TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204486.2.1
(607 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG463830.1|BG463830 EM1_51_D11.g1_A002 Embryo 1 (EM1) So... 202 9e-083
gb|CD425713.1|CD425713 SA1_14_G10.b1_A002 Salicylic acid-tr... 201 8e-082
gb|CD222469.1|CD222469 CCC1_22_D09.b1_A007 Callus culture/c... 161 1e-071
gb|BE598075.1|BE598075 PI1_65_D11.b1_A002 Pathogen induced ... 202 4e-067
gb|BE597792.1|BE597792 PI1_65_D11.g1_A002 Pathogen induced ... 161 2e-065
gb|BM318320.1|BM318320 PI1_77_C01.g9_A002 Pathogen induced ... 121 7e-062
gb|CX622799.1|CX622799 GABR1_66_B12.b1_A002 GA- or brassino... 144 9e-035
gb|BG605769.1|BG605769 RHIZ2_81_C06.g1_A003 Rhizome2 (RHIZ2... 144 9e-035
gb|CW270173.1|CW270173 104_741_11402265_148_35326_035 Sorgh... 144 9e-035
gb|BE597944.1|BE597944 PI1_67_D07.g1_A002 Pathogen induced ... 144 9e-035
gb|CX621607.1|CX621607 GABR1_59_C10.b1_A002 GA- or brassino... 144 9e-035
gb|BM323395.1|BM323395 PIC1_18_G08.b1_A002 Pathogen-infecte... 144 9e-035
gb|BM327897.1|BM327897 PIC1_18_G10.g1_A002 Pathogen-infecte... 145 6e-034
gb|CB926266.1|CB926266 ABA1_7_D05.b1_A012 Abscisic acid-tre... 145 6e-034
gb|CF074097.1|CF074097 FE1_21_G09.b1_A002 Iron-deficient se... 145 6e-034
gb|CF489369.1|CF489369 POL1_57_E02.b1_A002 Pollen Sorghum b... 145 6e-034
gb|CN127274.1|CN127274 RHOH1_22_B10.b1_A002 Acid- and alkal... 145 6e-034
gb|BG947743.1|BG947743 IP1_8_E11.g1_A002 Immature pannicle ... 143 3e-033
gb|CF485548.1|CF485548 POL1_32_E07.b1_A002 Pollen Sorghum b... 143 3e-033
gb|CW349825.1|CW349825 fsbb001f010n13k0 Sorghum methylation... 137 1e-031
gb|BI139654.1|BI139654 IP1_47_D08.g1_A002 Immature pannicle... 137 1e-031
gb|CX617676.1|CX617676 GABR1_35_D02.b1_A002 GA- or brassino... 137 1e-031
gb|BM328221.1|BM328221 PIC1_22_E06.g1_A002 Pathogen-infecte... 136 3e-031
gb|BG049572.1|BG049572 EM1_6_A04.g1_A002 Embryo 1 (EM1) Sor... 117 5e-031
gb|CW172616.1|CW172616 104_583_11156384_148_36539_018 Sorgh... 127 1e-028
gb|CW220298.1|CW220298 104_654_11197276_148_37151_002 Sorgh... 127 1e-028
gb|CW375588.1|CW375588 fsbb001f053a12f0 Sorghum methylation... 123 2e-027
gb|BM327663.1|BM327663 PIC1_8_G09.g1_A002 Pathogen-infected... 123 3e-027
gb|BE364705.2|BE364705 PI1_14_A03.g1_A002 Pathogen induced ... 111 3e-027
gb|BE359249.1|BE359249 DG1_39_F09.g1_A002 Dark Grown 1 (DG1... 120 2e-026
gb|CW292536.1|CW292536 104_772_11414140_148_35584_006 Sorgh... 115 6e-025
gb|CW292535.1|CW292535 104_772_11414140_116_35580_006 Sorgh... 114 1e-024
gb|CW131072.1|CW131072 104_513_11115469_148_34776_049 Sorgh... 112 5e-024
gb|CW402058.1|CW402058 fsbb001f093c24k0 Sorghum methylation... 111 7e-024
gb|CL158677.1|CL158677 104_347_10803702_116_31378_294 Sorgh... 109 3e-023
gb|CW212826.1|CW212826 104_644_11191229_148_37031_029 Sorgh... 109 3e-023
gb|BG239921.1|BG239921 OV1_30_G05.g1_A002 Ovary 1 (OV1) Sor... 109 5e-023
gb|CW443161.1|CW443161 fsbb001f163c01f0 Sorghum methylation... 108 5e-023
gb|BF585847.1|BF585847 FM1_25_C03.g1_A003 Floral-Induced Me... 107 1e-022
gb|CL190191.1|CL190191 104_408_10905918_116_32504_029 Sorgh... 106 2e-022
gb|CW177386.1|CW177386 104_590_11158996_148_36592_004 Sorgh... 106 2e-022
gb|CW255369.1|CW255369 104_720_11226198_116_35131_031 Sorgh... 106 2e-022
gb|CW297785.1|CW297785 104_780_11462225_148_35650_077 Sorgh... 106 2e-022
gb|CN139765.1|CN139765 OX1_24_B04.b1_A002 Oxidatively-stres... 106 3e-022
gb|CW158061.1|CW158061 104_561_11147854_148_36393_085 Sorgh... 105 6e-022
gb|CW176561.1|CW176561 104_589_11158552_148_36588_056 Sorgh... 105 6e-022
gb|BI099266.1|BI099266 IP1_40_G03.g1_A002 Immature pannicle... 105 6e-022
gb|CL167649.1|CL167649 104_364_10810226_114_31802_290 Sorgh... 105 8e-022
gb|CW155360.1|CW155360 104_557_11146098_116_36358_065 Sorgh... 105 8e-022
gb|CW155361.1|CW155361 104_557_11146098_148_36357_065 Sorgh... 105 8e-022
gb|CW300038.1|CW300038 104_783_11463435_148_36250_012 Sorgh... 105 8e-022
gb|CW378016.1|CW378016 fsbb001f056j13f0 Sorghum methylation... 105 8e-022
gb|CF428677.1|CF428677 PH1_17_E09.b1_A002 Phosphorous-defic... 104 2e-021
gb|CW212825.1|CW212825 104_644_11191229_116_37030_029 Sorgh... 102 4e-021
gb|BM326688.1|BM326688 PIC1_1_C07.g1_A002 Pathogen-infected... 102 4e-021
>gb|BG463830.1|BG463830 EM1_51_D11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 202 bits (435), Expect(5) = 8e-066
Identities = 82/100 (82%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 6 AIARHGLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL 185
A+ARHGLYG+DD VPISI WQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL
Sbjct: 37 AVARHGLYGKDDHVPISIFWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL 216
Query: 186 TTVALGNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
TTVALGNYLS R+G IGWIPENLNRGHLD
Sbjct: 217 TTVALGNYLSTVLVTIVTHITTRNGNIGWIPENLNRGHLD 336
Score = 169 bits (364), Expect(6) = 9e-083
Identities = 70/74 (94%), Positives = 70/74 (94%)
Frame = -3 / -3
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPADGDG 48
HQ RAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLP DGDG
Sbjct: 258 HQHRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPEDGDG 79
Query: 47 HDVVLAVQAVPRDG 6
H VVLAVQAVPR G
Sbjct: 78 HVVVLAVQAVPRHG 37
Score = 153 bits (328), Expect(4) = 3e-055
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = -1 / -1
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSSPYR 23
PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQ+MEMGT SS PYR
Sbjct: 233 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQKMEMGTWSSLPYR 54
Query: 22 PCRAMA 5
PCRA A
Sbjct: 53 PCRATA 36
Score = 117 bits (250), Expect(6) = 9e-083
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -1 / -1
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRLSTASSQKK*SRWPRLRFSGIHPM P
Sbjct: 455 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLSTASSQKK*SRWPRLRFSGIHPMLP 288
Score = 79.9 bits (168), Expect(4) = 2e-026
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2 / +3
Query: 68 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 163
DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE
Sbjct: 99 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 194
Score = 75.3 bits (158), Expect(4) = 3e-055
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 428 TVLPFGARVIIGRLLVLVPAGDDEVGKEVEKAEHGEQP 315
+VLPFG R IIGRLLVLVP GDDEV +EVE+AEHGEQP
Sbjct: 459 SVLPFGVRDIIGRLLVLVPGGDDEVDEEVEEAEHGEQP 346
Score = 51.9 bits (107), Expect(5) = 8e-066
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +3
Query: 347 PCLPRHRQLVQVQEDGR*LPWRQRGA 424
P LPRHR LVQVQEDGR* P RQRGA
Sbjct: 378 PRLPRHRHLVQVQEDGR*YPGRQRGA 455
Score = 50.1 bits (103), Expect(4) = 2e-026
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 363 IASWYKYKKTADDYPGAKGEH 425
IA+WYKYKKTADD P AKGEH
Sbjct: 394 IATWYKYKKTADDIPDAKGEH 456
Score = 41.4 bits (84), Expect(6) = 9e-083
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 255 AWW*CG*RWSPGPC*G 208
+WW*C *RWSP PC*G
Sbjct: 286 SWW*CA*RWSPAPC*G 239
Score = 25.4 bits (49), Expect(5) = 8e-066
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 421 STVQSTDGRDGGNGVISMCG 480
S + + RDG N VIS+CG
Sbjct: 492 SMMADSVNRDGENEVISLCG 551
Score = 25.4 bits (49), Expect(6) = 9e-083
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 481 NHT*KSLHFRHLAHQCSVPC 422
+H KSLHFRHL C
Sbjct: 552 DHREKSLHFRHLGSLSRPSC 493
Score = 24.9 bits (48), Expect(4) = 2e-026
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 447 RWRKWSDFYVW 479
RWRK SDF +W
Sbjct: 518 RWRK*SDFSLW 550
Score = 24.9 bits (48), Expect(4) = 3e-055
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -1
Query: 537 LTFKHPNCGKTSRQTGRQLTTHRNHSIS 454
++FKH + GKT+RQ H +IS
Sbjct: 599 VSFKHTDSGKTNRQLTTTERNHFIFAIS 516
Score = 24.9 bits (48), Expect(6) = 9e-083
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 598 NT*HVNNQFAP 566
NT*H+NN FAP
Sbjct: 653 NT*HLNNGFAP 621
Score = 24.0 bits (46), Expect(5) = 8e-066
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 479 VSCLPVCRLVLPQFGCLN 532
+S + CR VLP+ CLN
Sbjct: 541 LSVVVSCRFVLPESVCLN 594
Score = 23.5 bits (45), Expect(5) = 8e-066
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 567 GANWLFTCHVFI 602
GAN LF CHV +
Sbjct: 622 GANPLFRCHVLV 657
Score = 22.6 bits (43), Expect(6) = 9e-083
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 533 RLSTQTVAKQ 504
RLSTQT+AKQ
Sbjct: 595 RLSTQTLAKQ 566
Score = 22.1 bits (42), Expect(4) = 2e-026
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 492 LSVDLFCHSLGA*TLTYV 545
L+ LFC SL A*T+ V
Sbjct: 554 LAAGLFCQSLCA*TILLV 607
Score = 21.7 bits (41), Expect(4) = 3e-055
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 599 KHMTCKQPIRPR 564
+HMT +Q IRPR
Sbjct: 654 QHMTSEQWIRPR 619
>gb|CD425713.1|CD425713 SA1_14_G10.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_14_G10_A002 3', mRNA sequence
Length = 666
Score = 201 bits (434), Expect(5) = 1e-065
Identities = 82/100 (82%), Positives = 85/100 (85%)
Frame = +3 / +2
Query: 6 AIARHGLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL 185
A+ARHGLYG+DD VPISI WQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL
Sbjct: 5 AVARHGLYGKDDHVPISIFWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL 184
Query: 186 TTVALGNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
TTVALGNYLS R+G IGWIPENLNRGHLD
Sbjct: 185 TTVALGNYLSTVPVTIVTHITTRNGNIGWIPENLNRGHLD 304
Score = 167 bits (360), Expect(6) = 8e-082
Identities = 69/74 (93%), Positives = 70/74 (94%)
Frame = -3 / -3
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPADGDG 48
H+ RAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLP DGDG
Sbjct: 226 HRHRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPEDGDG 47
Query: 47 HDVVLAVQAVPRDG 6
H VVLAVQAVPR G
Sbjct: 46 HVVVLAVQAVPRHG 5
Score = 153 bits (328), Expect(4) = 2e-054
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = -1 / -1
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSSPYR 23
PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQ+MEMGT SS PYR
Sbjct: 201 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQKMEMGTWSSLPYR 22
Query: 22 PCRAMA 5
PCRA A
Sbjct: 21 PCRATA 4
Score = 115 bits (246), Expect(6) = 8e-082
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = -1 / -1
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRL TASSQKK*SRWPRLRFSGIHPM P
Sbjct: 423 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLGTASSQKK*SRWPRLRFSGIHPMLP 256
Score = 79.9 bits (168), Expect(4) = 1e-026
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2 / +1
Query: 68 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 163
DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE
Sbjct: 67 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 162
Score = 72.1 bits (151), Expect(4) = 2e-054
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -3 / -3
Query: 428 TVLPFGARVIIGRLLVLVPAGDDEVGKEVEKAEHGEQP 315
+VLPFG R IIGRLLVLVP GDDEV +EVE+A HGEQP
Sbjct: 427 SVLPFGVRDIIGRLLVLVPGGDDEVDEEVEEAGHGEQP 314
Score = 51.9 bits (107), Expect(5) = 1e-065
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 347 PCLPRHRQLVQVQEDGR*LPWRQRGA 424
P LPRHR LVQVQEDGR* P RQRGA
Sbjct: 346 PRLPRHRHLVQVQEDGR*YPGRQRGA 423
Score = 50.1 bits (103), Expect(4) = 1e-026
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 363 IASWYKYKKTADDYPGAKGEH 425
IA+WYKYKKTADD P AKGEH
Sbjct: 362 IATWYKYKKTADDIPDAKGEH 424
Score = 41.4 bits (84), Expect(6) = 8e-082
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 255 AWW*CG*RWSPGPC*G 208
+WW*C *RWSP PC*G
Sbjct: 254 SWW*CA*RWSPAPC*G 207
Score = 25.4 bits (49), Expect(5) = 1e-065
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 421 STVQSTDGRDGGNGVISMCG 480
S + + RDG N VIS+CG
Sbjct: 460 SMMADSVNRDGENEVISLCG 519
Score = 25.4 bits (49), Expect(6) = 8e-082
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 481 NHT*KSLHFRHLAHQCSVPC 422
+H KSLHFRHL C
Sbjct: 520 DHREKSLHFRHLGSLSRPSC 461
Score = 24.9 bits (48), Expect(4) = 1e-026
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 447 RWRKWSDFYVW 479
RWRK SDF +W
Sbjct: 486 RWRK*SDFSLW 518
Score = 24.9 bits (48), Expect(4) = 2e-054
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -1
Query: 537 LTFKHPNCGKTSRQTGRQLTTHRNHSIS 454
++FKH + GKT+RQ H +IS
Sbjct: 567 VSFKHTDSGKTNRQLTTTERNHFIFAIS 484
Score = 24.9 bits (48), Expect(6) = 8e-082
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 598 NT*HVNNQFAP 566
NT*H+NN FAP
Sbjct: 621 NT*HLNNGFAP 589
Score = 24.0 bits (46), Expect(5) = 1e-065
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 479 VSCLPVCRLVLPQFGCLN 532
+S + CR VLP+ CLN
Sbjct: 509 LSVVVSCRFVLPESVCLN 562
Score = 23.5 bits (45), Expect(5) = 1e-065
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 567 GANWLFTCHVFI 602
GAN LF CHV +
Sbjct: 590 GANPLFRCHVLV 625
Score = 22.6 bits (43), Expect(6) = 8e-082
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 533 RLSTQTVAKQ 504
RLSTQT+AKQ
Sbjct: 563 RLSTQTLAKQ 534
Score = 22.1 bits (42), Expect(4) = 1e-026
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 492 LSVDLFCHSLGA*TLTYV 545
L+ LFC SL A*T+ V
Sbjct: 522 LAAGLFCQSLCA*TILLV 575
Score = 21.7 bits (41), Expect(4) = 2e-054
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 599 KHMTCKQPIRPR 564
+HMT +Q IRPR
Sbjct: 622 QHMTSEQWIRPR 587
>gb|CD222469.1|CD222469 CCC1_22_D09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_22_D09_A007 3', mRNA sequence
Length = 598
Score = 161 bits (346), Expect(5) = 7e-054
Identities = 66/80 (82%), Positives = 67/80 (83%)
Frame = +3 / +3
Query: 66 QIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXXXXX 245
QIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLS
Sbjct: 3 QIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSTVLVTIVTHI 182
Query: 246 XXRHGRIGWIPENLNRGHLD 305
R+G IGWIPENLNRGHLD
Sbjct: 183 TTRNGNIGWIPENLNRGHLD 242
Score = 130 bits (279), Expect(6) = 1e-071
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3 / -3
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYL 66
HQ RAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYL
Sbjct: 164 HQHRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYL 3
Score = 117 bits (250), Expect(6) = 1e-071
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -1 / -1
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRLSTASSQKK*SRWPRLRFSGIHPM P
Sbjct: 361 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLSTASSQKK*SRWPRLRFSGIHPMLP 194
Score = 114 bits (244), Expect(4) = 4e-044
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1 / -1
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGIC 65
PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGIC
Sbjct: 139 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGIC 2
Score = 79.9 bits (168), Expect(4) = 1e-026
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2 / +2
Query: 68 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 163
DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE
Sbjct: 5 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 100
Score = 75.3 bits (158), Expect(4) = 4e-044
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 428 TVLPFGARVIIGRLLVLVPAGDDEVGKEVEKAEHGEQP 315
+VLPFG R IIGRLLVLVP GDDEV +EVE+AEHGEQP
Sbjct: 365 SVLPFGVRDIIGRLLVLVPGGDDEVDEEVEEAEHGEQP 252
Score = 51.9 bits (107), Expect(5) = 7e-054
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 347 PCLPRHRQLVQVQEDGR*LPWRQRGA 424
P LPRHR LVQVQEDGR* P RQRGA
Sbjct: 284 PRLPRHRHLVQVQEDGR*YPGRQRGA 361
Score = 50.1 bits (103), Expect(4) = 1e-026
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 363 IASWYKYKKTADDYPGAKGEH 425
IA+WYKYKKTADD P AKGEH
Sbjct: 300 IATWYKYKKTADDIPDAKGEH 362
Score = 41.4 bits (84), Expect(6) = 1e-071
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 255 AWW*CG*RWSPGPC*G 208
+WW*C *RWSP PC*G
Sbjct: 192 SWW*CA*RWSPAPC*G 145
Score = 25.4 bits (49), Expect(5) = 7e-054
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 421 STVQSTDGRDGGNGVISMCG 480
S + + RDG N VIS+CG
Sbjct: 398 SMMADSVNRDGENEVISLCG 457
Score = 25.4 bits (49), Expect(6) = 1e-071
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 481 NHT*KSLHFRHLAHQCSVPC 422
+H KSLHFRHL C
Sbjct: 458 DHREKSLHFRHLGSLSRPSC 399
Score = 24.9 bits (48), Expect(4) = 1e-026
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 447 RWRKWSDFYVW 479
RWRK SDF +W
Sbjct: 424 RWRK*SDFSLW 456
Score = 24.9 bits (48), Expect(4) = 4e-044
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -1
Query: 537 LTFKHPNCGKTSRQTGRQLTTHRNHSIS 454
++FKH + GKT+RQ H +IS
Sbjct: 505 VSFKHTDSGKTNRQLTTTERNHFIFAIS 422
Score = 24.9 bits (48), Expect(6) = 1e-071
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 598 NT*HVNNQFAP 566
NT*H+NN FAP
Sbjct: 559 NT*HLNNGFAP 527
Score = 24.0 bits (46), Expect(5) = 7e-054
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 479 VSCLPVCRLVLPQFGCLN 532
+S + CR VLP+ CLN
Sbjct: 447 LSVVVSCRFVLPESVCLN 500
Score = 23.5 bits (45), Expect(5) = 7e-054
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 567 GANWLFTCHVFI 602
GAN LF CHV +
Sbjct: 528 GANPLFRCHVLV 563
Score = 22.6 bits (43), Expect(6) = 1e-071
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 533 RLSTQTVAKQ 504
RLSTQT+AKQ
Sbjct: 501 RLSTQTLAKQ 472
Score = 22.1 bits (42), Expect(4) = 1e-026
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 492 LSVDLFCHSLGA*TLTYV 545
L+ LFC SL A*T+ V
Sbjct: 460 LAAGLFCQSLCA*TILLV 513
Score = 21.7 bits (41), Expect(4) = 4e-044
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 599 KHMTCKQPIRPR 564
+HMT +Q IRPR
Sbjct: 560 QHMTSEQWIRPR 525
>gb|BE598075.1|BE598075 PI1_65_D11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 542
Score = 202 bits (435), Expect = 5e-051
Identities = 82/100 (82%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 6 AIARHGLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL 185
A+ARHGLYG+DD VPISI WQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL
Sbjct: 174 AVARHGLYGKDDHVPISIFWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSL 353
Query: 186 TTVALGNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
TTVALGNYLS R+G IGWIPENLNRGHLD
Sbjct: 354 TTVALGNYLSTVLVTIVTHITTRNGNIGWIPENLNRGHLD 473
Score = 169 bits (364), Expect(3) = 4e-067
Identities = 70/74 (94%), Positives = 70/74 (94%)
Frame = -3 / -1
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPADGDG 48
HQ RAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLP DGDG
Sbjct: 395 HQHRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPEDGDG 216
Query: 47 HDVVLAVQAVPRDG 6
H VVLAVQAVPR G
Sbjct: 215 HVVVLAVQAVPRHG 174
Score = 153 bits (328), Expect(2) = 2e-043
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = -1 / -2
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSSPYR 23
PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQ+MEMGT SS PYR
Sbjct: 370 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQKMEMGTWSSLPYR 191
Query: 22 PCRAMA 5
PCRA A
Sbjct: 190 PCRATA 173
Score = 84.0 bits (177), Expect(3) = 4e-067
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -1 / -2
Query: 373 QLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
Q+AMTR* RKLRRLSTASSQKK*SRWPRLRFSGIHPM P
Sbjct: 541 QVAMTR*TRKLRRLSTASSQKK*SRWPRLRFSGIHPMLP 425
Score = 43.7 bits (89), Expect(2) = 2e-043
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 374 PAGDDEVGKEVEKAEHGEQP 315
P GDDEV +EVE+AEHGEQP
Sbjct: 542 PGGDDEVDEEVEEAEHGEQP 483
Score = 41.4 bits (84), Expect(3) = 4e-067
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -3
Query: 255 AWW*CG*RWSPGPC*G 208
+WW*C *RWSP PC*G
Sbjct: 423 SWW*CA*RWSPAPC*G 376
>gb|BE597792.1|BE597792 PI1_65_D11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 414
Score = 161 bits (346), Expect(2) = 3e-048
Identities = 66/80 (82%), Positives = 67/80 (83%)
Frame = +3 / +3
Query: 66 QIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXXXXX 245
QIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLS
Sbjct: 3 QIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSTVLVTIVTHI 182
Query: 246 XXRHGRIGWIPENLNRGHLD 305
R+G IGWIPENLNRGHLD
Sbjct: 183 TTRNGNIGWIPENLNRGHLD 242
Score = 130 bits (279), Expect(3) = 2e-065
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3 / -2
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYL 66
HQ RAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYL
Sbjct: 164 HQHRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYL 3
Score = 117 bits (250), Expect(3) = 2e-065
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -1 / -3
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRLSTASSQKK*SRWPRLRFSGIHPM P
Sbjct: 361 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLSTASSQKK*SRWPRLRFSGIHPMLP 194
Score = 114 bits (244), Expect(2) = 3e-041
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1 / -3
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGIC 65
PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGIC
Sbjct: 139 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGIC 2
Score = 79.9 bits (168), Expect(2) = 3e-023
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2 / +2
Query: 68 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 163
DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE
Sbjct: 5 DTAVLHHRVRGGVHLRGAAGVLLRPGARRHEE 100
Score = 75.3 bits (158), Expect(2) = 3e-041
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -3 / -2
Query: 428 TVLPFGARVIIGRLLVLVPAGDDEVGKEVEKAEHGEQP 315
+VLPFG R IIGRLLVLVP GDDEV +EVE+AEHGEQP
Sbjct: 365 SVLPFGVRDIIGRLLVLVPGGDDEVDEEVEEAEHGEQP 252
Score = 51.9 bits (107), Expect(2) = 3e-048
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 347 PCLPRHRQLVQVQEDGR*LPWRQRGA 424
P LPRHR LVQVQEDGR* P RQRGA
Sbjct: 284 PRLPRHRHLVQVQEDGR*YPGRQRGA 361
Score = 50.1 bits (103), Expect(2) = 3e-023
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 363 IASWYKYKKTADDYPGAKGEH 425
IA+WYKYKKTADD P AKGEH
Sbjct: 300 IATWYKYKKTADDIPDAKGEH 362
Score = 41.4 bits (84), Expect(3) = 2e-065
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -1
Query: 255 AWW*CG*RWSPGPC*G 208
+WW*C *RWSP PC*G
Sbjct: 192 SWW*CA*RWSPAPC*G 145
>gb|BM318320.1|BM318320 PI1_77_C01.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 121 bits (258), Expect(5) = 2e-043
Identities = 50/65 (76%), Positives = 51/65 (78%)
Frame = +3 / +1
Query: 111 FVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXXXXXXXRHGRIGWIPENLN 290
FVGQLEF YDQAPDAMRSMCSALSLTTVALGNYLS R+G IGWIPENLN
Sbjct: 1 FVGQLEFXYDQAPDAMRSMCSALSLTTVALGNYLSTVLVTIVTHITTRNGNIGWIPENLN 180
Query: 291 RGHLD 305
RGHLD
Sbjct: 181 RGHLD 195
Score = 117 bits (250), Expect(6) = 7e-062
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -1 / -3
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRLSTASSQKK*SRWPRLRFSGIHPM P
Sbjct: 314 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLSTASSQKK*SRWPRLRFSGIHPMLP 147
Score = 85.8 bits (181), Expect(6) = 7e-062
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = -3 / -2
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHE 111
HQ RAEVVAERDGGERQRGAHAPHGVGRLVV +LQL HE
Sbjct: 117 HQHRAEVVAERDGGERQRGAHAPHGVGRLVVXKLQLAHE 1
Score = 75.3 bits (158), Expect(5) = 3e-032
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -3 / -2
Query: 428 TVLPFGARVIIGRLLVLVPAGDDEVGKEVEKAEHGEQP 315
+VLPFG R IIGRLLVLVP GDDEV +EVE+AEHGEQP
Sbjct: 318 SVLPFGVRDIIGRLLVLVPGGDDEVDEEVEEAEHGEQP 205
Score = 64.8 bits (135), Expect(5) = 3e-032
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1 / -3
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPT 113
PSATVVSDSAEHMLLMASGAWS KNSS PT
Sbjct: 92 PSATVVSDSAEHMLLMASGAWSXKNSSWPT 3
Score = 51.9 bits (107), Expect(5) = 2e-043
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +3
Query: 347 PCLPRHRQLVQVQEDGR*LPWRQRGA 424
P LPRHR LVQVQEDGR* P RQRGA
Sbjct: 237 PRLPRHRHLVQVQEDGR*YPGRQRGA 314
Score = 41.4 bits (84), Expect(6) = 7e-062
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -1
Query: 255 AWW*CG*RWSPGPC*G 208
+WW*C *RWSP PC*G
Sbjct: 145 SWW*CA*RWSPAPC*G 98
Score = 34.5 bits (69), Expect(6) = 7e-062
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1 / -2
Query: 499 TDRQTANHT*KSLHFRHLAHQCSVPC 422
T+RQ NH KSLHFRHL C
Sbjct: 429 TNRQLTNHREKSLHFRHLGSLSRPSC 352
Score = 29.5 bits (58), Expect(5) = 2e-043
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 446 EMAEME*FLCVVSCLPVC 499
EMA+M+*FL VV LPVC
Sbjct: 376 EMAKMK*FLSVVR*LPVC 429
Score = 27.2 bits (53), Expect(5) = 3e-032
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 504 SRQTGRQLTTHRNHSISAIS 445
++QTG TT RNH I AIS
Sbjct: 434 AKQTGS*RTTERNHFIFAIS 375
Score = 24.9 bits (48), Expect(6) = 7e-062
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 598 NT*HVNNQFAP 566
NT*H+NN FAP
Sbjct: 513 NT*HLNNGFAP 481
Score = 24.4 bits (47), Expect(6) = 7e-062
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 537 LTFKHPNCGKTSRQ 496
++FKH + GKT+RQ
Sbjct: 459 VSFKHTDSGKTNRQ 418
Score = 23.5 bits (45), Expect(5) = 2e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 567 GANWLFTCHVFI 602
GAN LF CHV +
Sbjct: 482 GANPLFRCHVLV 517
Score = 23.5 bits (45), Expect(5) = 2e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 497 CRLVLPQFGCLN 532
CR VLP+ CLN
Sbjct: 419 CRFVLPESVCLN 454
Score = 22.6 bits (43), Expect(5) = 3e-032
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 533 RLSTQTVAKQ 504
RLSTQT+AKQ
Sbjct: 455 RLSTQTLAKQ 426
Score = 21.7 bits (41), Expect(5) = 3e-032
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 599 KHMTCKQPIRPR 564
+HMT +Q IRPR
Sbjct: 514 QHMTSEQWIRPR 479
>gb|CX622799.1|CX622799 GABR1_66_B12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_B12_A002 3', mRNA sequence
Length = 739
Score = 144 bits (308), Expect(2) = 9e-035
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3 / +2
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS LS+T+ ALGNY+S
Sbjct: 59 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLSMTSFALGNYVSSAL 238
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R GR GWIP+++NR HLD
Sbjct: 239 VTVVARATARGGRDGWIPDDINRAHLD 319
Score = 125 bits (268), Expect = 5e-028
Identities = 63/124 (50%), Positives = 70/124 (56%)
Frame = -1 / -2
Query: 391 VFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRPCXXXXXXXXXXXXXX 212
+FLY+YQ AM+R* KL S ASSQKK*SR RL SGIHP RP
Sbjct: 405 LFLYVYQRAMSR*TPKLPTQSMASSQKK*SRCARLMSSGIHPSRPPRAVARATTVTSAEL 226
Query: 211 XXLPSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSS 32
LPSA V + E L +ASGAWS*KNS CP VNTS P YCG CQ+M+ G S
Sbjct: 225 T*LPSAKDVMERPEQRLRIASGAWS*KNSICPMNVNTSEAPTTTYCGTCQKMDSGRYRPS 46
Query: 31 PYRP 20
P
Sbjct: 45 SPPP 34
Score = 24.0 bits (46), Expect(2) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 353 LPRHRQLVQVQED 391
LP HR LV VQE+
Sbjct: 367 LPAHRALVHVQEE 405
>gb|BG605769.1|BG605769 RHIZ2_81_C06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 700
Score = 144 bits (308), Expect(2) = 9e-035
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3 / +2
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS LS+T+ ALGNY+S
Sbjct: 104 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLSMTSFALGNYVSSAL 283
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R GR GWIP+++NR HLD
Sbjct: 284 VTVVARATARGGRDGWIPDDINRAHLD 364
Score = 125 bits (267), Expect = 7e-028
Identities = 63/124 (50%), Positives = 70/124 (56%)
Frame = -1 / -2
Query: 391 VFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRPCXXXXXXXXXXXXXX 212
+FLY+YQ AM+R* KL S ASSQKK*SR RL SGIHP RP
Sbjct: 450 LFLYVYQRAMSR*TPKLPTQSMASSQKK*SRCARLMSSGIHPSRPPRAVARATTVTSAEL 271
Query: 211 XXLPSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSS 32
LPSA V + E L +ASGAWS*KNS CP VNTS P YCG CQ+M+ G S
Sbjct: 270 T*LPSAKDVMERPEQRLRIASGAWS*KNSICPMNVNTSDAPTTTYCGTCQKMDSGRYRPS 91
Query: 31 PYRP 20
P
Sbjct: 90 SPPP 79
Score = 24.0 bits (46), Expect(2) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 353 LPRHRQLVQVQED 391
LP HR LV VQE+
Sbjct: 412 LPAHRALVHVQEE 450
>gb|CW270173.1|CW270173 104_741_11402265_148_35326_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402265, DNA
sequence
Length = 605
Score = 144 bits (308), Expect(2) = 9e-035
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3 / -2
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS LS+T+ ALGNY+S
Sbjct: 430 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLSMTSFALGNYVSSAL 251
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R GR GWIP+++NR HLD
Sbjct: 250 VTVVARATARGGRDGWIPDDINRAHLD 170
Score = 125 bits (267), Expect = 7e-028
Identities = 63/124 (50%), Positives = 70/124 (56%)
Frame = -1 / +3
Query: 391 VFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRPCXXXXXXXXXXXXXX 212
+FLY+YQ AM+R* KL S ASSQKK*SR RL SGIHP RP
Sbjct: 84 LFLYVYQRAMSR*TPKLPTQSMASSQKK*SRCARLMSSGIHPSRPPRAVARATTVTSAEL 263
Query: 211 XXLPSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSS 32
LPSA V + E L +ASGAWS*KNS CP VNTS P YCG CQ+M+ G S
Sbjct: 264 T*LPSAKDVMERPEQRLRIASGAWS*KNSICPMNVNTSDAPTTTYCGTCQKMDSGRYRPS 443
Query: 31 PYRP 20
P
Sbjct: 444 SPPP 455
Score = 24.0 bits (46), Expect(2) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 353 LPRHRQLVQVQED 391
LP HR LV VQE+
Sbjct: 122 LPAHRALVHVQEE 84
>gb|BE597944.1|BE597944 PI1_67_D07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 584
Score = 144 bits (308), Expect(2) = 9e-035
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3 / +3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS LS+T+ ALGNY+S
Sbjct: 159 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLSMTSFALGNYVSSAL 338
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R GR GWIP+++NR HLD
Sbjct: 339 VTVVARATARGGRDGWIPDDINRAHLD 419
Score = 125 bits (267), Expect = 7e-028
Identities = 63/124 (50%), Positives = 70/124 (56%)
Frame = -1 / -2
Query: 391 VFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRPCXXXXXXXXXXXXXX 212
+FLY+YQ AM+R* KL S ASSQKK*SR RL SGIHP RP
Sbjct: 505 LFLYVYQRAMSR*TPKLPTQSMASSQKK*SRCARLMSSGIHPSRPPRAVARATTVTSAEL 326
Query: 211 XXLPSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSS 32
LPSA V + E L +ASGAWS*KNS CP VNTS P YCG CQ+M+ G S
Sbjct: 325 T*LPSAKDVMERPEQRLRIASGAWS*KNSICPMNVNTSDAPTTTYCGTCQKMDSGRYRPS 146
Query: 31 PYRP 20
P
Sbjct: 145 SPPP 134
Score = 24.0 bits (46), Expect(2) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 353 LPRHRQLVQVQED 391
LP HR LV VQE+
Sbjct: 467 LPAHRALVHVQEE 505
>gb|CX621607.1|CX621607 GABR1_59_C10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_59_C10_A002 3', mRNA sequence
Length = 553
Score = 144 bits (308), Expect(2) = 9e-035
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3 / +2
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS LS+T+ ALGNY+S
Sbjct: 113 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLSMTSFALGNYVSSAL 292
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R GR GWIP+++NR HLD
Sbjct: 293 VTVVARATARGGRDGWIPDDINRAHLD 373
Score = 125 bits (267), Expect = 7e-028
Identities = 63/124 (50%), Positives = 70/124 (56%)
Frame = -1 / -2
Query: 391 VFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRPCXXXXXXXXXXXXXX 212
+FLY+YQ AM+R* KL S ASSQKK*SR RL SGIHP RP
Sbjct: 459 LFLYVYQRAMSR*TPKLPTQSMASSQKK*SRCARLMSSGIHPSRPPRAVARATTVTSAEL 280
Query: 211 XXLPSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSS 32
LPSA V + E L +ASGAWS*KNS CP VNTS P YCG CQ+M+ G S
Sbjct: 279 T*LPSAKDVMERPEQRLRIASGAWS*KNSICPMNVNTSDAPTTTYCGTCQKMDSGRYRPS 100
Query: 31 PYRP 20
P
Sbjct: 99 SPPP 88
Score = 24.0 bits (46), Expect(2) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 353 LPRHRQLVQVQED 391
LP HR LV VQE+
Sbjct: 421 LPAHRALVHVQEE 459
>gb|BM323395.1|BM323395 PIC1_18_G08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 498
Score = 144 bits (308), Expect(2) = 9e-035
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3 / +1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS LS+T+ ALGNY+S
Sbjct: 82 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLSMTSFALGNYVSSAL 261
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R GR GWIP+++NR HLD
Sbjct: 262 VTVVARATARGGRDGWIPDDINRAHLD 342
Score = 125 bits (267), Expect = 7e-028
Identities = 63/124 (50%), Positives = 70/124 (56%)
Frame = -1 / -2
Query: 391 VFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRPCXXXXXXXXXXXXXX 212
+FLY+YQ AM+R* KL S ASSQKK*SR RL SGIHP RP
Sbjct: 428 LFLYVYQRAMSR*TPKLPTQSMASSQKK*SRCARLMSSGIHPSRPPRAVARATTVTSAEL 249
Query: 211 XXLPSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSS 32
LPSA V + E L +ASGAWS*KNS CP VNTS P YCG CQ+M+ G S
Sbjct: 248 T*LPSAKDVMERPEQRLRIASGAWS*KNSICPMNVNTSDAPTTTYCGTCQKMDSGRYRPS 69
Query: 31 PYRP 20
P
Sbjct: 68 SPPP 57
Score = 24.0 bits (46), Expect(2) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 353 LPRHRQLVQVQED 391
LP HR LV VQE+
Sbjct: 390 LPAHRALVHVQEE 428
>gb|BM327897.1|BM327897 PIC1_18_G10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 635
Score = 145 bits (311), Expect = 6e-034
Identities = 57/87 (65%), Positives = 65/87 (74%)
Frame = +3 / +3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 63 VPLSIFWQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFI 242
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 243 LTMVAYFTTRGGNPGWIPDNLNEGHLD 323
>gb|CB926266.1|CB926266 ABA1_7_D05.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_7_D05_A012 3', mRNA sequence
Length = 589
Score = 145 bits (311), Expect = 6e-034
Identities = 57/87 (65%), Positives = 65/87 (74%)
Frame = +3 / +3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 18 VPLSIFWQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFI 197
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 198 LTMVAYFTTRGGNPGWIPDNLNEGHLD 278
>gb|CF074097.1|CF074097 FE1_21_G09.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_21_G09_A002 3', mRNA sequence
Length = 587
Score = 145 bits (311), Expect = 6e-034
Identities = 57/87 (65%), Positives = 65/87 (74%)
Frame = +3 / +1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 16 VPLSIFWQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFI 195
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 196 LTMVAYFTTRGGNPGWIPDNLNEGHLD 276
>gb|CF489369.1|CF489369 POL1_57_E02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_E02_A002 3', mRNA sequence
Length = 629
Score = 145 bits (311), Expect = 6e-034
Identities = 57/87 (65%), Positives = 65/87 (74%)
Frame = +3 / +3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 57 VPLSIFWQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFI 236
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 237 LTMVAYFTTRGGNPGWIPDNLNEGHLD 317
>gb|CN127274.1|CN127274 RHOH1_22_B10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_B10_A002 3', mRNA sequence
Length = 738
Score = 145 bits (311), Expect = 6e-034
Identities = 57/87 (65%), Positives = 65/87 (74%)
Frame = +3 / +3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 192 VPLSIFWQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFI 371
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 372 LTMVAYFTTRGGNPGWIPDNLNEGHLD 452
>gb|BG947743.1|BG947743 IP1_8_E11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 604
Score = 143 bits (306), Expect = 3e-033
Identities = 56/95 (58%), Positives = 69/95 (72%)
Frame = +3 / +1
Query: 21 GLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVAL 200
GL E VP+SI WQIPQYF++G AEVFT +GQ+EFFYD+APDAMRS+CSA +L TV+L
Sbjct: 151 GLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDEAPDAMRSLCSAFALITVSL 330
Query: 201 GNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
G+Y+S + G GWIP+NLN GHLD
Sbjct: 331 GSYISSIILTLVSCITTQGGDPGWIPDNLNEGHLD 435
Score = 85.4 bits (180), Expect(2) = 3e-025
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = -1 / -3
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSSPYR 23
PS TV+S +A H LLMASGA S*KNS+ P +VNTSA P KYCGICQ+M +GT + S R
Sbjct: 332 PSETVISANALHKLLMASGASS*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*IR 153
Query: 22 P 20
P
Sbjct: 152 P 150
Score = 50.6 bits (104), Expect(2) = 3e-025
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 388 FLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
FLYLY A * K +L A +QK SRWP R SGIHP P
Sbjct: 518 FLYLYLTAQPM*TIKFTKLIPAINQKNRSRWPSFRLSGIHPGSP 387
>gb|CF485548.1|CF485548 POL1_32_E07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_E07_A002 3', mRNA sequence
Length = 555
Score = 143 bits (306), Expect = 3e-033
Identities = 56/95 (58%), Positives = 69/95 (72%)
Frame = +3 / +1
Query: 21 GLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVAL 200
GL E VP+SI WQIPQYF++G AEVFT +GQ+EFFYD+APDAMRS+CSA +L TV+L
Sbjct: 145 GLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDEAPDAMRSLCSAFALITVSL 324
Query: 201 GNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
G+Y+S + G GWIP+NLN GHLD
Sbjct: 325 GSYISSIILTLVSCITTQGGDPGWIPDNLNEGHLD 429
Score = 85.4 bits (180), Expect(2) = 3e-025
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = -1 / -2
Query: 202 PSATVVSDSAEHMLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSSPYR 23
PS TV+S +A H LLMASGA S*KNS+ P +VNTSA P KYCGICQ+M +GT + S R
Sbjct: 326 PSETVISANALHKLLMASGASS*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*IR 147
Query: 22 P 20
P
Sbjct: 146 P 144
Score = 50.6 bits (104), Expect(2) = 3e-025
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -1 / -2
Query: 388 FLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
FLYLY A * K +L A +QK SRWP R SGIHP P
Sbjct: 512 FLYLYLTAQPM*TIKFTKLIPAINQKNRSRWPSFRLSGIHPGSP 381
>gb|CW349825.1|CW349825 fsbb001f010n13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f010n13, DNA
sequence
Length = 766
Score = 137 bits (294), Expect = 1e-031
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = +3 / -3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQ PQY ++G EVFT +GQ EFFY+Q+PDAMRS+CSA +L TV+LG+YLS
Sbjct: 308 VPMSILWQAPQYLLVGVGEVFTSIGQAEFFYNQSPDAMRSLCSAFALVTVSLGSYLSSFI 129
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R+G++GWIP+NLN GHLD
Sbjct: 128 LTLVSYFTTRNGQLGWIPDNLNEGHLD 48
>gb|BI139654.1|BI139654 IP1_47_D08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 536
Score = 137 bits (294), Expect = 1e-031
Identities = 54/83 (65%), Positives = 61/83 (73%)
Frame = +3 / +1
Query: 57 ICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXX 236
I WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 1 IFWQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFILTMV 180
Query: 237 XXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 181 AYFTTRGGNPGWIPDNLNEGHLD 249
>gb|CX617676.1|CX617676 GABR1_35_D02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_35_D02_A002 3', mRNA sequence
Length = 759
Score = 137 bits (294), Expect = 1e-031
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = +3 / +1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQ PQY ++G EVFT +GQ EFFY+Q+PDAMRS+CSA +L TV+LG+YLS
Sbjct: 217 VPMSILWQAPQYLLVGVGEVFTSIGQAEFFYNQSPDAMRSLCSAFALVTVSLGSYLSSFI 396
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R+G++GWIP+NLN GHLD
Sbjct: 397 LTLVSYFTTRNGQLGWIPDNLNEGHLD 477
>gb|BM328221.1|BM328221 PIC1_22_E06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 560
Score = 136 bits (292), Expect = 3e-031
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +3 / +3
Query: 63 WQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXXXX 242
WQIPQYF+IG AE+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS
Sbjct: 6 WQIPQYFLIGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFILTMVAY 185
Query: 243 XXXRHGRIGWIPENLNRGHLD 305
R G GWIP+NLN GHLD
Sbjct: 186 FTTRGGNPGWIPDNLNEGHLD 248
>gb|BG049572.1|BG049572 EM1_6_A04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 444
Score = 117 bits (250), Expect(4) = 5e-031
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -1 / -1
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRLSTASSQKK*SRWPRLRFSGIHPM P
Sbjct: 192 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLSTASSQKK*SRWPRLRFSGIHPMLP 25
Score = 51.9 bits (107), Expect(5) = 5e-021
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 347 PCLPRHRQLVQVQEDGR*LPWRQRGA 424
P LPRHR LVQVQEDGR* P RQRGA
Sbjct: 115 PGLPRHRHLVQVQEDGR*YPGRQRGA 192
Score = 46.0 bits (94), Expect(5) = 5e-021
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 252 RHGRIGWIPENLNRGHLD 305
R+G IGWIPENLNRGHLD
Sbjct: 20 RNGNIGWIPENLNRGHLD 73
Score = 25.4 bits (49), Expect(5) = 5e-021
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 421 STVQSTDGRDGGNGVISMCG 480
S + + RDG N VIS+CG
Sbjct: 229 SMMADSVNRDGENEVISLCG 288
Score = 25.4 bits (49), Expect(4) = 5e-031
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 481 NHT*KSLHFRHLAHQCSVPC 422
+H KSLHFRHL C
Sbjct: 289 DHREKSLHFRHLGSLSRPSC 230
Score = 24.9 bits (48), Expect(4) = 5e-031
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 598 NT*HVNNQFAP 566
NT*H+NN FAP
Sbjct: 390 NT*HLNNGFAP 358
Score = 24.0 bits (46), Expect(5) = 5e-021
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 479 VSCLPVCRLVLPQFGCLN 532
+S + CR VLP+ CLN
Sbjct: 278 LSVVVSCRFVLPESVCLN 331
Score = 23.5 bits (45), Expect(5) = 5e-021
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 567 GANWLFTCHVFI 602
GAN LF CHV +
Sbjct: 359 GANPLFRCHVLV 394
Score = 22.6 bits (43), Expect(4) = 5e-031
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 533 RLSTQTVAKQ 504
RLSTQT+AKQ
Sbjct: 332 RLSTQTLAKQ 303
>gb|CW172616.1|CW172616 104_583_11156384_148_36539_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156384, DNA
sequence
Length = 576
Score = 127 bits (273), Expect = 1e-028
Identities = 50/87 (57%), Positives = 62/87 (71%)
Frame = +3 / +1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQ+PQYF++G + VF VGQ EFFY++AP +MRS+CSAL L TVALG+YLS
Sbjct: 253 VPMSILWQVPQYFLVGASVVFACVGQTEFFYNEAPASMRSLCSALGLLTVALGSYLSSLV 432
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP++LN GHLD
Sbjct: 433 VTAVAWLTTRGGEPGWIPDDLNDGHLD 513
>gb|CW220298.1|CW220298 104_654_11197276_148_37151_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197276, DNA
sequence
Length = 687
Score = 127 bits (273), Expect = 1e-028
Identities = 50/87 (57%), Positives = 62/87 (71%)
Frame = +3 / -3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
VP+SI WQ+PQYF++G + VF VGQ EFFY++AP +MRS+CSAL L TVALG+YLS
Sbjct: 481 VPMSILWQVPQYFLVGASVVFACVGQTEFFYNEAPASMRSLCSALGLLTVALGSYLSSLV 302
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
R G GWIP++LN GHLD
Sbjct: 301 VTAVAWLTTRGGEPGWIPDDLNDGHLD 221
>gb|CW375588.1|CW375588 fsbb001f053a12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f053a12, DNA
sequence
Length = 396
Score = 123 bits (264), Expect = 2e-027
Identities = 49/54 (90%), Positives = 50/54 (92%)
Frame = -1 / +1
Query: 166 MLLMASGAWS*KNSSCPTKVNTSAHPMMKYCGICQQMEMGTMSSSPYRPCRAMA 5
MLLMASGAWS KNSSCPTKVNTSAHPMMKYCGICQ+MEMGT SS PYRPCRA A
Sbjct: 1 MLLMASGAWSYKNSSCPTKVNTSAHPMMKYCGICQKMEMGTWSSLPYRPCRATA 162
Score = 121 bits (259), Expect = 9e-027
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3 / -2
Query: 6 AIARHGLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRS 164
A+ARHGLYG+DD VPISI WQIPQYFIIGCAEVFTFVGQLEF YDQAPDAMRS
Sbjct: 161 AVARHGLYGKDDHVPISIFWQIPQYFIIGCAEVFTFVGQLEFLYDQAPDAMRS 3
Score = 117 bits (251), Expect = 1e-025
Identities = 49/53 (92%), Positives = 49/53 (92%)
Frame = -3 / +3
Query: 164 APHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPADGDGHDVVLAVQAVPRDG 6
APHGVGRLVV ELQLPHEGEHLRAPDDEVLRYLP DGDGH VVLAVQAVPR G
Sbjct: 3 APHGVGRLVV*ELQLPHEGEHLRAPDDEVLRYLPEDGDGHVVVLAVQAVPRHG 161
>gb|BM327663.1|BM327663 PIC1_8_G09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 398
Score = 123 bits (263), Expect = 3e-027
Identities = 47/79 (59%), Positives = 59/79 (74%)
Frame = +3 / +2
Query: 69 IPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXXXXXX 248
IPQYF++G AEVFT +GQ+EFFYD+APDAMRS+CSA +L TV+LG+Y+S
Sbjct: 2 IPQYFLVGAAEVFTCIGQVEFFYDEAPDAMRSLCSAFALITVSLGSYISSIILTLVSCIT 181
Query: 249 XRHGRIGWIPENLNRGHLD 305
+ G GWIP+NLN GHLD
Sbjct: 182 TQGGDPGWIPDNLNEGHLD 238
>gb|BE364705.2|BE364705 PI1_14_A03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 364
Score = 111 bits (237), Expect(3) = 3e-027
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = -1 / -1
Query: 424 CSPLAPG*SSAVFLYLYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMRP 257
CSPLA G SSAVFLYLYQ+AMTR* RKLRRLSTASSQKK*SR PRLRFSGIHPM P
Sbjct: 187 CSPLASGISSAVFLYLYQVAMTR*TRKLRRLSTASSQKK*SRGPRLRFSGIHPMLP 20
Score = 25.4 bits (49), Expect(3) = 3e-027
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 481 NHT*KSLHFRHLAHQCSVPC 422
+H KSLHFRHL C
Sbjct: 284 DHREKSLHFRHLGSLSRPSC 225
Score = 22.6 bits (43), Expect(3) = 3e-027
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 533 RLSTQTVAKQ 504
RLSTQT+AKQ
Sbjct: 327 RLSTQTLAKQ 298
>gb|BE359249.1|BE359249 DG1_39_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 680
Score = 120 bits (257), Expect = 2e-026
Identities = 48/101 (47%), Positives = 61/101 (60%)
Frame = +3 / +1
Query: 3 RAIARHGLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALS 182
+ + GL VP++I WQ PQYF +G A+VFT VG +EF Y+Q+PDAMRS+C A S
Sbjct: 139 KIVDERGLVHRSTAVPMNILWQAPQYFFVGVAKVFTVVGFIEFAYEQSPDAMRSLCQACS 318
Query: 183 LTTVALGNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
L + LG+YL GR GWIP+NLN G LD
Sbjct: 319 LIMITLGSYLVSVMLKFMDSATVGRGRQGWIPDNLNEGRLD 441
>gb|CW292536.1|CW292536 104_772_11414140_148_35584_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414140, DNA
sequence
Length = 688
Score = 115 bits (246), Expect = 6e-025
Identities = 47/110 (42%), Positives = 60/110 (54%)
Frame = +3 / +3
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+S+ WQ+PQY +IG +EVF +VGQLEFF QAPD ++S SAL + +++LGNY+S
Sbjct: 285 LSVLWQVPQYALIGASEVFMYVGQLEFFNGQAPDGVKSFGSALCMASISLGNYVSIMLVS 464
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLDXXXXXXXXXXXXXXXXXXXIASWYK 380
R GWIP NLN GHLD A WYK
Sbjct: 465 VVTSLTAGEKRPGWIPGNLNSGHLDRFYFLLAALSLVDLAVYIACAMWYK 614
Score = 82.2 bits (173), Expect(2) = 1e-020
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -3 / -3
Query: 227 HQDRAEVVAERDGGERQRGAHAPHGVGRLVVEELQLPHEGEHLRAPDDEVLRYLPADGDG 48
HQ A VV +RDG QR A A VGRL VEELQLPH EHLR PD VLR+LP G
Sbjct: 461 HQHDAHVVPQRDGRHAQRAAEALDAVGRLPVEELQLPHVHEHLRRPDQRVLRHLPQHAQG 282
Query: 47 HDVVLAVQAV 18
+V A+
Sbjct: 281 ARLVRGCHAL 252
Score = 38.6 bits (78), Expect(2) = 1e-020
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1 / -1
Query: 379 LYQLAMTR*ARKLRRLSTASSQKK*SRWPRLRFSGIHPMR 260
LY +A * + S A + SRWP LRF GIHP R
Sbjct: 613 LYHMAQAM*TARSTSESAARRK*NLSRWPELRFPGIHPGR 494
>gb|CW292535.1|CW292535 104_772_11414140_116_35580_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414140, DNA
sequence
Length = 672
Score = 114 bits (244), Expect = 1e-024
Identities = 47/109 (43%), Positives = 59/109 (54%)
Frame = +3 / -2
Query: 54 SICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXX 233
S+ WQ+PQY +IG +EVF +VGQLEFF QAPD ++S SAL + +++LGNY+S
Sbjct: 671 SVLWQVPQYALIGASEVFMYVGQLEFFNGQAPDGVKSFGSALCMASISLGNYVSIMLVSV 492
Query: 234 XXXXXXRHGRIGWIPENLNRGHLDXXXXXXXXXXXXXXXXXXXIASWYK 380
R GWIP NLN GHLD A WYK
Sbjct: 491 VTSLTAGEKRPGWIPGNLNSGHLDRFYFLLAALSLVDLAVYIACAMWYK 345
>gb|CW131072.1|CW131072 104_513_11115469_148_34776_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115469, DNA
sequence
Length = 629
Score = 112 bits (239), Expect = 5e-024
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +3 / -1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLS 215
VP+SI WQIPQYF+IG AEVFTF+G LEFFY+Q+PDAMRS+CSAL+L TV+ GNYL+
Sbjct: 188 VPLSIFWQIPQYFLIGLAEVFTFIGALEFFYNQSPDAMRSVCSALNLLTVSFGNYLN 18
>gb|CW402058.1|CW402058 fsbb001f093c24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f093c24, DNA
sequence
Length = 693
Score = 111 bits (238), Expect = 7e-024
Identities = 43/92 (46%), Positives = 57/92 (61%)
Frame = +3 / -1
Query: 30 GEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNY 209
G++ VP+SI WQ P +F+ G AE+F +G EFFYDQAP M+S+C+A +A G+Y
Sbjct: 297 GQEVPVPMSILWQGPVFFVHGAAEMFGSIGMTEFFYDQAPVTMKSLCAAFGQLAIASGSY 118
Query: 210 LSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
L+ R G GWIP+NLN GHLD
Sbjct: 117 LNTAVLSVVAFGTTRGGETGWIPDNLNEGHLD 22
>gb|CL158677.1|CL158677 104_347_10803702_116_31378_294 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803702, DNA
sequence
Length = 721
Score = 109 bits (233), Expect = 3e-023
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +3 / -2
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+SI WQ P + ++G EVFT +G LEFFYDQ+PD M+S+ +AL+ A GNY +
Sbjct: 483 MSIMWQAPAFAVLGVGEVFTAIGALEFFYDQSPDGMKSLGTALAQLATAAGNYFNSAVLA 304
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
R+G+ GWIP++LN+GHLD
Sbjct: 303 AVAAVTTRNGKPGWIPDDLNKGHLD 229
>gb|CW212826.1|CW212826 104_644_11191229_148_37031_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191229, DNA
sequence
Length = 633
Score = 109 bits (233), Expect = 3e-023
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +3 / -1
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+SI WQ P + ++G EVFT +G LEFFYDQ+PD M+S+ +AL+ A GNY +
Sbjct: 483 MSIMWQAPAFAVLGVGEVFTAIGALEFFYDQSPDGMKSLGTALAQLATAAGNYFNSAVLA 304
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
R+G+ GWIP++LN+GHLD
Sbjct: 303 AVAAVTTRNGKPGWIPDDLNKGHLD 229
>gb|BG239921.1|BG239921 OV1_30_G05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 357
Score = 109 bits (232), Expect = 5e-023
Identities = 43/69 (62%), Positives = 49/69 (71%)
Frame = +3 / +2
Query: 99 EVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXXXXXXXXXRHGRIGWIP 278
E+FTF+G LEFFYDQ+PDAMRS+CSAL+L T A GNYLS R G GWIP
Sbjct: 5 EIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFILTMVAYFTTRGGNPGWIP 184
Query: 279 ENLNRGHLD 305
+NLN GHLD
Sbjct: 185 DNLNEGHLD 211
>gb|CW443161.1|CW443161 fsbb001f163c01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f163c01, DNA
sequence
Length = 388
Score = 108 bits (231), Expect(2) = 5e-023
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +3 / +3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYL 212
+P+SI WQ+PQY ++G +EVFTF+GQ+EFFYDQAPDAMRS+CS L +T+ ALGNY+
Sbjct: 219 LPLSIFWQVPQYVVVGASEVFTFIGQMEFFYDQAPDAMRSLCSGLCMTSFALGNYV 386
Score = 19.4 bits (36), Expect(2) = 5e-023
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 9 IARHGLY 29
IARHG+Y
Sbjct: 159 IARHGMY 179
>gb|BF585847.1|BF585847 FM1_25_C03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 627
Score = 107 bits (229), Expect = 1e-022
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +3 / +2
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+SI WQ P + ++G EVF +G LEFFYDQ+P+ M+S+ +AL+ VA+GNY +
Sbjct: 149 MSIMWQAPAFAVLGAGEVFAAIGILEFFYDQSPEGMKSLGTALAQLAVAVGNYFNSAVLA 328
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
R+G+ GWIP++LN+GHLD
Sbjct: 329 AVAAVTTRNGKQGWIPDDLNKGHLD 403
>gb|CL190191.1|CL190191 104_408_10905918_116_32504_029 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905918, DNA
sequence
Length = 687
Score = 106 bits (227), Expect = 2e-022
Identities = 41/95 (43%), Positives = 58/95 (61%)
Frame = +3 / -1
Query: 21 GLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVAL 200
G+ D VP+SI WQ+P + + G A+VF VG EFFYDQ+P+ M+S+C+AL +A
Sbjct: 678 GMRDPDAPVPMSILWQVPLHVVHGAAQVFAGVGATEFFYDQSPETMKSLCAALGQLALAF 499
Query: 201 GNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
+Y++ R GWIP+NLN+GHLD
Sbjct: 498 ASYMNSLLLSIVAVATTRR*APGWIPDNLNQGHLD 394
>gb|CW177386.1|CW177386 104_590_11158996_148_36592_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158996, DNA
sequence
Length = 647
Score = 106 bits (227), Expect = 2e-022
Identities = 39/91 (42%), Positives = 58/91 (63%)
Frame = +3 / -3
Query: 33 EDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYL 212
+D P+S+ WQ PQY +IG +EVF ++GQL+FF +Q PD+M+ S+L + +++LGNY
Sbjct: 465 KDQPSPMSVLWQAPQYMLIGASEVFMYIGQLDFFNEQTPDSMKCFGSSLCMASISLGNYA 286
Query: 213 SXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
S R + GWI +NLN GHL+
Sbjct: 285 SMLMVSAVTSITNRQNKNGWITKNLNYGHLE 193
>gb|CW255369.1|CW255369 104_720_11226198_116_35131_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226198, DNA
sequence
Length = 720
Score = 106 bits (227), Expect = 2e-022
Identities = 41/95 (43%), Positives = 58/95 (61%)
Frame = +3 / -3
Query: 21 GLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVAL 200
G+ D VP+SI WQ+P + + G A+VF VG EFFYDQ+P+ M+S+C+AL +A
Sbjct: 367 GMRDPDAPVPMSILWQVPLHVVHGAAQVFAGVGATEFFYDQSPETMKSLCAALGQLALAF 188
Query: 201 GNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
+Y++ R GWIP+NLN+GHLD
Sbjct: 187 ASYMNSLLLSIVAVATTRR*APGWIPDNLNQGHLD 83
>gb|CW297785.1|CW297785 104_780_11462225_148_35650_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462225, DNA
sequence
Length = 569
Score = 106 bits (227), Expect = 2e-022
Identities = 41/95 (43%), Positives = 58/95 (61%)
Frame = +3 / -1
Query: 21 GLYGEDDIVPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVAL 200
G+ D VP+SI WQ+P + + G A+VF VG EFFYDQ+P+ M+S+C+AL +A
Sbjct: 365 GMRDPDAPVPMSILWQVPLHVVHGAAQVFAGVGATEFFYDQSPETMKSLCAALGQLALAF 186
Query: 201 GNYLSXXXXXXXXXXXXRHGRIGWIPENLNRGHLD 305
+Y++ R GWIP+NLN+GHLD
Sbjct: 185 ASYMNSLLLSIVAVATTRR*APGWIPDNLNQGHLD 81
>gb|CN139765.1|CN139765 OX1_24_B04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B04_A002 3', mRNA sequence
Length = 706
Score = 106 bits (226), Expect = 3e-022
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +3 / +1
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+SI WQ P + ++G EVFT +G LEFFYDQ+PD M+S+ +AL+ +A GN L+
Sbjct: 184 MSIMWQAPAFAVLGAGEVFTAIGILEFFYDQSPDGMKSLGTALAQLAIAAGNCLNSAMIA 363
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
R+G GWIP++LN GHLD
Sbjct: 364 AVAAVTTRNGEPGWIPDDLNNGHLD 438
>gb|CW158061.1|CW158061 104_561_11147854_148_36393_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147854, DNA
sequence
Length = 743
Score = 105 bits (224), Expect = 6e-022
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = +3 / -1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
V ++I WQ PQY G A+VF+ VG +EF Y+Q+PDAMRS+C A SL V LG+YL
Sbjct: 590 VLMNILWQAPQYMFAGVAKVFSVVGFIEFAYEQSPDAMRSLCQACSLLMVTLGSYLVSIM 411
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
G GWIPENLN G LD
Sbjct: 410 LKMIDSVTAGRGSHGWIPENLNEGRLD 330
>gb|CW176561.1|CW176561 104_589_11158552_148_36588_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158552, DNA
sequence
Length = 671
Score = 105 bits (224), Expect = 6e-022
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = +3 / -3
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
V ++I WQ PQY G A+VF+ VG +EF Y+Q+PDAMRS+C A SL V LG+YL
Sbjct: 516 VLMNILWQAPQYMFAGVAKVFSVVGFIEFAYEQSPDAMRSLCQACSLLMVTLGSYLVSIM 337
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
G GWIPENLN G LD
Sbjct: 336 LKMIDSVTAGRGSHGWIPENLNEGRLD 256
>gb|BI099266.1|BI099266 IP1_40_G03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 638
Score = 105 bits (224), Expect = 6e-022
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = +3 / +1
Query: 45 VPISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXX 224
V ++I WQ PQY G A+VF+ VG +EF Y+Q+PDAMRS+C A SL V LG+YL
Sbjct: 175 VLMNILWQAPQYMFAGVAKVFSVVGFIEFAYEQSPDAMRSLCQACSLLMVTLGSYLVSIM 354
Query: 225 XXXXXXXXXRHGRIGWIPENLNRGHLD 305
G GWIPENLN G LD
Sbjct: 355 LKMIDSVTAGRGSHGWIPENLNEGRLD 435
>gb|CL167649.1|CL167649 104_364_10810226_114_31802_290 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810226, DNA
sequence
Length = 557
Score = 105 bits (223), Expect = 8e-022
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +3 / -2
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+ I WQ+PQY +IG +EV +VGQLEFF Q PD ++S SAL + +++LGNY S
Sbjct: 358 LHIMWQVPQYALIGVSEVMMYVGQLEFFNGQMPDGLKSFGSALCMMSMSLGNYFSDVIVS 179
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
GR GWIP +LN GHLD
Sbjct: 178 AVTRLTTTRGRSGWIPADLNEGHLD 104
>gb|CW155360.1|CW155360 104_557_11146098_116_36358_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146098, DNA
sequence
Length = 683
Score = 105 bits (223), Expect = 8e-022
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +3 / -3
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+ I WQ+PQY +IG +EV +VGQLEFF Q PD ++S SAL + +++LGNY S
Sbjct: 603 LHIMWQVPQYALIGVSEVMMYVGQLEFFNGQMPDGLKSFGSALCMMSMSLGNYFSDVIVS 424
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
GR GWIP +LN GHLD
Sbjct: 423 AVTRLTTTRGRSGWIPADLNEGHLD 349
>gb|CW155361.1|CW155361 104_557_11146098_148_36357_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146098, DNA
sequence
Length = 649
Score = 105 bits (223), Expect = 8e-022
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +3 / +3
Query: 51 ISICWQIPQYFIIGCAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSXXXXX 230
+ I WQ+PQY +IG +EV +VGQLEFF Q PD ++S SAL + +++LGNY S
Sbjct: 138 LHIMWQVPQYALIGVSEVMMYVGQLEFFNGQMPDGLKSFGSALCMMSMSLGNYFSDVIVS 317
Query: 231 XXXXXXXRHGRIGWIPENLNRGHLD 305
GR GWIP +LN GHLD
Sbjct: 318 AVTRLTTTRGRSGWIPADLNEGHLD 392
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 658,984,937
Number of Sequences: 832831
Number of extensions: 8733681
Number of successful extensions: 132219
Number of sequences better than 1.0e-020: 58
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17707683924
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)