TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3438088.2.1
(615 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW407798.1|CW407798 fsbb001f101g18k0 Sorghum methylation... 221 7e-075
gb|CW212992.1|CW212992 104_644_11191313_116_37026_073 Sorgh... 221 7e-075
gb|CW407797.1|CW407797 fsbb001f101g18f0 Sorghum methylation... 221 1e-074
gb|CW159691.1|CW159691 104_566_11149490_148_36423_015 Sorgh... 221 3e-069
gb|CW163891.1|CW163891 104_571_11151698_116_36456_003 Sorgh... 221 1e-066
gb|CN134485.1|CN134485 OX1_26_D08.g1_A002 Oxidatively-stres... 165 3e-044
gb|CN124667.1|CN124667 RHOH1_6_E05.b1_A002 Acid- and alkali... 165 5e-044
gb|CL175875.1|CL175875 104_381_10892754_116_31765_354 Sorgh... 165 5e-044
gb|BG048182.1|BG048182 OV1_28_F10.g1_A002 Ovary 1 (OV1) Sor... 165 5e-044
gb|AW745132.1|AW745132 LG1_386_A11.g1_A002 Light Grown 1 (L... 165 5e-044
gb|AW746192.1|AW746192 WS1_40_A04.b1_A002 Water-stressed 1 ... 165 5e-044
gb|CD220430.1|CD220430 CCC1_67_H06.b1_A007 Callus culture/c... 148 2e-040
gb|CW164356.1|CW164356 104_572_11151945_148_36462_041 Sorgh... 147 3e-040
gb|CX617846.1|CX617846 GABR1_36_D11.b1_A002 GA- or brassino... 147 3e-040
gb|CX619537.1|CX619537 GABR1_46_D02.b1_A002 GA- or brassino... 147 3e-040
gb|CW022238.1|CW022238 104_161_10431724_1_30006 Sorghum met... 147 3e-040
gb|CW236952.1|CW236952 104_693_11215895_148_37519_094 Sorgh... 147 3e-040
gb|BE357367.1|BE357367 DG1_148_A07.g1_A002 Dark Grown 1 (DG... 147 3e-040
gb|CX616301.1|CX616301 GABR1_27_D03.b1_A002 GA- or brassino... 147 3e-040
gb|CW388822.1|CW388822 fsbb001f073l23f0 Sorghum methylation... 147 3e-040
gb|CW212993.1|CW212993 104_644_11191313_148_37027_073 Sorgh... 103 5e-040
gb|CX613114.1|CX613114 GABR1_6_G11.b1_A002 GA- or brassinol... 147 1e-039
gb|CF071078.1|CF071078 FE1_15_D12.b1_A002 Iron-deficient se... 144 2e-039
gb|CD205740.1|CD205740 HS1_18_E08.b1_A012 Heat-shocked seed... 144 2e-039
gb|CX611325.1|CX611325 ANR1_24_B05.b1_A002 Anaerobic roots ... 145 3e-039
gb|BG054019.1|BG054019 OV2_1_C08.g1_A002 Ovary 2 (OV2) Sorg... 138 3e-036
gb|CL175876.1|CL175876 104_381_10892754_148_31764_354 Sorgh... 135 3e-035
gb|BF481319.1|BF481319 FM1_18_E02.g1_A003 Floral-Induced Me... 135 3e-035
gb|BG101880.1|BG101880 RHIZ2_23_E10.g1_A003 Rhizome2 (RHIZ2... 135 3e-035
gb|CF071090.1|CF071090 FE1_15_F06.b1_A002 Iron-deficient se... 141 2e-034
gb|BG948189.1|BG948189 IP1_10_D12.g1_A002 Immature pannicle... 128 4e-033
gb|CW216644.1|CW216644 104_649_11195227_116_37125_072 Sorgh... 136 3e-031
gb|CW451021.1|CW451021 fsbb001f189o18k0 Sorghum methylation... 136 3e-031
gb|DR831463.2|DR831463 MM79 Sorghum bicolor greenbug-respon... 128 7e-031
gb|BF481389.1|BF481389 FM1_18_E02.b1_A003 Floral-Induced Me... 120 2e-026
gb|BG241569.1|BG241569 RHIZ2_17_B11.g1_A003 Rhizome2 (RHIZ2... 100 6e-025
>gb|CW407798.1|CW407798 fsbb001f101g18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101g18, DNA
sequence
Length = 838
Score = 221 bits (477), Expect(4) = 7e-075
Identities = 93/99 (93%), Positives = 94/99 (94%)
Frame = +3 / +2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
PWPSPDKATNAATRPALP SVASV*L*FLRASLN SWRSGPATMAP M+LGFGFL SLHF
Sbjct: 443 PWPSPDKATNAATRPALPTSVASV*L*FLRASLNLSWRSGPATMAPTMILGFGFLVSLHF 622
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
HPPLQP**TPFLGIEAPRW*TCLG* FPNPTT*LIFKGF
Sbjct: 623 HPPLQP**TPFLGIEAPRW*TCLG*WFPNPTT*LIFKGF 739
Score = 189 bits (407), Expect(3) = 4e-064
Identities = 72/99 (72%), Positives = 74/99 (74%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG YP+HVHHRGASIPKNGVHYGCKGGWKWRD KKPNPN I GAMVAGP
Sbjct: 738 NPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNIIVGAMVAGP 559
Query: 433 DRHDGFKDARRNYNYTEXXXXXXXXXXXXXXXXXXXGHG 317
DRHD FKDAR+NYNYTE GHG
Sbjct: 558 DRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 442
Score = 187 bits (403), Expect(3) = 6e-056
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = -2 / -1
Query: 614 ESFEDELRGWVRKALPQACSPPGRLDP*ERCSLWLQRRVEVEGRQEAKP*YHSRCHGCWX 435
ESFEDEL GWV K LPQACSPPGRL+P*E CSLWLQRRVEVEG QEAKP*YHSR HGCW
Sbjct: 739 ESFEDELCGWVWKPLPQACSPPGRLNP*EWCSLWLQRRVEVEGHQEAKP*YHSRGHGCWP 560
Query: 434 XXXXRVQRCPQELQLH*SNAGGQRWSSRRIGSFVG*RPRRG 312
+VQRCPQEL LH*SN G Q WSSR IGSFV *RPR G
Sbjct: 559 *SP*QVQRCPQEL*LH*SNTGRQCWSSRSIGSFVW*RPRGG 437
Score = 184 bits (397), Expect(2) = 5e-047
Identities = 77/98 (78%), Positives = 85/98 (86%)
Frame = +2 / +1
Query: 320 VAVTRQSYQCGD*TSVARQRCFSVVVVPAGIFEPVMAVGASNHGTCYGIRVWLLGVPPLP 499
VA TRQSYQC D*TS+A Q CFSVV++ AGIFEPVMA+ ASNHG Y IRVWLLGVPPLP
Sbjct: 445 VAFTRQSYQCCD*TSIAYQCCFSVVIILAGIFEPVMAIRASNHGPYYDIRVWLLGVPPLP 624
Query: 500 PSFAAIVNTVLRDRGAPVVNMPGVTLSEPNHVAHLQRI 613
PSFA IVNT+LRD GAPVVNM GV +S+PNH+AHLQRI
Sbjct: 625 PSFATIVNTILRD*GAPVVNMLGVMVSKPNHIAHLQRI 738
Score = 169 bits (364), Expect(2) = 6e-043
Identities = 77/99 (77%), Positives = 80/99 (80%)
Frame = -1 / -3
Query: 615 RIL*R*ATWLGSESVTPGMFTTGAPRSLRTVFTMAAKEGGSGGTPRSQTLIP*QVPWLLA 436
RIL*R*A WLG E++TP MFTTGAP+SLR VFTM AKEGGSGGTPRSQTLI * PWLLA
Sbjct: 740 RIL*R*AMWLGLETITPSMFTTGAPQSLRMVFTMVAKEGGSGGTPRSQTLIS**GPWLLA 561
Query: 435 PTAMTGSKMPAGTTTTLKQRWRATLV*SPHW*LCRVTAT 319
AMTGSKMPA TTLKQ W A LV*S HW*LC V AT
Sbjct: 560 LIAMTGSKMPARIITTLKQHW*AMLV*SQHW*LCLVKAT 444
Score = 123 bits (263), Expect(3) = 2e-034
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +1 / +3
Query: 313 PRRGRHPTKLPMRRLDQRCPPALLQCSCSSCGHL*TRHGGRGQQPWHLLWY*GLASWRPS 492
P RG H TKLPM RLDQ C P LLQCS +SCGHL*T HG +GQQPW LL Y*GLASW PS
Sbjct: 438 PPRGLHQTKLPMLRLDQHCLPVLLQCSYNSCGHL*TCHGDQGQQPWPLL*Y*GLASWCPS 617
Query: 493 TSTLLC 510
TSTLLC
Sbjct: 618 TSTLLC 635
Score = 59.3 bits (123), Expect(3) = 4e-064
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 317 RGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
RGGQE +VLCSTAHVPF SAA G MET+ A G
Sbjct: 445 RGGQECYVLCSTAHVPFPSAATGPMETIMAVG 350
Score = 58.8 bits (122), Expect(4) = 7e-075
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPR 318
P A+ VSM P AAE KGTWAVLQRT SCPPR
Sbjct: 351 PTAIMVSMGPVAAEGKGTWAVLQRT*HSCPPR 446
Score = 46.0 bits (94), Expect(3) = 6e-056
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 315 GWTRTPCSLQYRPCSXXXXXXXLHGNRDG 229
GWTR CSLQYRPCS HGN +G
Sbjct: 443 GWTRMLCSLQYRPCSLPLRRHRPHGNHNG 357
Score = 40.5 bits (82), Expect(3) = 2e-034
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 562 AWGNAFRTQPRSSSSKDS 615
AWGN F+TQP SSSSKDS
Sbjct: 687 AWGNGFQTQPHSSSSKDS 740
Score = 37.3 bits (75), Expect(4) = 7e-075
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 88 KKDRSYILLDLHDCDGSSTAR 150
+KDR YIL +LHD DG+S AR
Sbjct: 246 RKDRGYILSELHDSDGTSKAR 308
Score = 36.3 bits (73), Expect(3) = 4e-064
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3 / -2
Query: 181 FIYLDLD*CSLSPYCYHHNHGDLTVCSSGLFFHCFYILPC 62
F+Y LSPY YHH G LT CS LF + C
Sbjct: 339 FVYCVFRLVLLSPY*YHHYRGVLTRCSLDLFLFLSLLYIC 220
Score = 26.3 bits (51), Expect(2) = 5e-047
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 86 KKKTGATYC*ISMIVMVAVRRE 151
++K AT C S IVMV VRRE
Sbjct: 244 QEKIEATSCQNSTIVMVLVRRE 309
Score = 25.8 bits (50), Expect(2) = 6e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 316 GVDKNTMFSAV 284
GVDKN MFSAV
Sbjct: 444 GVDKNAMFSAV 412
Score = 24.0 bits (46), Expect(3) = 6e-056
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 205 VSDSFVYCFIYLDL 164
VSDSFVYC L L
Sbjct: 351 VSDSFVYCVFRLVL 310
Score = 24.0 bits (46), Expect(3) = 2e-034
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 87 KKRPELHTVRSP*L*W 134
KKR LH VR+P *W
Sbjct: 245 KKRSRLHLVRTPR**W 292
Score = 22.1 bits (42), Expect(4) = 7e-075
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 183 QYTKESDT 206
QYTKESDT
Sbjct: 329 QYTKESDT 352
>gb|CW212992.1|CW212992 104_644_11191313_116_37026_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191313, DNA
sequence
Length = 633
Score = 221 bits (477), Expect(4) = 7e-075
Identities = 93/99 (93%), Positives = 94/99 (94%)
Frame = +3 / -3
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
PWPSPDKATNAATRPALP SVASV*L*FLRASLN SWRSGPATMAP M+LGFGFL SLHF
Sbjct: 346 PWPSPDKATNAATRPALPTSVASV*L*FLRASLNLSWRSGPATMAPTMILGFGFLVSLHF 167
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
HPPLQP**TPFLGIEAPRW*TCLG* FPNPTT*LIFKGF
Sbjct: 166 HPPLQP**TPFLGIEAPRW*TCLG*WFPNPTT*LIFKGF 50
Score = 189 bits (407), Expect(3) = 4e-064
Identities = 72/99 (72%), Positives = 74/99 (74%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG YP+HVHHRGASIPKNGVHYGCKGGWKWRD KKPNPN I GAMVAGP
Sbjct: 51 NPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNIIVGAMVAGP 230
Query: 433 DRHDGFKDARRNYNYTEXXXXXXXXXXXXXXXXXXXGHG 317
DRHD FKDAR+NYNYTE GHG
Sbjct: 231 DRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 347
Score = 187 bits (403), Expect(3) = 6e-056
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = -2 / +2
Query: 614 ESFEDELRGWVRKALPQACSPPGRLDP*ERCSLWLQRRVEVEGRQEAKP*YHSRCHGCWX 435
ESFEDEL GWV K LPQACSPPGRL+P*E CSLWLQRRVEVEG QEAKP*YHSR HGCW
Sbjct: 50 ESFEDELCGWVWKPLPQACSPPGRLNP*EWCSLWLQRRVEVEGHQEAKP*YHSRGHGCWP 229
Query: 434 XXXXRVQRCPQELQLH*SNAGGQRWSSRRIGSFVG*RPRRG 312
+VQRCPQEL LH*SN G Q WSSR IGSFV *RPR G
Sbjct: 230 *SP*QVQRCPQEL*LH*SNTGRQCWSSRSIGSFVW*RPRGG 352
Score = 184 bits (397), Expect(2) = 4e-047
Identities = 77/98 (78%), Positives = 85/98 (86%)
Frame = +2 / -2
Query: 320 VAVTRQSYQCGD*TSVARQRCFSVVVVPAGIFEPVMAVGASNHGTCYGIRVWLLGVPPLP 499
VA TRQSYQC D*TS+A Q CFSVV++ AGIFEPVMA+ ASNHG Y IRVWLLGVPPLP
Sbjct: 344 VAFTRQSYQCCD*TSIAYQCCFSVVIILAGIFEPVMAIRASNHGPYYDIRVWLLGVPPLP 165
Query: 500 PSFAAIVNTVLRDRGAPVVNMPGVTLSEPNHVAHLQRI 613
PSFA IVNT+LRD GAPVVNM GV +S+PNH+AHLQRI
Sbjct: 164 PSFATIVNTILRD*GAPVVNMLGVMVSKPNHIAHLQRI 51
Score = 169 bits (364), Expect(2) = 6e-043
Identities = 77/99 (77%), Positives = 80/99 (80%)
Frame = -1 / +1
Query: 615 RIL*R*ATWLGSESVTPGMFTTGAPRSLRTVFTMAAKEGGSGGTPRSQTLIP*QVPWLLA 436
RIL*R*A WLG E++TP MFTTGAP+SLR VFTM AKEGGSGGTPRSQTLI * PWLLA
Sbjct: 49 RIL*R*AMWLGLETITPSMFTTGAPQSLRMVFTMVAKEGGSGGTPRSQTLIS**GPWLLA 228
Query: 435 PTAMTGSKMPAGTTTTLKQRWRATLV*SPHW*LCRVTAT 319
AMTGSKMPA TTLKQ W A LV*S HW*LC V AT
Sbjct: 229 LIAMTGSKMPARIITTLKQHW*AMLV*SQHW*LCLVKAT 345
Score = 123 bits (263), Expect(3) = 1e-034
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +1 / -1
Query: 313 PRRGRHPTKLPMRRLDQRCPPALLQCSCSSCGHL*TRHGGRGQQPWHLLWY*GLASWRPS 492
P RG H TKLPM RLDQ C P LLQCS +SCGHL*T HG +GQQPW LL Y*GLASW PS
Sbjct: 351 PPRGLHQTKLPMLRLDQHCLPVLLQCSYNSCGHL*TCHGDQGQQPWPLL*Y*GLASWCPS 172
Query: 493 TSTLLC 510
TSTLLC
Sbjct: 171 TSTLLC 154
Score = 59.3 bits (123), Expect(3) = 4e-064
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2 / +2
Query: 317 RGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
RGGQE +VLCSTAHVPF SAA G MET+ A G
Sbjct: 344 RGGQECYVLCSTAHVPFPSAATGPMETIMAVG 439
Score = 58.8 bits (122), Expect(4) = 7e-075
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1 / -1
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPR 318
P A+ VSM P AAE KGTWAVLQRT SCPPR
Sbjct: 438 PTAIMVSMGPVAAEGKGTWAVLQRT*HSCPPR 343
Score = 46.0 bits (94), Expect(3) = 6e-056
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 315 GWTRTPCSLQYRPCSXXXXXXXLHGNRDG 229
GWTR CSLQYRPCS HGN +G
Sbjct: 346 GWTRMLCSLQYRPCSLPLRRHRPHGNHNG 432
Score = 40.5 bits (82), Expect(3) = 1e-034
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 562 AWGNAFRTQPRSSSSKDS 615
AWGN F+TQP SSSSKDS
Sbjct: 102 AWGNGFQTQPHSSSSKDS 49
Score = 37.3 bits (75), Expect(4) = 7e-075
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / -1
Query: 88 KKDRSYILLDLHDCDGSSTAR 150
+KDR YIL +LHD DG+S AR
Sbjct: 543 RKDRGYILSELHDSDGTSKAR 481
Score = 36.3 bits (73), Expect(3) = 4e-064
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3 / +3
Query: 181 FIYLDLD*CSLSPYCYHHNHGDLTVCSSGLFFHCFYILPC 62
F+Y LSPY YHH G LT CS LF + C
Sbjct: 450 FVYCVFRLVLLSPY*YHHYRGVLTRCSLDLFLFLSLLYIC 569
Score = 26.3 bits (51), Expect(2) = 4e-047
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 86 KKKTGATYC*ISMIVMVAVRRE 151
++K AT C S IVMV VRRE
Sbjct: 545 QEKIEATSCQNSTIVMVLVRRE 480
Score = 25.8 bits (50), Expect(2) = 6e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 316 GVDKNTMFSAV 284
GVDKN MFSAV
Sbjct: 345 GVDKNAMFSAV 377
Score = 24.0 bits (46), Expect(3) = 6e-056
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 205 VSDSFVYCFIYLDL 164
VSDSFVYC L L
Sbjct: 438 VSDSFVYCVFRLVL 479
Score = 24.0 bits (46), Expect(3) = 1e-034
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / -3
Query: 87 KKRPELHTVRSP*L*W 134
KKR LH VR+P *W
Sbjct: 544 KKRSRLHLVRTPR**W 497
Score = 22.1 bits (42), Expect(4) = 7e-075
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 183 QYTKESDT 206
QYTKESDT
Sbjct: 460 QYTKESDT 437
>gb|CW407797.1|CW407797 fsbb001f101g18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101g18, DNA
sequence
Length = 731
Score = 221 bits (477), Expect(4) = 1e-074
Identities = 93/99 (93%), Positives = 94/99 (94%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
PWPSPDKATNAATRPALP SVASV*L*FLRASLN SWRSGPATMAP M+LGFGFL SLHF
Sbjct: 535 PWPSPDKATNAATRPALPTSVASV*L*FLRASLNLSWRSGPATMAPTMILGFGFLVSLHF 356
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
HPPLQP**TPFLGIEAPRW*TCLG* FPNPTT*LIFKGF
Sbjct: 355 HPPLQP**TPFLGIEAPRW*TCLG*WFPNPTT*LIFKGF 239
Score = 189 bits (407), Expect(3) = 8e-064
Identities = 72/99 (72%), Positives = 74/99 (74%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG YP+HVHHRGASIPKNGVHYGCKGGWKWRD KKPNPN I GAMVAGP
Sbjct: 240 NPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNIIVGAMVAGP 419
Query: 433 DRHDGFKDARRNYNYTEXXXXXXXXXXXXXXXXXXXGHG 317
DRHD FKDAR+NYNYTE GHG
Sbjct: 420 DRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 536
Score = 187 bits (403), Expect(3) = 6e-056
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = -2 / +2
Query: 614 ESFEDELRGWVRKALPQACSPPGRLDP*ERCSLWLQRRVEVEGRQEAKP*YHSRCHGCWX 435
ESFEDEL GWV K LPQACSPPGRL+P*E CSLWLQRRVEVEG QEAKP*YHSR HGCW
Sbjct: 239 ESFEDELCGWVWKPLPQACSPPGRLNP*EWCSLWLQRRVEVEGHQEAKP*YHSRGHGCWP 418
Query: 434 XXXXRVQRCPQELQLH*SNAGGQRWSSRRIGSFVG*RPRRG 312
+VQRCPQEL LH*SN G Q WSSR IGSFV *RPR G
Sbjct: 419 *SP*QVQRCPQEL*LH*SNTGRQCWSSRSIGSFVW*RPRGG 541
Score = 184 bits (397), Expect(2) = 6e-047
Identities = 77/98 (78%), Positives = 85/98 (86%)
Frame = +2 / -1
Query: 320 VAVTRQSYQCGD*TSVARQRCFSVVVVPAGIFEPVMAVGASNHGTCYGIRVWLLGVPPLP 499
VA TRQSYQC D*TS+A Q CFSVV++ AGIFEPVMA+ ASNHG Y IRVWLLGVPPLP
Sbjct: 533 VAFTRQSYQCCD*TSIAYQCCFSVVIILAGIFEPVMAIRASNHGPYYDIRVWLLGVPPLP 354
Query: 500 PSFAAIVNTVLRDRGAPVVNMPGVTLSEPNHVAHLQRI 613
PSFA IVNT+LRD GAPVVNM GV +S+PNH+AHLQRI
Sbjct: 353 PSFATIVNTILRD*GAPVVNMLGVMVSKPNHIAHLQRI 240
Score = 169 bits (364), Expect(2) = 6e-043
Identities = 77/99 (77%), Positives = 80/99 (80%)
Frame = -1 / +1
Query: 615 RIL*R*ATWLGSESVTPGMFTTGAPRSLRTVFTMAAKEGGSGGTPRSQTLIP*QVPWLLA 436
RIL*R*A WLG E++TP MFTTGAP+SLR VFTM AKEGGSGGTPRSQTLI * PWLLA
Sbjct: 238 RIL*R*AMWLGLETITPSMFTTGAPQSLRMVFTMVAKEGGSGGTPRSQTLIS**GPWLLA 417
Query: 435 PTAMTGSKMPAGTTTTLKQRWRATLV*SPHW*LCRVTAT 319
AMTGSKMPA TTLKQ W A LV*S HW*LC V AT
Sbjct: 418 LIAMTGSKMPARIITTLKQHW*AMLV*SQHW*LCLVKAT 534
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +1 / -3
Query: 313 PRRGRHPTKLPMRRLDQRCPPALLQCSCSSCGHL*TRHGGRGQQPWHLLWY*GLASWRPS 492
P RG H TKLPM RLDQ C P LLQCS +SCGHL*T HG +GQQPW LL Y*GLASW PS
Sbjct: 540 PPRGLHQTKLPMLRLDQHCLPVLLQCSYNSCGHL*TCHGDQGQQPWPLL*Y*GLASWCPS 361
Query: 493 TSTLLC 510
TSTLLC
Sbjct: 360 TSTLLC 343
Score = 59.3 bits (123), Expect(3) = 8e-064
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2 / +2
Query: 317 RGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
RGGQE +VLCSTAHVPF SAA G MET+ A G
Sbjct: 533 RGGQECYVLCSTAHVPFPSAATGPMETIMAVG 628
Score = 58.8 bits (122), Expect(4) = 1e-074
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPR 318
P A+ VSM P AAE KGTWAVLQRT SCPPR
Sbjct: 627 PTAIMVSMGPVAAEGKGTWAVLQRT*HSCPPR 532
Score = 46.0 bits (94), Expect(3) = 6e-056
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 315 GWTRTPCSLQYRPCSXXXXXXXLHGNRDG 229
GWTR CSLQYRPCS HGN +G
Sbjct: 535 GWTRMLCSLQYRPCSLPLRRHRPHGNHNG 621
Score = 40.5 bits (82), Expect(2) = 2e-033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 562 AWGNAFRTQPRSSSSKDS 615
AWGN F+TQP SSSSKDS
Sbjct: 291 AWGNGFQTQPHSSSSKDS 238
Score = 36.3 bits (73), Expect(4) = 1e-074
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / -3
Query: 91 KDRSYILLDLHDCDGSSTAR 150
KDR YIL +LHD DG+S AR
Sbjct: 729 KDRGYILSELHDSDGTSKAR 670
Score = 35.4 bits (71), Expect(3) = 8e-064
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -3 / +3
Query: 181 FIYLDLD*CSLSPYCYHHNHGDLTVCSSGLF 89
F+Y LSPY YHH G LT CS LF
Sbjct: 639 FVYCVFRLVLLSPY*YHHYRGVLTRCSLDLF 731
Score = 25.8 bits (50), Expect(2) = 6e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 316 GVDKNTMFSAV 284
GVDKN MFSAV
Sbjct: 534 GVDKNAMFSAV 566
Score = 25.8 bits (50), Expect(2) = 6e-047
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 89 KKTGATYC*ISMIVMVAVRRE 151
+K AT C S IVMV VRRE
Sbjct: 731 EKIEATSCQNSTIVMVLVRRE 669
Score = 24.0 bits (46), Expect(3) = 6e-056
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 205 VSDSFVYCFIYLDL 164
VSDSFVYC L L
Sbjct: 627 VSDSFVYCVFRLVL 668
Score = 22.1 bits (42), Expect(4) = 1e-074
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 183 QYTKESDT 206
QYTKESDT
Sbjct: 649 QYTKESDT 626
>gb|CW159691.1|CW159691 104_566_11149490_148_36423_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149490, DNA
sequence
Length = 659
Score = 221 bits (477), Expect(3) = 3e-069
Identities = 93/99 (93%), Positives = 94/99 (94%)
Frame = +3 / +3
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
PWPSPDKATNAATRPALP SVASV*L*FLRASLN SWRSGPATMAP M+LGFGFL SLHF
Sbjct: 123 PWPSPDKATNAATRPALPTSVASV*L*FLRASLNLSWRSGPATMAPTMILGFGFLVSLHF 302
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
HPPLQP**TPFLGIEAPRW*TCLG* FPNPTT*LIFKGF
Sbjct: 303 HPPLQP**TPFLGIEAPRW*TCLG*WFPNPTT*LIFKGF 419
Score = 189 bits (407), Expect(3) = 4e-060
Identities = 72/99 (72%), Positives = 74/99 (74%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG YP+HVHHRGASIPKNGVHYGCKGGWKWRD KKPNPN I GAMVAGP
Sbjct: 418 NPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNIIVGAMVAGP 239
Query: 433 DRHDGFKDARRNYNYTEXXXXXXXXXXXXXXXXXXXGHG 317
DRHD FKDAR+NYNYTE GHG
Sbjct: 238 DRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 122
Score = 187 bits (403), Expect(2) = 3e-054
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = -2 / -1
Query: 614 ESFEDELRGWVRKALPQACSPPGRLDP*ERCSLWLQRRVEVEGRQEAKP*YHSRCHGCWX 435
ESFEDEL GWV K LPQACSPPGRL+P*E CSLWLQRRVEVEG QEAKP*YHSR HGCW
Sbjct: 419 ESFEDELCGWVWKPLPQACSPPGRLNP*EWCSLWLQRRVEVEGHQEAKP*YHSRGHGCWP 240
Query: 434 XXXXRVQRCPQELQLH*SNAGGQRWSSRRIGSFVG*RPRRG 312
+VQRCPQEL LH*SN G Q WSSR IGSFV *RPR G
Sbjct: 239 *SP*QVQRCPQEL*LH*SNTGRQCWSSRSIGSFVW*RPRGG 117
Score = 184 bits (397), Expect = 8e-046
Identities = 77/98 (78%), Positives = 85/98 (86%)
Frame = +2 / +2
Query: 320 VAVTRQSYQCGD*TSVARQRCFSVVVVPAGIFEPVMAVGASNHGTCYGIRVWLLGVPPLP 499
VA TRQSYQC D*TS+A Q CFSVV++ AGIFEPVMA+ ASNHG Y IRVWLLGVPPLP
Sbjct: 125 VAFTRQSYQCCD*TSIAYQCCFSVVIILAGIFEPVMAIRASNHGPYYDIRVWLLGVPPLP 304
Query: 500 PSFAAIVNTVLRDRGAPVVNMPGVTLSEPNHVAHLQRI 613
PSFA IVNT+LRD GAPVVNM GV +S+PNH+AHLQRI
Sbjct: 305 PSFATIVNTILRD*GAPVVNMLGVMVSKPNHIAHLQRI 418
Score = 169 bits (364), Expect(2) = 6e-043
Identities = 77/99 (77%), Positives = 80/99 (80%)
Frame = -1 / -3
Query: 615 RIL*R*ATWLGSESVTPGMFTTGAPRSLRTVFTMAAKEGGSGGTPRSQTLIP*QVPWLLA 436
RIL*R*A WLG E++TP MFTTGAP+SLR VFTM AKEGGSGGTPRSQTLI * PWLLA
Sbjct: 420 RIL*R*AMWLGLETITPSMFTTGAPQSLRMVFTMVAKEGGSGGTPRSQTLIS**GPWLLA 241
Query: 435 PTAMTGSKMPAGTTTTLKQRWRATLV*SPHW*LCRVTAT 319
AMTGSKMPA TTLKQ W A LV*S HW*LC V AT
Sbjct: 240 LIAMTGSKMPARIITTLKQHW*AMLV*SQHW*LCLVKAT 124
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +1 / +1
Query: 313 PRRGRHPTKLPMRRLDQRCPPALLQCSCSSCGHL*TRHGGRGQQPWHLLWY*GLASWRPS 492
P RG H TKLPM RLDQ C P LLQCS +SCGHL*T HG +GQQPW LL Y*GLASW PS
Sbjct: 118 PPRGLHQTKLPMLRLDQHCLPVLLQCSYNSCGHL*TCHGDQGQQPWPLL*Y*GLASWCPS 297
Query: 493 TSTLLC 510
TSTLLC
Sbjct: 298 TSTLLC 315
Score = 59.3 bits (123), Expect(3) = 4e-060
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 317 RGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
RGGQE +VLCSTAHVPF SAA G MET+ A G
Sbjct: 125 RGGQECYVLCSTAHVPFPSAATGPMETIMAVG 30
Score = 58.8 bits (122), Expect(3) = 3e-069
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPR 318
P A+ VSM P AAE KGTWAVLQRT SCPPR
Sbjct: 31 PTAIMVSMGPVAAEGKGTWAVLQRT*HSCPPR 126
Score = 46.0 bits (94), Expect(2) = 3e-054
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 315 GWTRTPCSLQYRPCSXXXXXXXLHGNRDG 229
GWTR CSLQYRPCS HGN +G
Sbjct: 123 GWTRMLCSLQYRPCSLPLRRHRPHGNHNG 37
Score = 40.5 bits (82), Expect(2) = 2e-033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 562 AWGNAFRTQPRSSSSKDS 615
AWGN F+TQP SSSSKDS
Sbjct: 367 AWGNGFQTQPHSSSSKDS 420
Score = 25.8 bits (50), Expect(2) = 6e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 316 GVDKNTMFSAV 284
GVDKN MFSAV
Sbjct: 124 GVDKNAMFSAV 92
Score = 23.1 bits (44), Expect(3) = 4e-060
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -2
Query: 205 VSDSFVYC 182
VSDSFVYC
Sbjct: 31 VSDSFVYC 8
Score = 22.1 bits (42), Expect(3) = 3e-069
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 183 QYTKESDT 206
QYTKESDT
Sbjct: 9 QYTKESDT 32
>gb|CW163891.1|CW163891 104_571_11151698_116_36456_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151698, DNA
sequence
Length = 692
Score = 221 bits (477), Expect(2) = 1e-066
Identities = 93/99 (93%), Positives = 94/99 (94%)
Frame = +3 / +2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
PWPSPDKATNAATRPALP SVASV*L*FLRASLN SWRSGPATMAP M+LGFGFL SLHF
Sbjct: 80 PWPSPDKATNAATRPALPTSVASV*L*FLRASLNLSWRSGPATMAPTMILGFGFLVSLHF 259
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
HPPLQP**TPFLGIEAPRW*TCLG* FPNPTT*LIFKGF
Sbjct: 260 HPPLQP**TPFLGIEAPRW*TCLG*WFPNPTT*LIFKGF 376
Score = 189 bits (407), Expect(2) = 3e-057
Identities = 72/99 (72%), Positives = 74/99 (74%)
Frame = -3 / -3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG YP+HVHHRGASIPKNGVHYGCKGGWKWRD KKPNPN I GAMVAGP
Sbjct: 375 NPLKMSYVVGFGNHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKKPNPNIIVGAMVAGP 196
Query: 433 DRHDGFKDARRNYNYTEXXXXXXXXXXXXXXXXXXXGHG 317
DRHD FKDAR+NYNYTE GHG
Sbjct: 195 DRHDRFKDARKNYNYTEATLVGNAGLVAALVALSGEGHG 79
Score = 187 bits (403), Expect(2) = 2e-053
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = -2 / -2
Query: 614 ESFEDELRGWVRKALPQACSPPGRLDP*ERCSLWLQRRVEVEGRQEAKP*YHSRCHGCWX 435
ESFEDEL GWV K LPQACSPPGRL+P*E CSLWLQRRVEVEG QEAKP*YHSR HGCW
Sbjct: 376 ESFEDELCGWVWKPLPQACSPPGRLNP*EWCSLWLQRRVEVEGHQEAKP*YHSRGHGCWP 197
Query: 434 XXXXRVQRCPQELQLH*SNAGGQRWSSRRIGSFVG*RPRRG 312
+VQRCPQEL LH*SN G Q WSSR IGSFV *RPR G
Sbjct: 196 *SP*QVQRCPQEL*LH*SNTGRQCWSSRSIGSFVW*RPRGG 74
Score = 184 bits (397), Expect = 8e-046
Identities = 77/98 (78%), Positives = 85/98 (86%)
Frame = +2 / +1
Query: 320 VAVTRQSYQCGD*TSVARQRCFSVVVVPAGIFEPVMAVGASNHGTCYGIRVWLLGVPPLP 499
VA TRQSYQC D*TS+A Q CFSVV++ AGIFEPVMA+ ASNHG Y IRVWLLGVPPLP
Sbjct: 82 VAFTRQSYQCCD*TSIAYQCCFSVVIILAGIFEPVMAIRASNHGPYYDIRVWLLGVPPLP 261
Query: 500 PSFAAIVNTVLRDRGAPVVNMPGVTLSEPNHVAHLQRI 613
PSFA IVNT+LRD GAPVVNM GV +S+PNH+AHLQRI
Sbjct: 262 PSFATIVNTILRD*GAPVVNMLGVMVSKPNHIAHLQRI 375
Score = 169 bits (364), Expect(2) = 6e-043
Identities = 77/99 (77%), Positives = 80/99 (80%)
Frame = -1 / -1
Query: 615 RIL*R*ATWLGSESVTPGMFTTGAPRSLRTVFTMAAKEGGSGGTPRSQTLIP*QVPWLLA 436
RIL*R*A WLG E++TP MFTTGAP+SLR VFTM AKEGGSGGTPRSQTLI * PWLLA
Sbjct: 377 RIL*R*AMWLGLETITPSMFTTGAPQSLRMVFTMVAKEGGSGGTPRSQTLIS**GPWLLA 198
Query: 435 PTAMTGSKMPAGTTTTLKQRWRATLV*SPHW*LCRVTAT 319
AMTGSKMPA TTLKQ W A LV*S HW*LC V AT
Sbjct: 197 LIAMTGSKMPARIITTLKQHW*AMLV*SQHW*LCLVKAT 81
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +1 / +3
Query: 313 PRRGRHPTKLPMRRLDQRCPPALLQCSCSSCGHL*TRHGGRGQQPWHLLWY*GLASWRPS 492
P RG H TKLPM RLDQ C P LLQCS +SCGHL*T HG +GQQPW LL Y*GLASW PS
Sbjct: 75 PPRGLHQTKLPMLRLDQHCLPVLLQCSYNSCGHL*TCHGDQGQQPWPLL*Y*GLASWCPS 254
Query: 493 TSTLLC 510
TSTLLC
Sbjct: 255 TSTLLC 272
Score = 54.2 bits (112), Expect(2) = 3e-057
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2 / -2
Query: 317 RGGQEHHVLCSTAHVPFASAAAGSMET 237
RGGQE +VLCSTAHVPF SAA G MET
Sbjct: 82 RGGQECYVLCSTAHVPFPSAATGPMET 2
Score = 53.3 bits (110), Expect(2) = 1e-066
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +1 / +3
Query: 238 VSMEPAAAEAKGTWAVLQRTWCSCPPR 318
VSM P AAE KGTWAVLQRT SCPPR
Sbjct: 3 VSMGPVAAEGKGTWAVLQRT*HSCPPR 83
Score = 42.8 bits (87), Expect(2) = 2e-053
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 315 GWTRTPCSLQYRPCSXXXXXXXLHGN 238
GWTR CSLQYRPCS HGN
Sbjct: 80 GWTRMLCSLQYRPCSLPLRRHRPHGN 3
Score = 40.5 bits (82), Expect(2) = 2e-033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 562 AWGNAFRTQPRSSSSKDS 615
AWGN F+TQP SSSSKDS
Sbjct: 324 AWGNGFQTQPHSSSSKDS 377
Score = 25.8 bits (50), Expect(2) = 6e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 316 GVDKNTMFSAV 284
GVDKN MFSAV
Sbjct: 81 GVDKNAMFSAV 49
>gb|CN134485.1|CN134485 OX1_26_D08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D08_A002 5', mRNA sequence
Length = 814
Score = 165 bits (354), Expect(2) = 3e-044
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGP
Sbjct: 288 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGP 467
Query: 433 DRHDGFKDARRNYNYTE 383
DRHDG+KD R NYNY+E
Sbjct: 468 DRHDGYKDVRTNYNYSE 518
Score = 110 bits (234), Expect(2) = 2e-025
Identities = 55/94 (58%), Positives = 61/94 (64%)
Frame = +3 / -1
Query: 333 DKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQ 512
D +AAT+PA A V S *L*F+R SL PS SGPAT+AP +LGF F SLH PPL
Sbjct: 568 DIEISAATKPAFAARVGSE*L*FVRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLH 389
Query: 513 P**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
P TP GI+AP * G FP PTT*LIF GF
Sbjct: 388 PYLTPL*GIDAPL**GRFGYLFPKPTT*LIFNGF 287
Score = 34.5 bits (69), Expect(2) = 3e-044
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 602 EHHLLCNSSNVPNTPTTAFSMETI 673
Score = 26.7 bits (52), Expect(2) = 2e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1 / -2
Query: 238 VSMEPAAAEAKGTWAVLQRTWCS 306
VSM A GT LQR WCS
Sbjct: 669 VSMLKAVVGVLGTLEELQRRWCS 601
>gb|CN124667.1|CN124667 RHOH1_6_E05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_6_E05_A002 3', mRNA sequence
Length = 826
Score = 165 bits (354), Expect(2) = 5e-044
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGP
Sbjct: 19 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGP 198
Query: 433 DRHDGFKDARRNYNYTE 383
DRHDG+KD R NYNY+E
Sbjct: 199 DRHDGYKDVRTNYNYSE 249
Score = 110 bits (234), Expect(2) = 2e-025
Identities = 55/94 (58%), Positives = 61/94 (64%)
Frame = +3 / -3
Query: 333 DKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQ 512
D +AAT+PA A V S *L*F+R SL PS SGPAT+AP +LGF F SLH PPL
Sbjct: 299 DIEISAATKPAFAARVGSE*L*FVRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLH 120
Query: 513 P**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
P TP GI+AP * G FP PTT*LIF GF
Sbjct: 119 PYLTPL*GIDAPL**GRFGYLFPKPTT*LIFNGF 18
Score = 34.1 bits (68), Expect(2) = 5e-044
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 333 EHHLLCNSSNVPNTPTTAISMETI 404
Score = 26.3 bits (51), Expect(2) = 2e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1 / -1
Query: 238 VSMEPAAAEAKGTWAVLQRTWCS 306
VSM A GT LQR WCS
Sbjct: 400 VSMLMAVVGVLGTLEELQRRWCS 332
>gb|CL175875.1|CL175875 104_381_10892754_116_31765_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892754, DNA
sequence
Length = 733
Score = 165 bits (354), Expect(2) = 5e-044
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGP
Sbjct: 258 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGP 437
Query: 433 DRHDGFKDARRNYNYTE 383
DRHDG+KD R NYNY+E
Sbjct: 438 DRHDGYKDVRTNYNYSE 488
Score = 110 bits (234), Expect(2) = 2e-025
Identities = 55/94 (58%), Positives = 61/94 (64%)
Frame = +3 / -1
Query: 333 DKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQ 512
D +AAT+PA A V S *L*F+R SL PS SGPAT+AP +LGF F SLH PPL
Sbjct: 538 DIEISAATKPAFAARVGSE*L*FVRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLH 359
Query: 513 P**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
P TP GI+AP * G FP PTT*LIF GF
Sbjct: 358 PYLTPL*GIDAPL**GRFGYLFPKPTT*LIFNGF 257
Score = 34.1 bits (68), Expect(2) = 5e-044
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 572 EHHLLCNSSNVPNTPTTAISMETI 643
Score = 26.3 bits (51), Expect(2) = 2e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1 / -2
Query: 238 VSMEPAAAEAKGTWAVLQRTWCS 306
VSM A GT LQR WCS
Sbjct: 639 VSMLMAVVGVLGTLEELQRRWCS 571
>gb|BG048182.1|BG048182 OV1_28_F10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 683
Score = 165 bits (354), Expect(2) = 5e-044
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGP
Sbjct: 15 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGP 194
Query: 433 DRHDGFKDARRNYNYTE 383
DRHDG+KD R NYNY+E
Sbjct: 195 DRHDGYKDVRTNYNYSE 245
Score = 110 bits (234), Expect(2) = 2e-025
Identities = 55/94 (58%), Positives = 61/94 (64%)
Frame = +3 / -2
Query: 333 DKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQ 512
D +AAT+PA A V S *L*F+R SL PS SGPAT+AP +LGF F SLH PPL
Sbjct: 295 DIEISAATKPAFAARVGSE*L*FVRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLH 116
Query: 513 P**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
P TP GI+AP * G FP PTT*LIF GF
Sbjct: 115 PYLTPL*GIDAPL**GRFGYLFPKPTT*LIFNGF 14
Score = 34.1 bits (68), Expect(2) = 5e-044
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 329 EHHLLCNSSNVPNTPTTAISMETI 400
Score = 26.3 bits (51), Expect(2) = 2e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1 / -3
Query: 238 VSMEPAAAEAKGTWAVLQRTWCS 306
VSM A GT LQR WCS
Sbjct: 396 VSMLMAVVGVLGTLEELQRRWCS 328
>gb|AW745132.1|AW745132 LG1_386_A11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 617
Score = 165 bits (354), Expect(2) = 5e-044
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGP
Sbjct: 44 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGP 223
Query: 433 DRHDGFKDARRNYNYTE 383
DRHDG+KD R NYNY+E
Sbjct: 224 DRHDGYKDVRTNYNYSE 274
Score = 110 bits (234), Expect(2) = 2e-025
Identities = 55/94 (58%), Positives = 61/94 (64%)
Frame = +3 / -3
Query: 333 DKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQ 512
D +AAT+PA A V S *L*F+R SL PS SGPAT+AP +LGF F SLH PPL
Sbjct: 324 DIEISAATKPAFAARVGSE*L*FVRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLH 145
Query: 513 P**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
P TP GI+AP * G FP PTT*LIF GF
Sbjct: 144 PYLTPL*GIDAPL**GRFGYLFPKPTT*LIFNGF 43
Score = 34.1 bits (68), Expect(2) = 5e-044
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 358 EHHLLCNSSNVPNTPTTAISMETI 429
Score = 26.3 bits (51), Expect(2) = 2e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1 / -1
Query: 238 VSMEPAAAEAKGTWAVLQRTWCS 306
VSM A GT LQR WCS
Sbjct: 425 VSMLMAVVGVLGTLEELQRRWCS 357
>gb|AW746192.1|AW746192 WS1_40_A04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 165 bits (354), Expect(2) = 5e-044
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGP
Sbjct: 157 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGP 336
Query: 433 DRHDGFKDARRNYNYTE 383
DRHDG+KD R NYNY+E
Sbjct: 337 DRHDGYKDVRTNYNYSE 387
Score = 110 bits (234), Expect(2) = 2e-025
Identities = 55/94 (58%), Positives = 61/94 (64%)
Frame = +3 / -1
Query: 333 DKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQ 512
D +AAT+PA A V S *L*F+R SL PS SGPAT+AP +LGF F SLH PPL
Sbjct: 437 DIEISAATKPAFAARVGSE*L*FVRTSL*PSCLSGPATIAPTRILGFAFFVSLHL*PPLH 258
Query: 513 P**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
P TP GI+AP * G FP PTT*LIF GF
Sbjct: 257 PYLTPL*GIDAPL**GRFGYLFPKPTT*LIFNGF 156
Score = 34.1 bits (68), Expect(2) = 5e-044
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 471 EHHLLCNSSNVPNTPTTAISMETI 542
Score = 26.3 bits (51), Expect(2) = 2e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1 / -2
Query: 238 VSMEPAAAEAKGTWAVLQRTWCS 306
VSM A GT LQR WCS
Sbjct: 538 VSMLMAVVGVLGTLEELQRRWCS 470
>gb|CD220430.1|CD220430 CCC1_67_H06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_H06_A007 3', mRNA sequence
Length = 635
Score = 148 bits (317), Expect(2) = 2e-040
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 42 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 221
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R+ + E
Sbjct: 222 DRNDGFKDSRKTFGQNE 272
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 337 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 158
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 157 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 44
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 444 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 328
Score = 39.1 bits (79), Expect(2) = 2e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 335 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 445
>gb|CW164356.1|CW164356 104_572_11151945_148_36462_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151945, DNA
sequence
Length = 735
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / -1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 582 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 403
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 402 DRNDGFKDSRNTFGQNE 352
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / +2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 287 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 466
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 467 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 580
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / +3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 180 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 296
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / -3
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 289 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 179
>gb|CX617846.1|CX617846 GABR1_36_D11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_36_D11_A002 3', mRNA sequence
Length = 720
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 117 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 296
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 297 DRNDGFKDSRNTFGQNE 347
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -3
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 412 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 233
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 232 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 119
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -1
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 519 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 403
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 410 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 520
>gb|CX619537.1|CX619537 GABR1_46_D02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_46_D02_A002 3', mRNA sequence
Length = 708
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 106 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 285
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 286 DRNDGFKDSRNTFGQNE 336
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 401 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 222
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 221 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 108
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 508 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 392
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +3
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 399 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 509
>gb|CW022238.1|CW022238 104_161_10431724_1_30006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431724, DNA
sequence
Length = 702
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 53 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 232
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 233 DRNDGFKDSRNTFGQNE 283
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -1
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 348 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 169
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 168 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 55
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -2
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 455 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 339
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +1
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 346 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 456
>gb|CW236952.1|CW236952 104_693_11215895_148_37519_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215895, DNA
sequence
Length = 667
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 50 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 229
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 230 DRNDGFKDSRNTFGQNE 280
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 345 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 166
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 165 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 52
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 452 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 336
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +1
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 343 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 453
>gb|BE357367.1|BE357367 DG1_148_A07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 82 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 261
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 262 DRNDGFKDSRNTFGQNE 312
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -1
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 377 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 198
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 197 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 84
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -2
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 484 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 368
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +3
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 375 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 485
>gb|CX616301.1|CX616301 GABR1_27_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_D03_A002 3', mRNA sequence
Length = 605
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 3 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 182
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 183 DRNDGFKDSRNTFGQNE 233
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 298 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 119
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 118 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 5
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 405 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 289
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 296 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 406
>gb|CW388822.1|CW388822 fsbb001f073l23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073l23, DNA
sequence
Length = 581
Score = 147 bits (315), Expect(2) = 3e-040
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 85 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 264
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 265 DRNDGFKDSRNTFGQNE 315
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -1
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 380 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 201
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 200 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 87
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -2
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 487 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 371
Score = 39.1 bits (79), Expect(2) = 3e-040
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +3
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 378 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 488
>gb|CW212993.1|CW212993 104_644_11191313_148_37027_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191313, DNA
sequence
Length = 718
Score = 103 bits (219), Expect(4) = 5e-040
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +3 / +2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAM 461
PWPSPDKATNAATRPALP SVASV*L*FLRASL SWRSGPATMAP M
Sbjct: 575 PWPSPDKATNAATRPALPTSVASV*L*FLRASLKLSWRSGPATMAPTM 718
Score = 79.0 bits (166), Expect(3) = 2e-031
Identities = 35/50 (70%), Positives = 36/50 (72%)
Frame = -2 / -1
Query: 461 HSRCHGCWXXXXXRVQRCPQELQLH*SNAGGQRWSSRRIGSFVG*RPRRG 312
HSR HGCW + QRCPQEL LH*SN G Q WSSR IGSFV *RPR G
Sbjct: 718 HSRGHGCWP*SP*QFQRCPQEL*LH*SNTGRQCWSSRSIGSFVW*RPRGG 569
Score = 70.3 bits (147), Expect(3) = 3e-021
Identities = 32/44 (72%), Positives = 32/44 (72%)
Frame = -1 / -3
Query: 450 PWLLAPTAMTGSKMPAGTTTTLKQRWRATLV*SPHW*LCRVTAT 319
PWLLA AMT SKMPA TTLKQ W A LV*S HW*LC V AT
Sbjct: 707 PWLLALIAMTVSKMPARIITTLKQHW*AMLV*SQHW*LCLVKAT 576
Score = 59.3 bits (123), Expect(3) = 2e-031
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 317 RGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
RGGQE +VLCSTAHVPF SAA G MET+ A G
Sbjct: 577 RGGQECYVLCSTAHVPFPSAATGPMETIMAVG 482
Score = 58.8 bits (122), Expect(4) = 5e-040
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPR 318
P A+ VSM P AAE KGTWAVLQRT SCPPR
Sbjct: 483 PTAIMVSMGPVAAEGKGTWAVLQRT*HSCPPR 578
Score = 46.0 bits (94), Expect(3) = 3e-021
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 315 GWTRTPCSLQYRPCSXXXXXXXLHGNRDG 229
GWTR CSLQYRPCS HGN +G
Sbjct: 575 GWTRMLCSLQYRPCSLPLRRHRPHGNHNG 489
Score = 37.3 bits (75), Expect(4) = 5e-040
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 88 KKDRSYILLDLHDCDGSSTAR 150
+KDR YIL +LHD DG+S AR
Sbjct: 378 RKDRGYILSELHDSDGTSKAR 440
Score = 36.3 bits (73), Expect(3) = 2e-031
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3 / -2
Query: 181 FIYLDLD*CSLSPYCYHHNHGDLTVCSSGLFFHCFYILPC 62
F+Y LSPY YHH G LT CS LF + C
Sbjct: 471 FVYCVFRLVLLSPY*YHHYRGVLTRCSLDLFLFLSLLYIC 352
Score = 24.0 bits (46), Expect(3) = 3e-021
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 205 VSDSFVYCFIYLDL 164
VSDSFVYC L L
Sbjct: 483 VSDSFVYCVFRLVL 442
Score = 22.1 bits (42), Expect(4) = 5e-040
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 183 QYTKESDT 206
QYTKESDT
Sbjct: 461 QYTKESDT 484
>gb|CX613114.1|CX613114 GABR1_6_G11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_G11_A002 3', mRNA sequence
Length = 683
Score = 147 bits (315), Expect(2) = 1e-039
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GP
Sbjct: 101 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGP 280
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 281 DRNDGFKDSRNTFGQNE 331
Score = 109 bits (232), Expect(2) = 3e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -3
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 396 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 217
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 216 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 103
Score = 43.7 bits (89), Expect(2) = 3e-030
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1 / -1
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A ++TWCSC R R P +
Sbjct: 503 PVALTASMTTAAAARQGTLAARRKTWCSCRRR*CRLPCR 387
Score = 37.3 bits (75), Expect(2) = 1e-039
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / +1
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHV A+VP +AAA ME V+A G
Sbjct: 394 GSRHYRRRQEHHVFRRAANVPCRAAAAVVMEAVSATG 504
>gb|CF071078.1|CF071078 FE1_15_D12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_D12_A002 3', mRNA sequence
Length = 707
Score = 144 bits (309), Expect(2) = 2e-039
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = -3 / +3
Query: 610 PLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPD 431
P KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GPD
Sbjct: 108 PRKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPD 287
Query: 430 RHDGFKDARRNYNYTE 383
R+DGFKD+R + E
Sbjct: 288 RNDGFKDSRNTFGQNE 335
Score = 109 bits (232), Expect(2) = 1e-030
Identities = 54/98 (55%), Positives = 59/98 (60%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 400 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 221
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 220 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 107
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 507 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 391
Score = 39.1 bits (79), Expect(2) = 2e-039
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 398 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 508
>gb|CD205740.1|CD205740 HS1_18_E08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_18_E08_A012 3', mRNA sequence
Length = 601
Score = 144 bits (309), Expect(2) = 2e-039
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = -3 / +1
Query: 610 PLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPD 431
P KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+KK +PN + GAMV GPD
Sbjct: 1 PKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLTGAMVGGPD 180
Query: 430 RHDGFKDARRNYNYTE 383
R+DGFKD+R + E
Sbjct: 181 RNDGFKDSRNTFGQNE 228
Score = 107 bits (228), Expect(2) = 4e-030
Identities = 53/96 (55%), Positives = 58/96 (60%)
Frame = +3 / -3
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG FL S H
Sbjct: 293 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSAFLESRHL 114
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIF 605
PP+ TP G++APRW C G P PTT*LIF
Sbjct: 113 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIF 6
Score = 45.1 bits (92), Expect(2) = 4e-030
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1 / -1
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A +RTWCSC R R P +
Sbjct: 400 PVALTASMTTAAAARQGTLAARRRTWCSCRRR*CRLPCR 284
Score = 39.1 bits (79), Expect(2) = 2e-039
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +3
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHVL A+VP +AAA ME V+A G
Sbjct: 291 GSRHYRRRQEHHVLRRAANVPCRAAAAVVMEAVSATG 401
>gb|CX611325.1|CX611325 ANR1_24_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_B05_A002 3', mRNA sequence
Length = 705
Score = 145 bits (312), Expect(2) = 3e-039
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFGK+YPRH+HHRGAS P NGV Y C GG+KWRD+K+ +PN + GAMV GP
Sbjct: 103 NPKKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKRADPNLLTGAMVGGP 282
Query: 433 DRHDGFKDARRNYNYTE 383
DR+DGFKD+R + E
Sbjct: 283 DRNDGFKDSRNTFGQNE 333
Score = 106 bits (226), Expect(2) = 2e-029
Identities = 53/98 (54%), Positives = 58/98 (59%)
Frame = +3 / -2
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P +AT AATRPALP SV S LR SL PS+ SGP TMAP LG L S H
Sbjct: 398 PLPLLVRATRAATRPALPTSVGSFCPKVLRESLKPSFLSGPPTMAPVSRLGSALLESRHL 219
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
PP+ TP G++APRW C G P PTT*LIF G
Sbjct: 218 *PPVHEYLTPL*GVDAPRWCRCRGYFLPKPTT*LIFLG 105
Score = 43.7 bits (89), Expect(2) = 2e-029
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 223 PQAVTVSMEPAAAEAKGTWAVLQRTWCSCPPRRGRHPTK 339
P A+T SM AAA +GT A ++TWCSC R R P +
Sbjct: 505 PVALTASMTTAAAARQGTLAARRKTWCSCRRR*CRLPCR 389
Score = 37.3 bits (75), Expect(2) = 3e-039
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / +3
Query: 332 G*RPRRGGQEHHVLCSTAHVPFASAAAGSMETVTACG 222
G R R QEHHV A+VP +AAA ME V+A G
Sbjct: 396 GSRHYRRRQEHHVFRRAANVPCRAAAAVVMEAVSATG 506
>gb|BG054019.1|BG054019 OV2_1_C08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 424
Score = 138 bits (297), Expect(2) = 3e-036
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = -3 / +3
Query: 583 FGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDAR 404
FG +YP+ HHRGASIP +GV YGCKGG+KWRD KK NPN + GAMVAGPDRHDG+KD R
Sbjct: 3 FGNKYPKRPHHRGASIPHSGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVR 182
Query: 403 RNYNYTE 383
NYNY+E
Sbjct: 183 TNYNYSE 203
Score = 34.1 bits (68), Expect(2) = 3e-036
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 287 EHHLLCNSSNVPNTPTTAISMETI 358
>gb|CL175876.1|CL175876 104_381_10892754_148_31764_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892754, DNA
sequence
Length = 732
Score = 135 bits (290), Expect(2) = 3e-035
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3 / -3
Query: 574 RYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNY 395
+YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGPDRHDG+KD R NY
Sbjct: 727 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNY 548
Query: 394 NYTE 383
NY+E
Sbjct: 547 NYSE 536
Score = 34.1 bits (68), Expect(2) = 3e-035
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 452 EHHLLCNSSNVPNTPTTAISMETI 381
>gb|BF481319.1|BF481319 FM1_18_E02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 636
Score = 135 bits (290), Expect(2) = 3e-035
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3 / +1
Query: 574 RYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNY 395
+YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGPDRHDG+KD R NY
Sbjct: 1 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNY 180
Query: 394 NYTE 383
NY+E
Sbjct: 181 NYSE 192
Score = 34.1 bits (68), Expect(2) = 3e-035
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 276 EHHLLCNSSNVPNTPTTAISMETI 347
>gb|BG101880.1|BG101880 RHIZ2_23_E10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 637
Score = 135 bits (290), Expect(2) = 3e-035
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3 / +3
Query: 574 RYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNY 395
+YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGPDRHDG+KD R NY
Sbjct: 3 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNY 182
Query: 394 NYTE 383
NY+E
Sbjct: 183 NYSE 194
Score = 34.1 bits (68), Expect(2) = 3e-035
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 278 EHHLLCNSSNVPNTPTTAISMETI 349
>gb|CF071090.1|CF071090 FE1_15_F06.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_F06_A002 3', mRNA sequence
Length = 674
Score = 141 bits (302), Expect(2) = 2e-034
Identities = 50/67 (74%), Positives = 56/67 (83%)
Frame = -3 / +1
Query: 583 FGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDAR 404
FG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGPDRHDG+KD R
Sbjct: 1 FGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVR 180
Query: 403 RNYNYTE 383
NYNY+E
Sbjct: 181 TNYNYSE 201
Score = 25.8 bits (50), Expect(2) = 2e-034
Identities = 7/12 (58%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 305 EHHVLCSTAHVP 270
EHH+LC++++VP
Sbjct: 285 EHHLLCNSSNVP 320
>gb|BG948189.1|BG948189 IP1_10_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 654
Score = 128 bits (274), Expect(2) = 4e-033
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = -3 / +2
Query: 556 HHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGPDRHDG+KD R NYNY+E
Sbjct: 2 HHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNYNYSE 175
Score = 34.1 bits (68), Expect(2) = 4e-033
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 259 EHHLLCNSSNVPNTPTTAISMETI 330
>gb|CW216644.1|CW216644 104_649_11195227_116_37125_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195227, DNA
sequence
Length = 666
Score = 136 bits (292), Expect = 3e-031
Identities = 51/77 (66%), Positives = 59/77 (76%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGAS P + V Y C GG+KWRD+KK +PN I GAMV GP
Sbjct: 397 NPRKMSYVVGFGNKYPRHVHHRGASTPHSRVKYSCTGGYKWRDSKKADPNVITGAMVGGP 576
Query: 433 DRHDGFKDARRNYNYTE 383
DR+D F D+R + TE
Sbjct: 577 DRNDRFNDSRMAFGQTE 627
Score = 105 bits (224), Expect = 6e-022
Identities = 49/89 (55%), Positives = 57/89 (64%)
Frame = +3 / -2
Query: 345 NAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQP**T 524
+AATRPALP SV SV +R SLN S RSGP T+AP + G FL S H +PP+ T
Sbjct: 665 SAATRPALPTSVGSVCPKAMRESLNLSLRSGPPTIAPVITFGSAFLLSRHLYPPVHEYLT 486
Query: 525 PFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
G++APRW TC G P PTT*LIF G
Sbjct: 485 RLCGVDAPRWCTCRGYLLPKPTT*LIFLG 399
>gb|CW451021.1|CW451021 fsbb001f189o18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f189o18, DNA
sequence
Length = 604
Score = 136 bits (292), Expect = 3e-031
Identities = 51/77 (66%), Positives = 59/77 (76%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGAS P + V Y C GG+KWRD+KK +PN I GAMV GP
Sbjct: 300 NPRKMSYVVGFGNKYPRHVHHRGASTPHSRVKYSCTGGYKWRDSKKADPNVITGAMVGGP 479
Query: 433 DRHDGFKDARRNYNYTE 383
DR+D F D+R + TE
Sbjct: 480 DRNDRFNDSRMAFGQTE 530
Score = 110 bits (235), Expect = 2e-023
Identities = 53/98 (54%), Positives = 61/98 (62%)
Frame = +3 / -1
Query: 318 PWPSPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHF 497
P P AT+AATRPALP SV SV +R SLN S RSGP T+AP + G FL S H
Sbjct: 595 PRPLLVTATSAATRPALPTSVGSVCPKAMRESLNLSLRSGPPTIAPVITFGSAFLLSRHL 416
Query: 498 HPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKG 611
+PP+ T G++APRW TC G P PTT*LIF G
Sbjct: 415 YPPVHEYLTRLCGVDAPRWCTCRGYLLPKPTT*LIFLG 302
>gb|DR831463.2|DR831463 MM79 Sorghum bicolor greenbug-responsive cDNA library Sorghum
bicolor cDNA 5', mRNA sequence
Length = 304
Score = 128 bits (275), Expect(2) = 7e-031
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = -3 / +3
Query: 568 PRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNY 389
P+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMVAGPDR+DG+KD R NYNY
Sbjct: 3 PKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRYDGYKDVRTNYNY 182
Query: 388 TE 383
+E
Sbjct: 183 SE 188
Score = 25.4 bits (49), Expect(2) = 7e-031
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -3 / +3
Query: 316 GVDKNTMFSAV 284
G+DKNT+FSA+
Sbjct: 261 GIDKNTIFSAI 293
>gb|BF481389.1|BF481389 FM1_18_E02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 532
Score = 120 bits (256), Expect = 2e-026
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMV 443
NPLKMSYVVGFG +YP+ HHRGASIP NGV YGCKGG+KWRD KK NPN + GAMV
Sbjct: 361 NPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMV 531
>gb|BG241569.1|BG241569 RHIZ2_17_B11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 568
Score = 100 bits (214), Expect(2) = 6e-025
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -3 / +1
Query: 526 GVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
GV YGCKGG+KWRD KK N N + GAMVAGPDRHDG+KD R NYNY+E
Sbjct: 1 GVKYGCKGGYKWRDTKKANXNILVGAMVAGPDRHDGYKDVRTNYNYSE 144
Score = 34.1 bits (68), Expect(2) = 6e-025
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 305 EHHVLCSTAHVPFASAAAGSMETV 234
EHH+LC++++VP A SMET+
Sbjct: 228 EHHLLCNSSNVPNTPTTAISMETI 299
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 853,909,391
Number of Sequences: 832831
Number of extensions: 14868365
Number of successful extensions: 182526
Number of sequences better than 1.0e-020: 39
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 18066623463
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)