TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696569.2.1
(1022 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 456 e-131
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 407 e-112
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 376 e-103
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 357 e-101
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 263 2e-091
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 334 1e-090
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 260 1e-090
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 293 2e-086
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 281 6e-086
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 274 4e-083
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 221 6e-080
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 221 2e-079
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 235 5e-079
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 293 3e-078
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 205 5e-075
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 279 4e-074
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 279 4e-074
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 279 6e-074
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 276 4e-073
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 275 1e-072
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 272 5e-072
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 266 3e-070
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 264 1e-069
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 262 8e-069
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 262 8e-069
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 262 8e-069
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 179 3e-067
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 182 3e-065
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 247 2e-064
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 247 2e-064
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 128 5e-064
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 154 6e-064
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 155 1e-062
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 237 2e-061
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 237 2e-061
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 227 2e-061
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 227 2e-061
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 236 6e-061
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 153 1e-060
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 234 2e-060
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 234 2e-060
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 137 9e-060
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 153 6e-059
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 161 1e-058
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 160 3e-058
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 153 4e-058
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 226 4e-058
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 145 5e-057
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 145 5e-057
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 210 2e-056
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 166 2e-056
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 111 2e-056
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 220 3e-056
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 137 4e-056
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 156 1e-055
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 154 4e-055
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 205 6e-055
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 156 8e-055
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 215 9e-055
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 215 9e-055
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 140 1e-054
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 162 3e-054
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 211 2e-053
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 128 1e-050
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 128 1e-050
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 145 2e-050
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 124 2e-050
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 114 2e-049
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 118 5e-049
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 135 7e-049
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 128 1e-048
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 153 5e-048
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 117 5e-048
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 117 1e-047
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 187 5e-047
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 113 6e-047
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 153 1e-046
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 175 9e-046
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 161 1e-045
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 140 5e-045
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 136 2e-044
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 126 2e-044
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 154 1e-043
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 92 2e-043
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 133 1e-042
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 99 2e-042
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 101 3e-042
gb|CL159581.1|CL159581 104_349_10804357_116_31382_181 Sorgh... 73 3e-042
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 90 4e-042
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 152 4e-042
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 96 6e-042
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 117 2e-041
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 170 3e-041
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 170 3e-041
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 158 4e-041
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 169 6e-041
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 165 1e-039
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 80 3e-039
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 84 4e-039
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 145 2e-038
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 117 3e-038
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 145 3e-038
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 149 5e-038
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 128 1e-037
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 141 1e-037
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 158 2e-037
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 158 2e-037
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 158 2e-037
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 115 2e-037
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 157 2e-037
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 90 6e-037
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 100 6e-037
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 100 6e-037
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 100 6e-037
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 155 8e-037
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 154 3e-036
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 154 3e-036
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 97 3e-036
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 153 4e-036
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 153 4e-036
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 93 4e-036
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 93 1e-035
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 80 1e-035
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 141 1e-035
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 147 2e-035
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 150 3e-035
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 148 1e-034
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 81 2e-034
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 101 3e-034
gb|BZ351065.1|BZ351065 hv18a09.g1 WGS-SbicolorF (JM107 adap... 147 3e-034
gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum m... 146 6e-034
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 144 2e-033
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 144 2e-033
gb|CW421780.1|CW421780 fsbb001f130l24f0 Sorghum methylation... 87 2e-033
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 85 3e-033
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 87 7e-033
gb|CW179534.1|CW179534 104_593_11160150_148_36628_019 Sorgh... 83 3e-032
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 82 4e-031
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 135 9e-031
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 135 9e-031
gb|CW406941.1|CW406941 fsbb001f100d03k0 Sorghum methylation... 90 1e-030
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 111 1e-030
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 95 8e-030
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 76 2e-029
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 131 2e-029
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 80 3e-029
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 130 4e-029
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 116 7e-029
gb|CW146462.1|CW146462 104_539_11139005_148_34986_025 Sorgh... 128 1e-028
gb|CW045027.1|CW045027 104_281_10509311_114_30236 Sorghum m... 128 1e-028
gb|CW056377.1|CW056377 104_298_10517649_115_30157 Sorghum m... 128 1e-028
gb|CW069981.1|CW069981 104_320_10526365_1_30089 Sorghum met... 128 1e-028
gb|CW216041.1|CW216041 104_648_11194902_148_37115_019 Sorgh... 128 1e-028
gb|CW412412.1|CW412412 fsbb001f108a17k0 Sorghum methylation... 128 1e-028
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 80 1e-028
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 80 1e-028
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 86 2e-028
gb|BF421314.1|BF421314 FM1_7_B08.b1_A003 Floral-Induced Mer... 88 3e-028
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 121 1e-027
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 125 1e-027
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 125 1e-027
gb|BG053558.1|BG053558 RHIZ2_10_G02.g1_A003 Rhizome2 (RHIZ2... 113 2e-027
gb|CW381842.1|CW381842 fsbb001f063g24k0 Sorghum methylation... 79 2e-027
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 95 2e-027
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 84 4e-027
gb|CL192765.1|CL192765 104_415_10940470_116_32261_081 Sorgh... 122 1e-026
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 78 2e-026
gb|CW448127.1|CW448127 fsbb001f181j14f0 Sorghum methylation... 121 2e-026
gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorgh... 120 3e-026
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 117 4e-026
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 76 7e-026
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 95 7e-026
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 118 2e-025
gb|BI075536.1|BI075536 IP1_21_G05.g1_A002 Immature pannicle... 105 3e-025
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 95 4e-025
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 95 4e-025
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 114 2e-024
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 106 4e-024
gb|CW171728.1|CW171728 104_582_11155897_116_36529_005 Sorgh... 97 8e-024
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 69 1e-023
gb|CW379039.1|CW379039 fsbb001f058b16k0 Sorghum methylation... 95 2e-022
gb|CD462412.1|CD462412 ETH1_37_C09.g1_A002 Ethylene-treated... 82 2e-021
gb|CW345706.1|CW345706 104_848_11488642_148_36211_033 Sorgh... 89 2e-021
gb|CW260111.1|CW260111 104_726_11228790_116_35191_019 Sorgh... 92 4e-021
gb|CD432755.1|CD432755 ETH1_33_A06.b1_A002 Ethylene-treated... 103 6e-021
gb|CW140474.1|CW140474 104_531_11135799_148_34922_064 Sorgh... 63 8e-021
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 456 bits (991), Expect(2) = e-131
Identities = 178/194 (91%), Positives = 187/194 (96%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 214 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 393
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKKGGIRFTI
Sbjct: 394 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTI 573
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
NGHSYFNLVLVTNVAGAGDV+SVSI+GS TGWQPMSRNWGQNWQSNS LD Q+LSFQVTA
Sbjct: 574 NGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTA 753
Query: 606 SDGRTVTSNGAVPA 647
SDGRTVTSNG PA
Sbjct: 754 SDGRTVTSNGVAPA 795
Score = 367 bits (796), Expect = e-100
Identities = 156/187 (83%), Positives = 159/187 (85%)
Frame = -2 / -2
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
NW PSKVWPNCQPAG PLLVTVRPSLAVTW E SR ELLCQFWPQFRDMGCHPV E
Sbjct: 833 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHPVLE 654
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET+ TSPAPATLVTSTRLK*E PLMVNR+PPFFTHGTLL ATGTMPARYCA+ RKAG
Sbjct: 653 PLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAG 474
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLN 146
AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG *QDPHAAPSLN
Sbjct: 473 CAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLN 294
Query: 145 SAVLSAA 125
SAVLSAA
Sbjct: 293 SAVLSAA 273
Score = 109 bits (233), Expect(2) = 1e-025
Identities = 48/72 (66%), Positives = 48/72 (66%)
Frame = -1 / -1
Query: 533 GHGLPPRAGAPDGDGAHVAGARXXXXXXXXXXXXXVDGEPDAALLHARHSPERDGHDAGA 354
GHGLPP AGA DGDG HV GA VDGEPD ALLHARH P DGHDAGA
Sbjct: 681 GHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGA 502
Query: 353 VLRDAEEGRLGH 318
VLRD EEGRL H
Sbjct: 501 VLRDLEEGRLRH 466
Score = 68.9 bits (144), Expect(5) = 7e-043
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +2
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTW AP TC+PSPS APA GGSPC
Sbjct: 596 WCW*PTWPAPGTCSPSPSRAPAPGGSPC 679
Score = 53.8 bits (111), Expect(5) = 7e-043
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HG AGLP QE AVREEGR PVHHQR LLL
Sbjct: 465 HGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLLL 590
Score = 48.7 bits (100), Expect(5) = 7e-043
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 518 VAAHVPELGPELAEQLVPGQAGALVPG 598
VAAHVPELGPELAEQL P + L+PG
Sbjct: 666 VAAHVPELGPELAEQLAPRRPEPLLPG 746
Score = 48.3 bits (99), Expect(5) = 7e-043
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 74 RRLRVRQPVQHGVRHEHGGAEH 139
RR+ VR+ VQHGVRHEHGGAEH
Sbjct: 222 RRVWVREHVQHGVRHEHGGAEH 287
Score = 32.7 bits (65), Expect(2) = e-131
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2 / +3
Query: 650 LAVRPDLRGRPVL 688
LAVRPDLRGRPVL
Sbjct: 798 LAVRPDLRGRPVL 836
Score = 29.9 bits (59), Expect(5) = 7e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 360 PAGHHHRDGH 389
Score = 28.6 bits (56), Expect(2) = 1e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 318 CRSAGAAGCT 289
CRSAGAAGCT
Sbjct: 466 CRSAGAAGCT 437
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 407 bits (884), Expect = e-112
Identities = 156/167 (93%), Positives = 164/167 (98%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 201 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 380
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKKGGIRFTI
Sbjct: 381 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTI 560
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNS 566
NGHSYFNLVLVTNVAGAGDV+SVSI+GS TGWQPMSRNWGQNWQSNS
Sbjct: 561 NGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNS 701
Score = 290 bits (628), Expect = 2e-077
Identities = 125/147 (85%), Positives = 128/147 (87%)
Frame = -2 / -3
Query: 565 ELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGT 386
ELLCQFWPQFRDMGCHPV EP MET+ TSPAPATLVTSTRLK*E PLMVNR+PPFFTHGT
Sbjct: 700 ELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGT 521
Query: 385 LLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXX 206
LL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 520 LL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHD 341
Query: 205 XXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 340 CPSLSQRSS*QDPHAAPSLNSAVLSAA 260
Score = 109 bits (233), Expect(2) = 1e-025
Identities = 48/72 (66%), Positives = 48/72 (66%)
Frame = -1 / -2
Query: 533 GHGLPPRAGAPDGDGAHVAGARXXXXXXXXXXXXXVDGEPDAALLHARHSPERDGHDAGA 354
GHGLPP AGA DGDG HV GA VDGEPD ALLHARH P DGHDAGA
Sbjct: 668 GHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGA 489
Query: 353 VLRDAEEGRLGH 318
VLRD EEGRL H
Sbjct: 488 VLRDLEEGRLRH 453
Score = 68.9 bits (144), Expect(5) = 3e-040
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +1
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTW AP TC+PSPS APA GGSPC
Sbjct: 583 WCW*PTWPAPGTCSPSPSRAPAPGGSPC 666
Score = 53.8 bits (111), Expect(5) = 3e-040
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2 / +2
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HG AGLP QE AVREEGR PVHHQR LLL
Sbjct: 452 HGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLLL 577
Score = 48.3 bits (99), Expect(5) = 3e-040
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / +2
Query: 74 RRLRVRQPVQHGVRHEHGGAEH 139
RR+ VR+ VQHGVRHEHGGAEH
Sbjct: 209 RRVWVREHVQHGVRHEHGGAEH 274
Score = 39.6 bits (80), Expect(5) = 3e-040
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2 / +2
Query: 518 VAAHVPELGPELAEQL 565
VAAHVPELGPELAEQL
Sbjct: 653 VAAHVPELGPELAEQL 700
Score = 29.9 bits (59), Expect(5) = 3e-040
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 347 PAGHHHRDGH 376
Score = 28.6 bits (56), Expect(2) = 1e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 318 CRSAGAAGCT 289
CRSAGAAGCT
Sbjct: 453 CRSAGAAGCT 424
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 376 bits (816), Expect = e-103
Identities = 145/158 (91%), Positives = 153/158 (96%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GG CGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 218 TMGGVCGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 397
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKKGGIRFTI
Sbjct: 398 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTI 577
Query: 426 NGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRN 539
NGHSY NLVLVTNVAGAGDV+SVSI+GS TGWQPMSRN
Sbjct: 578 NGHSYINLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRN 691
Score = 262 bits (566), Expect = 8e-069
Identities = 115/138 (83%), Positives = 118/138 (85%)
Frame = -2 / -2
Query: 538 FRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMP 359
FRDMGCHPV EP MET+ TSPAPATLVTSTRL *E PLMVNR+PPFFTHGTLL ATGTMP
Sbjct: 690 FRDMGCHPVLEPLMETDCTSPAPATLVTSTRLM*EWPLMVNRIPPFFTHGTLL*ATGTMP 511
Query: 358 ARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX 179
ARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 510 ARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCPSLSQRSS 331
Query: 178 *QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 330 *QDPHAAPSLNSAVLSAA 277
Score = 109 bits (233), Expect(2) = 1e-025
Identities = 48/72 (66%), Positives = 48/72 (66%)
Frame = -1 / -1
Query: 533 GHGLPPRAGAPDGDGAHVAGARXXXXXXXXXXXXXVDGEPDAALLHARHSPERDGHDAGA 354
GHGLPP AGA DGDG HV GA VDGEPD ALLHARH P DGHDAGA
Sbjct: 685 GHGLPPGAGALDGDGLHVPGAGHVGHQHQVDVGVAVDGEPDPALLHARHPPVGDGHDAGA 506
Query: 353 VLRDAEEGRLGH 318
VLRD EEGRL H
Sbjct: 505 VLRDLEEGRLRH 470
Score = 68.9 bits (144), Expect(4) = 3e-033
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTW AP TC+PSPS APA GGSPC
Sbjct: 600 WCW*PTWPAPGTCSPSPSRAPAPGGSPC 683
Score = 51.9 bits (107), Expect(4) = 3e-033
Identities = 23/41 (56%), Positives = 23/41 (56%)
Frame = +2 / +1
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALL 439
HG AGLP QE AVREEGR PVHHQR LL
Sbjct: 469 HGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLL 591
Score = 48.3 bits (99), Expect(4) = 3e-033
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / +1
Query: 74 RRLRVRQPVQHGVRHEHGGAEH 139
RR+ VR+ VQHGVRHEHGGAEH
Sbjct: 226 RRVWVREHVQHGVRHEHGGAEH 291
Score = 29.9 bits (59), Expect(4) = 3e-033
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 364 PAGHHHRDGH 393
Score = 28.6 bits (56), Expect(2) = 1e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 318 CRSAGAAGCT 289
CRSAGAAGCT
Sbjct: 470 CRSAGAAGCT 441
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 357 bits (773), Expect(2) = e-101
Identities = 139/153 (90%), Positives = 146/153 (95%)
Frame = +3 / +2
Query: 189 CDNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIV 368
CDNDG+ CLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPH DMA+PAFL+IAQYRAGIV
Sbjct: 2 CDNDGQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHLDMAQPAFLQIAQYRAGIV 181
Query: 369 PVAFRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQ 548
PVA+RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDV+SVSI+GS TGWQPMSRNWGQ
Sbjct: 182 PVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQ 361
Query: 549 NWQSNSYLDRQALSFQVTASDGRTVTSNGAVPA 647
NWQSNS LD Q+LSFQVTASDGRTVTSNG PA
Sbjct: 362 NWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPA 460
Score = 336 bits (727), Expect = 5e-091
Identities = 138/157 (87%), Positives = 141/157 (89%)
Frame = -2 / -3
Query: 685 NWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVRE 506
NW PSKVWPNCQPAG PLLVTVRPSLAVTW E SR ELLCQFWPQFRDMGCHPV E
Sbjct: 498 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHPVLE 319
Query: 505 PRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAG 326
P MET+ TSPAPATLVTSTRLK*E PLMVNR+PPFFTHGTLL ATGTMPARYCA+ RKAG
Sbjct: 318 PLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAG 139
Query: 325 SAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 138 CAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 28
Score = 109 bits (233), Expect(2) = 1e-024
Identities = 48/72 (66%), Positives = 48/72 (66%)
Frame = -1 / -2
Query: 533 GHGLPPRAGAPDGDGAHVAGARXXXXXXXXXXXXXVDGEPDAALLHARHSPERDGHDAGA 354
GHGLPP AGA DGDG HV GA VDGEPD ALLHARH P DGHDAGA
Sbjct: 346 GHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGA 167
Query: 353 VLRDAEEGRLGH 318
VLRD EEGRL H
Sbjct: 166 VLRDLEEGRLRH 131
Score = 68.9 bits (144), Expect(4) = 7e-034
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTW AP TC+PSPS APA GGSPC
Sbjct: 261 WCW*PTWPAPGTCSPSPSRAPAPGGSPC 344
Score = 53.8 bits (111), Expect(4) = 7e-034
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2 / +1
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HG AGLP QE AVREEGR PVHHQR LLL
Sbjct: 130 HGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLLL 255
Score = 48.7 bits (100), Expect(4) = 7e-034
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 518 VAAHVPELGPELAEQLVPGQAGALVPG 598
VAAHVPELGPELAEQL P + L+PG
Sbjct: 331 VAAHVPELGPELAEQLAPRRPEPLLPG 411
Score = 32.7 bits (65), Expect(2) = e-101
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2 / +1
Query: 650 LAVRPDLRGRPVL 688
LAVRPDLRGRPVL
Sbjct: 463 LAVRPDLRGRPVL 501
Score = 29.9 bits (59), Expect(4) = 7e-034
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 25 PAGHHHRDGH 54
Score = 25.4 bits (49), Expect(2) = 1e-024
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 318 CRSAGAAGCT 289
C SAGAAGCT
Sbjct: 131 CPSAGAAGCT 102
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 263 bits (569), Expect(2) = 2e-091
Identities = 102/136 (75%), Positives = 114/136 (83%)
Frame = +3 / +2
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV++RRVPC K
Sbjct: 215 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 394
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
GG+RFTING YFNLVL+TNVAGAGD+ S++ S TGW MSRNWGQNWQSN+ L Q
Sbjct: 395 SGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSNAILVGQ 574
Query: 582 ALSFQVTASDGRTVTS 629
ALSF+VT SD RT TS
Sbjct: 575 ALSFRVTGSDRRTSTS 622
Score = 185 bits (399), Expect(2) = 5e-048
Identities = 88/134 (65%), Positives = 90/134 (67%)
Frame = -2 / -2
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
V VR SL VT ESA +R L CQFWPQFRDM HPV + SPAPAT V STR
Sbjct: 618 VEVRRSLPVTRKESAWPTRMALDCQFWPQFRDMVSHPVLDAFTLARTMSPAPATFVISTR 439
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK PLMVNR PP F HGT TGTMPARY AM R G A SKCGRGGLHQPPSS G
Sbjct: 438 LKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGS 259
Query: 265 P*LGGQKLVAVTVM 224
* GGQKLVAVT M
Sbjct: 258 A*FGGQKLVAVTRM 217
Score = 95.0 bits (201), Expect(2) = 2e-091
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCL 215
T GGACGYGNLYS GYG + AALSTALFN+G +CG+C+EL+C+N W +
Sbjct: 46 TMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGACFELKCENQPGWAV 195
Score = 27.6 bits (54), Expect(2) = 5e-048
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 169 PHAAPSLNSAVLSAA 125
P PSLNSAVLSAA
Sbjct: 149 PQLRPSLNSAVLSAA 105
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 334 bits (724), Expect = 1e-090
Identities = 128/136 (94%), Positives = 134/136 (98%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 223 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 402
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKKGGIRFTI
Sbjct: 403 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTI 582
Query: 426 NGHSYFNLVLVTNVAG 473
NGHSYFNLVLVTNVAG
Sbjct: 583 NGHSYFNLVLVTNVAG 630
Score = 221 bits (478), Expect = 1e-056
Identities = 99/117 (84%), Positives = 101/117 (86%)
Frame = -2 / -1
Query: 475 APATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGG 296
APATLVTSTRLK*E PLMVNR+PPFFTHGTLL ATGTMPARYCA+ RKAG AMSKCGRGG
Sbjct: 632 APATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGG 453
Query: 295 LHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LHQPPSSLGRP*LGGQKLVAVTVMVPG *QDPHAAPSLNSAVLSAA
Sbjct: 452 LHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAA 282
Score = 53.8 bits (111), Expect(4) = 4e-022
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HG AGLP QE AVREEGR PVHHQR LLL
Sbjct: 474 HGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLLL 599
Score = 48.3 bits (99), Expect(4) = 4e-022
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 74 RRLRVRQPVQHGVRHEHGGAEH 139
RR+ VR+ VQHGVRHEHGGAEH
Sbjct: 231 RRVWVREHVQHGVRHEHGGAEH 296
Score = 29.9 bits (59), Expect(4) = 4e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 369 PAGHHHRDGH 398
Score = 29.0 bits (57), Expect(4) = 4e-022
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 448 WCW*PTWRA 474
WCW*PTW A
Sbjct: 605 WCW*PTWPA 631
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 260 bits (562), Expect(3) = 1e-090
Identities = 100/133 (75%), Positives = 112/133 (84%)
Frame = +3 / +3
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV++RRVPC K
Sbjct: 423 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 602
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
GG+RFTING YFNLVL+TNVAGAGD+ S++ S TGW MSRNWGQNWQSN+ L Q
Sbjct: 603 SGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSNAILVGQ 782
Query: 582 ALSFQVTASDGRT 620
ALSF+VT SD RT
Sbjct: 783 ALSFRVTGSDRRT 821
Score = 184 bits (396), Expect(2) = 1e-046
Identities = 87/132 (65%), Positives = 89/132 (67%)
Frame = -2 / -1
Query: 619 VRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK 440
VR SL VT ESA +R L CQFWPQFRDM HPV + SPAPAT V STRLK
Sbjct: 820 VRRSLPVTRKESAWPTRMALDCQFWPQFRDMVSHPVLDAFTLARTMSPAPATFVISTRLK 641
Query: 439 *ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP* 260
PLMVNR PP F HGT TGTMPARY AM R G A SKCGRGGLHQPPSS G *
Sbjct: 640 YRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA* 461
Query: 259 LGGQKLVAVTVM 224
GGQKLVAVT M
Sbjct: 460 FGGQKLVAVTRM 425
Score = 92.3 bits (195), Expect(3) = 1e-090
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRW 209
T GGACGYGNLYS GYG + AAL TALFN+G +CG+C+EL+C+N W
Sbjct: 255 TMGGACGYGNLYSQGYGVNNAALGTALFNEGLSCGACFELKCENHPGW 398
Score = 24.4 bits (47), Expect(2) = 1e-046
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 169 PHAAPSLNSAVLSAA 125
P PSLNSAV SAA
Sbjct: 358 PQLRPSLNSAVPSAA 314
Score = 22.1 bits (42), Expect(3) = 1e-090
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 204 RWCLPGTITVTAT 242
RWC PG+ ++ T
Sbjct: 399 RWCRPGSPSILVT 437
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 293 bits (634), Expect(2) = 2e-086
Identities = 113/122 (92%), Positives = 119/122 (97%)
Frame = +3 / +2
Query: 219 GTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCV 398
GTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCV
Sbjct: 239 GTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCV 418
Query: 399 KKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDR 578
KKGGIRFTINGHSYFNLVLVTNVAGAGDV+SVSI+GS TGWQPMSRNWGQNWQSNS LD
Sbjct: 419 KKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDG 598
Query: 579 QA 584
Q+
Sbjct: 599 QS 604
Score = 259 bits (560), Expect = 5e-068
Identities = 108/119 (90%), Positives = 111/119 (93%)
Frame = -2 / -3
Query: 574 SRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFT 395
SR ELLCQFWPQFRDMGCHPV EP MET+ TSPAPATLVTSTRLK*E PLMVNR+PPFFT
Sbjct: 594 SRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFT 415
Query: 394 HGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 218
HGTLL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP
Sbjct: 414 HGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 238
Score = 105 bits (225), Expect(2) = 2e-024
Identities = 47/72 (65%), Positives = 47/72 (65%)
Frame = -1 / -2
Query: 533 GHGLPPRAGAPDGDGAHVAGARXXXXXXXXXXXXXVDGEPDAALLHARHSPERDGHDAGA 354
GHGLPP AGA DGDG HV GA VDGEPD ALLHA H P DGHDAGA
Sbjct: 553 GHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHAWHPPVGDGHDAGA 374
Query: 353 VLRDAEEGRLGH 318
VLRD EEGRL H
Sbjct: 373 VLRDLEEGRLRH 338
Score = 68.9 bits (144), Expect(5) = 2e-033
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTW AP TC+PSPS APA GGSPC
Sbjct: 468 WCW*PTWPAPGTCSPSPSRAPAPGGSPC 551
Score = 50.6 bits (104), Expect(5) = 2e-033
Identities = 22/42 (52%), Positives = 23/42 (54%)
Frame = +2 / +1
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HG GLP QE A+REEGR PVHHQR LLL
Sbjct: 337 HGATGLPPDRAVPRRHRARRLQEGAMREEGRDPVHHQRPLLL 462
Score = 48.3 bits (99), Expect(2) = 2e-086
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTST 125
T GGACGYGN+YSTGYGT T
Sbjct: 191 TMGGACGYGNMYSTGYGTIT 250
Score = 42.8 bits (87), Expect(5) = 2e-033
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / +1
Query: 518 VAAHVPELGPELAEQLVP 571
VAAHVPELGPELAEQL P
Sbjct: 538 VAAHVPELGPELAEQLAP 591
Score = 32.7 bits (65), Expect(5) = 2e-033
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 74 RRLRVRQPVQHGVRHEH 124
RR+ VR+ VQHGVRH H
Sbjct: 199 RRVWVREHVQHGVRHHH 249
Score = 28.6 bits (56), Expect(2) = 2e-024
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 318 CRSAGAAGCT 289
CRSAGAAGCT
Sbjct: 338 CRSAGAAGCT 309
Score = 22.1 bits (42), Expect(5) = 2e-033
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / +1
Query: 221 HHHRHGH 241
HHHR GH
Sbjct: 241 HHHRDGH 261
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 281 bits (607), Expect(3) = 6e-086
Identities = 111/127 (87%), Positives = 118/127 (92%)
Frame = +3 / +2
Query: 255 PNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGH 434
P P+ GGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKKGGIRFTINGH
Sbjct: 407 PTTASPATTGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGH 586
Query: 435 SYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDG 614
SYFNLVLVTNVAGAGDV+SVSI+GS TGWQPMSRNWGQNWQSNS LD Q+LSFQVTASDG
Sbjct: 587 SYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDG 766
Query: 615 RTVTSNG 635
RTVTSNG
Sbjct: 767 RTVTSNG 787
Score = 248 bits (535), Expect = 1e-064
Identities = 104/127 (81%), Positives = 108/127 (85%)
Frame = -2 / -2
Query: 634 PLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVT 455
PLLVTVRPSLAVTW E SR ELLCQFWPQFRDMGCHPV EP MET+ TSPAPATLVT
Sbjct: 786 PLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVT 607
Query: 454 STRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSS 275
STRLK*E PLMVNR+PPFFTHGTLL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPP
Sbjct: 606 STRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPVV 427
Query: 274 LGRP*LG 254
G +G
Sbjct: 426 AGEAVVG 406
Score = 183 bits (395), Expect(4) = 3e-079
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 217 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 396
Query: 246 FCPPNYGLPSDDGGWCNPPRP 308
FCPPNYGLPSDDG P P
Sbjct: 397 FCPPNYGLPSDDGRLVQPAAP 459
Score = 109 bits (233), Expect(3) = 2e-046
Identities = 48/72 (66%), Positives = 48/72 (66%)
Frame = -1 / -1
Query: 533 GHGLPPRAGAPDGDGAHVAGARXXXXXXXXXXXXXVDGEPDAALLHARHSPERDGHDAGA 354
GHGLPP AGA DGDG HV GA VDGEPD ALLHARH P DGHDAGA
Sbjct: 685 GHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGA 506
Query: 353 VLRDAEEGRLGH 318
VLRD EEGRL H
Sbjct: 505 VLRDLEEGRLRH 470
Score = 88.1 bits (186), Expect(3) = 2e-046
Identities = 43/61 (70%), Positives = 43/61 (70%)
Frame = -2 / -3
Query: 307 GRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSA 128
G G PSSLGRP*LGGQKLVAVTVMVPG *QDPHAAPSLNSAVLSA
Sbjct: 458 GAAGCTSRPSSLGRP*LGGQKLVAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSA 279
Query: 127 A 125
A
Sbjct: 278 A 276
Score = 68.9 bits (144), Expect(4) = 3e-079
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTW AP TC+PSPS APA GGSPC
Sbjct: 600 WCW*PTWPAPGTCSPSPSRAPAPGGSPC 683
Score = 53.8 bits (111), Expect(4) = 3e-079
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2 / +1
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HG AGLP QE AVREEGR PVHHQR LLL
Sbjct: 469 HGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLLL 594
Score = 48.7 bits (100), Expect(4) = 3e-079
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 518 VAAHVPELGPELAEQLVPGQAGALVPG 598
VAAHVPELGPELAEQL P + L+PG
Sbjct: 670 VAAHVPELGPELAEQLAPRRPEPLLPG 750
Score = 48.3 bits (99), Expect(3) = 6e-086
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 74 RRLRVRQPVQHGVRHEHGGAEH 139
RR+ VR+ VQHGVRHEHGGAEH
Sbjct: 225 RRVWVREHVQHGVRHEHGGAEH 290
Score = 29.9 bits (59), Expect(3) = 6e-086
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 363 PAGHHHRDGH 392
Score = 28.6 bits (56), Expect(3) = 2e-046
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 318 CRSAGAAGCT 289
CRSAGAAGCT
Sbjct: 470 CRSAGAAGCT 441
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 274 bits (593), Expect(2) = 4e-083
Identities = 106/109 (97%), Positives = 106/109 (97%)
Frame = +3 / +3
Query: 138 TALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFD 317
TALFNDGAACGSCYELRCDN GR CLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFD
Sbjct: 318 TALFNDGAACGSCYELRCDNAGRSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFD 497
Query: 318 MAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTN 464
MAEPAFL IAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTN
Sbjct: 498 MAEPAFLHIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTN 644
Score = 221 bits (476), Expect = 2e-056
Identities = 96/110 (87%), Positives = 96/110 (87%)
Frame = -2 / -1
Query: 466 TLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQ 287
TLVTSTRLK*ECPLMVNRMPPFFTHGTLL ATGTMPARYCAM RKAGSAMSKCGRGGLHQ
Sbjct: 646 TLVTSTRLK*ECPLMVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQ 467
Query: 286 PPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAV 137
PPSSLGRP*LGGQKLVAVTVMVPG *QDPHAAPSLNSAV
Sbjct: 466 PPSSLGRP*LGGQKLVAVTVMVPGRHDRPALSHRSS*QDPHAAPSLNSAV 317
Score = 61.1 bits (127), Expect(3) = 3e-021
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 317 HGRAGLPXXXXXXXXXXXXXXQESAVREEGRHPVHHQRALLL 442
HGRA LP QESAVREEGRHPVHHQRALLL
Sbjct: 497 HGRARLPPHRAVPRRHRARRLQESAVREEGRHPVHHQRALLL 622
Score = 56.1 bits (116), Expect(2) = 4e-083
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAAL 134
T GGACGYGNLYSTGYGT+TAAL
Sbjct: 245 TMGGACGYGNLYSTGYGTNTAAL 313
Score = 50.1 bits (103), Expect(3) = 3e-021
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2 / +1
Query: 74 RRLRVRQPVQHGVRHEHGGAE 136
RR+RVRQPVQH VRHEHGGAE
Sbjct: 253 RRVRVRQPVQHRVRHEHGGAE 315
Score = 29.9 bits (59), Expect(3) = 3e-021
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 212 PAGHHHRHGH 241
PAGHHHR GH
Sbjct: 392 PAGHHHRDGH 421
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 221 bits (476), Expect(2) = 6e-080
Identities = 82/132 (62%), Positives = 105/132 (79%)
Frame = +3 / +1
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
T+TVTATN CP +Y PS+DGGWCNPPR HFDM++P++ +I Y GIVPV ++RV C +
Sbjct: 193 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 372
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
GG+RFTING+ YF LVL+ NVAG G + +V I+GS TGW MSRNWG NWQ+NS L RQ
Sbjct: 373 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQ 552
Query: 582 ALSFQVTASDGR 617
++SF+VTA++GR
Sbjct: 553 SISFRVTATNGR 588
Score = 135 bits (289), Expect(2) = 4e-033
Identities = 70/131 (53%), Positives = 74/131 (56%)
Frame = -2 / -3
Query: 613 PSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*E 434
P +AVT E CL R L CQ PQFRDM HPV EP + T P PATL ST LK
Sbjct: 584 PLVAVTRKEMLCLVRSLLACQLAPQFRDMVIHPVDEPLICTALMDPGPATLKMSTSLKYL 405
Query: 433 CPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LG 254
PLMV R PP TL TGTMP + G MSKC RGGLH PPS LG *
Sbjct: 404 LPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHPPSLLGWE*SA 225
Query: 253 GQKLVAVTVMV 221
G +LVAVTV V
Sbjct: 224 GHRLVAVTVTV 192
Score = 99.1 bits (210), Expect(2) = 6e-080
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +3 / +1
Query: 63 RTTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
R TGGACGYGNLYS GYGT TAALS A+FN GAACG CY+++CD +TVT T
Sbjct: 28 RRTGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGVTVTVT 207
Score = 28.1 bits (55), Expect(2) = 4e-033
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 169 PHAAPSLNSAVLSAA 125
PHAAP LN A LSAA
Sbjct: 134 PHAAPPLNIAKLSAA 90
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 221 bits (476), Expect(2) = 2e-079
Identities = 82/132 (62%), Positives = 105/132 (79%)
Frame = +3 / +3
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
T+TVTATN CP +Y PS+DGGWCNPPR HFDM++P++ +I Y GIVPV ++RV C +
Sbjct: 183 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 362
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
GG+RFTING+ YF LVL+ NVAG G + +V I+GS TGW MSRNWG NWQ+NS L RQ
Sbjct: 363 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQ 542
Query: 582 ALSFQVTASDGR 617
++SF+VTA++GR
Sbjct: 543 SISFRVTATNGR 578
Score = 135 bits (289), Expect(3) = 4e-036
Identities = 70/131 (53%), Positives = 74/131 (56%)
Frame = -2 / -1
Query: 613 PSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*E 434
P +AVT E CL R L CQ PQFRDM HPV EP + T P PATL ST LK
Sbjct: 574 PLVAVTRKEMLCLVRSLLACQLAPQFRDMVIHPVDEPLICTALMDPGPATLKMSTSLKYL 395
Query: 433 CPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LG 254
PLMV R PP TL TGTMP + G MSKC RGGLH PPS LG *
Sbjct: 394 LPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHPPSLLGWE*SA 215
Query: 253 GQKLVAVTVMV 221
G +LVAVTV V
Sbjct: 214 GHRLVAVTVTV 182
Score = 97.7 bits (207), Expect(2) = 2e-079
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = +3 / +3
Query: 60 ARTTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTA 239
A T GGACGYGNLYS GYGT TAALS A+FN GAACG CY+++CD +TVT
Sbjct: 15 ADTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGVTVTV 194
Query: 240 T 242
T
Sbjct: 195 T 197
Score = 28.1 bits (55), Expect(3) = 4e-036
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 169 PHAAPSLNSAVLSAA 125
PHAAP LN A LSAA
Sbjct: 124 PHAAPPLNIAKLSAA 80
Score = 28.1 bits (55), Expect(3) = 4e-036
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 682 WPPSKVWPNCQ 650
WP KVWP+CQ
Sbjct: 643 WPLVKVWPSCQ 611
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 235 bits (508), Expect(2) = 5e-079
Identities = 90/136 (66%), Positives = 107/136 (78%)
Frame = +3 / +2
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
++ +TATNFCPPNY LPSD GGWCNPPR HFD++ PAFLRIA YRA IVPV +RRV C K
Sbjct: 446 SVVITATNFCPPNYALPSDAGGWCNPPRHHFDLSMPAFLRIADYRASIVPVTYRRVACRK 625
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
GGIRF +NG YFNLVL++NV GAGDV +++ S T W P++RNWGQNWQ +S L
Sbjct: 626 SGGIRFGVNGFRYFNLVLISNVGGAGDVVRAAVKASHTEWLPLARNWGQNWQCSSILVGG 805
Query: 582 ALSFQVTASDGRTVTS 629
ALSF+VT SD RT+TS
Sbjct: 806 ALSFRVTTSDRRTLTS 853
Score = 158 bits (339), Expect = 2e-037
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = -2 / -1
Query: 625 VTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTR 446
V VR SL VT ESA +R EL CQF PQ R G H V E TSPAP TL+ STR
Sbjct: 849 VRVRRSLVVTRKESAPPTRMELHCQFCPQLRARGSHSVCEALTAARTTSPAPPTLLMSTR 670
Query: 445 LK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGR 266
LK* PL NRMPP H TL TGTM AR AMRRKAG SK RGGLH PP+S G
Sbjct: 669 LK*RKPLTPNRMPPDLRHATLRYVTGTMLAR*SAMRRKAGMERSKWWRGGLHHPPASEGS 490
Query: 265 P*LGGQKLVAV 233
*LGGQKLVAV
Sbjct: 489 A*LGGQKLVAV 457
Score = 81.3 bits (171), Expect(2) = 5e-079
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRC 191
T GGACGYGNLY GYG +T ALST LFN+G CG+C+E++C
Sbjct: 269 TMGGACGYGNLYIAGYGMATGALSTPLFNNGLTCGACFEIKC 394
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 293 bits (634), Expect = 3e-078
Identities = 113/120 (94%), Positives = 116/120 (96%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYSTGYGT+TAALSTALFNDGAACGSCY+LRCDN GR CLPGTITVTATN
Sbjct: 247 TMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYKLRCDNAGRSCLPGTITVTATN 426
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
FCPPNYGLPSD+GGWCNPPRPHFDMAEPAFL IAQYRAGIVPVAFRRVPCVKKGGIRFTI
Sbjct: 427 FCPPNYGLPSDNGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVKKGGIRFTI 606
Score = 194 bits (418), Expect = 2e-048
Identities = 85/100 (85%), Positives = 85/100 (85%)
Frame = -2 / -3
Query: 424 MVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQK 245
MVNRMPPFFTHGTLL ATGTMPARYCAM RKAGSAMSKCGRGGLHQPP SLGRP*LGGQK
Sbjct: 605 MVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPLSLGRP*LGGQK 426
Query: 244 LVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
LVAVTVMVPG *QDPHAAPSLNSAVLSAA
Sbjct: 425 LVAVTVMVPGRHDRPALSHRSL*QDPHAAPSLNSAVLSAA 306
>gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 5', mRNA sequence
Length = 744
Score = 205 bits (443), Expect(2) = 5e-075
Identities = 76/123 (61%), Positives = 96/123 (78%)
Frame = +3 / +3
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
T+TVTATN CP +Y PS+DGGWCNPPR HFDM++P++ +I Y GIVPV ++RV C +
Sbjct: 375 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 554
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
GG+RFTING+ YF LVL+ NVAG G + +V I+GS TGW MSRNWG NWQ+NS L RQ
Sbjct: 555 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQ 734
Query: 582 ALS 590
++S
Sbjct: 735 SIS 743
Score = 127 bits (273), Expect(2) = 6e-031
Identities = 66/123 (53%), Positives = 69/123 (56%)
Frame = -2 / -3
Query: 589 ESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNRM 410
E CL R L CQ PQFRDM HPV EP + T P PATL ST LK PLMV R
Sbjct: 742 EMLCLVRSLLACQLAPQFRDMVIHPVDEPLICTALMDPGPATLKMSTSLKYLLPLMVKRT 563
Query: 409 PPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVT 230
PP TL TGTMP + G MSKC RGGLH PPS LG * G +LVAVT
Sbjct: 562 PPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHPPSLLGWE*SAGHRLVAVT 383
Query: 229 VMV 221
V V
Sbjct: 382 VTV 374
Score = 97.7 bits (207), Expect(2) = 5e-075
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = +3 / +3
Query: 60 ARTTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTA 239
A T GGACGYGNLYS GYGT TAALS A+FN GAACG CY+++CD +TVT
Sbjct: 207 AGTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGVTVTV 386
Query: 240 T 242
T
Sbjct: 387 T 389
Score = 28.1 bits (55), Expect(2) = 6e-031
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 169 PHAAPSLNSAVLSAA 125
PHAAP LN A LSAA
Sbjct: 316 PHAAPPLNIAKLSAA 272
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 279 bits (604), Expect = 4e-074
Identities = 105/113 (92%), Positives = 111/113 (98%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 201 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 380
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKK 404
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKK
Sbjct: 381 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKK 539
Score = 173 bits (372), Expect = 4e-042
Identities = 77/93 (82%), Positives = 78/93 (83%)
Frame = -2 / -2
Query: 403 FFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 224
FFTHGTLL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM
Sbjct: 538 FFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 359
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
VPG *QDPHAAPSLNSAVLSAA
Sbjct: 358 VPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAA 260
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 279 bits (604), Expect = 4e-074
Identities = 105/113 (92%), Positives = 111/113 (98%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 204 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 383
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKK 404
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKK
Sbjct: 384 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKK 542
Score = 173 bits (372), Expect = 4e-042
Identities = 77/93 (82%), Positives = 78/93 (83%)
Frame = -2 / -2
Query: 403 FFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 224
FFTHGTLL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM
Sbjct: 541 FFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 362
Query: 223 VPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
VPG *QDPHAAPSLNSAVLSAA
Sbjct: 361 VPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAA 263
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 279 bits (603), Expect = 6e-074
Identities = 105/114 (92%), Positives = 111/114 (97%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFN GAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 203 TMGGACGYGNMYSTGYGTNTAALSTALFNGGAACGSCYELRCDNDGQSCLPGTITVTATN 382
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKG 407
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCVKKG
Sbjct: 383 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKG 544
Score = 174 bits (374), Expect = 2e-042
Identities = 77/94 (81%), Positives = 78/94 (82%)
Frame = -2 / -3
Query: 406 PFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTV 227
PFFTHGTLL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTV
Sbjct: 543 PFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTV 364
Query: 226 MVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
MVPG *QDPHAAP LNSAVLSAA
Sbjct: 363 MVPGRHDCPSLSQRSS*QDPHAAPPLNSAVLSAA 262
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 276 bits (597), Expect = 4e-073
Identities = 106/111 (95%), Positives = 107/111 (96%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYSTGYGT+TAALSTALFNDGAACGSCYELRCDN GR CLPGTITVTATN
Sbjct: 247 TMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAGRSCLPGTITVTATN 426
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCV 398
FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFL IAQYRAGIVPVAFRRVPCV
Sbjct: 427 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCV 579
Score = 177 bits (380), Expect = 3e-043
Identities = 78/92 (84%), Positives = 78/92 (84%)
Frame = -2 / -1
Query: 400 FTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 221
FTHGTLL ATGTMPARYCAM RKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV
Sbjct: 581 FTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 402
Query: 220 PGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
PG *QDPHAAPSLNSAVLSAA
Sbjct: 401 PGRHDRPALSHRSS*QDPHAAPSLNSAVLSAA 306
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 275 bits (594), Expect = 1e-072
Identities = 103/111 (92%), Positives = 109/111 (98%)
Frame = +3 / +2
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 215 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 394
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCV 398
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RRVPCV
Sbjct: 395 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCV 547
Score = 167 bits (360), Expect = 2e-040
Identities = 75/91 (82%), Positives = 76/91 (83%)
Frame = -2 / -3
Query: 397 THGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 218
THGTLL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP
Sbjct: 546 THGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 367
Query: 217 GXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
G *QDPHAAPSLNSAVLSAA
Sbjct: 366 GRHDCPSLSQRSS*QDPHAAPSLNSAVLSAA 274
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 272 bits (589), Expect = 5e-072
Identities = 102/111 (91%), Positives = 108/111 (97%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 208 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 387
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCV 398
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+R VPCV
Sbjct: 388 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYREVPCV 540
Score = 165 bits (354), Expect = 1e-039
Identities = 74/91 (81%), Positives = 75/91 (82%)
Frame = -2 / -3
Query: 397 THGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 218
THGT L ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP
Sbjct: 539 THGTSL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 360
Query: 217 GXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
G *QDPHAAPSLNSAVLSAA
Sbjct: 359 GRHDCPSLSQRSS*QDPHAAPSLNSAVLSAA 267
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 266 bits (576), Expect = 3e-070
Identities = 103/109 (94%), Positives = 104/109 (95%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYSTGYGT+TAALSTALFNDGAACGSCYELRCDN GR CLPGTITVTATN
Sbjct: 237 TMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAGRSCLPGTITVTATN 416
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVP 392
FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFL IAQYRAGIVPVAFRR P
Sbjct: 417 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRR*P 563
Score = 165 bits (354), Expect = 1e-039
Identities = 74/89 (83%), Positives = 74/89 (83%)
Frame = -2 / -3
Query: 391 GTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGX 212
G LL ATGTMPARYCAM RKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 562 GYLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 383
Query: 211 XXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 382 HDRPALSHRSS*QDPHAAPSLNSAVLSAA 296
>gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 634
Score = 264 bits (572), Expect = 1e-069
Identities = 102/107 (95%), Positives = 103/107 (96%)
Frame = +3 / +1
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFC 251
GGACGYGNLYSTGYGT+TAALSTALFNDGAACGSCYELRCDN GR CLPGTITVTATNFC
Sbjct: 40 GGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAGRSCLPGTITVTATNFC 219
Query: 252 PPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVP 392
PPNYGLPSDDGGWCNPPRPHFDMAEPAFL IAQYRAGIVPVAFRR P
Sbjct: 220 PPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRR*P 360
Score = 165 bits (354), Expect = 1e-039
Identities = 74/89 (83%), Positives = 74/89 (83%)
Frame = -2 / -3
Query: 391 GTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGX 212
G LL ATGTMPARYCAM RKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 359 GYLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 180
Query: 211 XXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 179 HDRPALSHRSS*QDPHAAPSLNSAVLSAA 93
>gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 550
Score = 262 bits (566), Expect = 8e-069
Identities = 98/105 (93%), Positives = 104/105 (99%)
Frame = +3 / +2
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFC 251
GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATNFC
Sbjct: 95 GGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATNFC 274
Query: 252 PPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRR 386
PPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RR
Sbjct: 275 PPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 409
Score = 156 bits (336), Expect = 4e-037
Identities = 71/87 (81%), Positives = 72/87 (82%)
Frame = -2 / -2
Query: 385 LLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXX 206
LL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 408 LL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHD 229
Query: 205 XXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 228 CPSLSQRSS*QDPHAAPSLNSAVLSAA 148
>gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i03, DNA
sequence
Length = 641
Score = 262 bits (566), Expect = 8e-069
Identities = 98/105 (93%), Positives = 104/105 (99%)
Frame = +3 / -3
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFC 251
GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATNFC
Sbjct: 540 GGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATNFC 361
Query: 252 PPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRR 386
PPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RR
Sbjct: 360 PPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 226
Score = 156 bits (336), Expect = 4e-037
Identities = 71/87 (81%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 385 LLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXX 206
LL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 227 LL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHD 406
Query: 205 XXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 407 CPSLSQRSS*QDPHAAPSLNSAVLSAA 487
>gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047d01, DNA
sequence
Length = 642
Score = 262 bits (566), Expect = 8e-069
Identities = 98/105 (93%), Positives = 104/105 (99%)
Frame = +3 / -2
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFC 251
GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATNFC
Sbjct: 344 GGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATNFC 165
Query: 252 PPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRR 386
PPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RR
Sbjct: 164 PPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 30
Score = 156 bits (336), Expect = 4e-037
Identities = 71/87 (81%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 385 LLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXX 206
LL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 31 LL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHD 210
Query: 205 XXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 211 CPSLSQRSS*QDPHAAPSLNSAVLSAA 291
>gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 5', mRNA sequence
Length = 665
Score = 179 bits (386), Expect(3) = 3e-067
Identities = 67/83 (80%), Positives = 74/83 (89%)
Frame = +3 / +1
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV++RRVPC K
Sbjct: 415 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 594
Query: 402 KGGIRFTINGHSYFNLVLVTNVA 470
GG+RFTING YFNLVL+TNVA
Sbjct: 595 SGGVRFTINGFRYFNLVLITNVA 663
Score = 130 bits (279), Expect(2) = 1e-031
Identities = 60/83 (72%), Positives = 60/83 (72%)
Frame = -2 / -1
Query: 472 PATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGL 293
PAT V STRLK PLMVNR PP F HGT TGTMPARY AM R G A SKCGRGGL
Sbjct: 665 PATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGL 486
Query: 292 HQPPSSLGRP*LGGQKLVAVTVM 224
HQPPSS G * GGQKLVAVT M
Sbjct: 485 HQPPSSEGSA*FGGQKLVAVTRM 417
Score = 94.5 bits (200), Expect(3) = 3e-067
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRW 209
T GGACGYGNLYS GYG + AALSTALFN+G +CG+C+EL+C+N W
Sbjct: 247 TMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGACFELKCENQPGW 390
Score = 27.6 bits (54), Expect(2) = 1e-031
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 169 PHAAPSLNSAVLSAA 125
P PSLNSAVLSAA
Sbjct: 350 PQLRPSLNSAVLSAA 306
Score = 22.1 bits (42), Expect(3) = 3e-067
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 204 RWCLPGTITVTAT 242
RWC PG+ ++ T
Sbjct: 391 RWCRPGSPSILVT 429
>gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_F04_A002 5', mRNA sequence
Length = 794
Score = 182 bits (393), Expect(2) = 3e-065
Identities = 69/124 (55%), Positives = 91/124 (73%)
Frame = +3 / +1
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFC PNYGLP+D GG CNPP HF + +F +IA ++AGI+P+ +RRV C++
Sbjct: 421 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 600
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQ 581
+GG+RF++NG +F VL++NV GAGDVRSV I+G+ GW M RNWGQ W N + Q
Sbjct: 601 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLSMGRNWGQVWHINCDMRGQ 780
Query: 582 ALSF 593
LSF
Sbjct: 781 PLSF 792
Score = 98.7 bits (209), Expect(2) = 4e-024
Identities = 52/123 (42%), Positives = 62/123 (50%)
Frame = -2 / -1
Query: 592 NESACLSRYELLCQFWPQFRDMGCHPVREPRMETERTSPAPATLVTSTRLK*ECPLMVNR 413
N+ C +L+C WPQ R + HP P + T+ TSPAP TL+ T K PL N
Sbjct: 791 NDRGCPLMSQLMCHTWPQLRPIESHPNSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 612
Query: 412 MPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAV 233
PP H T G MPA A+ K GGL PP+S GRP* G QKLVAV
Sbjct: 611 TPPSRRHLTRRYWMGMMPAFQSAIFSNDWMGRRKWWLGGLQWPPASAGRP*FGAQKLVAV 432
Query: 232 TVM 224
T +
Sbjct: 431 TTI 423
Score = 88.1 bits (186), Expect(2) = 3e-065
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +3 / +1
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITV 233
GGACG+G+L GYG +T LSTALF GAACG CYE++C D ++CLPGT V
Sbjct: 268 GGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVKDLKYCLPGTSIV 429
Score = 34.5 bits (69), Expect(2) = 4e-024
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -2 / -1
Query: 244 LVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLS 131
+ T+ VPG *Q PHAAP NSAVLS
Sbjct: 440 VAVTTIEVPGRQYLRSLTHLTS*QPPHAAPRSNSAVLS 327
>gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 247 bits (534), Expect = 2e-064
Identities = 96/101 (95%), Positives = 97/101 (96%)
Frame = +3 / +1
Query: 90 GNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFCPPNYGL 269
GNLYSTGYGT+TAALSTALFNDGAACGSCYELRCDN GR CLPGTITVTATNFCPPNYGL
Sbjct: 10 GNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAGRSCLPGTITVTATNFCPPNYGL 189
Query: 270 PSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVP 392
PSDDGGWCNPPRPHFDMAEPAFL IAQYRAGIVPVAFRR P
Sbjct: 190 PSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRR*P 312
Score = 165 bits (354), Expect = 1e-039
Identities = 74/89 (83%), Positives = 74/89 (83%)
Frame = -2 / -2
Query: 391 GTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGX 212
G LL ATGTMPARYCAM RKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 311 GYLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 132
Query: 211 XXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 131 HDRPALSHRSS*QDPHAAPSLNSAVLSAA 45
>gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_A06_A002 5', mRNA sequence
Length = 520
Score = 247 bits (534), Expect = 2e-064
Identities = 92/99 (92%), Positives = 97/99 (97%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGN+YSTGYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATN
Sbjct: 222 TMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATN 401
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAG 362
FCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAG
Sbjct: 402 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAG 518
Score = 145 bits (312), Expect = 8e-034
Identities = 65/80 (81%), Positives = 66/80 (82%)
Frame = -2 / -1
Query: 364 MPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXX 185
MPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 520 MPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCPSLSQR 341
Query: 184 XX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 340 SS*QDPHAAPSLNSAVLSAA 281
>gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079i10, DNA
sequence
Length = 564
Score = 128 bits (275), Expect(3) = 5e-064
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3 / +3
Query: 210 CLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRR 386
CLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM++P F RIA YRAGIVPV++RR
Sbjct: 156 CLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 332
Score = 93.2 bits (197), Expect(3) = 5e-064
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3 / +3
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDG 203
GGACGYGNLYS GYGT+TAALSTALFN G +CG+C+E+RCD G
Sbjct: 9 GGACGYGNLYSQGYGTNTAALSTALFNSGLSCGACFEVRCDAAG 140
Score = 76.7 bits (161), Expect(3) = 1e-025
Identities = 36/53 (67%), Positives = 36/53 (67%)
Frame = -2 / -3
Query: 373 TGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 215
TGTMPA AMR G MSK RGGLHQPPSS G LGGQKLVAVT PG
Sbjct: 319 TGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTTTEPG 161
Score = 67.0 bits (140), Expect(3) = 5e-064
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3 / +2
Query: 384 RVPCVKKGGIRFTINGHSYFNLVLVTNVAG 473
RV C KKGGIRFTINGHSYFNLVLVTNV G
Sbjct: 473 RVACNKKGGIRFTINGHSYFNLVLVTNVGG 562
Score = 59.3 bits (123), Expect(3) = 1e-025
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 475 APATLVTSTRLK*ECPLMVNRMPPFFTHGTL 383
AP TLVTSTRLK*E PL+VNRMPPF H TL
Sbjct: 564 APPTLVTSTRLK*EWPLIVNRMPPFLLHATL 472
Score = 23.5 bits (45), Expect(3) = 1e-025
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 175 QDPHAAPSLNSAVLSAA 125
Q P P L SAVLSAA
Sbjct: 112 QAPQLRPLLKSAVLSAA 62
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 154 bits (330), Expect(3) = 6e-064
Identities = 58/122 (47%), Positives = 82/122 (67%)
Frame = +3 / -1
Query: 279 DGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLV 458
+GGWC P RPHFDM++P++ +I + GI+PV +++V C + GG+RF I G SYF LV +
Sbjct: 442 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 263
Query: 459 TNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGA 638
N+ G+G V + ++G+ TGW MSRNWG NWQ+ S L QALSF VT + G+ +
Sbjct: 262 QNLGGSGSVGAAWVKGTNTGWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNV 83
Query: 639 VP 644
P
Sbjct: 82 AP 77
Score = 86.8 bits (183), Expect(3) = 7e-023
Identities = 50/134 (37%), Positives = 56/134 (41%)
Frame = -2 / +3
Query: 682 WPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREP 503
W V PNC G P + VT SA E CQ PQF D+ HPV P
Sbjct: 39 WLVE*VCPNCHHVGATFRNCMYCPPVVVTAKLSAWPVSPERACQLAPQFLDIWIHPVLVP 218
Query: 502 RMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGS 323
+ T P P T K* P M+ R PP H T +TG MP + G
Sbjct: 219 LTQAAPTEPLPPRFWMLTSRK*LEPAMLKRTPPLREHLTCWYSTGMMPPWTTPIFSHDGC 398
Query: 322 AMSKCGRGGLHQPP 281
MSKCGR G H PP
Sbjct: 399 DMSKCGRPGPHHPP 440
Score = 86.8 bits (183), Expect(3) = 6e-064
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3 / -1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
T GGACGYGNLYS GYG + AALS LFNDGA+CG CY + CD
Sbjct: 661 TMGGACGYGNLYSAGYGVNNAALSQTLFNDGASCGQCYTITCD 533
Score = 44.6 bits (91), Expect(3) = 6e-064
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / -1
Query: 222 TITVTATNFCPPNYGLPS 275
T+TVTATN CPPNYGLP+
Sbjct: 493 TVTVTATNLCPPNYGLPN 440
Score = 31.8 bits (63), Expect(3) = 7e-023
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 274 LGRP*LGGQKLVAVTVMV 221
LG P*LGG +LVAVTV V
Sbjct: 441 LGSP*LGGHRLVAVTVTV 494
Score = 28.1 bits (55), Expect(3) = 7e-023
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 169 PHAAPSLNSAVLSAA 125
PH APSLNS LSAA
Sbjct: 558 PHDAPSLNSVWLSAA 602
>gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221289, DNA
sequence
Length = 616
Score = 155 bits (332), Expect(3) = 1e-062
Identities = 55/88 (62%), Positives = 74/88 (84%)
Frame = +3 / +1
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+ITVTATN CPPN+ +++GGWCNPPR HFD+++PAF+++AQ+RAGIVPV +RRVPCV+
Sbjct: 199 SITVTATNLCPPNWAQDTNNGGWCNPPRTHFDLSKPAFMKMAQWRAGIVPVMYRRVPCVR 378
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDV 485
+GG+RF + G+ Y+ L V NV GAGDV
Sbjct: 379 RGGLRFALQGNPYWLLAYVMNVGGAGDV 462
Score = 95.5 bits (202), Expect(2) = 1e-020
Identities = 45/87 (51%), Positives = 53/87 (60%)
Frame = -2 / -3
Query: 484 TSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCG 305
TSPAP T +T +* P NR PP T GT TGT+PAR+CA+ KAG SK
Sbjct: 461 TSPAPPTFITYASSQ*GFPWSANRRPPLRTQGTRRYMTGTIPARHCAIFMKAGLERSKWV 282
Query: 304 RGGLHQPPSSLGRP*LGGQKLVAVTVM 224
RGGLH PP + LGG +LVAVTV+
Sbjct: 281 RGGLHHPPLLVSCAQLGGHRLVAVTVI 201
Score = 91.3 bits (193), Expect(3) = 1e-062
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3 / +1
Query: 57 RARTTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRC 191
R TGGACGYGNLY+TGYGT TAALST LF DG CG+CY++RC
Sbjct: 31 RRLPTGGACGYGNLYATGYGTDTAALSTTLFKDGHGCGTCYQIRC 165
Score = 35.0 bits (70), Expect(3) = 1e-062
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3 / +1
Query: 507 SRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTA 605
S W M+ NWG +Q+ + L +ALSF+VT+
Sbjct: 490 SSCAWIRMTHNWGAAYQAFAQLGGKALSFKVTS 588
Score = 26.3 bits (51), Expect(2) = 1e-020
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 169 PHAAPSLNSAVLSAA 125
P PSLNS VLSAA
Sbjct: 143 PQPCPSLNSVVLSAA 99
>gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137329, DNA
sequence
Length = 593
Score = 237 bits (513), Expect = 2e-061
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -2 / -3
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW PSKVWPNC PAG A LLVTVRPSLAVTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 558 QNWAPSKVWPNCHPAGAALLLVTVRPSLAVTWNDSACPSRSALLCQFWPQFRDMGCHPVR 379
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 383
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL
Sbjct: 378 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 253
Score = 202 bits (435), Expect(2) = 4e-054
Identities = 83/88 (94%), Positives = 84/88 (95%)
Frame = +3 / +2
Query: 384 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 563
RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN
Sbjct: 254 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 433
Query: 564 SYLDRQALSFQVTASDGRTVTSNGAVPA 647
+ LD QALSFQVTASDGRTVTSN A PA
Sbjct: 434 ADLDGQALSFQVTASDGRTVTSNNAAPA 517
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +1 / +3
Query: 385 ECXXXXXXXXXXXXXXXXXXXWCW*PTWRAPATCAPSPSGAPARGGSPC 531
EC WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 255 ECRA*RRAASGSPSTGTPTSTWCW*PTWRARGTCGPSPSGARGRGGSPC 401
Score = 55.6 bits (115), Expect(2) = 2e-021
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / +1
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG+AGA+VPG
Sbjct: 385 GVAAHVAELGPELAEQRGPGRAGAVVPG 468
Score = 31.8 bits (63), Expect(2) = 4e-054
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +1
Query: 650 LAVRPDLRGRPVL 688
+AVRPDLRGRPVL
Sbjct: 520 MAVRPDLRGRPVL 558
>gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 692
Score = 237 bits (513), Expect = 2e-061
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -2 / +1
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW PSKVWPNC PAG A LLVTVRPSLAVTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 196 QNWAPSKVWPNCHPAGAALLLVTVRPSLAVTWNDSACPSRSALLCQFWPQFRDMGCHPVR 375
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 383
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL
Sbjct: 376 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 501
Score = 202 bits (435), Expect(2) = 4e-054
Identities = 83/88 (94%), Positives = 84/88 (95%)
Frame = +3 / -1
Query: 384 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 563
RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN
Sbjct: 500 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 321
Query: 564 SYLDRQALSFQVTASDGRTVTSNGAVPA 647
+ LD QALSFQVTASDGRTVTSN A PA
Sbjct: 320 ADLDGQALSFQVTASDGRTVTSNNAAPA 237
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +1 / -2
Query: 385 ECXXXXXXXXXXXXXXXXXXXWCW*PTWRAPATCAPSPSGAPARGGSPC 531
EC WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 499 ECRA*RRAASGSPSTGTPTSTWCW*PTWRARGTCGPSPSGARGRGGSPC 353
Score = 55.6 bits (115), Expect(2) = 2e-021
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / -3
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG+AGA+VPG
Sbjct: 369 GVAAHVAELGPELAEQRGPGRAGAVVPG 286
Score = 31.8 bits (63), Expect(2) = 4e-054
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -3
Query: 650 LAVRPDLRGRPVL 688
+AVRPDLRGRPVL
Sbjct: 234 MAVRPDLRGRPVL 196
>gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519350, DNA
sequence
Length = 558
Score = 227 bits (490), Expect(2) = 2e-061
Identities = 89/98 (90%), Positives = 91/98 (92%)
Frame = -2 / -3
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW PSKVWPNC PAG A LLVTVRPSLAVTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 295 QNWAPSKVWPNCHPAGAALLLVTVRPSLAVTWNDSACPSRSALLCQFWPQFRDMGCHPVR 116
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFT 395
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRMPPFFT
Sbjct: 115 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRMPPFFT 2
Score = 190 bits (410), Expect(3) = 7e-053
Identities = 79/84 (94%), Positives = 80/84 (95%)
Frame = +3 / +3
Query: 396 VKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLD 575
VKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN+ LD
Sbjct: 3 VKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLD 182
Query: 576 RQALSFQVTASDGRTVTSNGAVPA 647
QALSFQVTASDGRTVTSN A PA
Sbjct: 183 GQALSFQVTASDGRTVTSNNAAPA 254
Score = 68.4 bits (143), Expect(4) = 6e-031
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 55 WCW*PTWRARGTCGPSPSGARGRGGSPC 138
Score = 55.6 bits (115), Expect(4) = 6e-031
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / +2
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG+AGA+VPG
Sbjct: 122 GVAAHVAELGPELAEQRGPGRAGAVVPG 205
Score = 42.8 bits (87), Expect(4) = 6e-031
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2 / +2
Query: 395 REEGRHPVHHQRALLL 442
REEGRHPVHHQRALLL
Sbjct: 2 REEGRHPVHHQRALLL 49
Score = 33.1 bits (66), Expect(2) = 2e-061
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -1 / -3
Query: 923 TSRRVLD*QPQHSAR 879
T+RRVLD*QPQHSA+
Sbjct: 553 TTRRVLD*QPQHSAK 509
Score = 31.8 bits (63), Expect(3) = 7e-053
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +2
Query: 650 LAVRPDLRGRPVL 688
+AVRPDLRGRPVL
Sbjct: 257 MAVRPDLRGRPVL 295
Score = 29.0 bits (57), Expect(3) = 7e-053
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 883 ALC*GC*SSTRLDV 924
ALC*GC*SSTRL V
Sbjct: 513 ALC*GC*SSTRLVV 554
Score = 28.1 bits (55), Expect(4) = 6e-031
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 884 RYAEAANLAPA* 919
RYAEAANLAPA*
Sbjct: 514 RYAEAANLAPA* 549
>gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 673
Score = 227 bits (490), Expect(2) = 2e-061
Identities = 89/98 (90%), Positives = 91/98 (92%)
Frame = -2 / -2
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW PSKVWPNC PAG A LLVTVRPSLAVTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 294 QNWAPSKVWPNCHPAGAALLLVTVRPSLAVTWNDSACPSRSALLCQFWPQFRDMGCHPVR 115
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFT 395
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRMPPFFT
Sbjct: 114 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRMPPFFT 1
Score = 190 bits (410), Expect(3) = 1e-052
Identities = 79/84 (94%), Positives = 80/84 (95%)
Frame = +3 / +2
Query: 396 VKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLD 575
VKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN+ LD
Sbjct: 2 VKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLD 181
Query: 576 RQALSFQVTASDGRTVTSNGAVPA 647
QALSFQVTASDGRTVTSN A PA
Sbjct: 182 GQALSFQVTASDGRTVTSNNAAPA 253
Score = 68.4 bits (143), Expect(4) = 1e-030
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 54 WCW*PTWRARGTCGPSPSGARGRGGSPC 137
Score = 55.6 bits (115), Expect(4) = 1e-030
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / +1
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG+AGA+VPG
Sbjct: 121 GVAAHVAELGPELAEQRGPGRAGAVVPG 204
Score = 42.8 bits (87), Expect(4) = 1e-030
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2 / +1
Query: 395 REEGRHPVHHQRALLL 442
REEGRHPVHHQRALLL
Sbjct: 1 REEGRHPVHHQRALLL 48
Score = 33.1 bits (66), Expect(2) = 2e-061
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 923 TSRRVLD*QPQHSAR 879
T+RRVLD*QPQHSA+
Sbjct: 553 TTRRVLD*QPQHSAK 509
Score = 31.8 bits (63), Expect(3) = 1e-052
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +1
Query: 650 LAVRPDLRGRPVL 688
+AVRPDLRGRPVL
Sbjct: 256 MAVRPDLRGRPVL 294
Score = 29.0 bits (57), Expect(3) = 1e-052
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 883 ALC*GC*SSTRLDV 924
ALC*GC*SSTRL V
Sbjct: 513 ALC*GC*SSTRLVV 554
Score = 28.1 bits (55), Expect(4) = 1e-030
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 884 RYAEAANLAPA* 919
RYAEAANLAPA*
Sbjct: 514 RYAEAANLAPA* 549
>gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f070m01, DNA
sequence
Length = 339
Score = 236 bits (509), Expect = 6e-061
Identities = 92/102 (90%), Positives = 95/102 (93%)
Frame = -2 / -2
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW PSKVWP+C PAG A LLVTVRPSLAVTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 317 QNWAPSKVWPSCHPAGAALLLVTVRPSLAVTWNDSACRSRSALLCQFWPQFRDMGCHPVR 138
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 383
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL
Sbjct: 137 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 12
Score = 205 bits (442), Expect(2) = 2e-053
Identities = 84/88 (95%), Positives = 85/88 (96%)
Frame = +3 / +1
Query: 384 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 563
RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN
Sbjct: 13 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 192
Query: 564 SYLDRQALSFQVTASDGRTVTSNGAVPA 647
+ LDRQALSFQVTASDGRTVTSN A PA
Sbjct: 193 ADLDRQALSFQVTASDGRTVTSNNAAPA 276
Score = 68.9 bits (144), Expect(2) = 3e-021
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +1 / +2
Query: 385 ECXXXXXXXXXXXXXXXXXXXWCW*PTWRAPATCAPSPSGAPARGGSPC 531
EC WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 14 ECRA*RRAASGSPSTGTPTSTWCW*PTWRARGTCGPSPSGARGRGGSPC 160
Score = 54.7 bits (113), Expect(2) = 3e-021
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +2 / +3
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG AGA+VPG
Sbjct: 144 GVAAHVAELGPELAEQRGPGPAGAVVPG 227
Score = 25.8 bits (50), Expect(2) = 2e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 650 LAVRPDLRGRPVL 688
+A RP LRGRPVL
Sbjct: 279 MAARPYLRGRPVL 317
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 153 bits (328), Expect(3) = 1e-060
Identities = 60/122 (49%), Positives = 82/122 (67%)
Frame = +3 / -2
Query: 279 DGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLV 458
+GGWC P RPHFDM++PA+ I +AGI+PV +++V C + GG+RF+I G YF LV +
Sbjct: 408 NGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNI 229
Query: 459 TNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGA 638
NV G+G V + ++G +TGW MSRNWG NWQ+ S L Q LSF VT + G+ +
Sbjct: 228 QNVGGSGAVGAAWVKGDKTGWIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYV 49
Query: 639 VP 644
VP
Sbjct: 48 VP 43
Score = 97.7 bits (207), Expect(3) = 1e-024
Identities = 52/130 (40%), Positives = 60/130 (46%)
Frame = -2 / +2
Query: 670 KVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVREPRMET 491
KV PNC GT + P + VT S + + CQ PQF D+ HPV P +
Sbjct: 17 KVMPNCHHPGTTYMNCRYCPPVVVTAKLSPWPTSPDSACQLAPQFLDIWIHPVLSPFTQA 196
Query: 490 ERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSK 311
T+P P T T K P M+ R PP H T TG MPA M AG MSK
Sbjct: 197 APTAPLPPTFWMLTSRKYWEPAMLKRTPPVRVHLTCWYRTGMMPACTTPMCSHAGCDMSK 376
Query: 310 CGRGGLHQPP 281
CGR G H PP
Sbjct: 377 CGRPGPHHPP 406
Score = 79.9 bits (168), Expect(3) = 1e-060
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3 / -2
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
GGACGYGNLY+ GYG + AALS LFN+GA+CG CY + CD
Sbjct: 621 GGACGYGNLYNAGYGINNAALSQTLFNNGASCGQCYLITCD 499
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 222 TITVTATNFCPPNYGLPS 275
+ITV+ATN CPPNYGLP+
Sbjct: 459 SITVSATNLCPPNYGLPN 406
Score = 29.5 bits (58), Expect(3) = 1e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 274 LGRP*LGGQKLVAVTVM 224
LG P*LGG +LVA TVM
Sbjct: 407 LGSP*LGGHRLVADTVM 457
Score = 25.4 bits (49), Expect(3) = 1e-024
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 169 PHAAPSLNSAVLSAA 125
PH AP LNS LSAA
Sbjct: 524 PHDAPLLNSVWLSAA 568
>gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889911, DNA
sequence
Length = 766
Score = 234 bits (505), Expect = 2e-060
Identities = 92/102 (90%), Positives = 94/102 (92%)
Frame = -2 / +1
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW SKVWPNC PAG A LLVTVRPSLAVTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 94 QNWASSKVWPNCHPAGAALLLVTVRPSLAVTWNDSACPSRSALLCQFWPQFRDMGCHPVR 273
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 383
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL
Sbjct: 274 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRMPPFFTHGTL 399
Score = 202 bits (435), Expect(2) = 4e-054
Identities = 83/88 (94%), Positives = 84/88 (95%)
Frame = +3 / -3
Query: 384 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 563
RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN
Sbjct: 398 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 219
Query: 564 SYLDRQALSFQVTASDGRTVTSNGAVPA 647
+ LD QALSFQVTASDGRTVTSN A PA
Sbjct: 218 ADLDGQALSFQVTASDGRTVTSNNAAPA 135
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +1 / -1
Query: 385 ECXXXXXXXXXXXXXXXXXXXWCW*PTWRAPATCAPSPSGAPARGGSPC 531
EC WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 397 ECRA*RRAASGSPSTGTPTSTWCW*PTWRARGTCGPSPSGARGRGGSPC 251
Score = 55.6 bits (115), Expect(2) = 2e-021
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / -2
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG+AGA+VPG
Sbjct: 267 GVAAHVAELGPELAEQRGPGRAGAVVPG 184
Score = 31.8 bits (63), Expect(2) = 4e-054
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -2
Query: 650 LAVRPDLRGRPVL 688
+AVRPDLRGRPVL
Sbjct: 132 MAVRPDLRGRPVL 94
>gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499499, DNA
sequence
Length = 624
Score = 234 bits (505), Expect = 2e-060
Identities = 89/101 (88%), Positives = 95/101 (94%)
Frame = +3 / -1
Query: 84 GYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATNFCPPNY 263
G G + GYGT+TAALSTALFNDGAACGSCYELRCDNDG+ CLPGTITVTATNFCPPNY
Sbjct: 603 GTGTCTARGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGTITVTATNFCPPNY 424
Query: 264 GLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRR 386
GLPSDDGGWCNPPRPHFDMA+PAFL+IAQYRAGIVPVA+RR
Sbjct: 423 GLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 301
Score = 156 bits (336), Expect = 4e-037
Identities = 71/87 (81%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 385 LLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXX 206
LL ATGTMPARYCA+ RKAG AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG
Sbjct: 302 LL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHD 481
Query: 205 XXXXXXXXX*QDPHAAPSLNSAVLSAA 125
*QDPHAAPSLNSAVLSAA
Sbjct: 482 CPSLSQRSS*QDPHAAPSLNSAVLSAA 562
>gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_D09_A002 5', mRNA sequence
Length = 727
Score = 137 bits (293), Expect(3) = 9e-060
Identities = 48/77 (62%), Positives = 63/77 (81%)
Frame = +3 / +1
Query: 279 DGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLV 458
+GGWCN RPHFDMA+PAF +I Y GI+PV ++RVPCVK+GG+RF++NGH Y NLVLV
Sbjct: 493 EGGWCNQHRPHFDMAQPAFEKIGVYSGGIIPVMYKRVPCVKRGGVRFSVNGHDYINLVLV 672
Query: 459 TNVAGAGDVRSVSIRGS 509
TNVA AG ++S+ ++ S
Sbjct: 673 TNVAAAGSIKSMEVKTS 723
Score = 93.6 bits (198), Expect(3) = 9e-060
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
T GGACGYGNLYS GYGT TAALST LFNDGA+CG CY++ CD
Sbjct: 274 TMGGACGYGNLYSQGYGTRTAALSTVLFNDGASCGQCYKIACD 402
Score = 90.9 bits (192), Expect(3) = 6e-022
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = -2 / -3
Query: 478 PAPATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRG 299
PA ATLVTSTRL * PL +N PP FT GTLL TG +P Y + AG AMSKCGR
Sbjct: 692 PAAATLVTSTRLM*SWPLTLNLTPPRFTQGTLLYMTGIIPPLYTPIFSNAGCAMSKCGRC 513
Query: 298 GLHQPPS 278
LHQPPS
Sbjct: 512 *LHQPPS 492
Score = 40.5 bits (82), Expect(3) = 9e-060
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / +1
Query: 222 TITVTATNFCPPNYGLP 272
T+TVTATNFCPPN LP
Sbjct: 442 TVTVTATNFCPPNMALP 492
Score = 26.7 bits (52), Expect(3) = 6e-022
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 169 PHAAPSLNSAVLSAA 125
PH APSL VLSAA
Sbjct: 377 PHEAPSLKRTVLSAA 333
Score = 25.8 bits (50), Expect(3) = 6e-022
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 259 LGGQKLVAVTVMV 221
LGGQK VAVTV V
Sbjct: 479 LGGQKFVAVTVTV 441
>gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103n01, DNA
sequence
Length = 667
Score = 153 bits (329), Expect(3) = 6e-059
Identities = 58/122 (47%), Positives = 82/122 (67%)
Frame = +3 / -1
Query: 279 DGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLV 458
+GGWC P RPHFDM++PA+ I Y AG+VPV +++V C + GG+RF++ G YF LV +
Sbjct: 367 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 188
Query: 459 TNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGA 638
N+ G+G V + ++G +TGW MSRNWG NWQ+ + L Q LSF VT + G+ +
Sbjct: 187 QNLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 8
Query: 639 VP 644
VP
Sbjct: 7 VP 2
Score = 79.9 bits (168), Expect(3) = 6e-059
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3 / -1
Query: 69 TGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
TGGACGY NLY+ GYG + AAL LFNDGA+CG CY + CD
Sbjct: 583 TGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCD 458
Score = 35.0 bits (70), Expect(3) = 6e-059
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / -1
Query: 222 TITVTATNFCPPNYGLPS 275
+ITV+ATN CP NY LP+
Sbjct: 418 SITVSATNLCPSNYALPN 365
>gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D07_A002 5', mRNA sequence
Length = 741
Score = 161 bits (346), Expect(2) = 1e-058
Identities = 60/109 (55%), Positives = 81/109 (74%)
Frame = +3 / +2
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVK 401
+I VTATNFC PNYGLP+D GG CNPP HF + +F +IA ++AGI+P+ +RRV C++
Sbjct: 413 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLQ 592
Query: 402 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQ 548
+GG+RF++NG F VL++NV+ DVRSV I+G+ GW M RNWGQ
Sbjct: 593 EGGVRFSVNGRHIFFTVLISNVSSTCDVRSVKIKGTELGWLSMGRNWGQ 739
Score = 87.2 bits (184), Expect(2) = 1e-058
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = +3 / +2
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITV 233
GGACG+G+L GYG +T LSTALF GAACG CYE++C D +CLPGT V
Sbjct: 260 GGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLEYCLPGTSIV 421
>gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f181j14, DNA
sequence
Length = 508
Score = 160 bits (344), Expect(2) = 3e-058
Identities = 56/96 (58%), Positives = 77/96 (80%)
Frame = +3 / +3
Query: 219 GTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCV 398
G +TV+ATN CPPNY +GGWCNPPR HFDM++PA+L+I Y+ GI+PV ++RVPCV
Sbjct: 219 GPVTVSATNLCPPNYAYSGSNGGWCNPPRAHFDMSQPAWLKIGIYQGGIIPVLYQRVPCV 398
Query: 399 KKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRG 506
K+GG+RFTI G +++ LVL++NVAG+G V S ++G
Sbjct: 399 KQGGVRFTITGFNHYELVLISNVAGSGSVASAWVQG 506
Score = 87.2 bits (184), Expect(2) = 3e-058
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +3 / +3
Query: 57 RARTTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
R +GGACGYGNLY+TGYG TAALS L+NDGA+CG CY++ CD
Sbjct: 45 RTFRSGGACGYGNLYATGYGQYTAALSQVLYNDGASCGQCYQISCD 182
>gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 5', mRNA sequence
Length = 816
Score = 153 bits (329), Expect(3) = 4e-058
Identities = 58/122 (47%), Positives = 82/122 (67%)
Frame = +3 / +3
Query: 279 DGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLV 458
+GGWC P RPHFDM++PA+ I Y AG+VPV +++V C + GG+RF++ G YF LV +
Sbjct: 447 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 626
Query: 459 TNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQVTASDGRTVTSNGA 638
N+ G+G V + ++G +TGW MSRNWG NWQ+ + L Q LSF VT + G+ +
Sbjct: 627 QNLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 806
Query: 639 VP 644
VP
Sbjct: 807 VP 812
Score = 79.4 bits (167), Expect(3) = 4e-058
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +3 / +3
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCD 194
T GGACGY NLY+ GYG + AAL LFNDGA+CG CY + CD
Sbjct: 228 TMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCD 356
Score = 32.7 bits (65), Expect(3) = 4e-058
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 228 TVTATNFCPPNYGLPS 275
TV+ATN CP NY LP+
Sbjct: 402 TVSATNLCPSNYALPN 449
>gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 226 bits (488), Expect = 4e-058
Identities = 85/90 (94%), Positives = 86/90 (95%)
Frame = +3 / +1
Query: 66 TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
T GGACGYGNLYSTGYGT+TAALSTALFNDGAACGSCYELRCDN R CLPGTITVTATN
Sbjct: 238 TMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAXRSCLPGTITVTATN 417
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAF 335
FCPPNYGLPSDDGGWCNPPRPHFDMAEPAF
Sbjct: 418 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAF 507
Score = 128 bits (275), Expect = 1e-028
Identities = 59/70 (84%), Positives = 59/70 (84%)
Frame = -2 / -3
Query: 334 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAP 155
KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG *QDPHAAP
Sbjct: 506 KAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDRXALSHRSS*QDPHAAP 327
Query: 154 SLNSAVLSAA 125
SLNSAVLSAA
Sbjct: 326 SLNSAVLSAA 297
>gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f009c21, DNA
sequence
Length = 689
Score = 145 bits (312), Expect(3) = 5e-057
Identities = 51/91 (56%), Positives = 70/91 (76%)
Frame = +3 / +2
Query: 282 GGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVT 461
GGWC PPRPHFDM++PA+ I Y AG++ V ++RV C K GG+RFTI G + F +VL+T
Sbjct: 296 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 475
Query: 462 NVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
NVAG+G ++S++++G+ T W PM RNWG NW
Sbjct: 476 NVAGSGSIQSMAVKGNSTDWIPMYRNWGANW 568
Score = 80.8 bits (170), Expect(3) = 5e-057
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
GGACGY +LY GYG + AALSTALFNDGA+CG CY + CD+
Sbjct: 65 GGACGYSDLYEQGYGINNAALSTALFNDGASCGQCYVIICDS 190
Score = 35.4 bits (71), Expect(3) = 5e-057
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 225 ITVTATNFCPPNYGLPS 275
+ V+ATNFCPPN+ LP+
Sbjct: 227 VVVSATNFCPPNWDLPA 277
>gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480451, DNA
sequence
Length = 683
Score = 145 bits (312), Expect(3) = 5e-057
Identities = 51/91 (56%), Positives = 70/91 (76%)
Frame = +3 / +1
Query: 282 GGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVT 461
GGWC PPRPHFDM++PA+ I Y AG++ V ++RV C K GG+RFTI G + F +VL+T
Sbjct: 358 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 537
Query: 462 NVAGAGDVRSVSIRGSRTGWQPMSRNWGQNW 554
NVAG+G ++S++++G+ T W PM RNWG NW
Sbjct: 538 NVAGSGSIQSMAVKGNSTDWIPMYRNWGANW 630
Score = 80.8 bits (170), Expect(3) = 5e-057
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 72 GGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDN 197
GGACGY +LY GYG + AALSTALFNDGA+CG CY + CD+
Sbjct: 127 GGACGYSDLYEQGYGINNAALSTALFNDGASCGQCYVIICDS 252
Score = 35.4 bits (71), Expect(3) = 5e-057
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3 / +1
Query: 225 ITVTATNFCPPNYGLPS 275
+ V+ATNFCPPN+ LP+
Sbjct: 289 VVVSATNFCPPNWDLPA 339
>gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 3', mRNA sequence
Length = 681
Score = 210 bits (454), Expect(2) = 2e-056
Identities = 83/93 (89%), Positives = 85/93 (91%)
Frame = -2 / -2
Query: 688 QNWPPSKVWPNCQPAGTAPLLVTVRPSLAVTWNESACLSRYELLCQFWPQFRDMGCHPVR 509
QNW PSKVWPNC PAG A LLVTVRPSL VTWN+SAC SR LLCQFWPQFRDMGCHPVR
Sbjct: 281 QNWAPSKVWPNCHPAGAALLLVTVRPSLEVTWNDSACPSRSALLCQFWPQFRDMGCHPVR 102
Query: 508 EPRMETERTSPAPATLVTSTRLK*ECPLMVNRM 410
EPRMET+RTSPAPATLVTSTRLK*ECPLMVNRM
Sbjct: 101 EPRMETDRTSPAPATLVTSTRLK*ECPLMVNRM 3
Score = 180 bits (387), Expect(3) = 1e-049
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = +3 / +1
Query: 408 GIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQAL 587
GIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN+ LD QAL
Sbjct: 1 GIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLDGQAL 180
Query: 588 SFQVTASDGRTVTSNGAVPA 647
SFQVT+SDGRTVTSN A PA
Sbjct: 181 SFQVTSSDGRTVTSNNAAPA 240
Score = 68.4 bits (143), Expect(4) = 3e-027
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 448 WCW*PTWRAPATCAPSPSGAPARGGSPC 531
WCW*PTWRA TC PSPSGA RGGSPC
Sbjct: 41 WCW*PTWRARGTCGPSPSGARGRGGSPC 124
Score = 55.6 bits (115), Expect(4) = 3e-027
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / +3
Query: 515 GVAAHVPELGPELAEQLVPGQAGALVPG 598
GVAAHV ELGPELAEQ PG+AGA+VPG
Sbjct: 108 GVAAHVAELGPELAEQRGPGRAGAVVPG 191
Score = 33.1 bits (66), Expect(2) = 2e-056
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 923 TSRRVLD*QPQHSAR 879
T+RRVLD*QPQHSA+
Sbjct: 540 TTRRVLD*QPQHSAK 496
Score = 31.8 bits (63), Expect(3) = 1e-049
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +3
Query: 650 LAVRPDLRGRPVL 688
+AVRPDLRGRPVL
Sbjct: 243 MAVRPDLRGRPVL 281
Score = 30.9 bits (61), Expect(4) = 3e-027
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 410 HPVHHQRALLL 442
HPVHHQRALLL
Sbjct: 3 HPVHHQRALLL 35
Score = 29.0 bits (57), Expect(3) = 1e-049
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 883 ALC*GC*SSTRLDV 924
ALC*GC*SSTRL V
Sbjct: 500 ALC*GC*SSTRLVV 541
Score = 28.1 bits (55), Expect(4) = 3e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 884 RYAEAANLAPA* 919
RYAEAANLAPA*
Sbjct: 501 RYAEAANLAPA* 536
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 816,177,306
Number of Sequences: 832831
Number of extensions: 10589217
Number of successful extensions: 117293
Number of sequences better than 1.0e-020: 197
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 33624542535
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)