TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.2
(602 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW745625.1|AW745625 WS1_36_B11.b1_A002 Water-stressed 1 ... 330 8e-090
gb|AW924784.1|AW924784 WS1_72_D10.b1_A002 Water-stressed 1 ... 330 8e-090
gb|CF430329.1|CF430329 PH1_27_A10.g1_A002 Phosphorous-defic... 249 1e-079
gb|AW746572.1|AW746572 WS1_54_H03.b1_A002 Water-stressed 1 ... 291 6e-078
gb|CD205518.1|CD205518 HS1_14_F07.g1_A012 Heat-shocked seed... 161 3e-060
gb|CD213137.1|CD213137 HS1_28_E12.g1_A012 Heat-shocked seed... 231 7e-060
gb|CD222882.1|CD222882 CCC1_24_G10.g1_A007 Callus culture/c... 202 3e-051
gb|AW678519.1|AW678519 WS1_16_A09.b1_A002 Water-stressed 1 ... 202 5e-051
gb|BE594074.1|BE594074 WS1_101_H05.b1_A002 Water-stressed 1... 202 5e-051
gb|CD223169.1|CD223169 CCC1_26_H01.g1_A007 Callus culture/c... 202 5e-051
gb|CN134496.1|CN134496 OX1_26_E07.g1_A002 Oxidatively-stres... 202 5e-051
gb|CN148626.1|CN148626 WOUND1_57_F11.g1_A002 Wounded leaves... 202 5e-051
gb|CD211330.1|CD211330 HS1_59_D10.g1_A012 Heat-shocked seed... 201 6e-051
gb|CX610090.1|CX610090 ANR1_16_C06.g1_A002 Anaerobic roots ... 200 2e-050
gb|BG556794.1|BG556794 EM1_38_F11.b1_A002 Embryo 1 (EM1) So... 199 2e-050
gb|BG462809.1|BG462809 EM1_45_H01.b1_A002 Embryo 1 (EM1) So... 199 2e-050
gb|BF177265.1|BF177265 EM1_1_C01.b1_A002 Embryo 1 (EM1) Sor... 191 1e-047
gb|BM324999.1|BM324999 PIC1_38_E05.b1_A002 Pathogen-infecte... 134 6e-044
gb|CD212646.1|CD212646 HS1_6_D03.g1_A012 Heat-shocked seedl... 128 2e-043
gb|CN130931.1|CN130931 RHOH1_44_G05.g1_A002 Acid- and alkal... 176 2e-043
gb|BG649153.1|BG649153 EM1_56_H02.b1_A002 Embryo 1 (EM1) So... 170 2e-041
gb|AW672118.1|AW672118 LG1_357_F09.b1_A002 Light Grown 1 (L... 110 1e-040
gb|CD211102.1|CD211102 HS1_61_B11.b1_A012 Heat-shocked seed... 166 3e-040
gb|CD211692.1|CD211692 HS1_63_G09.g1_A012 Heat-shocked seed... 111 3e-038
gb|BG487477.1|BG487477 EM1_65_E06.b1_A002 Embryo 1 (EM1) So... 157 1e-037
gb|CD462309.1|CD462309 SA1_40_H09.g1_A002 Salicylic acid-tr... 134 1e-030
gb|CB928016.1|CB928016 ABA1_35_B03.g1_A012 Abscisic acid-tr... 126 3e-028
gb|CD206399.1|CD206399 HS1_22_H09.g1_A012 Heat-shocked seed... 78 2e-027
gb|BE592989.1|BE592989 WS1_93_A01.b1_A002 Water-stressed 1 ... 105 5e-026
gb|CD229180.1|CD229180 CCC1_13_B11.g1_A007 Callus culture/c... 106 6e-025
gb|CW356366.1|CW356366 fsbb001f021g14f0 Sorghum methylation... 75 2e-024
gb|CD229448.1|CD229448 CCC1_15_C04.g1_A007 Callus culture/c... 107 1e-022
gb|BE367552.1|BE367552 PI1_9_C11.b1_A002 Pathogen induced 1... 105 2e-022
gb|CD227619.1|CD227619 CCC1_52_F07.g1_A007 Callus culture/c... 102 6e-021
gb|BE358492.1|BE358492 DG1_30_E09.b1_A002 Dark Grown 1 (DG1... 101 8e-021
>gb|AW745625.1|AW745625 WS1_36_B11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 591
Score = 330 bits (716), Expect = 8e-090
Identities = 122/129 (94%), Positives = 127/129 (98%)
Frame = +3 / +1
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FDCRHCHN
Sbjct: 187 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFDCRHCHN 366
Query: 312 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDD 491
ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEV+QVCINCGVCMGKYFCGLCKLFDDD
Sbjct: 367 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVQQVCINCGVCMGKYFCGLCKLFDDD 546
Query: 492 VSKQQYHCN 518
VSKQQYHCN
Sbjct: 547 VSKQQYHCN 573
Score = 298 bits (645), Expect = 5e-080
Identities = 119/132 (90%), Positives = 124/132 (93%)
Frame = -3 / -3
Query: 531 IFHIRCSDTAV*RHHRRRVCTNHRSTSPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVH 352
IFHIRCSDTAV*RHHR+RVCT HRSTSPCKH N* ILV PPVQCHTMSIQPAALHGVEVH
Sbjct: 586 IFHIRCSDTAV*RHHRQRVCTIHRSTSPCKHHN*CILVVPPVQCHTMSIQPAALHGVEVH 407
Query: 351 ASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQISHSHQGLNH*S 172
ASSFYQF*WNS*FHCGSVGNQK HCSKELLCGISFYNVDTH+ALSLS+ISH+HQ LNH*S
Sbjct: 406 ASSFYQF*WNS*FHCGSVGNQKLHCSKELLCGISFYNVDTHTALSLSEISHTHQDLNH*S 227
Query: 171 CLYCSFHQTTES 136
LYCSFHQT +S
Sbjct: 226 SLYCSFHQTAKS 191
Score = 286 bits (619), Expect = 2e-076
Identities = 117/128 (91%), Positives = 120/128 (93%)
Frame = -2 / -2
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q*YCCLETSSSKSLH PQKYFPMQTPQL+HTC TSCSVPHNEHTTCCTSWRGSSCLFILS
Sbjct: 569 Q*YCCLETSSSKSLHNPQKYFPMQTPQLMHTCCTSCSVPHNEHTTCCTSWRGSSCLFILS 390
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSVL*F 155
ILMEFLVSLWQCRQSK SLQQGALMRHLLL*CGHP CIIPF NFS SSGFEPLI SVL*F
Sbjct: 389 ILMEFLVSLWQCRQSKTSLQQGALMRHLLL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*F 210
Query: 154 PSDNRELL 131
PSD++E L
Sbjct: 209 PSDSKEPL 186
Score = 283 bits (613), Expect = 1e-075
Identities = 121/132 (91%), Positives = 128/132 (96%)
Frame = -1 / -1
Query: 536 STYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWK 357
S YSTSVAVILLFRDIIV+EFAQ+TEVLPHANT ID YL +LLFSATQ*AYNLLHFMAWK
Sbjct: 591 SAYSTSVAVILLFRDIIVKEFAQSTEVLPHANTTIDAYLLYLLFSATQ*AYNLLHFMAWK 412
Query: 356 FMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIRV*TI 177
FMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR+*TI
Sbjct: 411 FMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPILHYPFLKFLILIRI*TI 232
Query: 176 DLVCIVVSIRQQ 141
DL+CIVVSIRQQ
Sbjct: 231 DLLCIVVSIRQQ 196
Score = 281 bits (607), Expect = 9e-075
Identities = 122/133 (91%), Positives = 125/133 (93%)
Frame = +1 / +2
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLIADTATM
Sbjct: 188 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLIADTATM 367
Query: 313 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGSTSVVCANSSTMM 492
KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRR +KY SI VFAWGSTSV CANS TMM
Sbjct: 368 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRYNKYASIVVFAWGSTSVDCANSLTMM 547
Query: 493 SLNSSITATDVEY 531
SLNSSITATDVEY
Sbjct: 548 SLNSSITATDVEY 586
Score = 271 bits (587), Expect = 5e-072
Identities = 124/151 (82%), Positives = 132/151 (87%)
Frame = +2 / +3
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 135 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 314
Query: 260 HKSSLLQ*NF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGATSMYQLR 439
HKSSLLQ*+F*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGG TSM+QL
Sbjct: 315 HKSSLLQ*SF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGTTSMHQLW 494
Query: 440 CLHGEVLLWFVQTLRR*CL*TAVSLQRMWNM 532
CLHGEVLLW VQTL R*CL*TAVSLQRMWNM
Sbjct: 495 CLHGEVLLWIVQTL*R*CL*TAVSLQRMWNM 587
>gb|AW924784.1|AW924784 WS1_72_D10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 330 bits (716), Expect = 8e-090
Identities = 122/129 (94%), Positives = 127/129 (98%)
Frame = +3 / +2
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FDCRHCHN
Sbjct: 158 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFDCRHCHN 337
Query: 312 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDD 491
ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEV+QVCINCGVCMGKYFCGLCKLFDDD
Sbjct: 338 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVQQVCINCGVCMGKYFCGLCKLFDDD 517
Query: 492 VSKQQYHCN 518
VSKQQYHCN
Sbjct: 518 VSKQQYHCN 544
Score = 302 bits (654), Expect = 3e-081
Identities = 121/136 (88%), Positives = 127/136 (93%)
Frame = -3 / -3
Query: 543 LRFYIFHIRCSDTAV*RHHRRRVCTNHRSTSPCKHRN*YILVAPPVQCHTMSIQPAALHG 364
L+F IFHIRCSDTAV*RHHR+RVCT HRSTSPCKH N* ILV PPVQCHTMSIQPAALHG
Sbjct: 569 LQFCIFHIRCSDTAV*RHHRQRVCTIHRSTSPCKHHN*CILVVPPVQCHTMSIQPAALHG 390
Query: 363 VEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQISHSHQGL 184
VEVHASSFYQF*WNS*FHCGSVGNQK HCSKELLCGISFYNVDTH+ALSLS+ISH+HQ L
Sbjct: 389 VEVHASSFYQF*WNS*FHCGSVGNQKLHCSKELLCGISFYNVDTHTALSLSEISHTHQDL 210
Query: 183 NH*SCLYCSFHQTTES 136
NH*S LYCSFHQT +S
Sbjct: 209 NH*SSLYCSFHQTAKS 162
Score = 288 bits (624), Expect = 4e-077
Identities = 123/136 (90%), Positives = 131/136 (96%)
Frame = -1 / -1
Query: 548 PASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHF 369
P S+S YSTSVAVILLFRDIIV+EFAQ+TEVLPHANT ID YL +LLFSATQ*AYNLLHF
Sbjct: 574 PPSNSAYSTSVAVILLFRDIIVKEFAQSTEVLPHANTTIDAYLLYLLFSATQ*AYNLLHF 395
Query: 368 MAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIR 189
MAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR
Sbjct: 394 MAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPILHYPFLKFLILIR 215
Query: 188 V*TIDLVCIVVSIRQQ 141
+*TIDL+CIVVSIRQQ
Sbjct: 214 I*TIDLLCIVVSIRQQ 167
Score = 286 bits (619), Expect = 2e-076
Identities = 117/128 (91%), Positives = 120/128 (93%)
Frame = -2 / -2
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q*YCCLETSSSKSLH PQKYFPMQTPQL+HTC TSCSVPHNEHTTCCTSWRGSSCLFILS
Sbjct: 540 Q*YCCLETSSSKSLHNPQKYFPMQTPQLMHTCCTSCSVPHNEHTTCCTSWRGSSCLFILS 361
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSVL*F 155
ILMEFLVSLWQCRQSK SLQQGALMRHLLL*CGHP CIIPF NFS SSGFEPLI SVL*F
Sbjct: 360 ILMEFLVSLWQCRQSKTSLQQGALMRHLLL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*F 181
Query: 154 PSDNRELL 131
PSD++E L
Sbjct: 180 PSDSKEPL 157
Score = 284 bits (615), Expect = 7e-076
Identities = 124/137 (90%), Positives = 127/137 (92%)
Frame = +1 / +3
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLIADTATM
Sbjct: 159 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLIADTATM 338
Query: 313 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGSTSVVCANSSTMM 492
KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRR +KY SI VFAWGSTSV CANS TMM
Sbjct: 339 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRYNKYASIVVFAWGSTSVDCANSLTMM 518
Query: 493 SLNSSITATDVEYVESE 543
SLNSSITATDVEY E E
Sbjct: 519 SLNSSITATDVEYAELE 569
Score = 274 bits (593), Expect = 8e-073
Identities = 126/156 (80%), Positives = 135/156 (86%)
Frame = +2 / +1
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 106 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 285
Query: 260 HKSSLLQ*NF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGATSMYQLR 439
HKSSLLQ*+F*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGG TSM+QL
Sbjct: 286 HKSSLLQ*SF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGTTSMHQLW 465
Query: 440 CLHGEVLLWFVQTLRR*CL*TAVSLQRMWNM*NRRQ 547
CLHGEVLLW VQTL R*CL*TAVSLQRMWNM N R+
Sbjct: 466 CLHGEVLLWIVQTL*R*CL*TAVSLQRMWNMQNWRE 573
>gb|CF430329.1|CF430329 PH1_27_A10.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A10_A002 5', mRNA sequence
Length = 770
Score = 249 bits (539), Expect(3) = 1e-079
Identities = 93/100 (93%), Positives = 98/100 (98%)
Frame = +3 / +2
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FDCRHCHN
Sbjct: 110 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFDCRHCHN 289
Query: 312 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCI 431
ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEV+QVCI
Sbjct: 290 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVQQVCI 409
Score = 221 bits (478), Expect(2) = 1e-070
Identities = 88/97 (90%), Positives = 92/97 (94%)
Frame = -3 / -1
Query: 426 ILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISF 247
ILV PPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQK HCSKELLCGISF
Sbjct: 404 ILVVPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKLHCSKELLCGISF 225
Query: 246 YNVDTHSALSLSQISHSHQGLNH*SCLYCSFHQTTES 136
YNVDTH+ALSLS+ISH+HQ LNH*S LYCSFHQT +S
Sbjct: 224 YNVDTHTALSLSEISHTHQDLNH*SSLYCSFHQTAKS 114
Score = 219 bits (473), Expect(2) = 3e-067
Identities = 90/100 (90%), Positives = 93/100 (93%)
Frame = -2 / -3
Query: 430 IHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHL 251
+HTC TSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSK SLQQGALMRHL
Sbjct: 408 MHTCCTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKTSLQQGALMRHL 229
Query: 250 LL*CGHP*CIIPFSNFS*SSGFEPLILSVL*FPSDNRELL 131
LL*CGHP CIIPF NFS SSGFEPLI SVL*FPSD++E L
Sbjct: 228 LL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*FPSDSKEPL 109
Score = 218 bits (471), Expect = 5e-056
Identities = 96/136 (70%), Positives = 109/136 (80%)
Frame = -1 / -2
Query: 548 PASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHF 369
P++ + ++ ++L I+ E T P D YL +LLFSATQ*AYNLLHF
Sbjct: 526 PSNSAYSTSVAVILLFRDIIVKEFAQSTEVTSPCKPPQXDAYLLYLLFSATQ*AYNLLHF 347
Query: 368 MAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIR 189
MAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR
Sbjct: 346 MAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPILHYPFLKFLILIR 167
Query: 188 V*TIDLVCIVVSIRQQ 141
+*TIDL+CIVVSIRQQ
Sbjct: 166 I*TIDLLCIVVSIRQQ 119
Score = 214 bits (462), Expect = 9e-055
Identities = 96/120 (80%), Positives = 101/120 (84%)
Frame = +1 / +3
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLIADTATM
Sbjct: 111 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLIADTATM 290
Query: 313 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGSTSVVCANSSTMM 492
KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRR +KY S G + V +S M
Sbjct: 291 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRYNKYASXCGGLHGEVTSVDCANSLTM 470
Score = 202 bits (435), Expect(2) = 2e-062
Identities = 93/119 (78%), Positives = 102/119 (85%)
Frame = +2 / +1
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 58 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 237
Query: 260 HKSSLLQ*NF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGATSMYQL 436
HKSSLLQ*+F*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGG TSM+ +
Sbjct: 238 HKSSLLQ*SF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGTTSMHXI 414
Score = 66.1 bits (138), Expect(2) = 1e-070
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3 / -1
Query: 543 LRFYIFHIRCSDTAV*RHHRRRVCTNHRSTSP 448
L+F IFHIRCSDTAV*RHHR+RVCT HRS P
Sbjct: 524 LQFCIFHIRCSDTAV*RHHRQRVCTIHRSXFP 429
Score = 60.2 bits (125), Expect(3) = 1e-079
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 450 GKYFCGLCKLFDDDVSKQQYHCN 518
G FCGLCKLFDDDVSKQQYHCN
Sbjct: 431 GSXFCGLCKLFDDDVSKQQYHCN 499
Score = 58.8 bits (122), Expect(2) = 2e-062
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +2 / +1
Query: 449 GEVLLWFVQTLRR*CL*TAVSLQRMWNM*NRRQGE 553
G+ LLW VQTL R*CL*TAVSLQRMWNM N R E
Sbjct: 430 GKXLLWIVQTL*R*CL*TAVSLQRMWNMQNWRGRE 534
Score = 57.0 bits (118), Expect(2) = 3e-067
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -1 / -2
Query: 542 SDSTYSTSVAVILLFRDIIVEEFAQTTEV 456
S+S YSTSVAVILLFRDIIV+EFAQ+TEV
Sbjct: 523 SNSAYSTSVAVILLFRDIIVKEFAQSTEV 437
Score = 27.2 bits (53), Expect(3) = 1e-079
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2 / +1
Query: 539 RRQGEFLPLFKSGCCYSIALK 601
R + F GCCYSIALK
Sbjct: 523 RGRENFFHCSXCGCCYSIALK 585
>gb|AW746572.1|AW746572 WS1_54_H03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 291 bits (630), Expect = 6e-078
Identities = 107/114 (93%), Positives = 112/114 (98%)
Frame = +3 / +1
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FDCRHCHN
Sbjct: 187 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFDCRHCHN 366
Query: 312 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLC 473
ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEV+QVCINCGVCMGKYFCGLC
Sbjct: 367 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVQQVCINCGVCMGKYFCGLC 528
Score = 254 bits (549), Expect = 9e-067
Identities = 103/114 (90%), Positives = 106/114 (92%)
Frame = -2 / -2
Query: 472 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 293
H PQKYFPMQTPQL+HTC TSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ
Sbjct: 527 HNPQKYFPMQTPQLMHTCCTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 348
Query: 292 SKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSVL*FPSDNRELL 131
SK SLQQGALMRHLLL*CGHP CIIPF NFS SSGFEPLI SVL*FPSD++E L
Sbjct: 347 SKTSLQQGALMRHLLL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*FPSDSKEPL 186
Score = 250 bits (540), Expect = 2e-065
Identities = 100/112 (89%), Positives = 104/112 (92%)
Frame = -3 / -3
Query: 471 TNHRSTSPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGN 292
T HRSTSPCKH N* ILV PPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGN
Sbjct: 526 TIHRSTSPCKHHN*CILVVPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGN 347
Query: 291 QKFHCSKELLCGISFYNVDTHSALSLSQISHSHQGLNH*SCLYCSFHQTTES 136
QK HCSKELLCGISFYNVDTH+ALSLS+ISH+HQ LNH*S LYCSFHQT +S
Sbjct: 346 QKLHCSKELLCGISFYNVDTHTALSLSEISHTHQDLNH*SSLYCSFHQTAKS 191
Score = 243 bits (524), Expect = 2e-063
Identities = 102/111 (91%), Positives = 108/111 (97%)
Frame = -1 / -1
Query: 473 AQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSA 294
AQ+TEVLPHANT ID YL +LLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSA
Sbjct: 528 AQSTEVLPHANTTIDAYLLYLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSA 349
Query: 293 IKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIRV*TIDLVCIVVSIRQQ 141
IKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR+*TIDL+CIVVSIRQQ
Sbjct: 348 IKNFIAARSSYAASPSIMWTPILHYPFLKFLILIRI*TIDLLCIVVSIRQQ 196
Score = 240 bits (518), Expect = 2e-062
Identities = 103/113 (91%), Positives = 106/113 (93%)
Frame = +1 / +2
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLIADTATM
Sbjct: 188 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLIADTATM 367
Query: 313 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGSTSVVC 471
KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRR +KY SI VFAWGSTSV C
Sbjct: 368 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRYNKYASIVVFAWGSTSVDC 526
Score = 231 bits (499), Expect = 7e-060
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = +2 / +3
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 135 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 314
Query: 260 HKSSLLQ*NF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGATSMYQLR 439
HKSSLLQ*+F*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGG TSM+QL
Sbjct: 315 HKSSLLQ*SF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGTTSMHQLW 494
Query: 440 CLHGEVLLWFV 472
CLHGEVLLW V
Sbjct: 495 CLHGEVLLWIV 527
>gb|CD205518.1|CD205518 HS1_14_F07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_14_F07_A012 5', mRNA sequence
Length = 609
Score = 161 bits (347), Expect(2) = 3e-060
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3 / +2
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FDCRHCHN
Sbjct: 317 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFDCRHCHN 496
Query: 312 ETK 320
ETK
Sbjct: 497 ETK 505
Score = 138 bits (295), Expect(2) = 3e-054
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = -3 / -2
Query: 321 S*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQISHSHQGLNH*SCLYCSFHQTT 142
S*FHCGSVGNQK HCSKELLCGISFYNVDTH+ALSLS+ISH+HQ LNH*S LYCSFHQT
Sbjct: 506 S*FHCGSVGNQKLHCSKELLCGISFYNVDTHTALSLSEISHTHQDLNH*SSLYCSFHQTA 327
Query: 141 ES 136
+S
Sbjct: 326 KS 321
Score = 132 bits (283), Expect(2) = 8e-049
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = +1 / +3
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLIADTATM
Sbjct: 318 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLIADTATM 497
Query: 313 KLR 321
KLR
Sbjct: 498 KLR 506
Score = 131 bits (280), Expect(2) = 1e-048
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = -1 / -3
Query: 320 LSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIRV*TIDLVCIVVSIRQQ 141
LSFIVAVSAIKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR+*TIDL+CIVVSIRQQ
Sbjct: 505 LSFIVAVSAIKNFIAARSSYAASPSIMWTPILHYPFLKFLILIRI*TIDLLCIVVSIRQQ 326
Score = 127 bits (271), Expect(2) = 6e-046
Identities = 59/81 (72%), Positives = 66/81 (81%)
Frame = +2 / +1
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 265 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 444
Query: 260 HKSSLLQ*NF*LPTLPQ*N*E 322
HKSSLLQ*+F*LPTLPQ*N*E
Sbjct: 445 HKSSLLQ*SF*LPTLPQ*N*E 507
Score = 127 bits (271), Expect(2) = 6e-047
Identities = 55/63 (87%), Positives = 57/63 (90%)
Frame = -2 / -1
Query: 319 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSVL*FPSDNR 140
LVSLWQCRQSK SLQQGALMRHLLL*CGHP CIIPF NFS SSGFEPLI SVL*FPSD++
Sbjct: 504 LVSLWQCRQSKTSLQQGALMRHLLL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*FPSDSK 325
Query: 139 ELL 131
E L
Sbjct: 324 EPL 316
Score = 95.0 bits (201), Expect(2) = 3e-054
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = -2 / -1
Query: 451 PMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFI 341
PMQTPQL+HTC TSCSVPHNEHTTCCTSWRGSSCL +
Sbjct: 609 PMQTPQLMHTCCTSCSVPHNEHTTCCTSWRGSSCLLV 499
Score = 91.3 bits (193), Expect(2) = 3e-060
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = +3 / +2
Query: 336 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCM 449
++ KRHELPRHEVQQVVCSLCGTEQEV+QVCINCGVCM
Sbjct: 494 NETKRHELPRHEVQQVVCSLCGTEQEVQQVCINCGVCM 607
Score = 83.1 bits (175), Expect(2) = 1e-048
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -2
Query: 450 PCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFY 337
PCKH N* ILV PPVQCHTMSIQPAALHGVEVHAS F+
Sbjct: 608 PCKHHN*CILVVPPVQCHTMSIQPAALHGVEVHAS*FH 495
Score = 82.6 bits (174), Expect(2) = 8e-049
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1 / +3
Query: 337 IK*RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAW 450
+K RGMNFHAMKCSRLYAHCVALNRR +KY SI VFAW
Sbjct: 495 MKLRGMNFHAMKCSRLYAHCVALNRRYNKYASIVVFAW 608
Score = 81.7 bits (172), Expect(2) = 6e-047
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -1 / -3
Query: 449 HANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFI 336
HANT ID YL +LLFSATQ*AYNLLHFMAWKFMPL FI
Sbjct: 607 HANTTIDAYLLYLLFSATQ*AYNLLHFMAWKFMPLSFI 494
Score = 78.5 bits (165), Expect(2) = 6e-046
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2 / +1
Query: 338 *NEEA*TSTP*SAAGCMLIVWH*TGGATSMYQLRCLHG 451
*N EA*TSTP*SAAGCMLIVWH*TGG TSM+QL CLHG
Sbjct: 496 *N*EA*TSTP*SAAGCMLIVWH*TGGTTSMHQLWCLHG 609
>gb|CD213137.1|CD213137 HS1_28_E12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_28_E12_A012 5', mRNA sequence
Length = 641
Score = 231 bits (499), Expect = 7e-060
Identities = 86/99 (86%), Positives = 94/99 (94%)
Frame = +3 / +1
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+K NGSNPD+YEKF+KGIM YGCPHYRR+ R+RAPCCNE+FDCRHCHN
Sbjct: 343 KGSLLSDGNYNTEKTNGSNPDEYEKFQKGIMQYGCPHYRRK*RMRAPCCNEVFDCRHCHN 522
Query: 312 ETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVC 428
ETKNSIKI+KMKRHELPRHEVQQ VCSLCGTEQEV+QVC
Sbjct: 523 ETKNSIKINKMKRHELPRHEVQQGVCSLCGTEQEVQQVC 639
Score = 207 bits (446), Expect = 1e-052
Identities = 84/100 (84%), Positives = 89/100 (89%)
Frame = -2 / -1
Query: 430 IHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHL 251
+HTC TSCSVPHNEHT CCTSWRGSSCLFIL ILMEFLVSLWQCRQSK SLQQGAL+RH
Sbjct: 641 MHTCCTSCSVPHNEHTPCCTSWRGSSCLFILLILMEFLVSLWQCRQSKTSLQQGALIRHF 462
Query: 250 LL*CGHP*CIIPFSNFS*SSGFEPLILSVL*FPSDNRELL 131
L *CGHP CIIPF NFS SSGFEPL+ SVL*FPSD++E L
Sbjct: 461 LR*CGHPYCIIPF*NFSYSSGFEPLVFSVL*FPSDSKEPL 342
Score = 195 bits (421), Expect = 4e-049
Identities = 84/98 (85%), Positives = 90/98 (91%)
Frame = +1 / +2
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLM TTIQ R MVQ LM+MRN RKG*C+MGVHIIEG+ *ELLAAMKFLIADTATM
Sbjct: 344 RALCCLMGTTIQRRPMVQILMSMRNFRKG*CSMGVHIIEGNDG*ELLAAMKFLIADTATM 523
Query: 313 KLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDKY 426
KLRIPLKLIK*RGMNFHAMKCSR+YAHCVAL+RR +KY
Sbjct: 524 KLRIPLKLIK*RGMNFHAMKCSRVYAHCVALSRRYNKY 637
Score = 192 bits (413), Expect = 5e-048
Identities = 81/95 (85%), Positives = 88/95 (92%)
Frame = -1 / -3
Query: 425 YLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPS 246
YL +LL SATQ*AY LLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSS+ + PS
Sbjct: 636 YLLYLLLSATQ*AYTLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSHPSFPS 457
Query: 245 IMWTPIVHYPFLKFLIVIRV*TIDLVCIVVSIRQQ 141
IMWTPI+HYPFLKFLI+IR+*TI L+CIVV IRQQ
Sbjct: 456 IMWTPILHYPFLKFLILIRI*TIGLLCIVVPIRQQ 352
Score = 191 bits (412), Expect = 7e-048
Identities = 79/97 (81%), Positives = 83/97 (85%)
Frame = -3 / -2
Query: 426 ILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISF 247
ILV PP QCHTMSI PAALHGVEVHASSFY F*WNS*FHCGSVGNQK HCSKEL ISF
Sbjct: 637 ILVVPPAQCHTMSIHPAALHGVEVHASSFY*F*WNS*FHCGSVGNQKLHCSKELSSVISF 458
Query: 246 YNVDTHSALSLSQISHSHQGLNH*SCLYCSFHQTTES 136
NVDTH+ALSLS+ISH+HQ LNH S LYCS HQT +S
Sbjct: 457 DNVDTHTALSLSEISHTHQDLNHWSSLYCSSHQTAKS 347
Score = 185 bits (399), Expect = 4e-046
Identities = 87/117 (74%), Positives = 97/117 (82%)
Frame = +2 / +3
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*W+LQYR+DQWFK **+*EI ERDNA+WVSTL KEM
Sbjct: 291 VCFCSTWTSQAKCGGICQGLFAV*WELQYREDQWFKS**V*EISERDNAVWVSTLSKEMT 470
Query: 260 HKSSLLQ*NF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGATSMY 430
+SSLLQ*+F*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH* GG TSM+
Sbjct: 471 DESSLLQ*SF*LPTLPQ*N*EFH*N**NEEA*TSTP*SAAGCMLIVWH*AGGTTSMH 641
>gb|CD222882.1|CD222882 CCC1_24_G10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_24_G10_A007 5', mRNA sequence
Length = 659
Score = 202 bits (436), Expect = 3e-051
Identities = 67/131 (51%), Positives = 90/131 (68%)
Frame = +3 / +1
Query: 174 INGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRH 353
+ G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RH
Sbjct: 169 VAGAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRH 348
Query: 354 ELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXX 533
E+PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 349 EIPRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGIC 528
Query: 534 XXXXXENSFHC 566
+N FHC
Sbjct: 529 RTGGVDNFFHC 561
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 509 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 330
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 329 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 204
>gb|AW678519.1|AW678519 WS1_16_A09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 565
Score = 202 bits (435), Expect = 5e-051
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +3
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 174 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 353
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 354 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 533
Query: 540 XXXENSFHC 566
+N FHC
Sbjct: 534 GGVDNFFHC 560
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 508 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 329
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 328 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 203
>gb|BE594074.1|BE594074 WS1_101_H05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 202 bits (435), Expect = 5e-051
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +3
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 15 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 194
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 195 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 374
Query: 540 XXXENSFHC 566
+N FHC
Sbjct: 375 GGVDNFFHC 401
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -2
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 349 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 170
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 169 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 44
>gb|CD223169.1|CD223169 CCC1_26_H01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_H01_A007 5', mRNA sequence
Length = 628
Score = 202 bits (435), Expect = 5e-051
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +3
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 183 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 362
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 363 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 542
Query: 540 XXXENSFHC 566
+N FHC
Sbjct: 543 GGVDNFFHC 569
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 517 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 338
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 337 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 212
>gb|CN134496.1|CN134496 OX1_26_E07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_E07_A002 5', mRNA sequence
Length = 746
Score = 202 bits (435), Expect = 5e-051
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 157 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 336
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 337 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 516
Query: 540 XXXENSFHC 566
+N FHC
Sbjct: 517 GGVDNFFHC 543
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 491 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 312
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 311 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 186
>gb|CN148626.1|CN148626 WOUND1_57_F11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_57_F11_A002 5', mRNA sequence
Length = 895
Score = 202 bits (435), Expect = 5e-051
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +3
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 168 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 347
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 348 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 527
Query: 540 XXXENSFHC 566
+N FHC
Sbjct: 528 GGVDNFFHC 554
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 502 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 323
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 322 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 197
>gb|CD211330.1|CD211330 HS1_59_D10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_59_D10_A012 5', mRNA sequence
Length = 663
Score = 201 bits (434), Expect = 6e-051
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 172 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 351
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 352 PRHEIKKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 531
Query: 540 XXXENSFHC 566
+N FHC
Sbjct: 532 GGVDNFFHC 558
Score = 115 bits (246), Expect = 6e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -2
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 506 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFLISWRGISCRSRGS 327
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 326 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 201
>gb|CX610090.1|CX610090 ANR1_16_C06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C06_A002 5', mRNA sequence
Length = 741
Score = 200 bits (431), Expect = 2e-050
Identities = 66/129 (51%), Positives = 89/129 (68%)
Frame = +3 / +2
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 176 GAGASGVVQMDSGAVQHGCAHYSRGCSVLAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 355
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXX 539
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 356 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRT 535
Query: 540 XXXENSFHC 566
++ FHC
Sbjct: 536 GGVDDFFHC 562
Score = 115 bits (245), Expect = 8e-025
Identities = 56/102 (54%), Positives = 59/102 (57%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 510 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 331
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 330 TSSEFLASLWQWRQAKTWPQQGAKTLHPRL*CAQPCCTAPES 205
>gb|BG556794.1|BG556794 EM1_38_F11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 199 bits (430), Expect(2) = 2e-050
Identities = 66/117 (56%), Positives = 85/117 (72%)
Frame = +3 / +1
Query: 216 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSL 395
G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+PRHE+++V+CSL
Sbjct: 13 GAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEIPRHEIEKVICSL 192
Query: 396 CGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHC 566
C EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+ +N FHC
Sbjct: 193 CSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRTGGVDNFFHC 363
Score = 115 bits (245), Expect = 8e-025
Identities = 55/100 (55%), Positives = 58/100 (58%)
Frame = -2 / -3
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 311 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 132
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 215
EFL SLWQ RQ+K QQGA H L*C P C P
Sbjct: 131 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAP 12
Score = 21.7 bits (41), Expect(2) = 2e-050
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2 / +1
Query: 575 GCCYSIALK 601
GCCYS LK
Sbjct: 373 GCCYSNVLK 399
>gb|BG462809.1|BG462809 EM1_45_H01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 383
Score = 199 bits (430), Expect = 2e-050
Identities = 66/117 (56%), Positives = 85/117 (72%)
Frame = +3 / +1
Query: 216 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSL 395
G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+PRHE+++V+CSL
Sbjct: 13 GAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEIPRHEIEKVICSL 192
Query: 396 CGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHC 566
C EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+ +N FHC
Sbjct: 193 CSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRTGGVDNFFHC 363
Score = 115 bits (245), Expect = 8e-025
Identities = 55/100 (55%), Positives = 58/100 (58%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 311 QWYWPFETSSSKNLHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 132
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 215
EFL SLWQ RQ+K QQGA H L*C P C P
Sbjct: 131 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAP 12
>gb|BF177265.1|BF177265 EM1_1_C01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 191 bits (411), Expect = 1e-047
Identities = 62/113 (54%), Positives = 83/113 (73%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 175 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 354
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 518
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +C FDDDVSK QYHC+
Sbjct: 355 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICXFFDDDVSKGQYHCD 513
Score = 113 bits (241), Expect = 3e-024
Identities = 55/102 (53%), Positives = 58/102 (56%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+ H QKYFPMQ PQL C TSCS+ E T SWRG SC S
Sbjct: 509 QWYWPFETSSSKNXHISQKYFPMQAPQLEQFCCTSCSLEQREQITFSISWRGISCRSRGS 330
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
EFL SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 329 TSSEFLASLWQWRQAKTWPQQGATTLHPRL*CAQPCCTAPES 204
>gb|BM324999.1|BM324999 PIC1_38_E05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 567
Score = 134 bits (288), Expect(3) = 6e-044
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +3 / +2
Query: 318 KNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVS 497
+NS+++D RHE+PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVS
Sbjct: 209 QNSLEVDPRDRHEIPRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVS 388
Query: 498 KQQYHCNXXXXXXXXXXENSFHC 566
QYHC+ +N FHC
Sbjct: 389 XGQYHCDGCGICRTGGVDNFFHC 457
Score = 62.0 bits (129), Expect(3) = 6e-044
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / +1
Query: 231 GCPHYRRRCRIRAPCCNEIFDCRHCHNETK 320
GC HY R C + APCC ++F CRHCHN+ K
Sbjct: 10 GCAHYSRGCSVVAPCCGQVFACRHCHNDAK 99
Score = 21.7 bits (41), Expect(3) = 6e-044
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2 / +2
Query: 575 GCCYSIALK 601
GCCYS LK
Sbjct: 467 GCCYSNVLK 493
>gb|CD212646.1|CD212646 HS1_6_D03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_6_D03_A012 5', mRNA sequence
Length = 622
Score = 128 bits (275), Expect(2) = 2e-043
Identities = 43/67 (64%), Positives = 56/67 (83%)
Frame = +3 / +3
Query: 318 KNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVS 497
+NS+++D RHE+PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVS
Sbjct: 420 QNSLEVDPRDRHEIPRHEIKKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVS 599
Query: 498 KQQYHCN 518
K QYHC+
Sbjct: 600 KGQYHCD 620
Score = 68.4 bits (143), Expect(2) = 2e-043
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETK 320
G+ + + G + +GC HY R C + APCC +IF CRHCHN+ K
Sbjct: 169 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQIFACRHCHNDAK 309
>gb|CN130931.1|CN130931 RHOH1_44_G05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_G05_A002 5', mRNA sequence
Length = 815
Score = 176 bits (379), Expect = 2e-043
Identities = 71/79 (89%), Positives = 73/79 (92%)
Frame = -3 / -2
Query: 555 NSPCLRFYIFHIRCSDTAV*RHHRRRVCTNHRSTSPCKHRN*YILVAPPVQCHTMSIQPA 376
NSP L+F IFHIRCSDTAV*RHHR+RVCT HRSTSPCKH N* ILV PPVQCHTMSIQPA
Sbjct: 814 NSPSLQFCIFHIRCSDTAV*RHHRQRVCTIHRSTSPCKHHN*CILVVPPVQCHTMSIQPA 635
Query: 375 ALHGVEVHASSFYQF*WNS 319
ALHGVEVHASSFYQF*WNS
Sbjct: 634 ALHGVEVHASSFYQF*WNS 578
Score = 171 bits (369), Expect = 6e-042
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3 / +1
Query: 321 NSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSK 500
NSIKIDKMKRHELPRHEVQQVVCSLCGTEQEV+QVCINCGVCMGKYFCGLCKLFDDDVSK
Sbjct: 580 NSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVQQVCINCGVCMGKYFCGLCKLFDDDVSK 759
Query: 501 QQYHCN 518
QQYHCN
Sbjct: 760 QQYHCN 777
Score = 169 bits (364), Expect = 3e-041
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = -1 / -3
Query: 554 ILPASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLL 375
ILP S+S YSTSVAVILLFRDIIV+EFAQ+TEVLPHANT ID YL +LLFSATQ*AYNLL
Sbjct: 813 ILPPSNSAYSTSVAVILLFRDIIVKEFAQSTEVLPHANTTIDAYLLYLLFSATQ*AYNLL 634
Query: 374 HFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIM 240
HFMAWKFMPLHFINFNGIL + +K I + P M
Sbjct: 633 HFMAWKFMPLHFINFNGILVHQ*LIGILKTIIPTHQRSTSQPLTM 499
Score = 164 bits (352), Expect = 1e-039
Identities = 70/79 (88%), Positives = 71/79 (89%)
Frame = +1 / +2
Query: 319 RIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGSTSVVCANSSTMMSL 498
RIPLKLIK*RGMNFHAMKCSRLYAHCVALNRR +KY SI VFAWGSTSV CANS TMMSL
Sbjct: 578 RIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRYNKYASIVVFAWGSTSVDCANSLTMMSL 757
Query: 499 NSSITATDVEYVESEAGRI 555
NSSITATDVEY E E GRI
Sbjct: 758 NSSITATDVEYAELEGGRI 814
Score = 162 bits (348), Expect = 5e-039
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q*YCCLETSSSKSLH PQKYFPMQTPQL+HTC TSCSVPHNEHTTCCTSWRGSSCLFILS
Sbjct: 773 Q*YCCLETSSSKSLHNPQKYFPMQTPQLMHTCCTSCSVPHNEHTTCCTSWRGSSCLFILS 594
Query: 334 ILMEF 320
ILMEF
Sbjct: 593 ILMEF 579
Score = 160 bits (344), Expect = 2e-038
Identities = 71/79 (89%), Positives = 73/79 (92%)
Frame = +2 / +3
Query: 320 EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGATSMYQLRCLHGEVLLWFVQTLRR*CL* 499
EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGG TSM+QL CLHGEVLLW VQTL R*CL*
Sbjct: 579 EFH*N**NEEA*TSTP*SAAGCMLIVWH*TGGTTSMHQLWCLHGEVLLWIVQTL*R*CL* 758
Query: 500 TAVSLQRMWNM*NRRQGEF 556
TAVSLQRMWNM N R+GEF
Sbjct: 759 TAVSLQRMWNMQNWREGEF 815
>gb|BG649153.1|BG649153 EM1_56_H02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 170 bits (365), Expect = 2e-041
Identities = 57/107 (53%), Positives = 76/107 (71%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + G + +GC HY R C APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 169 GAGASGVVHMDSGAVQHGCAHYSRGCSDVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 348
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSK 500
PRHE+++V+ SLC EQ+VRQ C NCG CMG+YFC +CK FDDDVS+
Sbjct: 349 PRHEIEKVI*SLCSKEQDVRQNCSNCGACMGRYFCEICKFFDDDVSQ 489
Score = 113 bits (242), Expect = 2e-024
Identities = 53/96 (55%), Positives = 57/96 (59%)
Frame = -2 / -2
Query: 496 ETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFL 317
ETSSSK+LH QKY PMQ PQL CRTSCS+ + T SWRG SC S EFL
Sbjct: 485 ETSSSKNLHISQKYLPMQAPQLEQFCRTSCSLEQRDQITFSISWRGISCRSRGSTSSEFL 306
Query: 316 VSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
SLWQ RQ+K QQGA H L*C P C P S
Sbjct: 305 ASLWQWRQAKTWPQQGATSLHPRL*CAQPCCTAPES 198
>gb|AW672118.1|AW672118 LG1_357_F09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 547
Score = 110 bits (235), Expect(2) = 1e-040
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = +3 / +1
Query: 348 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 527
RH + R +V++VVC LC TEQ V QVCI+CGV MG+YFC +CK +DDD+ K QYHCN
Sbjct: 223 RHTIVRQDVKKVVCLLCETEQPVSQVCISCGVNMGEYFCDICKFYDDDIGKGQYHCNDCG 402
Query: 528 XXXXXXXENSFHCSK 572
E FHC K
Sbjct: 403 ICRVGGKEKFFHCVK 447
Score = 77.1 bits (162), Expect(2) = 1e-040
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3 / +1
Query: 216 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNS 326
G M +GC HYRRRC+I APCCN++F CRHCHNE S
Sbjct: 106 GKMEHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 216
>gb|CD211102.1|CD211102 HS1_61_B11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_61_B11_A012 3', mRNA sequence
Length = 754
Score = 166 bits (357), Expect = 3e-040
Identities = 59/65 (90%), Positives = 63/65 (96%)
Frame = +3 / +2
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 311
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FDCRHCHN
Sbjct: 560 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFDCRHCHN 739
Query: 312 ETKNS 326
ETKNS
Sbjct: 740 ETKNS 754
Score = 140 bits (301), Expect = 1e-032
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = -3 / -3
Query: 324 NS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQISHSHQGLNH*SCLYCSFHQT 145
NS*FHCGSVGNQK HCSKELLCGISFYNVDTH+ALSLS+ISH+HQ LNH*S LYCSFHQT
Sbjct: 752 NS*FHCGSVGNQKLHCSKELLCGISFYNVDTHTALSLSEISHTHQDLNH*SSLYCSFHQT 573
Query: 144 TES 136
+S
Sbjct: 572 AKS 564
Score = 135 bits (290), Expect = 5e-031
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = -1 / -1
Query: 326 GILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIRV*TIDLVCIVVSIR 147
GILSFIVAVSAIKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR+*TIDL+CIVVSIR
Sbjct: 754 GILSFIVAVSAIKNFIAARSSYAASPSIMWTPILHYPFLKFLILIRI*TIDLLCIVVSIR 575
Query: 146 QQ 141
QQ
Sbjct: 574 QQ 569
Score = 134 bits (287), Expect = 1e-030
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +1 / +3
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATM 312
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLIADTATM
Sbjct: 561 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLIADTATM 740
Query: 313 KLRI 324
KLRI
Sbjct: 741 KLRI 752
Score = 132 bits (282), Expect = 6e-030
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = -2 / -2
Query: 325 EFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSVL*FPSD 146
EFLVSLWQCRQSK SLQQGALMRHLLL*CGHP CIIPF NFS SSGFEPLI SVL*FPSD
Sbjct: 753 EFLVSLWQCRQSKTSLQQGALMRHLLL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*FPSD 574
Query: 145 NRELL 131
++E L
Sbjct: 573 SKEPL 559
Score = 129 bits (277), Expect = 3e-029
Identities = 60/82 (73%), Positives = 67/82 (81%)
Frame = +2 / +1
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 508 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 687
Query: 260 HKSSLLQ*NF*LPTLPQ*N*EF 325
HKSSLLQ*+F*LPTLPQ*N*EF
Sbjct: 688 HKSSLLQ*SF*LPTLPQ*N*EF 753
>gb|CD211692.1|CD211692 HS1_63_G09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_63_G09_A012 5', mRNA sequence
Length = 597
Score = 111 bits (238), Expect(2) = 3e-038
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 318 KNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDV 494
+NS+++D RHE+PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDV
Sbjct: 420 QNSLEVDPRDRHEIPRHEIKKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDV 596
Score = 68.0 bits (142), Expect(2) = 3e-038
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETK 320
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ K
Sbjct: 169 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAK 309
>gb|BG487477.1|BG487477 EM1_65_E06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 461
Score = 157 bits (338), Expect = 1e-037
Identities = 50/95 (52%), Positives = 69/95 (72%)
Frame = +3 / +2
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 173 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 352
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFC 464
PRHE+++V+CSLC EQ+V+Q C NCG CMGKYFC
Sbjct: 353 PRHEIEKVICSLCSKEQDVQQNCSNCGACMGKYFC 457
>gb|CD462309.1|CD462309 SA1_40_H09.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_40_H09_A002 5', mRNA sequence
Length = 762
Score = 134 bits (287), Expect = 1e-030
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +3 / +3
Query: 132 KSSLLSDGNYNTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFD 293
K SLLSDGNYNT+KINGSNPD+YEKF+KGIM YGCPHYRRRCRIRAPCCNE+FD
Sbjct: 600 KGSLLSDGNYNTEKINGSNPDEYEKFQKGIMQYGCPHYRRRCRIRAPCCNEVFD 761
Score = 116 bits (247), Expect = 4e-025
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -3 / -1
Query: 294 NQKFHCSKELLCGISFYNVDTHSALSLSQISHSHQGLNH*SCLYCSFHQTTES 136
NQK HCSKELLCGISFYNVDTH+ALSLS+ISH+HQ LNH*S LYCSFHQT +S
Sbjct: 762 NQKLHCSKELLCGISFYNVDTHTALSLSEISHTHQDLNH*SSLYCSFHQTAKS 604
Score = 113 bits (242), Expect = 2e-024
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = -1 / -2
Query: 293 IKNFIAARSSYAASPSIMWTPIVHYPFLKFLIVIRV*TIDLVCIVVSIRQQ 141
IKNFIAARSSYAASPSIMWTPI+HYPFLKFLI+IR+*TIDL+CIVVSIRQQ
Sbjct: 761 IKNFIAARSSYAASPSIMWTPILHYPFLKFLILIRI*TIDLLCIVVSIRQQ 609
Score = 112 bits (240), Expect = 4e-024
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +1 / +1
Query: 133 RALCCLMETTIQTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLI 294
RALCCLMETTIQ RSMVQ LM+MRN RKG*C+MGVHIIEGDAA*ELLAAMKFLI
Sbjct: 601 RALCCLMETTIQRRSMVQILMSMRNFRKG*CSMGVHIIEGDAA*ELLAAMKFLI 762
Score = 106 bits (226), Expect = 3e-022
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +2 / +2
Query: 80 ISLCSTATAAGTRRRLLQELSVV*WKLQYRQDQWFKP**L*EI*ERDNALWVSTL*KEMP 259
+ CST T+ + Q L V*WKLQYR+DQWFK **+*EI ERDNA+WVSTL*KEMP
Sbjct: 548 VCFCSTWTSQAKCGGICQGLFAV*WKLQYREDQWFKS**V*EISERDNAVWVSTL*KEMP 727
Query: 260 HKSSLLQ*NF* 292
HKSSLLQ*+F*
Sbjct: 728 HKSSLLQ*SF* 760
Score = 103 bits (220), Expect = 2e-021
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = -2 / -3
Query: 292 SKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSVL*FPSDNRELL 131
SK SLQQGALMRHLLL*CGHP CIIPF NFS SSGFEPLI SVL*FPSD++E L
Sbjct: 760 SKTSLQQGALMRHLLL*CGHPYCIIPF*NFSYSSGFEPLIFSVL*FPSDSKEPL 599
>gb|CB928016.1|CB928016 ABA1_35_B03.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_35_B03_A012 5', mRNA sequence
Length = 427
Score = 126 bits (270), Expect = 3e-028
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = +3 / +2
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++ RHE+
Sbjct: 170 GAGASGVVQMDSGAVQHGCAHYSRGCIVVAPCCGQVFACRHCHNDAKNSLEVYPRDRHEI 349
Query: 360 PRHEVQQVVCSLCGTEQEVRQVCINC 437
PRHE+++V+CSLC EQ+V Q C NC
Sbjct: 350 PRHEIKKVICSLCSKEQDVLQNCSNC 427
>gb|CD206399.1|CD206399 HS1_22_H09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_22_H09_A012 5', mRNA sequence
Length = 553
Score = 78.0 bits (164), Expect(2) = 2e-027
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 318 KNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCM 449
+NS+++D RHE+PRHE+++V+CSLC EQ+V+Q C NCG CM
Sbjct: 420 QNSLEVDPRDRHEIPRHEIKKVICSLCSXEQDVQQNCSNCGACM 551
Score = 65.7 bits (137), Expect(2) = 2e-027
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNE 314
G+ + + G + +GC HY R C + APCC ++F CRHCHN+
Sbjct: 169 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHND 303
>gb|BE592989.1|BE592989 WS1_93_A01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 535
Score = 105 bits (225), Expect(3) = 5e-026
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +3 / +2
Query: 375 QQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXEN 554
++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+ +N
Sbjct: 50 RKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRTGGVDN 229
Query: 555 SFHC 566
FHC
Sbjct: 230 FFHC 241
Score = 29.9 bits (59), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3 / +3
Query: 330 KIDKMKRHELPRHEVQQ 380
++D RHE+PRHE+++
Sbjct: 6 RVDPRDRHEIPRHEIEK 56
Score = 21.7 bits (41), Expect(3) = 5e-026
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2 / +2
Query: 575 GCCYSIALK 601
GCCYS LK
Sbjct: 251 GCCYSNVLK 277
>gb|CD229180.1|CD229180 CCC1_13_B11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_B11_A007 5', mRNA sequence
Length = 654
Score = 106 bits (227), Expect = 2e-022
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -3 / -1
Query: 573 LLNSGRNSPCLRFYIFHIRCSDTAV*RHHRRRVCTNHRSTSPCKHRN*YIL 421
+LNSGRNSP L+F IFHIRCSDTAV*RHHR+RVCT HRSTSPCKH N* IL
Sbjct: 159 ILNSGRNSPSLQFCIFHIRCSDTAV*RHHRQRVCTIHRSTSPCKHHN*CIL 7
Score = 105 bits (225), Expect(2) = 6e-025
Identities = 39/51 (76%), Positives = 40/51 (78%)
Frame = +3 / +3
Query: 420 QVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCSK 572
+VCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN EN FHCSK
Sbjct: 6 EVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNGCGICRIGGRENFFHCSK 158
Score = 29.0 bits (57), Expect(2) = 6e-025
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2 / +3
Query: 554 FLPLFKSGCCYSIALK 601
F K GCCYSIALK
Sbjct: 141 FFHCSKCGCCYSIALK 188
>gb|CW356366.1|CW356366 fsbb001f021g14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f021g14, DNA
sequence
Length = 775
Score = 75.3 bits (158), Expect(4) = 2e-024
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +3 / +1
Query: 234 CPHYRRRCRIRAPCCNEIFDCRHCHNETK 320
C HYRR+C+IRAPCC E+FDCRHCHNE K
Sbjct: 7 CVHYRRKCKIRAPCCGEVFDCRHCHNEAK 93
Score = 43.2 bits (88), Expect(4) = 2e-024
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / +2
Query: 411 EVRQVCINCGVCMGKYFCGLCKL 479
+V+Q C NCG C+GKYFCG +L
Sbjct: 695 QVQQDCSNCGACLGKYFCGEMQL 763
Score = 27.2 bits (53), Expect(4) = 2e-024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 378 QVVCSLCGTEQEV 416
QV+CSLC EQ+V
Sbjct: 583 QVICSLCNKEQDV 621
Score = 24.9 bits (48), Expect(4) = 2e-024
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 318 KNSIKIDKMKRHELPRHEVQQV 383
++S+++ RH +PRH+++ V
Sbjct: 208 QDSLEVSIQDRHVVPRHDIKLV 273
>gb|CD229448.1|CD229448 CCC1_15_C04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_C04_A007 5', mRNA sequence
Length = 623
Score = 107 bits (228), Expect(2) = 1e-022
Identities = 38/68 (55%), Positives = 45/68 (66%)
Frame = +3 / +2
Query: 363 RHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXX 542
R +V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+
Sbjct: 215 RRRAARVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRTG 394
Query: 543 XXENSFHC 566
+N FHC
Sbjct: 395 GVDNFFHC 418
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2 / +2
Query: 575 GCCYSIALK 601
GCCYS LK
Sbjct: 428 GCCYSNVLK 454
>gb|BE367552.1|BE367552 PI1_9_C11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 471
Score = 105 bits (225), Expect(2) = 2e-022
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +3 / +3
Query: 375 QQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXEN 554
++V+CSLC EQ+V+Q C NCG CMGKYFC +CK FDDDVSK QYHC+ +N
Sbjct: 21 RKVICSLCSKEQDVQQNCSNCGACMGKYFCEICKFFDDDVSKGQYHCDGCGICRTGGVDN 200
Query: 555 SFHC 566
FHC
Sbjct: 201 FFHC 212
Score = 21.7 bits (41), Expect(2) = 2e-022
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 575 GCCYSIALK 601
GCCYS LK
Sbjct: 222 GCCYSNVLK 248
>gb|CD227619.1|CD227619 CCC1_52_F07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_F07_A007 5', mRNA sequence
Length = 601
Score = 102 bits (217), Expect = 6e-021
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +3 / +2
Query: 174 INGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRH 353
+ G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RH
Sbjct: 185 VAGAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRH 364
Query: 354 ELPRHEVQQV 383
E+PRHE+++V
Sbjct: 365 EIPRHEIEKV 394
>gb|BE358492.1|BE358492 DG1_30_E09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 101 bits (216), Expect = 8e-021
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3 / +1
Query: 180 GSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 359
G+ + + G + +GC HY R C + APCC ++F CRHCHN+ KNS+++D RHE+
Sbjct: 163 GAGASGVVQMDSGAVQHGCAHYSRGCSVVAPCCGQVFACRHCHNDAKNSLEVDPRDRHEI 342
Query: 360 PRHEVQQV 383
PRHE+++V
Sbjct: 343 PRHEIEKV 366
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 751,424,817
Number of Sequences: 832831
Number of extensions: 11950060
Number of successful extensions: 108032
Number of sequences better than 1.0e-020: 41
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17588037411
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)