHV+NI +TGSGTLDGQGTAVY K++T VKAMPN
Sbjct: 501 ITIQLDGNLLGSNDLAKYKASWIELSHVDNIVMTGSGTLDGQGTAVYKKAQTGTVKAMPN 680
Query: 1014 TLVLFHVI 991
+ +I
Sbjct: 681 VRAMLTLI 704
Score = 86.3 bits (182), Expect(4) = 4e-044
Identities = 37/49 (75%), Positives = 38/49 (77%)
Frame = -3 / +1
Query: 1199 ATSPSSWMATCWDQTTWTSTRRAGSNCLTLTTSGSPARARWTARGPPFI 1053
A SPSS MATCWD TTW STRRAGS+C T TTS ARAR TAR PPFI
Sbjct: 496 APSPSSSMATCWDPTTWPSTRRAGSSCRTSTTSS*LARARSTARAPPFI 642
Score = 81.3 bits (171), Expect(3) = 3e-035
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -1 / +2
Query: 1198 QHRHPAGWQPAGIKRPGQVHGELDRIVSR*QHRDHRLGHAGRP 1070
+H HPA WQPAGI+RPGQV GELDR+V+R QHR LGHA RP
Sbjct: 497 RHHHPARWQPAGIQRPGQVQGELDRVVARRQHRHDWLGHARRP 625
Score = 79.9 bits (168), Expect(4) = 1e-061
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2 / -3
Query: 1193 MLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTA 1315
++ PLHGP KLRGPTR*SPLG++TVALPVA HADVHAS TA
Sbjct: 505 VMAPLHGPTKLRGPTR*SPLGMSTVALPVALHADVHAS*TA 383
Score = 79.9 bits (168), Expect(4) = 9e-048
Identities = 37/62 (59%), Positives = 40/62 (64%)
Frame = +1 / -2
Query: 1015 VGHRLHVVGLALAINGGPLAVQRARAGDPDVVNVRQFDPARRXXXXXXXXXXXAIQLDGD 1194
VGHRLH GL L INGG LAV+RARA DVV+VRQ DPAR AI+LDGD
Sbjct: 680 VGHRLHSAGLGLFINGGALAVERARASHDDVVDVRQLDPARLVLGQVVGSQQVAIELDGD 501
Query: 1195 VA 1200
A
Sbjct: 500 GA 495
Score = 72.1 bits (151), Expect(4) = 1e-062
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2 / +2
Query: 1527 RPQEGEMASAHNALRVFFILAVVCAVCTAKRTGA 1426
RP +GEMASA NALRVFFILA++CAVCTAKRTGA
Sbjct: 80 RPPQGEMASASNALRVFFILAILCAVCTAKRTGA 181
Score = 68.4 bits (143), Expect(4) = 9e-048
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1 / -2
Query: 1201 ALAWPSEVERADQVVALGDHHRGASGRFAR*RPRVLDCL 1317
ALA +EVERADQ+VALGD HRGASGR AR*RPRVL+ L
Sbjct: 497 ALARANEVERADQIVALGDEHRGASGRSAR*RPRVLNRL 381
Score = 62.9 bits (131), Expect(4) = 1e-061
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1 / -3
Query: 1381 ASSSATGGCRRFFLVGSCPFRCAYGTYHG*DEKHPESVVCGSHFSFLWP 1527
A S ++ C R + S PFRCAY *DE+HPES+ CGSHFS WP
Sbjct: 226 AGSRSSRVCCRVSRLCSGPFRCAYRA*DR*DEEHPESIACGSHFSLWWP 80
Score = 61.6 bits (128), Expect(4) = 4e-044
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -3 / +3
Query: 1526 GHRKEKWLPHTTLSGCFSS*PWYVPYAQRKGQEPTRKNRRQ 1404
GH +EKWLP LSGC SS* Y YAQRKG E R+ R+Q
Sbjct: 81 GHHREKWLPQAMLSGCSSS*RSYARYAQRKGPEQRRETRQQ 203
Score = 59.7 bits (124), Expect(3) = 3e-035
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 1525 ATGRRNGFRTQRSPGVFHPSRGMCRMHSEKDRSQQGRIG 1409
AT RNGFR Q S GV HPS M MHSEKDRS+ GR+G
Sbjct: 82 ATTGRNGFRKQCSQGVLHPSDPMRGMHSEKDRSKDGRLG 198
Score = 57.9 bits (120), Expect(4) = 9e-048
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = +3 / -2
Query: 1389 QRHRGLPPILPCWLLSFSLCIRHIPRLG*KTPGERCVRKPFLLPVA 1526
Q+ + L P LP L SFSLCI I LG*+TP E C+RKPFL VA
Sbjct: 218 QKQQSLLPSLPSLLRSFSLCIPRIGSLG*RTP*EHCLRKPFLPVVA 81
Score = 53.8 bits (111), Expect(3) = 3e-035
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1 / +2
Query: 1273 KRHGGDPQGRLPGRPSQLHWAMQGQQH 1193
KRHG PQGRL GRPSQL W +QG+ H
Sbjct: 425 KRHGAHPQGRLSGRPSQLRWPVQGRHH 505
Score = 53.8 bits (111), Expect(4) = 4e-044
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3 / +1
Query: 1283 KRPEAPRW*SPRATTWSALSTSLGHARAATSPSS 1182
+RPEAPR SPRAT WSALSTSL ARA + SS
Sbjct: 415 ERPEAPRCSSPRATIWSALSTSLARARAPSPSSS 516
Score = 48.3 bits (99), Expect(4) = 1e-061
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / -3
Query: 1315 LCAVRLAVAGRAELGDVERPAAASSS 1392
LC VRLAVA RAELGDVERPA + SS
Sbjct: 286 LCGVRLAVARRAELGDVERPAGSRSS 209
Score = 45.1 bits (92), Expect(4) = 1e-062
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / +1
Query: 1363 HLQARRDQRRQDGLHKGSP 1307
HLQARRD RRQDGLHKG P
Sbjct: 238 HLQARRDGRRQDGLHKGKP 294
Score = 43.2 bits (88), Expect(4) = 9e-048
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2 / -1
Query: 1307 WTAFVQSVLPSLVAPSLEMSNV 1372
W FV+SVLPS VAPSLEMSNV
Sbjct: 294 WFTFVESVLPSPVAPSLEMSNV 229
Score = 42.3 bits (86), Expect(4) = 4e-044
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTK 1315
TFDISKLGAT DGKTD TK
Sbjct: 230 TFDISKLGATGDGKTDSTK 286
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,610,460,839
Number of Sequences: 832831
Number of extensions: 23869471
Number of successful extensions: 262575
Number of sequences better than 1.0e-020: 171
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 53068053060
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)