TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3588987.2.1
(487 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD206192.1|CD206192 HS1_21_F03.b1_A012 Heat-shocked seed... 231 3e-074
gb|CF073438.1|CF073438 FE1_10_B08.b1_A002 Iron-deficient se... 231 3e-074
gb|CD225929.1|CD225929 CCC1_42_E11.b1_A007 Callus culture/c... 231 4e-074
gb|AW747621.1|AW747621 WS1_74_C09.g1_A002 Water-stressed 1 ... 210 1e-053
gb|AW923920.1|AW923920 WS1_30_B03.b1_A002 Water-stressed 1 ... 210 1e-053
gb|AW925011.1|AW925011 WS1_74_C09.b1_A002 Water-stressed 1 ... 210 1e-053
gb|BE598987.1|BE598987 PI1_86_A03.g1_A002 Pathogen induced ... 210 1e-053
gb|BG048518.1|BG048518 OV1_14_E09.g2_A002 Ovary 1 (OV1) Sor... 210 1e-053
gb|BG240707.1|BG240707 OV1_37_C06.g1_A002 Ovary 1 (OV1) Sor... 210 1e-053
gb|BG947049.1|BG947049 IP1_2_H09.g1_A002 Immature pannicle ... 210 1e-053
gb|CD424860.1|CD424860 SA1_9_E01.b1_A002 Salicylic acid-tre... 210 1e-053
gb|BG052764.1|BG052764 RHIZ2_14_E10.g1_A003 Rhizome2 (RHIZ2... 209 3e-053
gb|AW746098.1|AW746098 WS1_39_H03.b1_A002 Water-stressed 1 ... 207 8e-053
gb|AW679708.1|AW679708 WS1_30_B03.g1_A002 Water-stressed 1 ... 197 8e-050
gb|AW746132.1|AW746132 WS1_39_H03.g1_A002 Water-stressed 1 ... 194 6e-049
gb|CW063071.1|CW063071 104_308_10521699_1_30092 Sorghum met... 95 9e-049
gb|CW040788.1|CW040788 104_274_10506292_114_30470 Sorghum m... 95 1e-048
gb|BE364598.2|BE364598 PI1_15_B06.g1_A002 Pathogen induced ... 193 1e-048
gb|BE364817.2|BE364817 PI1_16_D01.g1_A002 Pathogen induced ... 190 1e-047
gb|CB929152.1|CB929152 ABA1_40_A09.b1_A012 Abscisic acid-tr... 186 2e-046
gb|BG273158.1|BG273158 OV2_27_E09.g1_A002 Ovary 2 (OV2) Sor... 138 1e-041
gb|AW679148.1|AW679148 WS1_22_D09.g1_A002 Water-stressed 1 ... 102 1e-031
gb|BG053524.1|BG053524 RHIZ2_10_C06.g1_A003 Rhizome2 (RHIZ2... 125 4e-028
gb|AW565411.1|AW565411 LG1_343_H08.g1_A002 Light Grown 1 (L... 115 6e-025
gb|CW427101.1|CW427101 fsbb001f138o15k0 Sorghum methylation... 81 6e-025
gb|AW563203.1|AW563203 LG1_204_F11.g1_A002 Light Grown 1 (L... 81 2e-022
>gb|CD206192.1|CD206192 HS1_21_F03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_21_F03_A012 3', mRNA sequence
Length = 623
Score = 231 bits (499), Expect(5) = 3e-074
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = -1 / +2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
LETYQAGLKH PKNQELLDGVRRCVEQI KASRGELSEEELKERQNKAMQDPEIQNILTD
Sbjct: 170 LETYQAGLKHDPKNQELLDGVRRCVEQINKASRGELSEEELKERQNKAMQDPEIQNILTD 349
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 179
PIM+QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*
Sbjct: 350 PIMRQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 478
Score = 211 bits (456), Expect(5) = 1e-066
Identities = 94/103 (91%), Positives = 95/103 (92%)
Frame = +2 / -2
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHLNYPCADELLDLLHHSGVLEVRL SPRVLLQI QNL HDRIS+DVLD RVLHGFVLS
Sbjct: 478 LLHLNYPCADELLDLLHHSGVLEVRLGSPRVLLQISQNLPHDRISKDVLDFRVLHGFVLS 299
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISFQ 487
LFQFLL EFA ARL DLFNTPPYTIK*LLVFR ML*ASLISFQ
Sbjct: 298 LFQFLLAEFAPARLVDLFNTPPYTIK*LLVFRVML*ASLISFQ 170
Score = 178 bits (384), Expect(4) = 6e-051
Identities = 74/102 (72%), Positives = 77/102 (75%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISGXXXXXXXX 359
YFI*TIPALTSFWIFCITPGFLRCA AARGFSC+SVKTC MIGSVRMFWISG
Sbjct: 477 YFI*TIPALTSFWIFCITPGFLRCAWAARGFSCKSVKTCRMIGSVRMFWISGSCMALFCL 298
Query: 360 XXXXXXXXXXXXXXVICSTHLLTPSSNSWFFGXCFRPA**VS 485
+ICSTHLLTPSSNSWFFG CF+PA**VS
Sbjct: 297 SFSSSSLSSPLLALLICSTHLLTPSSNSWFFGSCFKPA**VS 172
Score = 116 bits (247), Expect(5) = 8e-056
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / +3
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS 316
WKLIKLA*SM RKTRSYLMV*GGVLNRS RRA ANS RRN*KRDRTKPC+TL+SRTS
Sbjct: 171 WKLIKLA*SMTRKTRSYLMV*GGVLNRSTRRAGANSARRN*KRDRTKPCRTLKSRTS 341
Score = 110 bits (234), Expect(2) = 7e-025
Identities = 45/49 (91%), Positives = 45/49 (91%)
Frame = +1 / -1
Query: 340 AWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
AWLCSVSLSVPP *VR CSP *SVQHTSLHHQVTPGFSGHAL QLDKFP
Sbjct: 317 AWLCSVSLSVPPR*VRPCSPC*SVQHTSLHHQVTPGFSGHALSQLDKFP 171
Score = 105 bits (225), Expect(4) = 2e-033
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -3 / +1
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHA 339
GNLSSW KA PEKPGVT*WCKEVC*TD QGEQ RTQ GGTERETEQSHA
Sbjct: 172 GNLSSWLKA*PEKPGVT*WCKEVC*TDQQGEQGRTQRGGTERETEQSHA 318
Score = 88.6 bits (187), Expect(5) = 8e-056
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -3 / +1
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVD 177
AAGFD AGEPSGC GAPQEPRSDA+DPEARQRRDSSDEV+
Sbjct: 358 AAGFD*FAGEPSGCPGAPQEPRSDAKDPEARQRRDSSDEVE 480
Score = 42.8 bits (87), Expect(4) = 2e-033
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2 / +3
Query: 237 PE*CRRSRSSSAQG*FR*SR 178
PE*C+RSRSSSAQG*FR*SR
Sbjct: 420 PE*CKRSRSSSAQG*FR*SR 479
Score = 34.5 bits (69), Expect(5) = 3e-074
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 152 WDLCWKCCELDH 117
WDLCWKC E DH
Sbjct: 514 WDLCWKCYEPDH 549
Score = 33.6 bits (67), Expect(5) = 3e-074
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 119 HCFAFWKLNPFV 84
HCFAFWKLN FV
Sbjct: 550 HCFAFWKLNRFV 585
Score = 31.3 bits (62), Expect(5) = 1e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 84 HKRVQFPKCETMI 122
HK +QFPKCETM+
Sbjct: 585 HKPIQFPKCETMM 547
Score = 30.9 bits (61), Expect(5) = 8e-056
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 124 LIIVSHFGN*TLLCDHSLVMAV 59
+IIVSHFGN* LC H +++
Sbjct: 545 IIIVSHFGN*IGLCGHGC*LSI 610
Score = 29.5 bits (58), Expect(4) = 6e-051
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 77 MVTQKGSVSKMRNND 121
M TQ SVSKMRNND
Sbjct: 592 MTTQTDSVSKMRNND 548
Score = 29.0 bits (57), Expect(5) = 8e-056
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 154 SGTCAGNAVNLIIV 113
+G CAGNA+NLII+
Sbjct: 512 TGICAGNAMNLIII 553
Score = 29.0 bits (57), Expect(5) = 1e-066
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 113 NNDQVHSISSTGP 151
N+DQVHSISST P
Sbjct: 553 NDDQVHSISSTDP 515
Score = 28.6 bits (56), Expect(5) = 1e-066
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 156 NPDIPATVYF 185
NPDIPATVYF
Sbjct: 507 NPDIPATVYF 478
Score = 27.6 bits (54), Expect(4) = 2e-033
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 120 SLFRILETEPFCVTI 76
SLFRILETE CV +
Sbjct: 549 SLFRILETESVCVVM 593
Score = 26.7 bits (52), Expect(5) = 3e-074
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 75 VWSWLLMIHI 46
VWSWLL+IH+
Sbjct: 583 VWSWLLIIHM 612
Score = 26.7 bits (52), Expect(5) = 3e-074
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 183 SRRWLECPG 157
SR+WLECPG
Sbjct: 480 SRQWLECPG 506
Score = 26.7 bits (52), Expect(4) = 6e-051
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 117 MIKFTAFPAQVP 152
MI+F AFPAQ+P
Sbjct: 549 MIRFIAFPAQIP 514
Score = 26.7 bits (52), Expect(5) = 1e-066
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 47 IWIINSHDQT 76
IWIINSHD T
Sbjct: 611 IWIINSHDHT 582
Score = 26.3 bits (51), Expect(5) = 8e-056
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 185 EVDGGWNVRV 156
EVD GWNVRV
Sbjct: 478 EVDSGWNVRV 507
Score = 25.4 bits (49), Expect(2) = 7e-025
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 73 NYGHTKGFSFQNAK 114
++ HT FSFQNAK
Sbjct: 596 SHDHTNRFSFQNAK 555
Score = 23.1 bits (44), Expect(4) = 6e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 158 PGHSSHRLLHLN 193
PGHSSH LL L+
Sbjct: 505 PGHSSHCLLLLH 470
Score = 22.1 bits (42), Expect(4) = 2e-033
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 153 LGPVLEML*T*S 118
LG VLEML*T*S
Sbjct: 513 LGSVLEML*T*S 548
>gb|CF073438.1|CF073438 FE1_10_B08.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_10_B08_A002 3', mRNA sequence
Length = 633
Score = 231 bits (499), Expect(5) = 3e-074
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = -1 / +2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
LETYQAGLKH PKNQELLDGVRRCVEQI KASRGELSEEELKERQNKAMQDPEIQNILTD
Sbjct: 182 LETYQAGLKHDPKNQELLDGVRRCVEQINKASRGELSEEELKERQNKAMQDPEIQNILTD 361
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 179
PIM+QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*
Sbjct: 362 PIMRQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 490
Score = 211 bits (456), Expect(5) = 1e-066
Identities = 94/103 (91%), Positives = 95/103 (92%)
Frame = +2 / -3
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHLNYPCADELLDLLHHSGVLEVRL SPRVLLQI QNL HDRIS+DVLD RVLHGFVLS
Sbjct: 490 LLHLNYPCADELLDLLHHSGVLEVRLGSPRVLLQISQNLPHDRISKDVLDFRVLHGFVLS 311
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISFQ 487
LFQFLL EFA ARL DLFNTPPYTIK*LLVFR ML*ASLISFQ
Sbjct: 310 LFQFLLAEFAPARLVDLFNTPPYTIK*LLVFRVML*ASLISFQ 182
Score = 178 bits (384), Expect(4) = 6e-051
Identities = 74/102 (72%), Positives = 77/102 (75%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISGXXXXXXXX 359
YFI*TIPALTSFWIFCITPGFLRCA AARGFSC+SVKTC MIGSVRMFWISG
Sbjct: 489 YFI*TIPALTSFWIFCITPGFLRCAWAARGFSCKSVKTCRMIGSVRMFWISGSCMALFCL 310
Query: 360 XXXXXXXXXXXXXXVICSTHLLTPSSNSWFFGXCFRPA**VS 485
+ICSTHLLTPSSNSWFFG CF+PA**VS
Sbjct: 309 SFSSSSLSSPLLALLICSTHLLTPSSNSWFFGSCFKPA**VS 184
Score = 116 bits (247), Expect(5) = 8e-056
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / +3
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS 316
WKLIKLA*SM RKTRSYLMV*GGVLNRS RRA ANS RRN*KRDRTKPC+TL+SRTS
Sbjct: 183 WKLIKLA*SMTRKTRSYLMV*GGVLNRSTRRAGANSARRN*KRDRTKPCRTLKSRTS 353
Score = 110 bits (234), Expect(2) = 7e-025
Identities = 45/49 (91%), Positives = 45/49 (91%)
Frame = +1 / -2
Query: 340 AWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
AWLCSVSLSVPP *VR CSP *SVQHTSLHHQVTPGFSGHAL QLDKFP
Sbjct: 329 AWLCSVSLSVPPR*VRPCSPC*SVQHTSLHHQVTPGFSGHALSQLDKFP 183
Score = 105 bits (225), Expect(4) = 2e-033
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -3 / +1
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHA 339
GNLSSW KA PEKPGVT*WCKEVC*TD QGEQ RTQ GGTERETEQSHA
Sbjct: 184 GNLSSWLKA*PEKPGVT*WCKEVC*TDQQGEQGRTQRGGTERETEQSHA 330
Score = 88.6 bits (187), Expect(5) = 8e-056
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -3 / +1
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVD 177
AAGFD AGEPSGC GAPQEPRSDA+DPEARQRRDSSDEV+
Sbjct: 370 AAGFD*FAGEPSGCPGAPQEPRSDAKDPEARQRRDSSDEVE 492
Score = 42.8 bits (87), Expect(4) = 2e-033
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2 / +3
Query: 237 PE*CRRSRSSSAQG*FR*SR 178
PE*C+RSRSSSAQG*FR*SR
Sbjct: 432 PE*CKRSRSSSAQG*FR*SR 491
Score = 34.5 bits (69), Expect(5) = 3e-074
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 152 WDLCWKCCELDH 117
WDLCWKC E DH
Sbjct: 526 WDLCWKCYEPDH 561
Score = 33.6 bits (67), Expect(5) = 3e-074
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 119 HCFAFWKLNPFV 84
HCFAFWKLN FV
Sbjct: 562 HCFAFWKLNRFV 597
Score = 31.3 bits (62), Expect(5) = 1e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 84 HKRVQFPKCETMI 122
HK +QFPKCETM+
Sbjct: 597 HKPIQFPKCETMM 559
Score = 30.9 bits (61), Expect(5) = 8e-056
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 124 LIIVSHFGN*TLLCDHSLVMAV 59
+IIVSHFGN* LC H +++
Sbjct: 557 IIIVSHFGN*IGLCGHGC*LSI 622
Score = 29.5 bits (58), Expect(4) = 6e-051
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -3
Query: 77 MVTQKGSVSKMRNND 121
M TQ SVSKMRNND
Sbjct: 604 MTTQTDSVSKMRNND 560
Score = 29.0 bits (57), Expect(5) = 8e-056
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 154 SGTCAGNAVNLIIV 113
+G CAGNA+NLII+
Sbjct: 524 TGICAGNAMNLIII 565
Score = 29.0 bits (57), Expect(5) = 1e-066
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -3
Query: 113 NNDQVHSISSTGP 151
N+DQVHSISST P
Sbjct: 565 NDDQVHSISSTDP 527
Score = 28.6 bits (56), Expect(5) = 1e-066
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 156 NPDIPATVYF 185
NPDIPATVYF
Sbjct: 519 NPDIPATVYF 490
Score = 27.6 bits (54), Expect(4) = 2e-033
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 120 SLFRILETEPFCVTI 76
SLFRILETE CV +
Sbjct: 561 SLFRILETESVCVVM 605
Score = 26.7 bits (52), Expect(5) = 3e-074
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 75 VWSWLLMIHI 46
VWSWLL+IH+
Sbjct: 595 VWSWLLIIHM 624
Score = 26.7 bits (52), Expect(5) = 3e-074
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 183 SRRWLECPG 157
SR+WLECPG
Sbjct: 492 SRQWLECPG 518
Score = 26.7 bits (52), Expect(4) = 6e-051
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 117 MIKFTAFPAQVP 152
MI+F AFPAQ+P
Sbjct: 561 MIRFIAFPAQIP 526
Score = 26.7 bits (52), Expect(5) = 1e-066
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 47 IWIINSHDQT 76
IWIINSHD T
Sbjct: 623 IWIINSHDHT 594
Score = 26.3 bits (51), Expect(5) = 8e-056
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 185 EVDGGWNVRV 156
EVD GWNVRV
Sbjct: 490 EVDSGWNVRV 519
Score = 25.4 bits (49), Expect(2) = 7e-025
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -2
Query: 73 NYGHTKGFSFQNAK 114
++ HT FSFQNAK
Sbjct: 608 SHDHTNRFSFQNAK 567
Score = 23.1 bits (44), Expect(4) = 6e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 158 PGHSSHRLLHLN 193
PGHSSH LL L+
Sbjct: 517 PGHSSHCLLLLH 482
Score = 22.1 bits (42), Expect(4) = 2e-033
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 153 LGPVLEML*T*S 118
LG VLEML*T*S
Sbjct: 525 LGSVLEML*T*S 560
>gb|CD225929.1|CD225929 CCC1_42_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_E11_A007 3', mRNA sequence
Length = 642
Score = 231 bits (499), Expect(5) = 4e-074
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
LETYQAGLKH PKNQELLDGVRRCVEQI KASRGELSEEELKERQNKAMQDPEIQNILTD
Sbjct: 198 LETYQAGLKHDPKNQELLDGVRRCVEQINKASRGELSEEELKERQNKAMQDPEIQNILTD 377
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 179
PIM+QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*
Sbjct: 378 PIMRQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 506
Score = 211 bits (456), Expect(5) = 1e-066
Identities = 94/103 (91%), Positives = 95/103 (92%)
Frame = +2 / -2
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHLNYPCADELLDLLHHSGVLEVRL SPRVLLQI QNL HDRIS+DVLD RVLHGFVLS
Sbjct: 506 LLHLNYPCADELLDLLHHSGVLEVRLGSPRVLLQISQNLPHDRISKDVLDFRVLHGFVLS 327
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISFQ 487
LFQFLL EFA ARL DLFNTPPYTIK*LLVFR ML*ASLISFQ
Sbjct: 326 LFQFLLAEFAPARLVDLFNTPPYTIK*LLVFRVML*ASLISFQ 198
Score = 178 bits (384), Expect(4) = 6e-051
Identities = 74/102 (72%), Positives = 77/102 (75%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISGXXXXXXXX 359
YFI*TIPALTSFWIFCITPGFLRCA AARGFSC+SVKTC MIGSVRMFWISG
Sbjct: 505 YFI*TIPALTSFWIFCITPGFLRCAWAARGFSCKSVKTCRMIGSVRMFWISGSCMALFCL 326
Query: 360 XXXXXXXXXXXXXXVICSTHLLTPSSNSWFFGXCFRPA**VS 485
+ICSTHLLTPSSNSWFFG CF+PA**VS
Sbjct: 325 SFSSSSLSSPLLALLICSTHLLTPSSNSWFFGSCFKPA**VS 200
Score = 116 bits (247), Expect(5) = 9e-056
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / +1
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS 316
WKLIKLA*SM RKTRSYLMV*GGVLNRS RRA ANS RRN*KRDRTKPC+TL+SRTS
Sbjct: 199 WKLIKLA*SMTRKTRSYLMV*GGVLNRSTRRAGANSARRN*KRDRTKPCRTLKSRTS 369
Score = 110 bits (234), Expect(2) = 7e-025
Identities = 45/49 (91%), Positives = 45/49 (91%)
Frame = +1 / -1
Query: 340 AWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
AWLCSVSLSVPP *VR CSP *SVQHTSLHHQVTPGFSGHAL QLDKFP
Sbjct: 345 AWLCSVSLSVPPR*VRPCSPC*SVQHTSLHHQVTPGFSGHALSQLDKFP 199
Score = 105 bits (225), Expect(4) = 2e-033
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHA 339
GNLSSW KA PEKPGVT*WCKEVC*TD QGEQ RTQ GGTERETEQSHA
Sbjct: 200 GNLSSWLKA*PEKPGVT*WCKEVC*TDQQGEQGRTQRGGTERETEQSHA 346
Score = 88.6 bits (187), Expect(5) = 9e-056
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -3 / +2
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVD 177
AAGFD AGEPSGC GAPQEPRSDA+DPEARQRRDSSDEV+
Sbjct: 386 AAGFD*FAGEPSGCPGAPQEPRSDAKDPEARQRRDSSDEVE 508
Score = 42.8 bits (87), Expect(4) = 2e-033
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2 / +1
Query: 237 PE*CRRSRSSSAQG*FR*SR 178
PE*C+RSRSSSAQG*FR*SR
Sbjct: 448 PE*CKRSRSSSAQG*FR*SR 507
Score = 34.5 bits (69), Expect(5) = 4e-074
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 152 WDLCWKCCELDH 117
WDLCWKC E DH
Sbjct: 542 WDLCWKCYEPDH 577
Score = 33.6 bits (67), Expect(5) = 4e-074
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 119 HCFAFWKLNPFV 84
HCFAFWKLN FV
Sbjct: 578 HCFAFWKLNRFV 613
Score = 31.3 bits (62), Expect(5) = 1e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 84 HKRVQFPKCETMI 122
HK +QFPKCETM+
Sbjct: 613 HKPIQFPKCETMM 575
Score = 30.9 bits (61), Expect(5) = 9e-056
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +3
Query: 124 LIIVSHFGN*TLLCDHSLVMAV 59
+IIVSHFGN* LC H +++
Sbjct: 573 IIIVSHFGN*IGLCGHGC*LSI 638
Score = 29.5 bits (58), Expect(4) = 6e-051
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 77 MVTQKGSVSKMRNND 121
M TQ SVSKMRNND
Sbjct: 620 MTTQTDSVSKMRNND 576
Score = 29.0 bits (57), Expect(5) = 9e-056
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 154 SGTCAGNAVNLIIV 113
+G CAGNA+NLII+
Sbjct: 540 TGICAGNAMNLIII 581
Score = 29.0 bits (57), Expect(5) = 1e-066
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 113 NNDQVHSISSTGP 151
N+DQVHSISST P
Sbjct: 581 NDDQVHSISSTDP 543
Score = 28.6 bits (56), Expect(5) = 1e-066
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 156 NPDIPATVYF 185
NPDIPATVYF
Sbjct: 535 NPDIPATVYF 506
Score = 27.6 bits (54), Expect(4) = 2e-033
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 120 SLFRILETEPFCVTI 76
SLFRILETE CV +
Sbjct: 577 SLFRILETESVCVVM 621
Score = 27.2 bits (53), Expect(5) = 1e-066
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 44 HIWIINSHDQT 76
+IWIINSHD T
Sbjct: 642 NIWIINSHDHT 610
Score = 26.7 bits (52), Expect(5) = 4e-074
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 75 VWSWLLMIHI 46
VWSWLL+IH+
Sbjct: 611 VWSWLLIIHM 640
Score = 26.7 bits (52), Expect(5) = 4e-074
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 183 SRRWLECPG 157
SR+WLECPG
Sbjct: 508 SRQWLECPG 534
Score = 26.7 bits (52), Expect(4) = 6e-051
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 117 MIKFTAFPAQVP 152
MI+F AFPAQ+P
Sbjct: 577 MIRFIAFPAQIP 542
Score = 26.3 bits (51), Expect(5) = 9e-056
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 185 EVDGGWNVRV 156
EVD GWNVRV
Sbjct: 506 EVDSGWNVRV 535
Score = 25.4 bits (49), Expect(2) = 7e-025
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 73 NYGHTKGFSFQNAK 114
++ HT FSFQNAK
Sbjct: 624 SHDHTNRFSFQNAK 583
Score = 23.1 bits (44), Expect(4) = 6e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 158 PGHSSHRLLHLN 193
PGHSSH LL L+
Sbjct: 533 PGHSSHCLLLLH 498
Score = 22.1 bits (42), Expect(4) = 2e-033
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 153 LGPVLEML*T*S 118
LG VLEML*T*S
Sbjct: 541 LGSVLEML*T*S 576
>gb|AW747621.1|AW747621 WS1_74_C09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 66 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 245
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 246 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 377
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -1
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 368 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 189
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 188 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 69
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 68 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 247
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 248 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 373
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -2
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 373 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 218
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -3
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 216 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 67
>gb|AW923920.1|AW923920 WS1_30_B03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 165 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 344
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 345 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 476
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -2
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 467 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 288
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 287 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 168
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 167 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 346
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 347 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 472
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 472 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 317
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 315 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 166
>gb|AW925011.1|AW925011 WS1_74_C09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 589
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 165 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 344
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 345 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 476
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 467 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 288
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 287 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 168
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 167 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 346
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 347 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 472
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 472 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 317
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 315 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 166
>gb|BE598987.1|BE598987 PI1_86_A03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 585
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 69 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 248
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 249 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 380
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -2
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 371 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 192
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 191 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 72
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 71 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 250
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 251 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 376
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 376 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 221
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 219 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 70
>gb|BG048518.1|BG048518 OV1_14_E09.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 615
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 132 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 311
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 312 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 443
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -2
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 434 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 255
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 254 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 135
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 134 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 313
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 314 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 439
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 439 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 284
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 282 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 133
>gb|BG240707.1|BG240707 OV1_37_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 73 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 252
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 253 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 384
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 375 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 196
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 195 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 76
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +3
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 75 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 254
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 255 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 380
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 380 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 225
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 223 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 74
>gb|BG947049.1|BG947049 IP1_2_H09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 590
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 55 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 234
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 235 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 366
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 357 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 178
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 177 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 58
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +3
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 57 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 236
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 237 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 362
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 362 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 207
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 205 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 56
>gb|CD424860.1|CD424860 SA1_9_E01.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_E01_A002 3', mRNA sequence
Length = 605
Score = 210 bits (453), Expect = 1e-053
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 60 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 239
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 240 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 371
Score = 127 bits (272), Expect = 1e-028
Identities = 60/100 (60%), Positives = 71/100 (71%)
Frame = +2 / -1
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 362 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 183
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 182 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 63
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 62 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 241
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 242 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSNEM 367
Score = 97.3 bits (206), Expect(2) = 4e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -2
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 367 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 212
Score = 61.6 bits (128), Expect(2) = 4e-032
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -3
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 210 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 61
>gb|BG052764.1|BG052764 RHIZ2_14_E10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 617
Score = 209 bits (450), Expect = 3e-053
Identities = 86/104 (82%), Positives = 97/104 (93%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 133 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 312
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGV+QKIQKLVSAGIVQM+*+
Sbjct: 313 PIMRQVLIDFQENPRAAQEHLKNPGVLQKIQKLVSAGIVQMR*S 444
Score = 123 bits (264), Expect = 1e-027
Identities = 59/100 (59%), Positives = 70/100 (70%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LL +SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 435 HLNYPSTYKLLNLLQNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 256
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 255 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 136
Score = 103 bits (219), Expect = 2e-021
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = -3 / +3
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 135 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 314
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS+E+
Sbjct: 315 YHATGAN*FPGEPKGSPGAPEEPRSFAEDSEACKCWDSSNEM 440
Score = 94.1 bits (199), Expect(2) = 3e-031
Identities = 39/52 (75%), Positives = 43/52 (82%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFC TPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 440 HLI*TIPALTSF*IFCKTPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 285
Score = 61.6 bits (128), Expect(2) = 3e-031
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 283 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 134
>gb|AW746098.1|AW746098 WS1_39_H03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 508
Score = 207 bits (447), Expect = 8e-053
Identities = 86/104 (82%), Positives = 96/104 (92%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 178 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 357
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
PIM+QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIV M+*+
Sbjct: 358 PIMRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVXMR*S 489
Score = 125 bits (267), Expect = 5e-028
Identities = 59/100 (59%), Positives = 70/100 (70%)
Frame = +2 / -2
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
H NYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 480 HXNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 301
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
QF+LT F S L DLFNTPP TIK V ML ASL+ F
Sbjct: 300 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQASLVGF 181
Score = 102 bits (217), Expect = 4e-021
Identities = 51/102 (50%), Positives = 62/102 (60%)
Frame = -3 / +3
Query: 485 GNLSSWPKAXPEKPGVT*WCKEVC*TDHQGEQRRTQ*GGTERETEQSHARXXXXXXXXXX 306
GNL W +A P++PG *WC EV *TD QG+QR + G R+TEQS+AR
Sbjct: 180 GNLPGWLEA*PKQPGTA*WC*EVY*TDQQGQQR*NKSGRIARKTEQSYARPRDPEHSYRP 359
Query: 305 XHAAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEV 180
HA G + GEP G GAP+EPRS AED EA + DSS E+
Sbjct: 360 YHATGAN*FPGEPKGSPGAPEEPRSYAEDSEACKCWDSSXEM 485
Score = 95.0 bits (201), Expect(2) = 2e-031
Identities = 39/52 (75%), Positives = 43/52 (82%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ *TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 485 HLX*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 330
Score = 61.6 bits (128), Expect(2) = 2e-031
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA Q +FP
Sbjct: 328 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHASSQPGRFP 179
>gb|AW679708.1|AW679708 WS1_30_B03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 531
Score = 197 bits (425), Expect = 8e-050
Identities = 82/98 (83%), Positives = 91/98 (92%)
Frame = -1 / +2
Query: 469 GLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQV 290
GLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTDPIM+QV
Sbjct: 2 GLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQV 181
Query: 289 LTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
L D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 182 LIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 295
Score = 119 bits (255), Expect = 2e-026
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 286 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 107
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML 463
QF+LT F S L DLFNTPP TIK V ML
Sbjct: 106 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVML 8
Score = 97.3 bits (206), Expect(2) = 3e-030
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 291 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 136
Score = 55.1 bits (114), Expect(2) = 3e-030
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHA 462
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA
Sbjct: 134 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHA 9
>gb|AW746132.1|AW746132 WS1_39_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 512
Score = 194 bits (419), Expect = 6e-049
Identities = 81/97 (83%), Positives = 90/97 (92%)
Frame = -1 / +3
Query: 466 LKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVL 287
LKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTDPIM+QVL
Sbjct: 3 LKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVL 182
Query: 286 TDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 183 IDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 293
Score = 119 bits (255), Expect = 2e-026
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +2 / -1
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 284 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 105
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML 463
QF+LT F S L DLFNTPP TIK V ML
Sbjct: 104 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVML 6
Score = 95.9 bits (203), Expect(2) = 8e-030
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +3 / -2
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF +C+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 289 HLI*TIPALTSF*IFCITPGFFKCSWAALGFSWKSISTCRMIGSVRMFWISG 134
Score = 55.1 bits (114), Expect(2) = 8e-030
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +1 / -3
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHA 462
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA
Sbjct: 132 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHA 7
>gb|CW063071.1|CW063071 104_308_10521699_1_30092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521699, DNA
sequence
Length = 638
Score = 95.5 bits (202), Expect(4) = 7e-047
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +3 / +1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTC 296
YFI*TIPALTSFWIFCITPGFLRCA AARGFSC+SVKTC
Sbjct: 7 YFI*TIPALTSFWIFCITPGFLRCAWAARGFSCKSVKTC 123
Score = 89.0 bits (188), Expect(4) = 9e-049
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -1
Query: 295 QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 179
QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*
Sbjct: 122 QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 6
Score = 88.6 bits (187), Expect(4) = 7e-040
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +2 / +3
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNL 295
LLHLNYPCADELLDLLHHSGVLEVRL SPRVLLQI QNL
Sbjct: 6 LLHLNYPCADELLDLLHHSGVLEVRLGSPRVLLQISQNL 122
Score = 86.8 bits (183), Expect(4) = 4e-039
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -3 / -3
Query: 296 AGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVD 177
AGFD AGEPSGC GAPQEPRSDA+DPEARQRRDSSDEV+
Sbjct: 123 AGFD*FAGEPSGCPGAPQEPRSDAKDPEARQRRDSSDEVE 4
Score = 58.3 bits (121), Expect(4) = 7e-047
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1 / +1
Query: 418 TSLHHQVTPGFSGHALGQLDKFP 486
TSLHHQVTPGFSGHAL QLDKFP
Sbjct: 535 TSLHHQVTPGFSGHALSQLDKFP 603
Score = 55.1 bits (114), Expect(4) = 9e-049
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1 / -2
Query: 487 LETYQAGLKHXPKNQELLDGVRR 419
LETYQAGLKH PKNQELLDGVRR
Sbjct: 604 LETYQAGLKHDPKNQELLDGVRR 536
Score = 54.2 bits (112), Expect(4) = 9e-049
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -1 / -3
Query: 352 NKAMQDPEIQNILTDPIMQQVLTDL 278
NKAMQDPEIQNILTDPIM+QV+T++
Sbjct: 267 NKAMQDPEIQNILTDPIMRQVMTNV 193
Score = 53.8 bits (111), Expect(4) = 4e-039
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -3 / -1
Query: 485 GNLSSWPKAXPEKPGVT*WCKEV 417
GNLSSW KA PEKPGVT*WCKEV
Sbjct: 602 GNLSSWLKA*PEKPGVT*WCKEV 534
Score = 52.4 bits (108), Expect(4) = 9e-049
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1 / -1
Query: 421 RCVEQITKASRGELSEEELKERQ 353
RCVEQI KASRGELSEEELKERQ
Sbjct: 449 RCVEQINKASRGELSEEELKERQ 381
Score = 51.9 bits (107), Expect(4) = 7e-040
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3 / +3
Query: 417 HLLTPSSNSWFFGXCFRPA**VS 485
+LLTPSSNSWFFG CF+PA**VS
Sbjct: 534 YLLTPSSNSWFFGSCFKPA**VS 602
Score = 46.4 bits (95), Expect(4) = 7e-047
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2 / +3
Query: 353 LSLFQFLLTEFASARLGDLFNTP 421
LSLFQFLL EFA ARL DLFNTP
Sbjct: 381 LSLFQFLLAEFAPARLVDLFNTP 449
Score = 46.0 bits (94), Expect(4) = 4e-039
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 422 EVC*TDHQGEQRRTQ*GGTERET 354
+VC*TD QGEQ RTQ GGTERET
Sbjct: 450 QVC*TDQQGEQGRTQRGGTERET 382
Score = 44.1 bits (90), Expect(4) = 7e-047
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2 / +1
Query: 293 LLHDRISQDVLDLRVLHGFVL 355
L HDRIS+DVLD RVLHGFVL
Sbjct: 208 LPHDRISKDVLDFRVLHGFVL 270
Score = 42.3 bits (86), Expect(4) = 7e-040
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 355 VSLSVPPH*VRLCSPW*SVQHT 420
VSLSVPP *VR CSP *SVQHT
Sbjct: 383 VSLSVPPR*VRPCSPC*SVQHT 448
Score = 37.7 bits (76), Expect(4) = 7e-040
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 285 VKTCCMIGSVRMFWISG 335
V TC MIGSVRMFWISG
Sbjct: 200 VITCRMIGSVRMFWISG 250
Score = 31.3 bits (62), Expect(4) = 4e-039
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -2 / -1
Query: 354 RTKPCKTLRSRTS 316
RTKPC+TL+SRTS
Sbjct: 269 RTKPCRTLKSRTS 231
>gb|CW040788.1|CW040788 104_274_10506292_114_30470 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506292, DNA
sequence
Length = 717
Score = 95.5 bits (202), Expect(7) = 2e-044
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTC 296
YFI*TIPALTSFWIFCITPGFLRCA AARGFSC+SVKTC
Sbjct: 415 YFI*TIPALTSFWIFCITPGFLRCAWAARGFSCKSVKTC 299
Score = 89.0 bits (188), Expect(7) = 1e-048
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / +3
Query: 295 QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 179
QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*
Sbjct: 300 QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 416
Score = 88.6 bits (187), Expect(6) = 6e-034
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +2 / -2
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNL 295
LLHLNYPCADELLDLLHHSGVLEVRL SPRVLLQI QNL
Sbjct: 416 LLHLNYPCADELLDLLHHSGVLEVRLGSPRVLLQISQNL 300
Score = 86.8 bits (183), Expect(6) = 4e-034
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -3 / +2
Query: 296 AGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVD 177
AGFD AGEPSGC GAPQEPRSDA+DPEARQRRDSSDEV+
Sbjct: 299 AGFD*FAGEPSGCPGAPQEPRSDAKDPEARQRRDSSDEVE 418
Score = 54.2 bits (112), Expect(7) = 1e-048
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -1 / +2
Query: 352 NKAMQDPEIQNILTDPIMQQVLTDL 278
NKAMQDPEIQNILTDPIM+QV+T++
Sbjct: 155 NKAMQDPEIQNILTDPIMRQVMTNV 229
Score = 44.1 bits (90), Expect(7) = 2e-044
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2 / -3
Query: 293 LLHDRISQDVLDLRVLHGFVL 355
L HDRIS+DVLD RVLHGFVL
Sbjct: 214 LPHDRISKDVLDFRVLHGFVL 152
Score = 37.7 bits (76), Expect(6) = 6e-034
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 285 VKTCCMIGSVRMFWISG 335
V TC MIGSVRMFWISG
Sbjct: 222 VITCRMIGSVRMFWISG 172
Score = 34.5 bits (69), Expect(7) = 1e-048
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 152 WDLCWKCCELDH 117
WDLCWKC E DH
Sbjct: 452 WDLCWKCYEPDH 487
Score = 33.6 bits (67), Expect(7) = 1e-048
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 119 HCFAFWKLNPFV 84
HCFAFWKLN FV
Sbjct: 488 HCFAFWKLNRFV 523
Score = 31.8 bits (63), Expect(7) = 1e-048
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1 / +3
Query: 391 RGELSEEELKERQ 353
RGELSEEELKERQ
Sbjct: 3 RGELSEEELKERQ 41
Score = 31.3 bits (62), Expect(7) = 2e-044
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 84 HKRVQFPKCETMI 122
HK +QFPKCETM+
Sbjct: 523 HKPIQFPKCETMM 485
Score = 31.3 bits (62), Expect(6) = 4e-034
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -2 / +3
Query: 354 RTKPCKTLRSRTS 316
RTKPC+TL+SRTS
Sbjct: 153 RTKPCRTLKSRTS 191
Score = 30.9 bits (61), Expect(6) = 4e-034
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +3
Query: 124 LIIVSHFGN*TLLCDHSLVMAV 59
+IIVSHFGN* LC H +++
Sbjct: 483 IIIVSHFGN*IGLCGHGC*LSI 548
Score = 29.5 bits (58), Expect(6) = 6e-034
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 77 MVTQKGSVSKMRNND 121
M TQ SVSKMRNND
Sbjct: 530 MTTQTDSVSKMRNND 486
Score = 29.0 bits (57), Expect(6) = 4e-034
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 154 SGTCAGNAVNLIIV 113
+G CAGNA+NLII+
Sbjct: 450 TGICAGNAMNLIII 491
Score = 29.0 bits (57), Expect(7) = 2e-044
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 113 NNDQVHSISSTGP 151
N+DQVHSISST P
Sbjct: 491 NDDQVHSISSTDP 453
Score = 28.6 bits (56), Expect(7) = 2e-044
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 156 NPDIPATVYF 185
NPDIPATVYF
Sbjct: 445 NPDIPATVYF 416
Score = 27.6 bits (54), Expect(6) = 4e-034
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 393 AEANSVRRN*KRDR 352
A ANS RRN*KRDR
Sbjct: 1 AGANSARRN*KRDR 42
Score = 26.7 bits (52), Expect(7) = 2e-044
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 353 LSLFQFLLTEFA 388
LSLFQFLL EFA
Sbjct: 41 LSLFQFLLAEFA 6
Score = 26.7 bits (52), Expect(7) = 1e-048
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 75 VWSWLLMIHI 46
VWSWLL+IH+
Sbjct: 521 VWSWLLIIHM 550
Score = 26.7 bits (52), Expect(7) = 1e-048
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 183 SRRWLECPG 157
SR+WLECPG
Sbjct: 418 SRQWLECPG 444
Score = 26.7 bits (52), Expect(6) = 6e-034
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 117 MIKFTAFPAQVP 152
MI+F AFPAQ+P
Sbjct: 487 MIRFIAFPAQIP 452
Score = 26.7 bits (52), Expect(7) = 2e-044
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 47 IWIINSHDQT 76
IWIINSHD T
Sbjct: 549 IWIINSHDHT 520
Score = 26.3 bits (51), Expect(6) = 4e-034
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 185 EVDGGWNVRV 156
EVD GWNVRV
Sbjct: 416 EVDSGWNVRV 445
Score = 25.8 bits (50), Expect(6) = 6e-034
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 355 VSLSVPPH*VRLC 393
VSLSVPP *VR C
Sbjct: 39 VSLSVPPR*VRPC 1
Score = 23.1 bits (44), Expect(6) = 6e-034
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 158 PGHSSHRLLHLN 193
PGHSSH LL L+
Sbjct: 443 PGHSSHCLLLLH 408
>gb|BE364598.2|BE364598 PI1_15_B06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 532
Score = 193 bits (416), Expect = 1e-048
Identities = 81/98 (82%), Positives = 90/98 (91%)
Frame = -1 / +3
Query: 469 GLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQV 290
GLKH P N ELLD VRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTDPIM+QV
Sbjct: 3 GLKHDPNNPELLDCVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQV 182
Query: 289 LTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
L D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 183 LIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 296
Score = 119 bits (255), Expect = 2e-026
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 287 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 108
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML 463
QF+LT F S L DLFNTPP TIK V ML
Sbjct: 107 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVML 9
Score = 97.3 bits (206), Expect(2) = 1e-029
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 292 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 137
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQ 471
LA LCSV L++ P LC P *SVQ+TS H+Q PG GHA Q
Sbjct: 135 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HNQAVPGCLGHASSQ 1
>gb|BE364817.2|BE364817 PI1_16_D01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 190 bits (410), Expect = 1e-047
Identities = 80/97 (82%), Positives = 89/97 (91%)
Frame = -1 / +1
Query: 466 LKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVL 287
LKH P N ELLD VRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTDPIM+QVL
Sbjct: 1 LKHDPNNPELLDCVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVL 180
Query: 286 TDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 181 IDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 291
Score = 119 bits (255), Expect = 2e-026
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +2 / -3
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL VLH FVLS
Sbjct: 282 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWVLHSFVLSFL 103
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML 463
QF+LT F S L DLFNTPP TIK V ML
Sbjct: 102 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVML 4
Score = 97.3 bits (206), Expect(2) = 3e-029
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 287 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTCRMIGSVRMFWISG 132
Score = 51.9 bits (107), Expect(2) = 3e-029
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +1 / -2
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHA 462
LA LCSV L++ P LC P *SVQ+TS H+Q PG GHA
Sbjct: 130 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HNQAVPGCLGHA 5
>gb|CB929152.1|CB929152 ABA1_40_A09.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_40_A09_A012 3', mRNA sequence
Length = 500
Score = 186 bits (400), Expect = 2e-046
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = -1 / +3
Query: 463 KHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLT 284
KH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQ PEIQNI TDPIM QVL
Sbjct: 3 KHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQAPEIQNIFTDPIMGQVLI 182
Query: 283 DLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 183 DFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 290
Score = 116 bits (248), Expect = 2e-025
Identities = 55/93 (59%), Positives = 65/93 (69%)
Frame = +2 / -1
Query: 185 HLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLF 364
HLNYP +LL+LLH+SGVL+V L P VLL+I +L HDR+ ++VLDL LH FVLS
Sbjct: 281 HLNYPSTYKLLNLLHNSGVLQVLLGCPWVLLEIN*HLSHDRVGKNVLDLWGLHSFVLSFL 102
Query: 365 QFLLTEFASARLGDLFNTPPYTIK*LLVFRXML 463
QF+LT F S L DLFNTPP TIK V ML
Sbjct: 101 QFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVML 3
Score = 95.9 bits (203), Expect(2) = 8e-030
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +3 / -2
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC MIGSV+MFWISG
Sbjct: 286 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSINTCPMIGSVKMFWISG 131
Score = 55.1 bits (114), Expect(2) = 8e-030
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +1 / -3
Query: 337 LAWLCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHA 462
LA LCSV L++ P LC P *SVQ+TS HHQ PG GHA
Sbjct: 129 LA*LCSVFLAIRPDLFHLCWPC*SVQYTS*HHQAVPGCLGHA 4
>gb|BG273158.1|BG273158 OV2_27_E09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 631
Score = 138 bits (295), Expect(2) = 1e-041
Identities = 55/67 (82%), Positives = 63/67 (94%)
Frame = -1 / +2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLKH P N ELLDGVRRC+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTD
Sbjct: 356 METYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTD 535
Query: 307 PIMQQVL 287
PIM+QVL
Sbjct: 536 PIMRQVL 556
Score = 83.5 bits (176), Expect(2) = 4e-022
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2 / -1
Query: 290 NLLHDRISQDVLDLRVLHGFVLSLFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*A 469
+L HDR+ ++VLDL VLH FVLS QF+LT F S L DLFNTPP TIK V ML A
Sbjct: 553 HLSHDRVGKNVLDLWVLHSFVLSFLQFVLTYFTSVGLVDLFNTPPNTIKQFRVVWVMLQA 374
Query: 470 SLISF 484
SL+ F
Sbjct: 373 SLVGF 359
Score = 52.8 bits (109), Expect(2) = 1e-041
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1 / +1
Query: 277 QENPRAAQAHLKNPGVMQKIQK 212
QENPRAAQ HLKNPGVMQKIQK
Sbjct: 565 QENPRAAQEHLKNPGVMQKIQK 630
Score = 41.4 bits (84), Expect(2) = 4e-022
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3 / -3
Query: 213 FWIFCITPGFLRCACAARGFS 275
F IFCITPGF RC+ AA GFS
Sbjct: 629 F*IFCITPGFFRCSWAALGFS 567
>gb|AW679148.1|AW679148 WS1_22_D09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 538
Score = 102 bits (218), Expect(3) = 1e-031
Identities = 41/51 (80%), Positives = 48/51 (94%)
Frame = -1 / +1
Query: 415 VEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPR 263
+EQI KA+RGE+S++EL+ERQNKAMQDPEIQNILTDPIM+QVL D QENPR
Sbjct: 103 IEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLIDFQENPR 255
Score = 40.9 bits (83), Expect(3) = 1e-031
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = -1 / +3
Query: 235 GVMQKIQKLVSAGIVQMK*T 176
GVMQKIQKLVSAGIVQM+*+
Sbjct: 255 GVMQKIQKLVSAGIVQMR*S 314
Score = 31.3 bits (62), Expect(3) = 1e-031
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / +2
Query: 487 LETYQAGLKHXPK 449
+ETYQAGLKH PK
Sbjct: 65 METYQAGLKHDPK 103
>gb|BG053524.1|BG053524 RHIZ2_10_C06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 455
Score = 125 bits (268), Expect = 4e-028
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = -1 / +3
Query: 361 ERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK 182
ERQNKAMQDPEIQNI TDPIM+QV D QENPRAAQ HLKNPGV+QKIQKLVSAGIVQM+
Sbjct: 3 ERQNKAMQDPEIQNIFTDPIMRQVXIDFQENPRAAQEHLKNPGVLQKIQKLVSAGIVQMR 182
Query: 181 *T 176
*+
Sbjct: 183 *S 188
>gb|AW565411.1|AW565411 LG1_343_H08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 400
Score = 115 bits (245), Expect = 6e-025
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 349 KAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
KAMQDPEIQNI TDPIM+QV+ D QENPRAAQ LKNPGVMQKIQKLVSAGIVQMK*+
Sbjct: 3 KAMQDPEIQNIFTDPIMRQVVIDFQENPRAAQEPLKNPGVMQKIQKLVSAGIVQMK*S 176
>gb|CW427101.1|CW427101 fsbb001f138o15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f138o15, DNA
sequence
Length = 596
Score = 81.3 bits (171), Expect(3) = 6e-025
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -1 / +3
Query: 295 QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*T 176
QVL D QENPRAAQ HLKNPGVMQKIQKLVSAGIVQM+*+
Sbjct: 333 QVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR*S 452
Score = 69.3 bits (145), Expect(3) = 8e-022
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3 / -2
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTC 296
+ I*TIPALTSF IFCITPGF RC+ AA GFS +S+ TC
Sbjct: 448 HLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSISTC 332
Score = 46.0 bits (94), Expect(3) = 6e-025
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -1 / +1
Query: 436 LDGVRRCVEQITKASRGELSEEELKERQ 353
L + RC+EQI KA+RGE+S++EL+ERQ
Sbjct: 16 LGDICRCIEQINKANRGEISQDELQERQ 99
Score = 37.3 bits (75), Expect(3) = 8e-022
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 291 TCCMIGSVRMFWISG 335
TC MIGSVRMFWISG
Sbjct: 253 TCRMIGSVRMFWISG 209
Score = 35.0 bits (70), Expect(3) = 8e-022
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / -3
Query: 353 LSLFQFLLTEFASARLGDLFNTP 421
LS QF+LT F S L DLFNTP
Sbjct: 99 LSFLQFVLTYFTSVGLVDLFNTP 31
Score = 24.9 bits (48), Expect(3) = 6e-025
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 354 RTKPCKTLRSRT 319
RTK CKT RSRT
Sbjct: 190 RTKLCKTQRSRT 225
>gb|AW563203.1|AW563203 LG1_204_F11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 81.3 bits (171), Expect(2) = 2e-022
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = -1 / +3
Query: 379 SEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSA 200
+E + KE A DPE+Q IL DP+M++VL++L NP A QA++K+P +M IQKL++A
Sbjct: 321 NEADDKEAMAAAANDPELQRILGDPMMKKVLSELGSNPAAVQAYMKDPVIMNNIQKLIAA 500
Query: 199 GIVQMK* 179
GI+++K*
Sbjct: 501 GIIKVK* 521
Score = 44.6 bits (91), Expect(2) = 2e-022
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRG 386
LETY+ GLK P N+EL +G+RR +E I K G
Sbjct: 216 LETYEQGLKVEPNNEELNEGLRRTMEAINKRQEG 317
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 538,152,982
Number of Sequences: 832831
Number of extensions: 6819706
Number of successful extensions: 112140
Number of sequences better than 1.0e-020: 29
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 12921823404
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)