TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230315.2.1
(457 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (L... 247 1e-064
gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorgh... 246 1e-064
gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedl... 246 1e-064
gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed see... 246 1e-064
gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated... 246 1e-064
gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkal... 246 1e-064
gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots ... 246 1e-064
gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/ce... 245 3e-064
gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed see... 231 5e-060
gb|CW216948.1|CW216948 104_650_11195395_148_37130_080 Sorgh... 191 7e-048
gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorgh... 175 3e-043
gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorgh... 175 4e-043
gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation... 175 4e-043
gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation... 175 4e-043
gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorgh... 168 4e-041
gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation... 168 4e-041
gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1... 168 4e-041
gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation... 166 1e-040
gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorgh... 160 1e-038
gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots ... 160 1e-038
gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorgh... 149 2e-035
gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots S... 149 2e-035
gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stres... 144 8e-034
gb|CD236278.1|CD236278 SS1_33_D08.b1_A012 Salt-stressed see... 143 2e-033
gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedl... 141 7e-033
gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorgh... 140 1e-032
gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorgh... 119 3e-031
gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum b... 119 3e-031
gb|CW484442.1|CW484442 fsbb001f246j11k0 Sorghum methylation... 135 4e-031
gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorgh... 134 6e-031
gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorgh... 134 6e-031
gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Mer... 134 6e-031
gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sor... 134 6e-031
gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sor... 134 6e-031
gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sor... 134 6e-031
gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sor... 134 6e-031
gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sor... 134 6e-031
gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorgh... 133 1e-030
gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation... 99 1e-029
gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorgh... 99 1e-029
gb|CW160145.1|CW160145 104_566_11149729_116_36421_005 Sorgh... 130 1e-029
gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sor... 130 1e-029
gb|CW405176.1|CW405176 fsbb001f097k01k0 Sorghum methylation... 90 8e-029
gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation... 125 5e-028
gb|BG356421.1|BG356421 EM1_22_D02.g1_A002 Embryo 1 (EM1) So... 107 1e-027
gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation... 118 4e-026
gb|CW033818.1|CW033818 104_263_10502173_115_30360 Sorghum m... 99 5e-026
gb|BF421136.1|BF421136 FM1_6_H03.g1_A003 Floral-Induced Mer... 115 4e-025
gb|CW281479.1|CW281479 104_757_11408201_148_35459_077 Sorgh... 114 7e-025
gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sor... 113 2e-024
gb|CW039718.1|CW039718 104_272_10505656_114_30389 Sorghum m... 62 2e-024
gb|CW474162.1|CW474162 fsbb001f229n21k0 Sorghum methylation... 112 3e-024
gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sor... 108 6e-023
gb|CW200385.1|CW200385 104_625_11184038_148_36863_049 Sorgh... 56 5e-022
gb|CW200384.1|CW200384 104_625_11184038_116_36864_049 Sorgh... 56 5e-022
gb|CW230595.1|CW230595 104_679_11210649_148_37483_039 Sorgh... 56 5e-022
gb|CW350958.1|CW350958 fsbb001f012i07k0 Sorghum methylation... 104 1e-021
gb|BG355811.1|BG355811 EM1_17_A06.g1_A002 Embryo 1 (EM1) So... 104 1e-021
gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorgh... 102 4e-021
gb|CW084629.1|CW084629 104_427_10945909_116_32511_055 Sorgh... 101 5e-021
>gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 490
Score = 247 bits (533), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / +1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 136 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 315
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 316 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLXGVHVR 477
Score = 225 bits (486), Expect = 3e-058
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -3
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 449 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 270
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 269 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 135
Score = 129 bits (277), Expect = 2e-029
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / -2
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 447 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 268
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 267 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 133
>gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 626
Score = 246 bits (532), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / -2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 364 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 185
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 184 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 23
Score = 225 bits (486), Expect = 3e-058
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / +3
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 51 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 230
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 231 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 365
Score = 129 bits (277), Expect = 2e-029
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / +2
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 53 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 232
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 233 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 367
>gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_1_D09_A012 3', mRNA sequence
Length = 654
Score = 246 bits (532), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / +2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 164 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 343
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 344 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 505
Score = 225 bits (486), Expect(2) = 8e-060
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -1
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 477 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 298
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 297 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 163
Score = 129 bits (277), Expect = 2e-029
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / -3
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 475 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 296
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 295 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 161
Score = 25.8 bits (50), Expect(2) = 8e-060
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 85 ANLVYCHPLP 114
ANL+YCH LP
Sbjct: 532 ANLIYCHHLP 503
>gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_11_H04_A012 3', mRNA sequence
Length = 635
Score = 246 bits (532), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / +1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 145 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 324
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 325 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 486
Score = 225 bits (486), Expect(2) = 6e-060
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -1
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 458 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 279
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 278 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 144
Score = 129 bits (277), Expect = 2e-029
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / -3
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 456 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 277
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 276 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 142
Score = 26.3 bits (51), Expect(2) = 6e-060
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 516 SANLIYCHHLP 484
>gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_A08_A002 3', mRNA sequence
Length = 567
Score = 246 bits (532), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / +3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 48 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 227
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 228 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 389
Score = 225 bits (486), Expect(2) = 6e-060
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -3
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 361 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 182
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 181 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 47
Score = 129 bits (277), Expect = 2e-029
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / -2
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 359 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 180
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 179 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 45
Score = 26.3 bits (51), Expect(2) = 6e-060
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 419 SANLIYCHHLP 387
>gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_D02_A002 3', mRNA sequence
Length = 689
Score = 246 bits (532), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / +3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 162 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 341
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 342 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 503
Score = 225 bits (486), Expect(2) = 6e-060
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -2
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 475 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 296
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 295 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 161
Score = 129 bits (277), Expect(2) = 1e-030
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / -1
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 473 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 294
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 293 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 159
Score = 26.3 bits (51), Expect(2) = 6e-060
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 533 SANLIYCHHLP 501
Score = 23.5 bits (45), Expect(2) = 1e-030
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 84 RQFGLLSSLAVKPLV 128
RQF LL SLAV+ L+
Sbjct: 531 RQFNLLPSLAVRELL 487
>gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H09_A002 3', mRNA sequence
Length = 647
Score = 246 bits (532), Expect = 1e-064
Identities = 99/114 (86%), Positives = 105/114 (92%)
Frame = -1 / +2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 149 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 328
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 329 KWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 490
Score = 225 bits (486), Expect(2) = 6e-060
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -3
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 462 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 283
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 282 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 148
Score = 130 bits (278), Expect = 1e-029
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +2 / -2
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLPLDP G +GAGP
Sbjct: 460 AVRSQAGGEGDGRAGEPDVPVDEGADSERAGLGRAGDDTVPLPLDPAGGSGAGPRVHVLA 281
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 280 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 146
Score = 26.3 bits (51), Expect(2) = 6e-060
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 520 SANLIYCHHLP 488
>gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_B10_A007 3', mRNA sequence
Length = 639
Score = 245 bits (529), Expect = 3e-064
Identities = 98/114 (85%), Positives = 105/114 (92%)
Frame = -1 / +2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV+LQSELDSL+ PAGWLEW+G+FALDTLYYGEYMNTGPGAGTSGRV
Sbjct: 149 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 328
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
+WKGYRVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 329 RWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 490
Score = 225 bits (486), Expect(2) = 6e-060
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +3 / -1
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 462 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 283
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P**SVSSAKLP HSSQPAG+ SESSSDCR TVREYCFHGRPR*VL
Sbjct: 282 P**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VL 148
Score = 126 bits (270), Expect = 2e-028
Identities = 58/105 (55%), Positives = 63/105 (60%)
Frame = +2 / -3
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGPXXXXXX 316
A RSQAGGEGDGRAGEP+V VDE VPLP DP G +GAGP
Sbjct: 460 AVRSQAGGEGDGRAGEPDVPVDEGADGERAGLGRAGDDTVPLPPDPAGGSGAGPRVHVLA 281
Query: 317 XXXXXXXXXXXPLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEPA R D+RVQLRLQ +RAGVLLPW A+VGLG
Sbjct: 280 VVERVEREVAVPLEPARRGDERVQLRLQENRAGVLLPWPAEVGLG 146
Score = 26.3 bits (51), Expect(2) = 6e-060
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 520 SANLIYCHHLP 488
>gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_A05_A012 3', mRNA sequence
Length = 520
Score = 231 bits (499), Expect = 5e-060
Identities = 94/114 (82%), Positives = 101/114 (88%)
Frame = -1 / +3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV++Q ELDSL+ PAGWLEW+G+FALDTLY GEYMNTGPGAGTSGRV
Sbjct: 21 KTYLGRPWKQYSRTVFMQ*ELDSLIAPAGWLEWDGNFALDTLYSGEYMNTGPGAGTSGRV 200
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
KWKGYRVITSA EASAFTVG+FIDGD+WLAGTSIPFTT L*A GG G R
Sbjct: 201 KWKGYRVITSAPEASAFTVGSFIDGDVWLAGTSIPFTTVL*AHGGGVLGGVHVR 362
Score = 208 bits (449), Expect(2) = 7e-055
Identities = 90/105 (85%), Positives = 92/105 (87%)
Frame = +3 / -1
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHK VVKGMDVPASQ SPSMK PTV ALAS ALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 334 PPCAHKTVVKGMDVPASQTSPSMKEPTVNALASGALVMTRYPFHLTRPEVPAPGPVFMYS 155
Query: 315 P**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
P *SVSSAKLP HSS PAG+ SESSS C TVREYCFHGRPR*VL
Sbjct: 154 PE*SVSSAKLPSHSSHPAGAMSESSSYCMKTVREYCFHGRPR*VL 20
Score = 66.6 bits (139), Expect(2) = 4e-022
Identities = 30/54 (55%), Positives = 31/54 (57%)
Frame = +2 / -3
Query: 137 AARSQAGGEGDGRAGEPEVAVDEVXXXXXXXXXXXXXXXVPLPLDPPGRAGAGP 298
A RSQ GGEGDGRAG P V VDE VPLPLDP G +GAGP
Sbjct: 332 AVRSQDGGEGDGRAG*PNVPVDEGADGERAGLGRAGDDTVPLPLDPAGGSGAGP 171
Score = 58.3 bits (121), Expect(2) = 4e-022
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2 / -3
Query: 350 PLEPAGRVDQRVQLRLQVHRAGVLLPWAAQVGLG 451
PLEP+ R D+RVQL L +RAGVLLPW A+VGLG
Sbjct: 119 PLEPSRRGDERVQLLLHENRAGVLLPWPAEVGLG 18
Score = 26.3 bits (51), Expect(2) = 7e-055
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 392 SANLIYCHHLP 360
>gb|CW216948.1|CW216948 104_650_11195395_148_37130_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195395, DNA
sequence
Length = 693
Score = 191 bits (411), Expect = 7e-048
Identities = 79/94 (84%), Positives = 84/94 (89%)
Frame = -1 / -2
Query: 388 LDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVG 209
LDSL+ PAGWLE +G+FALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVG
Sbjct: 692 LDSLIAPAGWLE*DGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVG 513
Query: 208 NFIDGDLWLAGTSIPFTTGL*ARGGMYTRGFTAR 107
+FIDGD+WLAGTSIPFTTGL*A GG G R
Sbjct: 512 SFIDGDVWLAGTSIPFTTGL*AHGGGVLGGVHVR 411
Score = 178 bits (383), Expect(2) = 7e-046
Identities = 77/85 (90%), Positives = 79/85 (92%)
Frame = +3 / +1
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTRYPFHLTRP+VPAPGPVFMYS
Sbjct: 439 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYS 618
Query: 315 P**SVSSAKLPFHSSQPAGSTSESS 389
P**SVSSAKLP HSSQPAG+ SESS
Sbjct: 619 P**SVSSAKLPSHSSQPAGAMSESS 693
Score = 26.3 bits (51), Expect(2) = 7e-046
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 381 SANLIYCHHLP 413
>gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232263, DNA
sequence
Length = 623
Score = 175 bits (377), Expect = 3e-043
Identities = 65/98 (66%), Positives = 80/98 (81%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK YSRTV++Q+++++LV P GWLEWNG+FALDTLYY EYMN GPGA TS RV
Sbjct: 378 SYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPGADTSARVA 199
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
W GY V+T+A +A+ FTV +FI GDLWL TS P+T G
Sbjct: 198 WSGYHVLTNATDAANFTVLDFIQGDLWLNSTSFPYTLG 85
Score = 125 bits (268), Expect = 3e-028
Identities = 63/98 (64%), Positives = 65/98 (66%)
Frame = +3 / +2
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
KP V G DV SQRSP MK TVK AS ALV T YP H T +V APGP FMYS * SV
Sbjct: 83 KPNV*GKDVELSQRSPWMKSSTVKLAASVALVSTWYPDHATLAEVSAPGPRFMYSA*YSV 262
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR* 443
SSAK+PFHSS P G TS S C TVRE FHG PR*
Sbjct: 263 SSAKVPFHSSHPRGWTSASILVCTNTVRE*SFHGLPR* 376
>gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105136, DNA
sequence
Length = 396
Score = 175 bits (376), Expect = 4e-043
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = -1 / +1
Query: 442 YLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKW 263
YLGRPWK YSRTV++Q+++++LV P GWLEWNG+FALDTLYY EYMN GPGA TS RV W
Sbjct: 1 YLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPGADTSARVAW 180
Query: 262 KGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
GY V+T+A +A+ FTV +FI GDLWL TS P+T G
Sbjct: 181 SGYHVLTNATDAANFTVLDFIQGDLWLNSTSFPYTLG 291
Score = 125 bits (267), Expect = 5e-028
Identities = 62/97 (63%), Positives = 64/97 (65%)
Frame = +3 / -2
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
KP V G DV SQRSP MK TVK AS ALV T YP H T +V APGP FMYS * SV
Sbjct: 293 KPNV*GKDVELSQRSPWMKSSTVKLAASVALVSTWYPDHATLAEVSAPGPRFMYSA*YSV 114
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR 440
SSAK+PFHSS P G TS S C TVRE FHG PR
Sbjct: 113 SSAKVPFHSSHPRGWTSASILVCTNTVRE*SFHGLPR 3
>gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f010h01, DNA
sequence
Length = 640
Score = 175 bits (376), Expect = 4e-043
Identities = 65/102 (63%), Positives = 79/102 (77%)
Frame = -1 / +1
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +TYLGRPWKQYSR V++QS + LV P GWL W+G FALDTLYYGEY NTGPGAG +
Sbjct: 34 QTQTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAA 213
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW G+ V+TSAAEA FTV FI+G++WL T + +T GL
Sbjct: 214 RVKWPGFHVMTSAAEAGNFTVAQFIEGNMWLPPTGVKYTAGL 339
Score = 123 bits (263), Expect = 2e-027
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = +3 / -3
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P V V + PSM TVK ASAALVMT P HLT PAPGPV +YSP**SV
Sbjct: 338 RPAVYLTPVGGNHMLPSMNCATVKLPASAALVMTWNPGHLTLAATPAPGPVLLYSP**SV 159
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR 440
SSAK P H+S P+G T DC T REYCFHGRPR
Sbjct: 158 SSAKSPSHASHPSGRTRSPM*DCMNTTREYCFHGRPR 48
>gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160k16, DNA
sequence
Length = 538
Score = 175 bits (376), Expect = 4e-043
Identities = 65/102 (63%), Positives = 79/102 (77%)
Frame = -1 / -1
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +TYLGRPWKQYSR V++QS + LV P GWL W+G FALDTLYYGEY NTGPGAG +
Sbjct: 337 QTQTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAA 158
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW G+ V+TSAAEA FTV FI+G++WL T + +T GL
Sbjct: 157 RVKWPGFHVMTSAAEAGNFTVAQFIEGNMWLPPTGVKYTAGL 32
Score = 123 bits (263), Expect = 2e-027
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = +3 / +3
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P V V + PSM TVK ASAALVMT P HLT PAPGPV +YSP**SV
Sbjct: 33 RPAVYLTPVGGNHMLPSMNCATVKLPASAALVMTWNPGHLTLAATPAPGPVLLYSP**SV 212
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR 440
SSAK P H+S P+G T DC T REYCFHGRPR
Sbjct: 213 SSAKSPSHASHPSGRTRSPM*DCMNTTREYCFHGRPR 323
>gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197697, DNA
sequence
Length = 667
Score = 168 bits (362), Expect = 4e-041
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = -1 / -2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
TYLGRPWK YSRTV +QSE+D+LVDPAGW+ W+G +AL TL+Y EY N+GPGA TS RV
Sbjct: 474 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 295
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G+ V+ A+A+ FTVGN + GD WL T +PFT+GL
Sbjct: 294 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGL 178
Score = 112 bits (239), Expect = 3e-024
Identities = 57/99 (57%), Positives = 62/99 (62%)
Frame = +3 / +2
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P+V G V SQ+SPS LPTVK ASA T P H T V APGP +YS * SV
Sbjct: 179 RPLVNGTPVWGSQKSPSTMLPTVKLAASAVPFSTWKPGHATLLLVSAPGPELLYSA*KSV 358
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SA P H PAGSTS S+SDC TVRE FHGRPR*V
Sbjct: 359 LSA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR*V 475
>gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 732
Score = 168 bits (362), Expect = 4e-041
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
TYLGRPWK YSRTV +QSE+D+LVDPAGW+ W+G +AL TL+Y EY N+GPGA TS RV
Sbjct: 688 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 509
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G+ V+ A+A+ FTVGN + GD WL T +PFT+GL
Sbjct: 508 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGL 392
Score = 112 bits (239), Expect = 3e-024
Identities = 57/99 (57%), Positives = 62/99 (62%)
Frame = +3 / +3
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P+V G V SQ+SPS LPTVK ASA T P H T V APGP +YS * SV
Sbjct: 393 RPLVNGTPVWGSQKSPSTMLPTVKLAASAVPFSTWKPGHATLLLVSAPGPELLYSA*KSV 572
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SA P H PAGSTS S+SDC TVRE FHGRPR*V
Sbjct: 573 LSA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR*V 689
>gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 168 bits (362), Expect = 4e-041
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = -1 / +3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
TYLGRPWK YSRTV +QSE+D+LVDPAGW+ W+G +AL TL+Y EY N+GPGA TS RV
Sbjct: 57 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 236
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G+ V+ A+A+ FTVGN + GD WL T +PFT+GL
Sbjct: 237 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGL 353
Score = 112 bits (239), Expect = 3e-024
Identities = 57/99 (57%), Positives = 62/99 (62%)
Frame = +3 / -1
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P+V G V SQ+SPS LPTVK ASA T P H T V APGP +YS * SV
Sbjct: 352 RPLVNGTPVWGSQKSPSTMLPTVKLAASAVPFSTWKPGHATLLLVSAPGPELLYSA*KSV 173
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SA P H PAGSTS S+SDC TVRE FHGRPR*V
Sbjct: 172 LSA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR*V 56
>gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 717
Score = 166 bits (358), Expect = 1e-040
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = -1 / +3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
TYLGRPWK YSRTV +QSE+D+LVDPAGW+ W+G +AL TL+Y EY N+GPGA TS RV
Sbjct: 357 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 536
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
W G+ V+ A+A+ FTVGN + GD WL T +PFT+G
Sbjct: 537 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSG 650
Score = 111 bits (237), Expect = 7e-024
Identities = 57/98 (58%), Positives = 61/98 (62%)
Frame = +3 / -3
Query: 153 PVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SVS 332
P+V G V SQ+SPS LPTVK ASA T P H T V APGP +YS * SV
Sbjct: 649 PLVNGTPVWGSQKSPSTMLPTVKLAASAVPFSTWKPGHATLLLVSAPGPELLYSA*KSVL 470
Query: 333 SAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SA P H PAGSTS S+SDC TVRE FHGRPR*V
Sbjct: 469 SA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR*V 356
>gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405768, DNA
sequence
Length = 617
Score = 160 bits (344), Expect = 1e-038
Identities = 63/100 (63%), Positives = 72/100 (72%)
Frame = -1 / -2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
T+LGRPWK YSRTV + S LD+ VD GWLEW+G FAL TL+YGEY N GPGA T+GRV
Sbjct: 391 TFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRVN 212
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
W GY VIT + A FTVG FI G WL GT +P+ GL*
Sbjct: 211 WPGYHVITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL* 92
Score = 106 bits (227), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = +3 / +3
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P + G VP SQ P M PTV A+ VMT P LTRP V APGP F YSP* SV
Sbjct: 96 RPSM*GTPVPLSQLPP*MNWPTVNCTATLLSVMTW*PGQLTRPAVAAPGPSFWYSP*KSV 275
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR 440
SAK P HSS P ST S D TVRE FHGRPR
Sbjct: 276 LSAKSPSHSSHPLASTCASRYDSMTTVRE*AFHGRPR 386
>gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A01_A002 3', mRNA sequence
Length = 599
Score = 160 bits (344), Expect = 1e-038
Identities = 63/100 (63%), Positives = 72/100 (72%)
Frame = -1 / +1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
T+LGRPWK YSRTV + S LD+ VD GWLEW+G FAL TL+YGEY N GPGA T+GRV
Sbjct: 178 TFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRVN 357
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
W GY VIT + A FTVG FI G WL GT +P+ GL*
Sbjct: 358 WPGYHVITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL* 477
Score = 106 bits (227), Expect = 2e-022
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = +3 / -1
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
+P + G VP SQ P M PTV A+ VMT P LTRP V APGP F YSP* SV
Sbjct: 473 RPSM*GTPVPLSQLPP*MNWPTVNCTATLLSVMTW*PGQLTRPAVAAPGPSFWYSP*KSV 294
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR 440
SAK P HSS P ST S D TVRE FHGRPR
Sbjct: 293 LSAKSPSHSSHPLASTCASRYDSMTTVRE*AFHGRPR 183
>gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156215, DNA
sequence
Length = 531
Score = 149 bits (320), Expect = 2e-035
Identities = 55/99 (55%), Positives = 72/99 (72%)
Frame = -1 / -2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK +SRTV ++S + LVDP+GW+ W+G FALDTLYY EY N+GPGA TS RV
Sbjct: 455 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVA 276
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G+ V+ +A FTV + + G+ WL T +PFT+GL
Sbjct: 275 WPGFHVLGDITDAGNFTVTSMVLGENWLPQTGVPFTSGL 159
Score = 107 bits (228), Expect = 1e-022
Identities = 56/99 (56%), Positives = 61/99 (61%)
Frame = +3 / +1
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
KP+V G V SQ SPS L TVK AS T P H TR V APGP+ +YS **SV
Sbjct: 160 KPLVNGTPVCGSQFSPSTMLVTVKLPASVMSPSTWKPGHATRRLVSAPGPLLLYSA**SV 339
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SSAK P H QP GSTS + D TVRE FHGRPR*+
Sbjct: 340 SSAKSPDHGIQPEGSTSPPTYDSMTTVREKFFHGRPR*L 456
>gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_D12_A002 3', mRNA sequence
Length = 615
Score = 149 bits (320), Expect = 2e-035
Identities = 55/99 (55%), Positives = 72/99 (72%)
Frame = -1 / +1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK +SRTV ++S + LVDP+GW+ W+G FALDTLYY EY N+GPGA TS RV
Sbjct: 40 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVA 219
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G+ V+ +A FTV + + G+ WL T +PFT+GL
Sbjct: 220 WPGFHVLGDITDAGNFTVTSMVLGENWLPQTGVPFTSGL 336
Score = 107 bits (228), Expect = 1e-022
Identities = 56/99 (56%), Positives = 61/99 (61%)
Frame = +3 / -2
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
KP+V G V SQ SPS L TVK AS T P H TR V APGP+ +YS **SV
Sbjct: 335 KPLVNGTPVCGSQFSPSTMLVTVKLPASVMSPSTWKPGHATRRLVSAPGPLLLYSA**SV 156
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SSAK P H QP GSTS + D TVRE FHGRPR*+
Sbjct: 155 SSAKSPDHGIQPEGSTSPPTYDSMTTVREKFFHGRPR*L 39
>gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_H09_A002 3', mRNA sequence
Length = 491
Score = 144 bits (309), Expect = 8e-034
Identities = 54/99 (54%), Positives = 71/99 (71%)
Frame = -1 / +1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK +SRTV ++S + LVDP+GW+ W+G FALDTL Y EY N+GPGA TS RV
Sbjct: 142 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTL*YAEYNNSGPGADTSRRVA 321
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G+ V+ +A FTV + + G+ WL T +PFT+GL
Sbjct: 322 WPGFHVLGDITDAGNFTVTSMVLGENWLPQTGVPFTSGL 438
Score = 105 bits (223), Expect = 6e-022
Identities = 55/99 (55%), Positives = 60/99 (60%)
Frame = +3 / -1
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
KP+V G V SQ SPS L TVK AS T P H TR V APGP+ +YS *SV
Sbjct: 437 KPLVNGTPVCGSQFSPSTMLVTVKLPASVMSPSTWKPGHATRRLVSAPGPLLLYSAY*SV 258
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*V 446
SSAK P H QP GSTS + D TVRE FHGRPR*+
Sbjct: 257 SSAKSPDHGIQPEGSTSPPTYDSMTTVREKFFHGRPR*L 141
>gb|CD236278.1|CD236278 SS1_33_D08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_33_D08_A012 3', mRNA sequence
Length = 350
Score = 143 bits (306), Expect = 2e-033
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = -1 / +2
Query: 319 YGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*AR 140
YGEYMNTGPGAGTSGRVKWKG RVITSAAEASAFTVG+FIDGD+WLAGTSIPFTTGL*A
Sbjct: 2 YGEYMNTGPGAGTSGRVKWKGSRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL*AH 181
Query: 139 GGMYTRGFTAR 107
GG G R
Sbjct: 182 GGGVLGGVHVR 214
Score = 132 bits (283), Expect(2) = 2e-032
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +3 / -3
Query: 135 PPRAHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYS 314
PP AHKPVVKGMDVPASQ SPSMK PTV ALASAALVMTR PFHLTRP+VPAPGPVFMYS
Sbjct: 186 PPCAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRDPFHLTRPEVPAPGPVFMYS 7
Query: 315 P* 320
P*
Sbjct: 6 P* 1
Score = 26.3 bits (51), Expect(2) = 2e-032
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 82 AANLVYCHPLP 114
+ANL+YCH LP
Sbjct: 244 SANLIYCHHLP 212
>gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_G09_A012 3', mRNA sequence
Length = 565
Score = 141 bits (302), Expect = 7e-033
Identities = 52/95 (54%), Positives = 68/95 (71%)
Frame = -1 / +3
Query: 433 RPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGY 254
RPWK +SRTV ++S + LVDP+GW+ W+G FALDTLYY EY N+GPGA TS RV W G+
Sbjct: 3 RPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVAWPGF 182
Query: 253 RVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
V+ +A FTV + + G+ WL T +PFT+GL
Sbjct: 183 HVLGDITDAGNFTVTSMVLGENWLPQTGVPFTSGL 287
Score = 100 bits (214), Expect = 1e-020
Identities = 53/95 (55%), Positives = 57/95 (60%)
Frame = +3 / -1
Query: 150 KPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**SV 329
KP+V G V SQ SPS L TVK AS T P H TR V APGP+ +YS **SV
Sbjct: 286 KPLVNGTPVCGSQFSPSTMLVTVKLPASVMSPSTWKPGHATRRLVSAPGPLLLYSA**SV 107
Query: 330 SSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGR 434
SSAK P H QP GSTS + D TVRE FHGR
Sbjct: 106 SSAKSPDHGIQPEGSTSPPTYDSMTTVREKFFHGR 2
>gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407836, DNA
sequence
Length = 648
Score = 140 bits (301), Expect = 1e-032
Identities = 54/99 (54%), Positives = 67/99 (67%)
Frame = -1 / -3
Query: 442 YLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKW 263
YLGRPW++Y+R + + LD V PAGWL+W+G A TLYYGEY NTG GA T+GRV W
Sbjct: 427 YLGRPWRRYARVAVMATSLDGSVAPAGWLQWSGQPAPGTLYYGEYRNTGAGAATAGRVTW 248
Query: 262 KGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
G S +A+ FTV NFI GD WL T + +T+GL*
Sbjct: 247 TGVHTSMSTEDAAGFTVANFIMGDSWLDATGVKYTSGL* 131
>gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146378, DNA
sequence
Length = 728
Score = 119 bits (255), Expect(2) = 3e-031
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = -1 / -1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK+Y+RTV ++S + L+ P GW EW G L TLYY EY NTGPGAGTS RV
Sbjct: 416 SYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 237
Query: 265 WKGYRVITSA 236
W GYRVI A
Sbjct: 236 WPGYRVIGQA 207
Score = 35.9 bits (72), Expect(2) = 3e-031
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / -1
Query: 247 ITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
+ AEA+ FT G FIDG WL T P G
Sbjct: 221 VIGQAEATHFTAGVFIDGMTWLQSTGTPNVMG 126
>gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 3', mRNA sequence
Length = 713
Score = 119 bits (255), Expect(2) = 3e-031
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = -1 / +2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK+Y+RTV ++S + L+ P GW EW G L TLYY EY NTGPGAGTS RV
Sbjct: 152 SYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 331
Query: 265 WKGYRVITSA 236
W GYRVI A
Sbjct: 332 WPGYRVIGQA 361
Score = 35.9 bits (72), Expect(2) = 3e-031
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / +2
Query: 247 ITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
+ AEA+ FT G FIDG WL T P G
Sbjct: 347 VIGQAEATHFTAGVFIDGMTWLQSTGTPNVMG 442
>gb|CW484442.1|CW484442 fsbb001f246j11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f246j11, DNA
sequence
Length = 735
Score = 135 bits (289), Expect = 4e-031
Identities = 51/82 (62%), Positives = 61/82 (74%)
Frame = -1 / -3
Query: 394 SELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFT 215
S + LV P GWL W+G FALDTLYYGEY NTGPGAG + RVKW G+ V+TSAAEA FT
Sbjct: 733 SYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAARVKWPGFHVMTSAAEAGNFT 554
Query: 214 VGNFIDGDLWLAGTSIPFTTGL 149
V FI+G++WL T + +T GL
Sbjct: 553 VAQFIEGNMWLPPTGVKYTAGL 488
>gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / -2
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 408 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 229
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 228 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 103
>gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479103, DNA
sequence
Length = 666
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +1
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 193 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 372
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 373 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 498
>gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 564
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +2
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 137 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 316
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 317 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 442
>gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +3
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 258 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 437
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 438 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFILGL 563
>gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 455
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +3
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 60 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 239
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 240 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFILGL 365
>gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +3
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 150 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 329
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 330 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 455
>gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +3
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 153 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 332
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 333 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 458
>gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 134 bits (288), Expect = 6e-031
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = -1 / +2
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 71 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 250
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RVKW+G + IT +TV +FI G WL +PF GL
Sbjct: 251 RVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 376
>gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229744, DNA
sequence
Length = 587
Score = 133 bits (286), Expect = 1e-030
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = -1 / -2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
+TYLGRPWK YSR ++++S + ++ GWL W + DT+YY EY N GPGA GRV
Sbjct: 472 ETYLGRPWKAYSRVIFMKSTISNVRHAKGWLPWEHAAPPDTIYYAEYDNDGPGAAVGGRV 293
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
KW G+ I AAEA FTV FI+G+ WL GT + + GL*
Sbjct: 292 KWSGFHTIQDAAEAINFTVEKFINGNDWLPGTGVDYKPGL* 170
>gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f189n08, DNA
sequence
Length = 689
Score = 98.7 bits (209), Expect(2) = 1e-029
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = -1 / -3
Query: 343 SFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIP 164
S L TL+YGEY N GPGAG +GRVKW GY VI AA AS FTV FIDG WL GT I
Sbjct: 435 STGLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGIT 256
Query: 163 FTTGL 149
FT L
Sbjct: 255 FTADL 241
Score = 51.5 bits (106), Expect(2) = 1e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEW 350
TYLGRPWK +SR V ++S L + GWLEW
Sbjct: 555 TYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 460
>gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 636
Score = 98.7 bits (209), Expect(2) = 1e-029
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = -1 / -3
Query: 343 SFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIP 164
S L TL+YGEY N GPGAG +GRVKW GY VI AA AS FTV FIDG WL GT I
Sbjct: 277 STGLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGIT 98
Query: 163 FTTGL 149
FT L
Sbjct: 97 FTADL 83
Score = 51.5 bits (106), Expect(2) = 1e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEW 350
TYLGRPWK +SR V ++S L + GWLEW
Sbjct: 397 TYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 302
>gb|CW160145.1|CW160145 104_566_11149729_116_36421_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149729, DNA
sequence
Length = 714
Score = 130 bits (278), Expect = 1e-029
Identities = 53/88 (60%), Positives = 61/88 (69%)
Frame = -1 / +2
Query: 406 VYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEA 227
V ++S LD V PAGWLEW+G FAL TLYYGEY NTGPGAGTS RV W G S ++A
Sbjct: 2 VVMESFLDRSVSPAGWLEWSGQFALSTLYYGEYGNTGPGAGTSRRVTWPGVHTSLSRSDA 181
Query: 226 SAFTVGNFIDGDLWLAGTSIPFTTGL*A 143
FTV FI GD WL GT + + +GL*A
Sbjct: 182 VRFTVAEFIVGDAWLGGTGVNYISGL*A 265
>gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 130 bits (278), Expect = 1e-029
Identities = 48/99 (48%), Positives = 62/99 (62%)
Frame = -1 / +1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
TYL RPWK+YSRT+Y+Q+++ +DP GWLEWNG F L+TL+Y E N G GA S R K
Sbjct: 148 TYLARPWKEYSRTLYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMSKRAK 327
Query: 265 WKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W G + +T FTV FI G ++ +PF GL
Sbjct: 328 WGGIKTVTYEEAQKEFTVETFIQGQQFIPKWGVPFIPGL 444
>gb|CW405176.1|CW405176 fsbb001f097k01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097k01, DNA
sequence
Length = 492
Score = 89.5 bits (189), Expect(2) = 8e-029
Identities = 37/61 (60%), Positives = 40/61 (65%)
Frame = -1 / -3
Query: 331 DTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
DT+YYGEY N GPGA GRV W G+RVIT A EA FTV FI G WL T +PF G
Sbjct: 220 DTVYYGEYQNYGPGAALEGRVAWPGHRVITMAEEAMEFTVRWFIAGYSWLPATGLPFVGG 41
Query: 151 L 149
L
Sbjct: 40 L 38
Score = 57.4 bits (119), Expect(2) = 8e-029
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / -3
Query: 451 AKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGS 341
+ TY+GRPWK Y+R VY S + VD AGWL W+ S
Sbjct: 346 SSTYIGRPWKPYARVVYTMSYVGEHVDAAGWLAWDAS 236
>gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090o22, DNA
sequence
Length = 492
Score = 125 bits (267), Expect = 5e-028
Identities = 48/72 (66%), Positives = 55/72 (76%)
Frame = -1 / +1
Query: 442 YLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKW 263
YLGRPW++YSRTV ++S LD V PAGWLEW+G FAL TLYYGEY NTGPGAGTS RV W
Sbjct: 277 YLGRPWRRYSRTVVMESFLDRSVSPAGWLEWSGQFALSTLYYGEYGNTGPGAGTSRRVTW 456
Query: 262 KGYRVITSAAEA 227
G S ++A
Sbjct: 457 PGVHTSLSRSDA 492
>gb|BG356421.1|BG356421 EM1_22_D02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 107 bits (229), Expect(2) = 1e-027
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = -1 / +3
Query: 433 RPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGY 254
RPWK+Y+RTV ++S + L+ P GW EW G L TL Y EY NTGPGAGTS RV W GY
Sbjct: 3 RPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLXYAEYANTGPGAGTSKRVNWPGY 182
Query: 253 RVITSA 236
RVI A
Sbjct: 183 RVIGQA 200
Score = 35.9 bits (72), Expect(2) = 1e-027
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / +3
Query: 247 ITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
+ AEA+ FT G FIDG WL T P G
Sbjct: 186 VIGQAEATHFTAGVFIDGMTWLQSTGTPNVMG 281
>gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f071b07, DNA
sequence
Length = 617
Score = 118 bits (253), Expect = 4e-026
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = -1 / +3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
+YLGRPWK YSRTV++Q+++++LV P GWLEWNG+FALDTLYY EYMN GPGA TS RV
Sbjct: 438 SYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPGADTSARV 614
>gb|CW033818.1|CW033818 104_263_10502173_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502173, DNA
sequence
Length = 513
Score = 98.7 bits (209), Expect(2) = 5e-026
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = -1 / -3
Query: 343 SFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIP 164
S L TL+YGEY N GPGAG +GRVKW GY VI AA AS FTV FIDG WL GT I
Sbjct: 406 STGLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGIT 227
Query: 163 FTTGL 149
FT L
Sbjct: 226 FTADL 212
Score = 39.1 bits (79), Expect(2) = 5e-026
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1 / -3
Query: 430 PWKQYSRTVYLQSELDSLVDPAGWLEW 350
PWK +SR V ++S L + GWLEW
Sbjct: 511 PWKPFSRVVVMESYLXPGIQARGWLEW 431
>gb|BF421136.1|BF421136 FM1_6_H03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 399
Score = 115 bits (246), Expect = 4e-025
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = -1 / +3
Query: 352 WNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGT 173
WN +FALDTLYY EYMN GPGA TS RV W GY V+T+A +A+ FTV +FI GDLWL T
Sbjct: 3 WNATFALDTLYYAEYMNRGPGADTSARVAWPGYHVLTNATDAANFTVLDFIQGDLWLNST 182
Query: 172 SIPFTTG 152
S P+T G
Sbjct: 183 SFPYTLG 203
>gb|CW281479.1|CW281479 104_757_11408201_148_35459_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408201, DNA
sequence
Length = 593
Score = 114 bits (244), Expect = 7e-025
Identities = 45/92 (48%), Positives = 56/92 (60%)
Frame = -1 / -1
Query: 424 KQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVI 245
K++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS RVKW+G + I
Sbjct: 587 KEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSKRVKWRGVKNI 408
Query: 244 TSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
T +TV +FI G WL +PF GL
Sbjct: 407 TYQHALQKYTVESFIQGQHWLPQLGVPFIPGL 312
>gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 113 bits (241), Expect = 2e-024
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = -1 / +1
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ +T+LGRPWK++SRT+Y+QSE+ +DP GWL W G F L T YY E N G GA TS
Sbjct: 265 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 444
Query: 274 RVKWKGYRVITSAAEASAFTV 212
RVKW+G + IT +TV
Sbjct: 445 RVKWRGVKNITYQHALQKYTV 507
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 441,672,538
Number of Sequences: 832831
Number of extensions: 5434827
Number of successful extensions: 171655
Number of sequences better than 1.0e-020: 64
length of database: 163,786,556
effective HSP length: 52
effective length of database: 120,479,344
effective search space used: 11927455056
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)