TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3203838.2.1
(534 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD203869.1|CD203869 HS1_2_H07.b1_A012 Heat-shocked seedl... 247 7e-074
gb|CD227113.1|CD227113 CCC1_4_B10.b1_A007 Callus culture/ce... 247 1e-071
gb|CD225116.1|CD225116 CCC1_38_B06.b1_A007 Callus culture/c... 247 2e-071
gb|CW404465.1|CW404465 fsbb001f096j22f0 Sorghum methylation... 177 2e-067
gb|CW217046.1|CW217046 104_650_11195446_148_37131_093 Sorgh... 177 3e-058
gb|CW404466.1|CW404466 fsbb001f096j22k0 Sorghum methylation... 177 1e-053
gb|CW243962.1|CW243962 104_704_11220332_148_37583_070 Sorgh... 180 2e-052
gb|CN149533.1|CN149533 WOUND1_63_H02.b1_A002 Wounded leaves... 162 3e-039
gb|CF757955.1|CF757955 DSAF1_25_E02.g1_A011 Drought-stresse... 162 4e-039
gb|CW391632.1|CW391632 fsbb001f077n22k0 Sorghum methylation... 161 5e-039
gb|CF480170.1|CF480170 POL1_64_D07.b1_A002 Pollen Sorghum b... 161 5e-039
gb|CF484412.1|CF484412 POL1_25_D12.b1_A002 Pollen Sorghum b... 161 5e-039
gb|CF487816.1|CF487816 POL1_46_C06.b1_A002 Pollen Sorghum b... 161 5e-039
gb|CN147510.1|CN147510 WOUND1_50_E09.b1_A002 Wounded leaves... 161 5e-039
gb|CN148236.1|CN148236 WOUND1_55_B09.b1_A002 Wounded leaves... 161 5e-039
gb|BG052001.1|BG052001 RHIZ2_7_F11.g1_A003 Rhizome2 (RHIZ2)... 161 7e-039
gb|CW032099.1|CW032099 104_261_10501183_114_30363 Sorghum m... 160 1e-038
gb|BG048260.1|BG048260 OV1_16_A02.g1_A002 Ovary 1 (OV1) Sor... 160 2e-038
gb|CN140813.1|CN140813 OX1_47_F12.b1_A002 Oxidatively-stres... 160 2e-038
gb|CN145887.1|CN145887 WOUND1_36_A11.b1_A002 Wounded leaves... 159 4e-038
gb|CW217045.1|CW217045 104_650_11195446_116_37132_093 Sorgh... 90 2e-036
gb|CW122627.1|CW122627 104_501_11110773_116_34677_085 Sorgh... 138 4e-032
gb|CW465934.1|CW465934 fsbb001f216o21k0 Sorghum methylation... 138 4e-032
gb|CD428180.1|CD428180 ETH1_28_C02.b1_A002 Ethylene-treated... 138 4e-032
gb|CD462540.1|CD462540 ETH1_38_C08.b1_A002 Ethylene-treated... 138 4e-032
gb|CF430956.1|CF430956 NIT1_4_F06.b1_A002 Nitrogen-deficien... 138 4e-032
gb|CF431001.1|CF431001 NIT1_4_D08.b1_A002 Nitrogen-deficien... 138 4e-032
gb|CF431564.1|CF431564 NIT1_8_B02.b1_A002 Nitrogen-deficien... 138 4e-032
gb|CF432804.1|CF432804 NIT1_19_E10.b1_A002 Nitrogen-deficie... 138 4e-032
gb|CN134387.1|CN134387 OX1_26_C04.b1_A002 Oxidatively-stres... 138 4e-032
gb|CX608350.1|CX608350 ANR1_38_C09.b1_A002 Anaerobic roots ... 138 4e-032
gb|CW243961.1|CW243961 104_704_11220332_116_37584_070 Sorgh... 84 3e-031
gb|BF587706.1|BF587706 FM1_39_F09.g1_A003 Floral-Induced Me... 130 1e-029
gb|BG241324.1|BG241324 RHIZ2_49_A04.g1_A003 Rhizome2 (RHIZ2... 130 1e-029
gb|BG559907.1|BG559907 RHIZ2_75_B06.g1_A003 Rhizome2 (RHIZ2... 130 1e-029
gb|CW027561.1|CW027561 104_254_10498588_116_30396 Sorghum m... 130 2e-029
gb|CW038410.1|CW038410 104_270_10504910_115_30386 Sorghum m... 130 2e-029
gb|CN131793.1|CN131793 OX1_2_G05.b1_A002 Oxidatively-stress... 130 2e-029
gb|CN138045.1|CN138045 OX1_61_H04.b1_A002 Oxidatively-stres... 130 2e-029
gb|BG159378.1|BG159378 OV2_7_A11.g1_A002 Ovary 2 (OV2) Sorg... 128 6e-029
gb|BI075108.1|BI075108 IP1_19_G01.g1_A002 Immature pannicle... 128 6e-029
gb|BG355941.2|BG355941 EM1_18_E06.g1_A002 Embryo 1 (EM1) So... 128 6e-029
gb|CX614740.1|CX614740 GABR1_16_B02.b1_A002 GA- or brassino... 128 6e-029
gb|CX622493.1|CX622493 GABR1_64_G03.b2_A002 GA- or brassino... 128 6e-029
gb|CD229956.1|CD229956 SS1_40_H11.b1_A012 Salt-stressed see... 127 1e-028
gb|BG466123.1|BG466123 RHIZ2_48_H07.g1_A003 Rhizome2 (RHIZ2... 127 2e-028
gb|BM328692.1|BM328692 PIC1_25_D10.g1_A002 Pathogen-infecte... 127 2e-028
gb|CN143114.1|CN143114 WOUND1_14_E12.b1_A002 Wounded leaves... 127 2e-028
gb|CN148699.1|CN148699 WOUND1_58_F02.b1_A002 Wounded leaves... 127 2e-028
gb|CX622436.1|CX622436 GABR1_64_A04.b2_A002 GA- or brassino... 124 1e-027
gb|CF429876.1|CF429876 PH1_25_A07.b1_A002 Phosphorous-defic... 84 5e-027
gb|CF427705.1|CF427705 PH1_10_G01.b1_A002 Phosphorous-defic... 117 1e-025
gb|CW409779.1|CW409779 fsbb001f104d18f0 Sorghum methylation... 107 1e-022
gb|BG465898.1|BG465898 RHIZ2_46_A02.g1_A003 Rhizome2 (RHIZ2... 104 1e-021
>gb|CD203869.1|CD203869 HS1_2_H07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_H07_A012 3', mRNA sequence
Length = 627
Score = 247 bits (534), Expect = 9e-065
Identities = 110/137 (80%), Positives = 119/137 (86%)
Frame = -2 / +2
Query: 533 SSGRPGRYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD 354
+S YAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD
Sbjct: 170 ASASMSMYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD 349
Query: 353 FAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAASLGSSPVPAL*LRH 174
FAAKHGL ADIELIGTEEVNEAMERLAKGEVRYRFVID+GNTL+AASL SSPVPAL*L
Sbjct: 350 FAAKHGLVADIELIGTEEVNEAMERLAKGEVRYRFVIDVGNTLSAASLASSPVPAL*LLP 529
Query: 173 LFLLGSTNAHINILLFV 123
++ + HI + ++
Sbjct: 530 AWINK*SPKHIVVCRYI 580
Score = 239 bits (517), Expect(2) = 7e-074
Identities = 103/112 (91%), Positives = 108/112 (96%)
Frame = +1 / -1
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDAALRVLP SMTKRYLTSPLARRSMAS TSSVPISSMSA +PCLAAKSI
Sbjct: 522 NYRAGTGELASDAALRVLPTSMTKRYLTSPLARRSMASFTSSVPISSMSATSPCLAAKSI 343
Query: 361 ISCVSLMLPMQLPARVLPPVTKEKAEICRGFSGRPSRIILPWGLRRAR*AYL 516
ISCVSLMLP+QLPARVLPPVTKEKAEICRGFSGRPS+IILPWGLRRAR*AY+
Sbjct: 342 ISCVSLMLPIQLPARVLPPVTKEKAEICRGFSGRPSKIILPWGLRRAR*AYM 187
Score = 211 bits (456), Expect(2) = 1e-063
Identities = 88/113 (77%), Positives = 91/113 (80%)
Frame = -1 / +1
Query: 513 VRLPCSPQAPGQDDPAWPA*EASADLCLLFGYWGQDSGRELHGEHQGHAGDDGLRSQARV 334
VRLPCSPQAPGQDD AWPA*EASADLCLLFGYW QDSGREL+GEHQGHAGDDGLRSQA
Sbjct: 190 VRLPCSPQAPGQDDLAWPA*EASADLCLLFGYWWQDSGRELYGEHQGHAGDDGLRSQAWA 369
Query: 333 DSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXXXXXRGITRELAGPSSVAAT 175
GHR DRHRRS *GHG PRQGRGQVPL RG+T EL GPSSV +
Sbjct: 370 GGGHRADRHRRSK*GHGAPRQGRGQVPLRHRRRQHPQRGVTSELTGPSSVVTS 528
Score = 192 bits (413), Expect(2) = 1e-058
Identities = 87/114 (76%), Positives = 88/114 (77%)
Frame = +3 / -3
Query: 183 LQSWDRRAP**CRXXXXXXXXXXXXXXLALGEAFHGLINFFGADQFDVRCQPVLGCEVHH 362
LQSWDR A ** R LALGEA HGLI FFGADQ DVR QP+LGCEVHH
Sbjct: 520 LQSWDR*AR**RRAEGVADVDDEAVPDLALGEALHGLIYFFGADQLDVRHQPMLGCEVHH 341
Query: 363 LLRVPDAPHAAPGQSLAPSNQREGRDLQRLLRQAKQDHLALGLEESKVSVPARA 524
LLRVPDAPH APGQSLA SNQREGRDLQRLLRQAKQDHLALGLEESKVSV A
Sbjct: 340 LLRVPDAPHTAPGQSLATSNQREGRDLQRLLRQAKQDHLALGLEESKVSVHGHA 179
Score = 107 bits (228), Expect(2) = 3e-031
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / +3
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 291 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 470
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 471 TPSARRH*RAHRSQLCS 521
Score = 58.8 bits (122), Expect(2) = 7e-074
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / -3
Query: 79 VPFYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
+PFYSKYT L+HDIST++NMF +FVDPSR +S+
Sbjct: 616 LPFYSKYTSLTHDISTHDNMFRRSFVDPSRK*LQSW 509
Score = 55.6 bits (115), Expect(2) = 1e-058
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2 / -1
Query: 80 FLFILNILAYRTIYRQTTICLCEHLLIQAGTSVAA 184
FLFI NIL TIYR TTICL +HLLIQAG++ A
Sbjct: 615 FLFIQNILHLHTIYRHTTICLGDHLLIQAGSNYRA 511
Score = 52.4 bits (108), Expect(2) = 1e-063
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -3 / +1
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKEL 77
SCLDQQM+ *TYC +SIYR KYI NKKE+
Sbjct: 526 SCLDQQMIA*TYCRVSIYRV*VKYILNKKEV 618
Score = 48.7 bits (100), Expect(2) = 3e-031
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -2 / +3
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*KGT 78
FLLGSTN +NIL VDISC +VY E*KG+
Sbjct: 525 FLLGSTNDRLNILSCVDISCVSEVYFE*KGS 617
>gb|CD227113.1|CD227113 CCC1_4_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_4_B10_A007 3', mRNA sequence
Length = 647
Score = 247 bits (534), Expect = 9e-065
Identities = 110/137 (80%), Positives = 119/137 (86%)
Frame = -2 / +2
Query: 533 SSGRPGRYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD 354
+S YAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD
Sbjct: 191 ASASMSMYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD 370
Query: 353 FAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAASLGSSPVPAL*LRH 174
FAAKHGL ADIELIGTEEVNEAMERLAKGEVRYRFVID+GNTL+AASL SSPVPAL*L
Sbjct: 371 FAAKHGLVADIELIGTEEVNEAMERLAKGEVRYRFVIDVGNTLSAASLASSPVPAL*LLP 550
Query: 173 LFLLGSTNAHINILLFV 123
++ + HI + ++
Sbjct: 551 AWINK*SPKHIVVCRYI 601
Score = 239 bits (517), Expect(2) = 1e-071
Identities = 103/112 (91%), Positives = 108/112 (96%)
Frame = +1 / -3
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDAALRVLP SMTKRYLTSPLARRSMAS TSSVPISSMSA +PCLAAKSI
Sbjct: 543 NYRAGTGELASDAALRVLPTSMTKRYLTSPLARRSMASFTSSVPISSMSATSPCLAAKSI 364
Query: 361 ISCVSLMLPMQLPARVLPPVTKEKAEICRGFSGRPSRIILPWGLRRAR*AYL 516
ISCVSLMLP+QLPARVLPPVTKEKAEICRGFSGRPS+IILPWGLRRAR*AY+
Sbjct: 363 ISCVSLMLPIQLPARVLPPVTKEKAEICRGFSGRPSKIILPWGLRRAR*AYM 208
Score = 211 bits (456), Expect(2) = 1e-062
Identities = 88/113 (77%), Positives = 91/113 (80%)
Frame = -1 / +1
Query: 513 VRLPCSPQAPGQDDPAWPA*EASADLCLLFGYWGQDSGRELHGEHQGHAGDDGLRSQARV 334
VRLPCSPQAPGQDD AWPA*EASADLCLLFGYW QDSGREL+GEHQGHAGDDGLRSQA
Sbjct: 211 VRLPCSPQAPGQDDLAWPA*EASADLCLLFGYWWQDSGRELYGEHQGHAGDDGLRSQAWA 390
Query: 333 DSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXXXXXRGITRELAGPSSVAAT 175
GHR DRHRRS *GHG PRQGRGQVPL RG+T EL GPSSV +
Sbjct: 391 GGGHRADRHRRSK*GHGAPRQGRGQVPLRHRRRQHPQRGVTSELTGPSSVVTS 549
Score = 192 bits (413), Expect(2) = 3e-057
Identities = 87/114 (76%), Positives = 88/114 (77%)
Frame = +3 / -2
Query: 183 LQSWDRRAP**CRXXXXXXXXXXXXXXLALGEAFHGLINFFGADQFDVRCQPVLGCEVHH 362
LQSWDR A ** R LALGEA HGLI FFGADQ DVR QP+LGCEVHH
Sbjct: 541 LQSWDR*AR**RRAEGVADVDDEAVPDLALGEALHGLIYFFGADQLDVRHQPMLGCEVHH 362
Query: 363 LLRVPDAPHAAPGQSLAPSNQREGRDLQRLLRQAKQDHLALGLEESKVSVPARA 524
LLRVPDAPH APGQSLA SNQREGRDLQRLLRQAKQDHLALGLEESKVSV A
Sbjct: 361 LLRVPDAPHTAPGQSLATSNQREGRDLQRLLRQAKQDHLALGLEESKVSVHGHA 200
Score = 107 bits (228), Expect(2) = 1e-030
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / +3
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 312 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 491
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 492 TPSARRH*RAHRSQLCS 542
Score = 51.5 bits (106), Expect(2) = 1e-071
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2 / -3
Query: 74 IEFLFILNILAYRTIYRQTTICLCEHLLIQAGTSVAA 184
IE F NIL TIYR TTICL +HLLIQAG++ A
Sbjct: 642 IELPFYSNILHLHTIYRHTTICLGDHLLIQAGSNYRA 532
Score = 51.0 bits (105), Expect(2) = 3e-057
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1 / -2
Query: 85 FYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
F KYT L+HDIST++NMF *+FVDPSR +S+
Sbjct: 631 FLFKYTSLTHDISTHDNMFR*SFVDPSRK*LQSW 530
Score = 49.2 bits (101), Expect(2) = 1e-062
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -3 / +1
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKE 80
SCLDQQM+T*TYC +SIYR KYI* K++
Sbjct: 547 SCLDQQMIT*TYCRVSIYRV*VKYI*IKRK 636
Score = 46.4 bits (95), Expect(2) = 1e-030
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -2 / +3
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*K 84
FLLGSTN H+NIL VDISC +VYL K
Sbjct: 546 FLLGSTNDHLNILSCVDISCVSEVYLNKK 632
>gb|CD225116.1|CD225116 CCC1_38_B06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_B06_A007 3', mRNA sequence
Length = 630
Score = 247 bits (534), Expect = 9e-065
Identities = 110/137 (80%), Positives = 119/137 (86%)
Frame = -2 / +1
Query: 533 SSGRPGRYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD 354
+S YAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD
Sbjct: 181 ASASMSMYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMD 360
Query: 353 FAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAASLGSSPVPAL*LRH 174
FAAKHGL ADIELIGTEEVNEAMERLAKGEVRYRFVID+GNTL+AASL SSPVPAL*L
Sbjct: 361 FAAKHGLVADIELIGTEEVNEAMERLAKGEVRYRFVIDVGNTLSAASLASSPVPAL*LLP 540
Query: 173 LFLLGSTNAHINILLFV 123
++ + HI + ++
Sbjct: 541 AWINK*SPKHIVVCRYI 591
Score = 239 bits (517), Expect(2) = 2e-071
Identities = 103/112 (91%), Positives = 108/112 (96%)
Frame = +1 / -2
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDAALRVLP SMTKRYLTSPLARRSMAS TSSVPISSMSA +PCLAAKSI
Sbjct: 533 NYRAGTGELASDAALRVLPTSMTKRYLTSPLARRSMASFTSSVPISSMSATSPCLAAKSI 354
Query: 361 ISCVSLMLPMQLPARVLPPVTKEKAEICRGFSGRPSRIILPWGLRRAR*AYL 516
ISCVSLMLP+QLPARVLPPVTKEKAEICRGFSGRPS+IILPWGLRRAR*AY+
Sbjct: 353 ISCVSLMLPIQLPARVLPPVTKEKAEICRGFSGRPSKIILPWGLRRAR*AYM 198
Score = 211 bits (456), Expect(2) = 1e-062
Identities = 88/113 (77%), Positives = 91/113 (80%)
Frame = -1 / +3
Query: 513 VRLPCSPQAPGQDDPAWPA*EASADLCLLFGYWGQDSGRELHGEHQGHAGDDGLRSQARV 334
VRLPCSPQAPGQDD AWPA*EASADLCLLFGYW QDSGREL+GEHQGHAGDDGLRSQA
Sbjct: 201 VRLPCSPQAPGQDDLAWPA*EASADLCLLFGYWWQDSGRELYGEHQGHAGDDGLRSQAWA 380
Query: 333 DSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXXXXXRGITRELAGPSSVAAT 175
GHR DRHRRS *GHG PRQGRGQVPL RG+T EL GPSSV +
Sbjct: 381 GGGHRADRHRRSK*GHGAPRQGRGQVPLRHRRRQHPQRGVTSELTGPSSVVTS 539
Score = 192 bits (413), Expect(2) = 7e-057
Identities = 87/114 (76%), Positives = 88/114 (77%)
Frame = +3 / -1
Query: 183 LQSWDRRAP**CRXXXXXXXXXXXXXXLALGEAFHGLINFFGADQFDVRCQPVLGCEVHH 362
LQSWDR A ** R LALGEA HGLI FFGADQ DVR QP+LGCEVHH
Sbjct: 531 LQSWDR*AR**RRAEGVADVDDEAVPDLALGEALHGLIYFFGADQLDVRHQPMLGCEVHH 352
Query: 363 LLRVPDAPHAAPGQSLAPSNQREGRDLQRLLRQAKQDHLALGLEESKVSVPARA 524
LLRVPDAPH APGQSLA SNQREGRDLQRLLRQAKQDHLALGLEESKVSV A
Sbjct: 351 LLRVPDAPHTAPGQSLATSNQREGRDLQRLLRQAKQDHLALGLEESKVSVHGHA 190
Score = 107 bits (228), Expect(2) = 1e-030
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / +2
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 302 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 481
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 482 TPSARRH*RAHRSQLCS 532
Score = 51.0 bits (105), Expect(2) = 2e-071
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1 / -1
Query: 85 FYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
F KYT L+HDIST++NMF *+FVDPSR +S+
Sbjct: 621 FLFKYTSLTHDISTHDNMFR*SFVDPSRK*LQSW 520
Score = 49.6 bits (102), Expect(2) = 7e-057
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +2 / -2
Query: 77 EFLFILNILAYRTIYRQTTICLCEHLLIQAGTSVAA 184
E F NIL TIYR TTICL +HLLIQAG++ A
Sbjct: 629 ELPFYSNILHLHTIYRHTTICLGDHLLIQAGSNYRA 522
Score = 49.2 bits (101), Expect(2) = 1e-062
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -3 / +3
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKE 80
SCLDQQM+T*TYC +SIYR KYI* K++
Sbjct: 537 SCLDQQMIT*TYCRVSIYRV*VKYI*IKRK 626
Score = 46.4 bits (95), Expect(2) = 1e-030
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -2 / +2
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*K 84
FLLGSTN H+NIL VDISC +VYL K
Sbjct: 536 FLLGSTNDHLNILSCVDISCVSEVYLNKK 622
>gb|CW404465.1|CW404465 fsbb001f096j22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f096j22, DNA
sequence
Length = 728
Score = 177 bits (382), Expect(3) = 9e-059
Identities = 78/102 (76%), Positives = 88/102 (86%)
Frame = -2 / +2
Query: 428 SLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRF 249
S+ TGGKTLAGSCMGSIRDTQEMMDFAAKHGL AD+ELIGTEEVNEAMERLAKGEVRYRF
Sbjct: 263 SVHTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADVELIGTEEVNEAMERLAKGEVRYRF 442
Query: 248 VIDIGNTLNAASLGSSPVPAL*LRHLFLLGSTNAHINILLFV 123
VID+GNTL+AASL SSPVPAL*L ++ + HI + ++
Sbjct: 443 VIDVGNTLSAASLASSPVPAL*LLPAWINK*SPKHIVVCRYI 568
Score = 163 bits (351), Expect(4) = 2e-067
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = +1 / -3
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDAALRVLP SMTKRYLTSPLARRSMAS TSSVPISS SA +PCLAAKSI
Sbjct: 510 NYRAGTGELASDAALRVLPTSMTKRYLTSPLARRSMASFTSSVPISSTSATSPCLAAKSI 331
Query: 361 ISCVSLMLPMQLPARVLPPV 420
ISCVSLMLP+QLPARVLPPV
Sbjct: 330 ISCVSLMLPIQLPARVLPPV 271
Score = 127 bits (273), Expect(4) = 4e-054
Identities = 55/79 (69%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 411 QDSGRELHGEHQGHAGDDGLRSQARVDSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXX 232
QDSGREL+GEHQGHAGDDGLRSQA G R DRHRRS *GHG PRQGRGQVPL
Sbjct: 280 QDSGRELYGEHQGHAGDDGLRSQAWAGGGRRADRHRRSK*GHGAPRQGRGQVPLRHRRRQ 459
Query: 231 XXXRGITRELAGPSSVAAT 175
RG+T EL GPSSV +
Sbjct: 460 HPQRGVTSELTGPSSVVTS 516
Score = 120 bits (257), Expect(4) = 5e-051
Identities = 54/77 (70%), Positives = 55/77 (71%)
Frame = +3 / -2
Query: 183 LQSWDRRAP**CRXXXXXXXXXXXXXXLALGEAFHGLINFFGADQFDVRCQPVLGCEVHH 362
LQSWDR A ** R LALGEA HGLI FFGADQ DVR QP+LGCEVHH
Sbjct: 508 LQSWDR*AR**RRAEGVADVDDEAVPDLALGEALHGLIYFFGADQLDVRHQPMLGCEVHH 329
Query: 363 LLRVPDAPHAAPGQSLA 413
LLRVPDAPH APGQSLA
Sbjct: 328 LLRVPDAPHTAPGQSLA 278
Score = 107 bits (228), Expect(2) = 2e-032
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / +3
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 279 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 458
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 459 TPSARRH*RAHRSQLCS 509
Score = 66.1 bits (138), Expect(4) = 2e-067
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1 / -1
Query: 415 PVTKEKAEICRGFSGRPSRIILPWGL 492
PVTKEKAEICRGFSGRPS+IILPWGL
Sbjct: 80 PVTKEKAEICRGFSGRPSKIILPWGL 3
Score = 65.7 bits (137), Expect(3) = 9e-059
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -1 / +3
Query: 492 QAPGQDDPAWPA*EASADLCLLFGYW 415
QAPGQDD AWPA*EASADLCLLFGYW
Sbjct: 3 QAPGQDDLAWPA*EASADLCLLFGYW 80
Score = 63.8 bits (133), Expect(4) = 4e-054
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2 / +1
Query: 494 LKPQGKMILLGLPEKPLQISAFSLVTG 414
LKPQGKMILLGLPEKPLQISAFSLVTG
Sbjct: 1 LKPQGKMILLGLPEKPLQISAFSLVTG 81
Score = 62.0 bits (129), Expect(4) = 5e-051
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3 / -3
Query: 417 SNQREGRDLQRLLRQAKQDHLALGLE 494
SNQREGRDLQRLLRQAKQDHLALGLE
Sbjct: 78 SNQREGRDLQRLLRQAKQDHLALGLE 1
Score = 61.1 bits (127), Expect(4) = 2e-067
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 79 VPFYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
+PFYSKYT L+HDIST++NMF *+FVDPSR +S+
Sbjct: 604 LPFYSKYTSLTHDISTHDNMFR*SFVDPSRK*LQSW 497
Score = 57.0 bits (118), Expect(4) = 4e-054
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +1
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKELNLNASN 59
SCLDQQM+T*TYC +SIYR KYI NKKE+ + SN
Sbjct: 514 SCLDQQMIT*TYCRVSIYRV*VKYILNKKEVLYSNSN 624
Score = 55.6 bits (115), Expect(4) = 5e-051
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2 / -3
Query: 80 FLFILNILAYRTIYRQTTICLCEHLLIQAGTSVAA 184
FLFI NIL TIYR TTICL +HLLIQAG++ A
Sbjct: 603 FLFIQNILHLHTIYRHTTICLGDHLLIQAGSNYRA 499
Score = 52.4 bits (108), Expect(2) = 2e-032
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2 / +3
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*KGT 78
FLLGSTN H+NIL VDISC +VY E*KG+
Sbjct: 513 FLLGSTNDHLNILSCVDISCVSEVYFE*KGS 605
Score = 24.9 bits (48), Expect(3) = 9e-059
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +1
Query: 76 NLNASNTVCLRSY 38
N NASNT+CL+ +
Sbjct: 616 NSNASNTICLKHH 654
Score = 24.4 bits (47), Expect(4) = 2e-067
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -3
Query: 47 KTNSITCV*I 76
KTNSITCV*I
Sbjct: 645 KTNSITCV*I 616
Score = 21.7 bits (41), Expect(4) = 4e-054
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 77 QFKRK*YCLS* 45
QFKRK*Y LS*
Sbjct: 615 QFKRK*YYLS* 647
Score = 21.7 bits (41), Expect(4) = 5e-051
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 46 *DKQYYLRLN 75
*DK YYLRLN
Sbjct: 646 *DK*YYLRLN 617
>gb|CW217046.1|CW217046 104_650_11195446_148_37131_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195446, DNA
sequence
Length = 678
Score = 177 bits (382), Expect(3) = 3e-050
Identities = 78/102 (76%), Positives = 88/102 (86%)
Frame = -2 / -2
Query: 428 SLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRF 249
S+ TGGKTLAGSCMGSIRDTQEMMDFAAKHGL AD+ELIGTEEVNEAMERLAKGEVRYRF
Sbjct: 455 SVHTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADVELIGTEEVNEAMERLAKGEVRYRF 276
Query: 248 VIDIGNTLNAASLGSSPVPAL*LRHLFLLGSTNAHINILLFV 123
VID+GNTL+AASL SSPVPAL*L ++ + HI + ++
Sbjct: 275 VIDVGNTLSAASLASSPVPAL*LLPAWINK*SPKHIVVCRYI 150
Score = 163 bits (351), Expect(4) = 3e-058
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = +1 / +1
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDAALRVLP SMTKRYLTSPLARRSMAS TSSVPISS SA +PCLAAKSI
Sbjct: 208 NYRAGTGELASDAALRVLPTSMTKRYLTSPLARRSMASFTSSVPISSTSATSPCLAAKSI 387
Query: 361 ISCVSLMLPMQLPARVLPPV 420
ISCVSLMLP+QLPARVLPPV
Sbjct: 388 ISCVSLMLPIQLPARVLPPV 447
Score = 127 bits (273), Expect(4) = 2e-045
Identities = 55/79 (69%), Positives = 58/79 (73%)
Frame = -1 / -1
Query: 411 QDSGRELHGEHQGHAGDDGLRSQARVDSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXX 232
QDSGREL+GEHQGHAGDDGLRSQA G R DRHRRS *GHG PRQGRGQVPL
Sbjct: 438 QDSGRELYGEHQGHAGDDGLRSQAWAGGGRRADRHRRSK*GHGAPRQGRGQVPLRHRRRQ 259
Query: 231 XXXRGITRELAGPSSVAAT 175
RG+T EL GPSSV +
Sbjct: 258 HPQRGVTSELTGPSSVVTS 202
Score = 120 bits (257), Expect(4) = 2e-042
Identities = 54/77 (70%), Positives = 55/77 (71%)
Frame = +3 / +3
Query: 183 LQSWDRRAP**CRXXXXXXXXXXXXXXLALGEAFHGLINFFGADQFDVRCQPVLGCEVHH 362
LQSWDR A ** R LALGEA HGLI FFGADQ DVR QP+LGCEVHH
Sbjct: 210 LQSWDR*AR**RRAEGVADVDDEAVPDLALGEALHGLIYFFGADQLDVRHQPMLGCEVHH 389
Query: 363 LLRVPDAPHAAPGQSLA 413
LLRVPDAPH APGQSLA
Sbjct: 390 LLRVPDAPHTAPGQSLA 440
Score = 107 bits (228), Expect(2) = 2e-032
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / -3
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 439 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 260
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 259 TPSARRH*RAHRSQLCS 209
Score = 61.1 bits (127), Expect(4) = 3e-058
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1 / +3
Query: 79 VPFYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
+PFYSKYT L+HDIST++NMF *+FVDPSR +S+
Sbjct: 114 LPFYSKYTSLTHDISTHDNMFR*SFVDPSRK*LQSW 221
Score = 57.0 bits (118), Expect(4) = 2e-045
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / -1
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKELNLNASN 59
SCLDQQM+T*TYC +SIYR KYI NKKE+ + SN
Sbjct: 204 SCLDQQMIT*TYCRVSIYRV*VKYILNKKEVLYSNSN 94
Score = 55.6 bits (115), Expect(4) = 2e-042
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2 / +1
Query: 80 FLFILNILAYRTIYRQTTICLCEHLLIQAGTSVAA 184
FLFI NIL TIYR TTICL +HLLIQAG++ A
Sbjct: 115 FLFIQNILHLHTIYRHTTICLGDHLLIQAGSNYRA 219
Score = 52.4 bits (108), Expect(2) = 2e-032
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2 / -3
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*KGT 78
FLLGSTN H+NIL VDISC +VY E*KG+
Sbjct: 205 FLLGSTNDHLNILSCVDISCVSEVYFE*KGS 113
Score = 36.8 bits (74), Expect(3) = 3e-050
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 453 EASADLCLLFGYW 415
EASADLCLLFGYW
Sbjct: 676 EASADLCLLFGYW 638
Score = 35.0 bits (70), Expect(4) = 3e-058
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / +2
Query: 415 PVTKEKAEICRGF 453
PVTKEKAEICRGF
Sbjct: 638 PVTKEKAEICRGF 676
Score = 33.6 bits (67), Expect(4) = 2e-045
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / -1
Query: 455 EKPLQISAFSLVTG 414
EKPLQISAFSLVTG
Sbjct: 678 EKPLQISAFSLVTG 637
Score = 32.2 bits (64), Expect(4) = 2e-042
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 417 SNQREGRDLQRLL 455
SNQREGRDLQRLL
Sbjct: 640 SNQREGRDLQRLL 678
Score = 24.9 bits (48), Expect(3) = 3e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / -1
Query: 76 NLNASNTVCLRSY 38
N NASNT+CL+ +
Sbjct: 102 NSNASNTICLKHH 64
Score = 24.4 bits (47), Expect(4) = 3e-058
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 47 KTNSITCV*I 76
KTNSITCV*I
Sbjct: 73 KTNSITCV*I 102
Score = 21.7 bits (41), Expect(4) = 2e-045
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 77 QFKRK*YCLS* 45
QFKRK*Y LS*
Sbjct: 103 QFKRK*YYLS* 71
Score = 21.7 bits (41), Expect(4) = 2e-042
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 46 *DKQYYLRLN 75
*DK YYLRLN
Sbjct: 72 *DK*YYLRLN 101
>gb|CW404466.1|CW404466 fsbb001f096j22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f096j22, DNA
sequence
Length = 708
Score = 177 bits (380), Expect(2) = 6e-045
Identities = 77/99 (77%), Positives = 86/99 (86%)
Frame = -2 / -1
Query: 419 TGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRFVID 240
TGGKTLAGSCMGSIRDTQEMMDFAAKHGL AD+ELIGTEEVNEAMERLAKGEVRYRFVID
Sbjct: 702 TGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADVELIGTEEVNEAMERLAKGEVRYRFVID 523
Query: 239 IGNTLNAASLGSSPVPAL*LRHLFLLGSTNAHINILLFV 123
+GNTL+AASL SSPVPAL*L ++ + HI + ++
Sbjct: 522 VGNTLSAASLASSPVPAL*LLPAWINK*SPKHIVVCRYI 406
Score = 163 bits (351), Expect(3) = 1e-053
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = +1 / +2
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDAALRVLP SMTKRYLTSPLARRSMAS TSSVPISS SA +PCLAAKSI
Sbjct: 464 NYRAGTGELASDAALRVLPTSMTKRYLTSPLARRSMASFTSSVPISSTSATSPCLAAKSI 643
Query: 361 ISCVSLMLPMQLPARVLPPV 420
ISCVSLMLP+QLPARVLPPV
Sbjct: 644 ISCVSLMLPIQLPARVLPPV 703
Score = 127 bits (273), Expect(3) = 2e-040
Identities = 55/79 (69%), Positives = 58/79 (73%)
Frame = -1 / -3
Query: 411 QDSGRELHGEHQGHAGDDGLRSQARVDSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXX 232
QDSGREL+GEHQGHAGDDGLRSQA G R DRHRRS *GHG PRQGRGQVPL
Sbjct: 694 QDSGRELYGEHQGHAGDDGLRSQAWAGGGRRADRHRRSK*GHGAPRQGRGQVPLRHRRRQ 515
Query: 231 XXXRGITRELAGPSSVAAT 175
RG+T EL GPSSV +
Sbjct: 514 HPQRGVTSELTGPSSVVTS 458
Score = 120 bits (257), Expect(3) = 7e-038
Identities = 54/77 (70%), Positives = 55/77 (71%)
Frame = +3 / +1
Query: 183 LQSWDRRAP**CRXXXXXXXXXXXXXXLALGEAFHGLINFFGADQFDVRCQPVLGCEVHH 362
LQSWDR A ** R LALGEA HGLI FFGADQ DVR QP+LGCEVHH
Sbjct: 466 LQSWDR*AR**RRAEGVADVDDEAVPDLALGEALHGLIYFFGADQLDVRHQPMLGCEVHH 645
Query: 363 LLRVPDAPHAAPGQSLA 413
LLRVPDAPH APGQSLA
Sbjct: 646 LLRVPDAPHTAPGQSLA 696
Score = 107 bits (228), Expect(2) = 2e-032
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / -2
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 695 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 516
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 515 TPSARRH*RAHRSQLCS 465
Score = 61.1 bits (127), Expect(3) = 1e-053
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1 / +1
Query: 79 VPFYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
+PFYSKYT L+HDIST++NMF *+FVDPSR +S+
Sbjct: 370 LPFYSKYTSLTHDISTHDNMFR*SFVDPSRK*LQSW 477
Score = 57.0 bits (118), Expect(3) = 2e-040
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / -3
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKELNLNASN 59
SCLDQQM+T*TYC +SIYR KYI NKKE+ + SN
Sbjct: 460 SCLDQQMIT*TYCRVSIYRV*VKYILNKKEVLYSNSN 350
Score = 55.6 bits (115), Expect(3) = 7e-038
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 80 FLFILNILAYRTIYRQTTICLCEHLLIQAGTSVAA 184
FLFI NIL TIYR TTICL +HLLIQAG++ A
Sbjct: 371 FLFIQNILHLHTIYRHTTICLGDHLLIQAGSNYRA 475
Score = 52.4 bits (108), Expect(2) = 2e-032
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2 / -2
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*KGT 78
FLLGSTN H+NIL VDISC +VY E*KG+
Sbjct: 461 FLLGSTNDHLNILSCVDISCVSEVYFE*KGS 369
Score = 24.9 bits (48), Expect(2) = 6e-045
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 76 NLNASNTVCLRSY 38
N NASNT+CL+ +
Sbjct: 358 NSNASNTICLKHH 320
Score = 24.4 bits (47), Expect(3) = 1e-053
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 47 KTNSITCV*I 76
KTNSITCV*I
Sbjct: 329 KTNSITCV*I 358
Score = 21.7 bits (41), Expect(3) = 2e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 77 QFKRK*YCLS* 45
QFKRK*Y LS*
Sbjct: 359 QFKRK*YYLS* 327
Score = 21.7 bits (41), Expect(3) = 7e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 46 *DKQYYLRLN 75
*DK YYLRLN
Sbjct: 328 *DK*YYLRLN 357
>gb|CW243962.1|CW243962 104_704_11220332_148_37583_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220332, DNA
sequence
Length = 603
Score = 180 bits (387), Expect(2) = 7e-046
Identities = 78/102 (76%), Positives = 88/102 (86%)
Frame = -2 / -1
Query: 428 SLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIELIGTEEVNEAMERLAKGEVRYRF 249
S+ TGGKTLAGSCMGSIRDTQEMMDFAAKHGL AD+ELIGTEEVNEAMERLAKGEVRYRF
Sbjct: 495 SVHTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADVELIGTEEVNEAMERLAKGEVRYRF 316
Query: 248 VIDIGNTLNAASLGSSPVPAL*LRHLFLLGSTNAHINILLFV 123
VID+GNTL+ ASL SSPVPAL*L H ++ + HI + ++
Sbjct: 315 VIDVGNTLSEASLASSPVPAL*LLHAWINK*SPKHIVVCRYI 190
Score = 162 bits (348), Expect(3) = 2e-052
Identities = 71/80 (88%), Positives = 75/80 (93%)
Frame = +1 / +2
Query: 181 SYRAGTGELPSDAALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSI 360
+YRAGTGEL SDA+LRVLP SMTKRYLTSPLARRSMAS TSSVPISS SA +PCLAAKSI
Sbjct: 248 NYRAGTGELASDASLRVLPTSMTKRYLTSPLARRSMASFTSSVPISSTSATSPCLAAKSI 427
Query: 361 ISCVSLMLPMQLPARVLPPV 420
ISCVSLMLP+QLPARVLPPV
Sbjct: 428 ISCVSLMLPIQLPARVLPPV 487
Score = 127 bits (273), Expect(3) = 1e-040
Identities = 55/79 (69%), Positives = 58/79 (73%)
Frame = -1 / -3
Query: 411 QDSGRELHGEHQGHAGDDGLRSQARVDSGHRTDRHRRS**GHGTPRQGRGQVPLXXXXXX 232
QDSGREL+GEHQGHAGDDGLRSQA G R DRHRRS *GHG PRQGRGQVPL
Sbjct: 478 QDSGRELYGEHQGHAGDDGLRSQAWAGGGRRADRHRRSK*GHGAPRQGRGQVPLRHRRRQ 299
Query: 231 XXXRGITRELAGPSSVAAT 175
RG+T EL GPSSV +
Sbjct: 298 HPQRGVTSELTGPSSVVTS 242
Score = 109 bits (232), Expect(4) = 8e-036
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3 / +1
Query: 264 LALGEAFHGLINFFGADQFDVRCQPVLGCEVHHLLRVPDAPHAAPGQSLA 413
LALGEA HGLI FFGADQ DVR QP+LGCEVHHLLRVPDAPH APGQSLA
Sbjct: 331 LALGEALHGLIYFFGADQLDVRHQPMLGCEVHHLLRVPDAPHTAPGQSLA 480
Score = 107 bits (228), Expect(2) = 4e-032
Identities = 47/77 (61%), Positives = 49/77 (63%)
Frame = -3 / -2
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAPKKLMRPWNXXXXXXXXXXXXXXXX 233
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAPKK MRPW+
Sbjct: 479 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAPKK*MRPWSASPRARSGTASSSTSA 300
Query: 232 XXXXRHH*GARRSQLCS 182
R H* A RSQLCS
Sbjct: 299 TPSARRH*RAHRSQLCS 249
Score = 58.3 bits (121), Expect(3) = 2e-052
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 79 VPFYSKYTCLSHDISTNNNMFM*AFVDPSRNKCRSY 186
+PFYSKYT L+HDIST++NMF *+FVDPS +S+
Sbjct: 154 LPFYSKYTSLTHDISTHDNMFR*SFVDPSMK*LQSW 261
Score = 57.0 bits (118), Expect(3) = 1e-040
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / -3
Query: 169 SCLDQQMLT*TYCCLSIYRAISKYI*NKKELNLNASN 59
SCLDQQM+T*TYC +SIYR KYI NKKE+ + SN
Sbjct: 244 SCLDQQMIT*TYCRVSIYRV*VKYILNKKEVLYSNSN 134
Score = 51.5 bits (106), Expect(2) = 4e-032
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -2 / -2
Query: 170 FLLGSTNAHINILLFVDISCDKQVYLE*KGT 78
F+LGSTN H+NIL VDISC +VY E*KG+
Sbjct: 245 FMLGSTNDHLNILSCVDISCVSEVYFE*KGS 153
Score = 51.0 bits (105), Expect(4) = 8e-036
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 80 FLFILNILAYRTIYRQTTICLCEHLLIQA 166
FLFI NIL TIYR TTICL +HLLIQA
Sbjct: 155 FLFIQNILHLHTIYRHTTICLGDHLLIQA 241
Score = 25.4 bits (49), Expect(4) = 8e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 185 TELGPASSLVMP 220
TELGP SSLV P
Sbjct: 252 TELGPVSSLVTP 287
Score = 24.9 bits (48), Expect(2) = 7e-046
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 76 NLNASNTVCLRSY 38
N NASNT+CL+ +
Sbjct: 142 NSNASNTICLKHH 104
Score = 24.4 bits (47), Expect(3) = 2e-052
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 47 KTNSITCV*I 76
KTNSITCV*I
Sbjct: 113 KTNSITCV*I 142
Score = 21.7 bits (41), Expect(3) = 1e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 77 QFKRK*YCLS* 45
QFKRK*Y LS*
Sbjct: 143 QFKRK*YYLS* 111
Score = 21.7 bits (41), Expect(4) = 8e-036
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 46 *DKQYYLRLN 75
*DK YYLRLN
Sbjct: 112 *DK*YYLRLN 141
>gb|CN149533.1|CN149533 WOUND1_63_H02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_H02_A002 3', mRNA sequence
Length = 727
Score = 162 bits (349), Expect = 3e-039
Identities = 67/100 (67%), Positives = 81/100 (81%)
Frame = -2 / +3
Query: 515 RYAYLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHG 336
R +++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG
Sbjct: 222 RAPFMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHG 401
Query: 335 LTADIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
+TADIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 402 VTADIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 521
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -1
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 520 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 341
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 340 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 239
>gb|CF757955.1|CF757955 DSAF1_25_E02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_25_E02_A011 3', mRNA sequence
Length = 528
Score = 162 bits (348), Expect = 4e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 91 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDLAAKHGVTA 270
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 271 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 381
Score = 140 bits (300), Expect = 2e-032
Identities = 67/94 (71%), Positives = 70/94 (74%)
Frame = +1 / -2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAAKS ISCVSLM PMQL
Sbjct: 380 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAAKSSISCVSLMPPMQL 201
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 200 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 99
>gb|CW391632.1|CW391632 fsbb001f077n22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077n22, DNA
sequence
Length = 708
Score = 161 bits (347), Expect = 5e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / -1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 504 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 325
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 324 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 214
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / +2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 215 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 394
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 395 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 496
>gb|CF480170.1|CF480170 POL1_64_D07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D07_A002 3', mRNA sequence
Length = 570
Score = 161 bits (347), Expect = 5e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 145 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 324
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 325 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 435
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 434 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 255
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 254 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 153
>gb|CF484412.1|CF484412 POL1_25_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_D12_A002 3', mRNA sequence
Length = 568
Score = 161 bits (347), Expect = 5e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 108 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 287
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 288 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 398
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -1
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 397 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 218
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 217 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 116
>gb|CF487816.1|CF487816 POL1_46_C06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_C06_A002 3', mRNA sequence
Length = 549
Score = 161 bits (347), Expect = 5e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 90 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 269
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 270 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 380
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -3
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 379 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 200
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 199 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 98
>gb|CN147510.1|CN147510 WOUND1_50_E09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_E09_A002 3', mRNA sequence
Length = 725
Score = 161 bits (347), Expect = 5e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 303 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 482
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 483 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 593
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 592 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 413
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 412 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 311
>gb|CN148236.1|CN148236 WOUND1_55_B09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_55_B09_A002 3', mRNA sequence
Length = 549
Score = 161 bits (347), Expect = 5e-039
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 96 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 275
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 276 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 386
Score = 137 bits (294), Expect = 1e-031
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -3
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 385 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 206
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 205 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 104
>gb|BG052001.1|BG052001 RHIZ2_7_F11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 665
Score = 161 bits (346), Expect = 7e-039
Identities = 65/97 (67%), Positives = 80/97 (82%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKM+++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 327 FMSLLKPNGKMVMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 506
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 507 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 617
Score = 135 bits (289), Expect = 5e-031
Identities = 65/94 (69%), Positives = 68/94 (72%)
Frame = +1 / -2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 616 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 437
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ ILP GL R
Sbjct: 436 PARVLFPMMRSNGGISRALVGRPTMTILPLGLSR 335
>gb|CW032099.1|CW032099 104_261_10501183_114_30363 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501183, DNA
sequence
Length = 577
Score = 160 bits (345), Expect = 1e-038
Identities = 65/94 (69%), Positives = 79/94 (84%)
Frame = -2 / -3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 287 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 108
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTL 225
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL
Sbjct: 107 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTL 6
Score = 136 bits (292), Expect = 2e-031
Identities = 65/92 (70%), Positives = 68/92 (73%)
Frame = +1 / +1
Query: 223 LRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQLPA 402
LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQLPA
Sbjct: 4 LRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQLPA 183
Query: 403 RVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
RVL P+ + I R GRP+ IILP GL R
Sbjct: 184 RVLFPMMRSNGGISRALVGRPTMIILPLGLSR 279
>gb|BG048260.1|BG048260 OV1_16_A02.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 471
Score = 160 bits (343), Expect = 2e-038
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = -2 / +3
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++L KP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 24 FMSLFKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 203
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 204 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 314
Score = 138 bits (295), Expect = 8e-032
Identities = 66/94 (70%), Positives = 69/94 (73%)
Frame = +1 / -3
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 313 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 134
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 133 PARVLFPMMRSNGGISRALVGRPTMIILPLGLNR 32
>gb|CN140813.1|CN140813 OX1_47_F12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_47_F12_A002 3', mRNA sequence
Length = 669
Score = 160 bits (343), Expect = 2e-038
Identities = 65/97 (67%), Positives = 81/97 (83%)
Frame = -2 / +1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP+GKMI++GLP K L+I F L+ G KTLAGSC+G +R+TQEM+D AAKHG+TA
Sbjct: 76 FMSLLKPKGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRNTQEMLDVAAKHGVTA 255
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYRFVIDIGNTL A
Sbjct: 256 DIELVDADYVNTAMERLAKADVRYRFVIDIGNTLKNA 366
Score = 133 bits (285), Expect = 2e-030
Identities = 64/94 (68%), Positives = 68/94 (72%)
Frame = +1 / -2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMTKRYLTS LARRSMA T S +SMSAV PCLAA S ISCV LM PMQL
Sbjct: 365 AFLRVLPMSMTKRYLTSALARRSMAVFT*SASTNSMSAVTPCLAATSSISCVFLMPPMQL 186
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 185 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 84
>gb|CN145887.1|CN145887 WOUND1_36_A11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_A11_A002 3', mRNA sequence
Length = 819
Score = 159 bits (341), Expect = 4e-038
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = -2 / +1
Query: 506 YLALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTA 327
+++LLKP GKMI++GLP K L+I F L+ G KTLAGSC+G +RDTQEM+D AAKHG+TA
Sbjct: 367 FMSLLKPNGKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTA 546
Query: 326 DIELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAA 216
DIEL+ + VN AMERLAK +VRYR VIDIGNTL A
Sbjct: 547 DIELVDADYVNTAMERLAKADVRYRLVIDIGNTLKNA 657
Score = 136 bits (291), Expect = 3e-031
Identities = 65/94 (69%), Positives = 69/94 (73%)
Frame = +1 / -2
Query: 217 AALRVLPMSMTKRYLTSPLARRSMASLTSSVPISSMSAVNPCLAAKSIISCVSLMLPMQL 396
A LRVLPMSMT+RYLTS LARRSMA T S SSMSAV PCLAA S ISCVSLM PMQL
Sbjct: 656 AFLRVLPMSMTRRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSISCVSLMPPMQL 477
Query: 397 PARVLPPVTKEKAEICRGFSGRPSRIILPWGLRR 498
PARVL P+ + I R GRP+ IILP GL R
Sbjct: 476 PARVLFPMMRSNGGISRALVGRPTMIILPLGLSR 375
>gb|CW217045.1|CW217045 104_650_11195446_116_37132_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195446, DNA
sequence
Length = 586
Score = 90.4 bits (191), Expect(2) = 2e-036
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -2 / +3
Query: 428 SLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTADIELIGT 306
S+ TGGKTLAGSCMGSIRDTQEMMDFAAKHGL AD+ELIGT
Sbjct: 462 SVHTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADVELIGT 584
Score = 84.0 bits (177), Expect(2) = 2e-036
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1 / +1
Query: 513 VRLPCSPQAPGQDDPAWPA*EASADLCLLFGYW 415
VRLPCSPQAPGQDD AWPA*EASADLCLLFGYW
Sbjct: 181 VRLPCSPQAPGQDDLAWPA*EASADLCLLFGYW 279
Score = 82.2 bits (173), Expect(2) = 3e-031
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +1 / -1
Query: 304 SVPISSMSAVNPCLAAKSIISCVSLMLPMQLPARVLPPV 420
SVPISS SA +PCLAAKSIISCVSLMLP+QLPARVLPPV
Sbjct: 586 SVPISSTSATSPCLAAKSIISCVSLMLPIQLPARVLPPV 470
Score = 82.2 bits (173), Expect(2) = 4e-033
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +3 / -3
Query: 306 GADQFDVRCQPVLGCEVHHLLRVPDAPHAAPGQSLA 413
GADQ DVR QP+LGCEVHHLLRVPDAPH APGQSLA
Sbjct: 584 GADQLDVRHQPMLGCEVHHLLRVPDAPHTAPGQSLA 477
Score = 81.3 bits (171), Expect(2) = 4e-033
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1 / -2
Query: 415 PVTKEKAEICRGFSGRPSRIILPWGLRRAR*AYL 516
PVTKEKAEICRGFSGRPS+IILPWGLRRAR*AY+
Sbjct: 279 PVTKEKAEICRGFSGRPSKIILPWGLRRAR*AYM 178
Score = 78.0 bits (164), Expect(2) = 3e-030
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / +2
Query: 533 SSGRPGRYAYLALLKPQGKMILLGLPEKPLQISAFSLVTG 414
+S YAYLALLKPQGKMILLGLPEKPLQISAFSLVTG
Sbjct: 161 ASASMSMYAYLALLKPQGKMILLGLPEKPLQISAFSLVTG 280
Score = 75.8 bits (159), Expect(2) = 3e-030
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = -3 / +1
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG*QRTSN*SAP 305
ARLWPGA WGASGTRRR*WTSQPS G RTS+*SAP
Sbjct: 478 ARLWPGAVWGASGTRRR*WTSQPSMGWWRTSS*SAP 585
Score = 74.8 bits (157), Expect(2) = 3e-031
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +3 / -1
Query: 417 SNQREGRDLQRLLRQAKQDHLALGLEESKVSVPARA 524
SNQREGRDLQRLLRQAKQDHLALGLEESKVSV A
Sbjct: 277 SNQREGRDLQRLLRQAKQDHLALGLEESKVSVHGHA 170
>gb|CW122627.1|CW122627 104_501_11110773_116_34677_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110773, DNA
sequence
Length = 621
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / -3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 379 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 200
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 199 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 89
>gb|CW465934.1|CW465934 fsbb001f216o21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216o21, DNA
sequence
Length = 581
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / -2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 358 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 179
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 178 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 68
>gb|CD428180.1|CD428180 ETH1_28_C02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_C02_A002 3', mRNA sequence
Length = 639
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 200 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 379
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 380 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 490
>gb|CD462540.1|CD462540 ETH1_38_C08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_C08_A002 3', mRNA sequence
Length = 715
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 288 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 467
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 468 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 578
>gb|CF430956.1|CF430956 NIT1_4_F06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_F06_A002 3', mRNA sequence
Length = 540
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 94 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 273
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 274 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 384
>gb|CF431001.1|CF431001 NIT1_4_D08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_D08_A002 3', mRNA sequence
Length = 580
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 132 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 311
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 312 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 422
>gb|CF431564.1|CF431564 NIT1_8_B02.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_8_B02_A002 3', mRNA sequence
Length = 485
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 38 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 217
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 218 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 328
>gb|CF432804.1|CF432804 NIT1_19_E10.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_E10_A002 3', mRNA sequence
Length = 538
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 96 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 275
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 276 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 386
>gb|CN134387.1|CN134387 OX1_26_C04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_C04_A002 3', mRNA sequence
Length = 745
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 308 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 487
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 488 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 598
>gb|CX608350.1|CX608350 ANR1_38_C09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_C09_A002 3', mRNA sequence
Length = 598
Score = 138 bits (297), Expect = 4e-032
Identities = 53/97 (54%), Positives = 77/97 (79%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GSI D Q M+DFA +HG+TAD
Sbjct: 174 LALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITAD 353
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
IEL+ + VN AMERL + +VRYRFV+D+ +L AA+
Sbjct: 354 IELVRMDYVNTAMERLERNDVRYRFVVDVAGSLGAAA 464
>gb|CW243961.1|CW243961 104_704_11220332_116_37584_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220332, DNA
sequence
Length = 650
Score = 84.0 bits (177), Expect(2) = 3e-031
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1 / +2
Query: 513 VRLPCSPQAPGQDDPAWPA*EASADLCLLFGYW 415
VRLPCSPQAPGQDD AWPA*EASADLCLLFGYW
Sbjct: 269 VRLPCSPQAPGQDDLAWPA*EASADLCLLFGYW 367
Score = 81.3 bits (171), Expect(2) = 5e-029
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1 / -2
Query: 415 PVTKEKAEICRGFSGRPSRIILPWGLRRAR*AYL 516
PVTKEKAEICRGFSGRPS+IILPWGLRRAR*AY+
Sbjct: 367 PVTKEKAEICRGFSGRPSKIILPWGLRRAR*AYM 266
Score = 78.0 bits (164), Expect(2) = 8e-027
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / +3
Query: 533 SSGRPGRYAYLALLKPQGKMILLGLPEKPLQISAFSLVTG 414
+S YAYLALLKPQGKMILLGLPEKPLQISAFSLVTG
Sbjct: 249 ASASMSMYAYLALLKPQGKMILLGLPEKPLQISAFSLVTG 368
Score = 74.8 bits (157), Expect(2) = 1e-026
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +3 / -1
Query: 417 SNQREGRDLQRLLRQAKQDHLALGLEESKVSVPARA 524
SNQREGRDLQRLLRQAKQDHLALGLEESKVSV A
Sbjct: 365 SNQREGRDLQRLLRQAKQDHLALGLEESKVSVHGHA 258
Score = 73.5 bits (154), Expect(2) = 3e-031
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -2 / +1
Query: 428 SLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGL 333
S+ TGGKTLAGSCMGSIRDTQEMMDFAAKHGL
Sbjct: 550 SVHTGGKTLAGSCMGSIRDTQEMMDFAAKHGL 645
Score = 68.4 bits (143), Expect(2) = 5e-029
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1 / -1
Query: 328 AVNPCLAAKSIISCVSLMLPMQLPARVLPPV 420
A +PCLAAKSIISCVSLMLP+QLPARVLPPV
Sbjct: 650 ATSPCLAAKSIISCVSLMLPIQLPARVLPPV 558
Score = 67.0 bits (140), Expect(2) = 1e-026
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +3 / -3
Query: 333 QPVLGCEVHHLLRVPDAPHAAPGQSLA 413
QP+LGCEVHHLLRVPDAPH APGQSLA
Sbjct: 645 QPMLGCEVHHLLRVPDAPHTAPGQSLA 565
Score = 64.3 bits (134), Expect(2) = 8e-027
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -3 / +2
Query: 412 ARLWPGAAWGASGTRRR*WTSQPSTG 335
ARLWPGA WGASGTRRR*WTSQPS G
Sbjct: 566 ARLWPGAVWGASGTRRR*WTSQPSMG 643
>gb|BF587706.1|BF587706 FM1_39_F09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 614
Score = 130 bits (279), Expect = 1e-029
Identities = 51/97 (52%), Positives = 76/97 (78%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 158 LALLKPLGQMVIVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 337
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN AMERL K +VRYRFVID+ +L +A+
Sbjct: 338 VEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSLGSAA 448
>gb|BG241324.1|BG241324 RHIZ2_49_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 462
Score = 130 bits (279), Expect = 1e-029
Identities = 51/97 (52%), Positives = 76/97 (78%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 9 LALLKPLGQMVIVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 188
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN AMERL K +VRYRFVID+ +L +A+
Sbjct: 189 VEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSLGSAA 299
>gb|BG559907.1|BG559907 RHIZ2_75_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 595
Score = 130 bits (279), Expect = 1e-029
Identities = 51/97 (52%), Positives = 76/97 (78%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 89 LALLKPLGQMVIVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 268
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN AMERL K +VRYRFVID+ +L +A+
Sbjct: 269 VEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSLGSAA 379
>gb|CW027561.1|CW027561 104_254_10498588_116_30396 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498588, DNA
sequence
Length = 820
Score = 130 bits (278), Expect = 2e-029
Identities = 49/92 (53%), Positives = 73/92 (79%)
Frame = -2 / -3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GS+ D Q M+DFA +HG+TAD
Sbjct: 488 LALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVAGNGVGSVADCQAMLDFAGEHGVTAD 309
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++ + VN A+ERL K +VRYRFVID+ +
Sbjct: 308 IEVVQMDYVNTAIERLEKNDVRYRFVIDVAGS 213
>gb|CW038410.1|CW038410 104_270_10504910_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504910, DNA
sequence
Length = 636
Score = 130 bits (278), Expect = 2e-029
Identities = 49/92 (53%), Positives = 73/92 (79%)
Frame = -2 / -1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GS+ D Q M+DFA +HG+TAD
Sbjct: 489 LALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVAGNGVGSVADCQAMLDFAGEHGVTAD 310
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++ + VN A+ERL K +VRYRFVID+ +
Sbjct: 309 IEVVQMDYVNTAIERLEKNDVRYRFVIDVAGS 214
>gb|CN131793.1|CN131793 OX1_2_G05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_2_G05_A002 3', mRNA sequence
Length = 576
Score = 130 bits (278), Expect = 2e-029
Identities = 49/92 (53%), Positives = 73/92 (79%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GS+ D Q M+DFA +HG+TAD
Sbjct: 80 LALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVAGNGVGSVADCQAMLDFAGEHGVTAD 259
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++ + VN A+ERL K +VRYRFVID+ +
Sbjct: 260 IEVVQMDYVNTAIERLEKNDVRYRFVIDVAGS 355
>gb|CN138045.1|CN138045 OX1_61_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_H04_A002 3', mRNA sequence
Length = 698
Score = 130 bits (278), Expect = 2e-029
Identities = 49/92 (53%), Positives = 73/92 (79%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A++++TGGK +AG+ +GS+ D Q M+DFA +HG+TAD
Sbjct: 218 LALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVAGNGVGSVADCQAMLDFAGEHGVTAD 397
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNT 228
IE++ + VN A+ERL K +VRYRFVID+ +
Sbjct: 398 IEVVQMDYVNTAIERLEKNDVRYRFVIDVAGS 493
>gb|BG159378.1|BG159378 OV2_7_A11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 591
Score = 128 bits (274), Expect = 6e-029
Identities = 50/97 (51%), Positives = 76/97 (78%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 136 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 315
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L +A+
Sbjct: 316 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGSAA 426
>gb|BI075108.1|BI075108 IP1_19_G01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 543
Score = 128 bits (274), Expect = 6e-029
Identities = 50/97 (51%), Positives = 76/97 (78%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 31 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 210
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L +A+
Sbjct: 211 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGSAA 321
>gb|BG355941.2|BG355941 EM1_18_E06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 635
Score = 128 bits (274), Expect = 6e-029
Identities = 50/97 (51%), Positives = 76/97 (78%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 88 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 267
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L +A+
Sbjct: 268 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGSAA 378
>gb|CX614740.1|CX614740 GABR1_16_B02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_16_B02_A002 3', mRNA sequence
Length = 599
Score = 128 bits (274), Expect = 6e-029
Identities = 50/97 (51%), Positives = 76/97 (78%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 93 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 272
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L +A+
Sbjct: 273 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGSAA 383
>gb|CX622493.1|CX622493 GABR1_64_G03.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_G03_A002 3', mRNA sequence
Length = 746
Score = 128 bits (274), Expect = 6e-029
Identities = 50/97 (51%), Positives = 76/97 (78%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 235 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 414
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L +A+
Sbjct: 415 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGSAA 525
>gb|CD229956.1|CD229956 SS1_40_H11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H11_A012 3', mRNA sequence
Length = 635
Score = 127 bits (272), Expect = 1e-028
Identities = 50/97 (51%), Positives = 75/97 (77%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 88 LALLKPLGQMVIVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 267
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L A+
Sbjct: 268 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGFAA 378
>gb|BG466123.1|BG466123 RHIZ2_48_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 473
Score = 127 bits (271), Expect = 2e-028
Identities = 50/97 (51%), Positives = 74/97 (76%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P PL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 20 LALLKPLGQMVIVGGPSNPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 199
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN AMERL K +VRYRFVID+ +L A+
Sbjct: 200 VEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSLGFAA 310
>gb|BM328692.1|BM328692 PIC1_25_D10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 555
Score = 127 bits (271), Expect = 2e-028
Identities = 50/97 (51%), Positives = 75/97 (77%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 7 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 186
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L A+
Sbjct: 187 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGFAA 297
>gb|CN143114.1|CN143114 WOUND1_14_E12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_14_E12_A002 3', mRNA sequence
Length = 638
Score = 127 bits (271), Expect = 2e-028
Identities = 49/97 (50%), Positives = 76/97 (78%)
Frame = -2 / +1
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ ++++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 133 LALLKPLGQMVVVGGPSKPLELPSYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 312
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L +A+
Sbjct: 313 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGSAA 423
>gb|CN148699.1|CN148699 WOUND1_58_F02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_F02_A002 3', mRNA sequence
Length = 687
Score = 127 bits (271), Expect = 2e-028
Identities = 50/97 (51%), Positives = 75/97 (77%)
Frame = -2 / +3
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +GS+ D Q M++FA KHG+ A+
Sbjct: 141 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAE 320
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + VN A+ERL K +VRYRFVID+ +L A+
Sbjct: 321 VEVIKMDYVNTAIERLEKNDVRYRFVIDVAGSLGFAA 431
>gb|CX622436.1|CX622436 GABR1_64_A04.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_A04_A002 3', mRNA sequence
Length = 651
Score = 124 bits (265), Expect = 1e-027
Identities = 48/97 (49%), Positives = 75/97 (77%)
Frame = -2 / +2
Query: 503 LALLKPQGKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLTAD 324
LALLKP G+M+++G P KPL++ A+++V GGK +AG+ +G++ D Q M++FA KHG+ A+
Sbjct: 155 LALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGNVGDCQAMLEFAGKHGIGAE 334
Query: 323 IELIGTEEVNEAMERLAKGEVRYRFVIDIGNTLNAAS 213
+E+I + +N A+ERL K +VRYRFVID+ +L A+
Sbjct: 335 VEVIKMDYLNTAIERLEKNDVRYRFVIDVAGSLGFAA 445
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 595,105,336
Number of Sequences: 832831
Number of extensions: 7832150
Number of successful extensions: 122546
Number of sequences better than 1.0e-020: 54
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 14836167612
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)