TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191640.2.1
(923 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 520 e-146
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 486 e-136
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 476 e-133
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 465 e-130
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 416 e-120
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 391 e-107
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 248 3e-092
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 326 2e-088
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 281 3e-087
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 281 4e-085
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 313 3e-084
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 240 4e-082
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 281 2e-080
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 267 2e-078
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 215 3e-078
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 292 7e-078
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 178 6e-074
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 240 1e-072
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 166 3e-070
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 162 3e-069
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 215 4e-069
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 261 9e-069
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 218 1e-068
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 158 6e-068
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 173 4e-067
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 150 1e-065
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 150 1e-065
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 149 2e-065
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 224 2e-062
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 236 4e-061
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 129 2e-059
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 213 5e-058
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 226 5e-058
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 224 1e-057
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 119 1e-053
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 210 2e-053
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 210 2e-053
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 210 2e-053
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 210 2e-053
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 210 2e-053
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 200 3e-050
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 122 3e-050
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 199 5e-050
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 198 1e-049
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 196 5e-049
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 125 6e-049
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 121 1e-048
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 89 9e-046
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 121 2e-045
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 121 2e-045
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 123 3e-043
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 103 7e-043
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 142 3e-041
gb|CW401940.1|CW401940 fsbb001f093a03f0 Sorghum methylation... 79 5e-041
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 169 7e-041
gb|BE597262.1|BE597262 PI1_70_B02.g1_A002 Pathogen induced ... 84 9e-038
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 158 1e-037
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 157 3e-037
gb|CD213604.1|CD213604 HS1_52_B12.b1_A012 Heat-shocked seed... 82 4e-037
gb|CD462003.1|CD462003 SA1_36_H06.b1_A002 Salicylic acid-tr... 82 4e-037
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 129 1e-036
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 154 2e-036
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 121 1e-035
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 121 4e-035
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 121 4e-035
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 149 6e-035
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 112 6e-035
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 112 6e-035
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 73 8e-035
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 121 1e-034
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 121 1e-034
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 123 1e-034
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 148 1e-034
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 119 2e-034
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 147 2e-034
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 118 3e-034
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 146 5e-034
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 146 5e-034
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 118 1e-033
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 121 1e-033
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 112 2e-033
gb|BI098131.1|BI098131 IP1_32_D12.g1_A002 Immature pannicle... 69 3e-033
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 78 3e-033
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 143 4e-033
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 142 9e-033
gb|CL175908.1|CL175908 104_381_10892772_148_31764_372 Sorgh... 78 3e-032
gb|CW191731.1|CW191731 104_613_11178652_148_36941_002 Sorgh... 78 3e-032
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 121 6e-032
gb|BG357591.1|BG357591 OV2_31_G11.g1_A002 Ovary 2 (OV2) Sor... 138 2e-031
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 110 2e-031
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 122 4e-031
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 106 1e-030
gb|CW070897.1|CW070897 104_323_10591301_114_30471 Sorghum m... 74 2e-030
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 122 3e-030
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 121 7e-030
gb|CD212571.1|CD212571 HS1_6_F12.b1_A012 Heat-shocked seedl... 67 1e-029
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 127 2e-028
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 127 2e-028
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 90 3e-028
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 124 2e-027
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 123 4e-027
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 123 4e-027
gb|CX609536.1|CX609536 ANR1_13_F11.b1_A002 Anaerobic roots ... 90 5e-027
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 119 5e-027
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 121 2e-026
gb|CF430289.1|CF430289 PH1_27_G01.b1_A002 Phosphorous-defic... 58 2e-026
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 109 2e-026
gb|CW232350.1|CW232350 104_685_11212772_116_37364_080 Sorgh... 67 3e-026
gb|CW030834.1|CW030834 104_259_10500452_116_30398 Sorghum m... 86 6e-026
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 118 1e-025
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 118 1e-025
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 117 2e-025
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 117 2e-025
gb|CF483069.1|CF483069 POL1_11_C05.b1_A002 Pollen Sorghum b... 116 7e-025
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 115 9e-025
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 56 7e-024
gb|BG239969.1|BG239969 OV1_31_D01.g1_A002 Ovary 1 (OV1) Sor... 112 9e-024
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 101 9e-024
gb|CW194907.1|CW194907 104_618_11180352_116_36796_092 Sorgh... 74 2e-023
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 109 8e-023
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 105 1e-021
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 104 2e-021
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 104 2e-021
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 104 3e-021
>gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 712
Score = 520 bits (1129), Expect = e-146
Identities = 210/235 (89%), Positives = 227/235 (96%)
Frame = +1 / -3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TNGT+SGIKLLNSKFFHINID SK+ITVKDVNITAP DVENTDGVHVG S+ V ITNSTI
Sbjct: 707 TNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTI 528
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
GTGDDC+S+GPGSDGVMVNNI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNGV
Sbjct: 527 GTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGV 348
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTF 546
RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCP+KVCPGK+S+SSHV +KDVTF
Sbjct: 347 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTF 168
Query: 547 RNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKG 711
RNI+GTSSTP+A+SLLCS++QPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKG
Sbjct: 167 RNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKG 3
Score = 430 bits (934), Expect = e-119
Identities = 192/237 (81%), Positives = 196/237 (82%)
Frame = -1 / +1
Query: 713 LPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTS 534
LPLAVPLALLHTAMVLLFLPAYST TSMS+TPLHGC EQSRL A GVDDVP MLR VTS
Sbjct: 1 LPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTS 180
Query: 533 LMETCEELLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLV 354
L T EE L LPG TF GQKYWSMMMG ATSSILMFSKVR DAVSTDSASSYDLMRTPLV
Sbjct: 181 LTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLV 360
Query: 353 VFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVEL 174
VFLSTQ RPRQP LMPCPGPQ+MLFTMTPSLPGP E QSSPVPMVEL
Sbjct: 361 VFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVEL 540
Query: 173 VMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
VM TL D PTWTPSVFSTS GAVMFTSFTVM E S+LMWKNLELSSLIPE VPLV+
Sbjct: 541 VMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPETVPLVT 711
Score = 207 bits (447), Expect(3) = 4e-061
Identities = 97/160 (60%), Positives = 105/160 (65%)
Frame = -3 / +3
Query: 711 SLGGSLGVAAHSHXXXXXXXXXXXDIDERDAAARLRLGAEQXXXXXXXXXXXDVAEGDVL 532
+LGG+LGVAAH H IDER AAA L L AEQ DVAE DVL
Sbjct: 3 ALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRARDVAERDVL 182
Query: 531 DGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGRREHRLGILVRLDAHAVGG 352
D DMRGVA LAGA LLGAEVLVDDDGV HLLHPDVLEG+M RR+HRLG+LVRLDAHAV G
Sbjct: 183 DDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRLDAHAVSG 362
Query: 351 VPKHAIPHRXXXXXXXXXXXXXXXHTDALPGATGDVVHHD 232
+ +HA+PHR DALPGA DVVHHD
Sbjct: 363 LLEHAVPHRHVGHVLLILVAA*AADADALPGAADDVVHHD 482
Score = 116 bits (247), Expect(4) = 2e-041
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +3 / -2
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 360 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 181
Query: 534 GRHLPQHLRHVVHARSRQPALLRDAAV 614
GRH+PQH HVVHA QPALL A+
Sbjct: 180 GRHVPQHHGHVVHATGHQPALLAVTAM 100
Score = 50.1 bits (103), Expect(4) = 2e-041
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 234 HGEQHHLWPRAGHQCGLPRPLQ 299
HGEQHHL PRAGHQ LPRPLQ
Sbjct: 480 HGEQHHLRPRAGHQHRLPRPLQ 415
Score = 46.0 bits (94), Expect(3) = 4e-061
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / +2
Query: 85 *CP*KCRC*CGRIWS*VV*FRK*CRWSR 2
*C K R *CGR WS*VV*F++ CRWSR
Sbjct: 629 *CSLKRRY*CGRTWS*VV*FQRQCRWSR 712
Score = 32.7 bits (65), Expect(4) = 2e-041
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 669 DHGCVQQRQGNRQGK 713
DHG VQQRQG+RQG+
Sbjct: 45 DHGRVQQRQGHRQGQ 1
Score = 32.2 bits (64), Expect(4) = 2e-041
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 3 RDQRHYFRN*TTQLQILP 56
RDQRH N TTQLQ+LP
Sbjct: 711 RDQRHCLWNQTTQLQVLP 658
Score = 22.1 bits (42), Expect(3) = 4e-061
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3 / +3
Query: 165 YIGGPADMXXXXXXXXXXXXXVHILHGDVL 76
++GG ++M VH+LH DVL
Sbjct: 549 HLGGHSNMDAVRVLNVPRRGDVHVLHRDVL 638
>gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 711
Score = 486 bits (1055), Expect = e-136
Identities = 195/226 (86%), Positives = 216/226 (95%)
Frame = +1 / -2
Query: 94 DVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGI 273
DVNITAP DVENTDGVHVG S+ V ITNSTIGTGDDC+S+GPGSDGVMVNNI CGPGQGI
Sbjct: 710 DVNITAPGDVENTDGVHVGMSTKVSITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGI 531
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 453
S+GCLGRYKDEKDV+DVTVRDCVL+ TTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN
Sbjct: 530 SIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 351
Query: 454 PIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLI 633
PIIIDQYFCP+KVCPGK+S+SSHV +KDVTFRNI+GTSSTP+A+SLLCS++QPCSGVSLI
Sbjct: 350 PIIIDQYFCPEKVCPGKKSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLI 171
Query: 634 DVNVEYAGKNNKTMAVCSNAKGTAKGSLQALDCLV*SMTLHLHAFF 771
DVNVEYAGKNNKTMAVCSNAKGTAKGS++AL CL *+M++HLHA +
Sbjct: 170 DVNVEYAGKNNKTMAVCSNAKGTAKGSVEALACLA*AMSMHLHACY 33
Score = 384 bits (833), Expect = e-105
Identities = 173/218 (79%), Positives = 176/218 (80%)
Frame = -1 / +1
Query: 746 IDQTRQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVD 567
I Q R +RA LPLAVPLALLHTAMVLLFLPAYST TSMS+TPLHGC EQSRL A GVD
Sbjct: 58 IAQARHARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVD 237
Query: 566 DVPEMLRKVTSLMETCEELLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSA 387
DVP MLR VTSL T EE L LPG TF GQKYWSMMMG ATSSILMFSKVR DAVSTDSA
Sbjct: 238 DVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSA 417
Query: 386 SSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPME 207
SSYDLMRTPLVVFLSTQ RPRQP LMPCPGPQ+MLFTMTPSLPGP E
Sbjct: 418 SSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTE 597
Query: 206 TQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTS 93
QSSPVPMVELVM TL D PTWTPSVFSTS GAVMFTS
Sbjct: 598 MQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTS 711
Score = 237 bits (513), Expect = 1e-061
Identities = 109/178 (61%), Positives = 119/178 (66%)
Frame = -3 / +3
Query: 765 CMQMQGHRSDEAIQGLEASLGGSLGVAAHSHXXXXXXXXXXXDIDERDAAARLRLGAEQX 586
CMQM HRS +A QGL+A+LGG+LGVAAH H IDER AAA L L AEQ
Sbjct: 39 CMQMHAHRSGQACQGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQA 218
Query: 585 XXXXXXXXXXDVAEGDVLDGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGR 406
DVAE DVLD DMRGVA LAGA LLGAEVLVDDDGV HLLHPDVLEG+M R
Sbjct: 219 DGLWRGRRARDVAERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRR 398
Query: 405 REHRLGILVRLDAHAVGGVPKHAIPHRXXXXXXXXXXXXXXXHTDALPGATGDVVHHD 232
R+HRLG+LVRLDAHAV G+ +HA+PHR DALPGA DVVHHD
Sbjct: 399 RQHRLGVLVRLDAHAVSGLLEHAVPHRHVGHVLLILVAA*AADADALPGAADDVVHHD 572
Score = 116 bits (247), Expect(3) = 5e-047
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +3 / -1
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 450 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 271
Query: 534 GRHLPQHLRHVVHARSRQPALLRDAAV 614
GRH+PQH HVVHA QPALL A+
Sbjct: 270 GRHVPQHHGHVVHATGHQPALLAVTAM 190
Score = 67.0 bits (140), Expect(3) = 2e-023
Identities = 28/37 (75%), Positives = 28/37 (75%)
Frame = +2 / -3
Query: 329 CGIACLGTPPTACASSRTRMPSLCSRRPISPSRTSGW 439
CG AC P TACASSRTR PSLC RR I PSRTSGW
Sbjct: 475 CGTACSRRPLTACASSRTRTPSLC*RRRI*PSRTSGW 365
Score = 62.0 bits (129), Expect(3) = 5e-047
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 674 WLCAATPREPPREASRPWIASSDR*PCICMH 766
W CAATPR PPR ASRPW A +R* CICMH
Sbjct: 130 WPCAATPRAPPRAASRPWHAWPER*ACICMH 38
Score = 55.1 bits (114), Expect(3) = 2e-023
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / -1
Query: 669 DHGCVQQRQGNRQGKPPGPGLPRLIDDLAFACIL 770
DHG VQQRQG+RQG+ GPG+P L D+ A AC+L
Sbjct: 135 DHGRVQQRQGHRQGQRRGPGMPGLSDEHASACML 34
Score = 50.1 bits (103), Expect(3) = 5e-047
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 234 HGEQHHLWPRAGHQCGLPRPLQ 299
HGEQHHL PRAGHQ LPRPLQ
Sbjct: 570 HGEQHHLRPRAGHQHRLPRPLQ 505
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 233 SW*TTSPVAPGRAS 274
SW*TTS APGRAS
Sbjct: 571 SW*TTSSAAPGRAS 530
>gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 660
Score = 476 bits (1034), Expect = e-133
Identities = 192/220 (87%), Positives = 210/220 (95%)
Frame = +1 / +1
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
T+SGIKLLNSKFFHINID SK+ITVKDVNITAP DVENTDGVHVG S+ V ITNSTIGTG
Sbjct: 1 TVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTIGTG 180
Query: 196 DDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIK 375
DDC+S+GPGSDGVMVNNI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNGVRIK
Sbjct: 181 DDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIK 360
Query: 376 SYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFRNI 555
SYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCP+KVCPGK+S+SSHV +KDVTFRNI
Sbjct: 361 SYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTFRNI 540
Query: 556 SGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTM 675
+GTSSTP+A+SLLCS++QPCSGVSLIDVNVEYAGK +TM
Sbjct: 541 TGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKKQQTM 660
Score = 388 bits (842), Expect = e-107
Identities = 173/218 (79%), Positives = 176/218 (80%)
Frame = -1 / -2
Query: 674 MVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCEELLRLPG 495
MV FLPAYST TSMS+TPLHGC EQSRL A GVDDVP MLR VTSL T EE L LPG
Sbjct: 659 MVCCFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSLTMT*EESLFLPG 480
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
TF GQKYWSMMMG ATSSILMFSKVR DAVSTDSASSYDLMRTPLVVFLSTQ
Sbjct: 479 HTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSV 300
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
RPRQP LMPCPGPQ+MLFTMTPSLPGP E QSSPVPMVELVM TL D PTWTP
Sbjct: 299 TSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTP 120
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPE 21
SVFSTS GAVMFTSFTVM E S+LMWKNLELSSLIPE
Sbjct: 119 SVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPE 6
Score = 187 bits (402), Expect(3) = 6e-051
Identities = 87/135 (64%), Positives = 93/135 (68%)
Frame = -3 / -1
Query: 636 IDERDAAARLRLGAEQXXXXXXXXXXXDVAEGDVLDGDMRGVASLAGADLLGAEVLVDDD 457
IDER AAA L L AEQ DVAE DVLD DMRGVA LAGA LLGAEVLVDDD
Sbjct: 621 IDERHAAAWL*LRAEQADGLWRGRRARDVAERDVLDDDMRGVALLAGAHLLGAEVLVDDD 442
Query: 456 GVGHLLHPDVLEGEMGRREHRLGILVRLDAHAVGGVPKHAIPHRXXXXXXXXXXXXXXXH 277
GV HLLHPDVLEG+M RR+HRLG+LVRLDAHAV G+ +HA+PHR
Sbjct: 441 GVRHLLHPDVLEGQMRRRQHRLGVLVRLDAHAVSGLLEHAVPHRHVGHVLLILVAA*AAD 262
Query: 276 TDALPGATGDVVHHD 232
DALPGA DVVHHD
Sbjct: 261 ADALPGAADDVVHHD 217
Score = 116 bits (247), Expect(2) = 5e-034
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +3 / +3
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 339 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 518
Query: 534 GRHLPQHLRHVVHARSRQPALLRDAAV 614
GRH+PQH HVVHA QPALL A+
Sbjct: 519 GRHVPQHHGHVVHATGHQPALLAVTAM 599
Score = 50.1 bits (103), Expect(2) = 5e-034
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 234 HGEQHHLWPRAGHQCGLPRPLQ 299
HGEQHHL PRAGHQ LPRPLQ
Sbjct: 219 HGEQHHLRPRAGHQHRLPRPLQ 284
Score = 32.2 bits (64), Expect(3) = 6e-051
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 85 *CP*KCRC*CGRIWS*VV*FRK 20
*C K R *CGR WS*VV*F++
Sbjct: 70 *CSLKRRY*CGRTWS*VV*FQR 5
Score = 22.1 bits (42), Expect(3) = 6e-051
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3 / -1
Query: 165 YIGGPADMXXXXXXXXXXXXXVHILHGDVL 76
++GG ++M VH+LH DVL
Sbjct: 150 HLGGHSNMDAVRVLNVPRRGDVHVLHRDVL 61
>gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227944, DNA
sequence
Length = 663
Score = 465 bits (1009), Expect = e-130
Identities = 187/212 (88%), Positives = 204/212 (96%)
Frame = +1 / +3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TNGT+SGIKLLNSKFFHINID SK+ITVKDVNITAP DVENTDGVHVG S+ V ITNSTI
Sbjct: 27 TNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTI 206
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
GTGDDC+S+GPGSDGVMVNNI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNGV
Sbjct: 207 GTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGV 386
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTF 546
RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCP+KVCPGK+S+SSHV +KDVTF
Sbjct: 387 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTF 566
Query: 547 RNISGTSSTPEAVSLLCSETQPCSGVSLIDVN 642
RNI+GTSSTP+A+SLLCS++QPCSGVSLIDVN
Sbjct: 567 RNITGTSSTPQAISLLCSQSQPCSGVSLIDVN 662
Score = 377 bits (817), Expect = e-103
Identities = 168/212 (79%), Positives = 172/212 (81%)
Frame = -1 / -3
Query: 638 TSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCEELLRLPGQTFWGQKYWSMM 459
TSMS+TPLHGC EQSRL A GVDDVP MLR VTSL T EE L LPG TF GQKYWSMM
Sbjct: 658 TSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMM 479
Query: 458 MGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQP 279
MG ATSSILMFSKVR DAVSTDSASSYDLMRTPLVVFLSTQ RPRQP
Sbjct: 478 MGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQP 299
Query: 278 TLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMF 99
LMPCPGPQ+MLFTMTPSLPGP E QSSPVPMVELVM TL D PTWTPSVFSTS GAVMF
Sbjct: 298 MLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMF 119
Query: 98 TSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
TSFTVM E S+LMWKNLELSSLIPE VPLV+
Sbjct: 118 TSFTVMFFEASILMWKNLELSSLIPETVPLVT 23
Score = 187 bits (402), Expect(3) = 5e-055
Identities = 87/135 (64%), Positives = 93/135 (68%)
Frame = -3 / -2
Query: 636 IDERDAAARLRLGAEQXXXXXXXXXXXDVAEGDVLDGDMRGVASLAGADLLGAEVLVDDD 457
IDER AAA L L AEQ DVAE DVLD DMRGVA LAGA LLGAEVLVDDD
Sbjct: 656 IDERHAAAWL*LRAEQADGLWRGRRARDVAERDVLDDDMRGVALLAGAHLLGAEVLVDDD 477
Query: 456 GVGHLLHPDVLEGEMGRREHRLGILVRLDAHAVGGVPKHAIPHRXXXXXXXXXXXXXXXH 277
GV HLLHPDVLEG+M RR+HRLG+LVRLDAHAV G+ +HA+PHR
Sbjct: 476 GVRHLLHPDVLEGQMRRRQHRLGVLVRLDAHAVSGLLEHAVPHRHVGHVLLILVAA*AAD 297
Query: 276 TDALPGATGDVVHHD 232
DALPGA DVVHHD
Sbjct: 296 ADALPGAADDVVHHD 252
Score = 116 bits (247), Expect(3) = 4e-037
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +3 / +2
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 374 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 553
Query: 534 GRHLPQHLRHVVHARSRQPALLRDAAV 614
GRH+PQH HVVHA QPALL A+
Sbjct: 554 GRHVPQHHGHVVHATGHQPALLAVTAM 634
Score = 50.1 bits (103), Expect(3) = 4e-037
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 234 HGEQHHLWPRAGHQCGLPRPLQ 299
HGEQHHL PRAGHQ LPRPLQ
Sbjct: 254 HGEQHHLRPRAGHQHRLPRPLQ 319
Score = 46.0 bits (94), Expect(3) = 5e-055
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -1
Query: 85 *CP*KCRC*CGRIWS*VV*FRK*CRWSR 2
*C K R *CGR WS*VV*F++ CRWSR
Sbjct: 105 *CSLKRRY*CGRTWS*VV*FQRQCRWSR 22
Score = 32.2 bits (64), Expect(3) = 4e-037
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 3 RDQRHYFRN*TTQLQILP 56
RDQRH N TTQLQ+LP
Sbjct: 23 RDQRHCLWNQTTQLQVLP 76
Score = 22.1 bits (42), Expect(3) = 5e-055
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3 / -2
Query: 165 YIGGPADMXXXXXXXXXXXXXVHILHGDVL 76
++GG ++M VH+LH DVL
Sbjct: 185 HLGGHSNMDAVRVLNVPRRGDVHVLHRDVL 96
>gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 752
Score = 416 bits (902), Expect(2) = e-120
Identities = 168/189 (88%), Positives = 181/189 (95%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TNGT+SGIKLLNSKFFHINID SK+ITVKDVNITAP DVENTDGVHVG S+ V ITNSTI
Sbjct: 128 TNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTI 307
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
GTGDDC+S+GPGSDGVMVNNI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNGV
Sbjct: 308 GTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGV 487
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTF 546
RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCP+KVCPGK+S+SSHV +KDVTF
Sbjct: 488 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTF 667
Query: 547 RNISGTSST 573
RNI+GTSST
Sbjct: 668 RNITGTSST 694
Score = 337 bits (731), Expect(2) = 4e-096
Identities = 151/190 (79%), Positives = 154/190 (81%)
Frame = -1 / -3
Query: 572 VDDVPEMLRKVTSLMETCEELLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTD 393
VDDVP MLR VTSL T EE L LPG TF GQKYWSMMMG ATSSILMFSKVR DAVSTD
Sbjct: 693 VDDVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTD 514
Query: 392 SASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGP 213
SASSYDLMRTPLVVFLSTQ RPRQP LMPCPGPQ+MLFTMTPSLPGP
Sbjct: 513 SASSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGP 334
Query: 212 METQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSS 33
E QSSPVPMVELVM TL D PTWTPSVFSTS GAVMFTSFTVM E S+LMWKNLELSS
Sbjct: 333 TEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFEASILMWKNLELSS 154
Query: 32 LIPEIVPLVS 3
LIPE VPLV+
Sbjct: 153 LIPETVPLVT 124
Score = 171 bits (369), Expect(3) = 1e-050
Identities = 74/107 (69%), Positives = 80/107 (74%)
Frame = -3 / -2
Query: 552 VAEGDVLDGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGRREHRLGILVRL 373
VAE DVLD DMRGVA LAGA LLGAEVLVDDDGV HLLHPDVLEG+M RR+HRLG+LVRL
Sbjct: 673 VAERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVRL 494
Query: 372 DAHAVGGVPKHAIPHRXXXXXXXXXXXXXXXHTDALPGATGDVVHHD 232
DAHAV G+ +HA+PHR DALPGA DVVHHD
Sbjct: 493 DAHAVSGLLEHAVPHRHVGHVLLILVAA*AADADALPGAADDVVHHD 353
Score = 105 bits (225), Expect(3) = 5e-034
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = +3 / +1
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 475 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 654
Query: 534 GRHLPQHLRHVVHARS 581
GRH+PQH HVVHA++
Sbjct: 655 GRHVPQHHGHVVHAQA 702
Score = 50.1 bits (103), Expect(3) = 5e-034
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 234 HGEQHHLWPRAGHQCGLPRPLQ 299
HGEQHHL PRAGHQ LPRPLQ
Sbjct: 355 HGEQHHLRPRAGHQHRLPRPLQ 420
Score = 46.0 bits (94), Expect(3) = 1e-050
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -1
Query: 85 *CP*KCRC*CGRIWS*VV*FRK*CRWSR 2
*C K R *CGR WS*VV*F++ CRWSR
Sbjct: 206 *CSLKRRY*CGRTWS*VV*FQRQCRWSR 123
Score = 39.6 bits (80), Expect(2) = e-120
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +1 / +1
Query: 577 EAVSLLCSETQPCSGVSL 630
+A+SLLCS++QPCSGVSL
Sbjct: 697 QAISLLCSQSQPCSGVSL 750
Score = 35.9 bits (72), Expect(2) = 4e-096
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 632 MSETPLHGCVSEQSRLTA 579
MS+TPLHGC EQSRL A
Sbjct: 752 MSDTPLHGCDCEQSRLMA 699
Score = 32.2 bits (64), Expect(3) = 5e-034
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 3 RDQRHYFRN*TTQLQILP 56
RDQRH N TTQLQ+LP
Sbjct: 124 RDQRHCLWNQTTQLQVLP 177
Score = 22.1 bits (42), Expect(3) = 1e-050
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3 / -2
Query: 165 YIGGPADMXXXXXXXXXXXXXVHILHGDVL 76
++GG ++M VH+LH DVL
Sbjct: 286 HLGGHSNMDAVRVLNVPRRGDVHVLHRDVL 197
>gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100a22, DNA
sequence
Length = 532
Score = 391 bits (847), Expect = e-107
Identities = 156/177 (88%), Positives = 172/177 (97%)
Frame = +1 / -2
Query: 205 VSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
+S+GPGSDGVMV NI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNGVRIKSYE
Sbjct: 531 ISVGPGSDGVMVTNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYE 352
Query: 385 DAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFRNISGT 564
DAESVLTASHLTFENIRMEEVANPIIIDQYFCP+KVCPGK+S+SSHV +KDVTFRNI+GT
Sbjct: 351 DAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDVTFRNITGT 172
Query: 565 SSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSLQALDCL 735
SSTP+A+SLLCS++QPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS++AL CL
Sbjct: 171 SSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSVEALACL 1
Score = 304 bits (659), Expect = 1e-081
Identities = 137/176 (77%), Positives = 140/176 (79%)
Frame = -1 / +2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
R +RA LPLAVPLALLHTAMVLLFLPAYST TSMS+TPLHGC EQSRL A GVDDVP
Sbjct: 2 RHARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPV 181
Query: 554 MLRKVTSLMETCEELLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYD 375
MLR VTSL T EE L LPG TF GQKYWSMMMG ATSSILMFSKVR DAVSTDSASSYD
Sbjct: 182 MLRNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYD 361
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPME 207
LMRTPLVVFLSTQ RPRQP LMPCPGPQ+ML TMTPSLPGP E
Sbjct: 362 LMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLVTMTPSLPGPTE 529
Score = 216 bits (466), Expect = 4e-055
Identities = 101/168 (60%), Positives = 111/168 (66%)
Frame = -3 / +1
Query: 735 EAIQGLEASLGGSLGVAAHSHXXXXXXXXXXXDIDERDAAARLRLGAEQXXXXXXXXXXX 556
+A QGL+A+LGG+LGVAAH H IDER AAA L L AEQ
Sbjct: 1 QACQGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQADGLWRGRRAR 180
Query: 555 DVAEGDVLDGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGRREHRLGILVR 376
DVAE DVLD DMRGVA LAGA LLGAEVLVDDDGV HLLHPDVLEG+M RR+HRLG+LVR
Sbjct: 181 DVAERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRRRQHRLGVLVR 360
Query: 375 LDAHAVGGVPKHAIPHRXXXXXXXXXXXXXXXHTDALPGATGDVVHHD 232
LDAHAV G+ +HA+PHR DALPGA DV HHD
Sbjct: 361 LDAHAVSGLLEHAVPHRHVGHVLLILVAA*AADADALPGAADDVGHHD 504
Score = 116 bits (247), Expect(3) = 2e-041
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +3 / -1
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 382 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 203
Query: 534 GRHLPQHLRHVVHARSRQPALLRDAAV 614
GRH+PQH HVVHA QPALL A+
Sbjct: 202 GRHVPQHHGHVVHATGHQPALLAVTAM 122
Score = 48.7 bits (100), Expect(3) = 2e-041
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 234 HGEQHHLWPRAGHQCGLPRPLQ 299
HG+QHHL PRAGHQ LPRPLQ
Sbjct: 502 HGDQHHLRPRAGHQHRLPRPLQ 437
Score = 44.6 bits (91), Expect(3) = 2e-041
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2 / -3
Query: 674 WLCAATPREPPREASRPWIA 733
W CAATPR PPR ASRPW A
Sbjct: 62 WPCAATPRAPPRAASRPWHA 3
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 248 bits (535), Expect(2) = 3e-092
Identities = 92/150 (61%), Positives = 119/150 (79%)
Frame = +1 / +1
Query: 46 KFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGS 225
KFFH+N+ KD+ +KDV +TAP D NTDG+H+G SS V I N+ IG GDDC+SIGPG+
Sbjct: 1 KFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGT 180
Query: 226 DGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLT 405
V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLT
Sbjct: 181 TKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLT 360
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 361 ASKIHYENIKMEDSSNPIIIDMKYCPNKIC 450
Score = 149 bits (321), Expect(2) = 6e-055
Identities = 73/149 (48%), Positives = 84/149 (56%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 449 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 270
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
RPR P LMP PGP V T +PGPME QSSP PM M T ++ P W P
Sbjct: 269 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMP 90
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKN 48
SV S GAV TS MSL + MWKN
Sbjct: 89 SVLGLSPGAVTVTSLINMSLHWNTFMWKN 3
Score = 112 bits (240), Expect(2) = 3e-092
Identities = 43/66 (65%), Positives = 59/66 (89%)
Frame = +1 / +1
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 457 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 636
Query: 688 NAKGTA 705
NAKG+A
Sbjct: 637 NAKGSA 654
Score = 86.3 bits (182), Expect(2) = 6e-055
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = -1 / -1
Query: 707 LAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLM 528
+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP K TSL
Sbjct: 656 VALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTFLKETSLT 477
Query: 527 ETCE 516
T E
Sbjct: 476 VTLE 465
>gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 643
Score = 326 bits (707), Expect = 2e-088
Identities = 132/154 (85%), Positives = 149/154 (96%)
Frame = +1 / +2
Query: 310 DVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQK 489
DV+DVTVRDCVL+ TTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCP+K
Sbjct: 2 DVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEK 181
Query: 490 VCPGKRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNK 669
VCPGK+S+SSHV +KDVTFRNI+GTSSTP+A+SLLCS++QPCSGVSLIDVNVEYAGKNNK
Sbjct: 182 VCPGKKSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNK 361
Query: 670 TMAVCSNAKGTAKGSLQALDCLV*SMTLHLHAFF 771
TMAVCSNAKGTAKGS++AL CL *+M++HLHA +
Sbjct: 362 TMAVCSNAKGTAKGSVEALACLA*AMSMHLHACY 463
Score = 250 bits (540), Expect = 3e-065
Identities = 114/137 (83%), Positives = 116/137 (84%)
Frame = -1 / -2
Query: 746 IDQTRQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVD 567
I Q R +RA LPLAVPLALLHTAMVLLFLPAYST TSMS+TPLHGC EQSRL A GVD
Sbjct: 438 IAQARHARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVD 259
Query: 566 DVPEMLRKVTSLMETCEELLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSA 387
DVP MLR VTSL T EE L LPG TF GQKYWSMMMG ATSSILMFSKVR DAVSTDSA
Sbjct: 258 DVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSA 79
Query: 386 SSYDLMRTPLVVFLSTQ 336
SSYDLMRTPLVVFLSTQ
Sbjct: 78 SSYDLMRTPLVVFLSTQ 28
Score = 214 bits (462), Expect = 1e-054
Identities = 97/147 (65%), Positives = 107/147 (72%)
Frame = -3 / -1
Query: 765 CMQMQGHRSDEAIQGLEASLGGSLGVAAHSHXXXXXXXXXXXDIDERDAAARLRLGAEQX 586
CMQM HRS +A QGL+A+LGG+LGVAAH H IDER AAA L L AEQ
Sbjct: 457 CMQMHAHRSGQACQGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQA 278
Query: 585 XXXXXXXXXXDVAEGDVLDGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGR 406
DVAE DVLD DMRGVA LAGA LLGAEVLVDDDGV HLLHPDVLEG+M R
Sbjct: 277 DGLWRGRRARDVAERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEGQMRR 98
Query: 405 REHRLGILVRLDAHAVGGVPKHAIPHR 325
R+HRLG+LVRLDAHAV G+ +HA+PHR
Sbjct: 97 RQHRLGVLVRLDAHAVSGLLEHAVPHR 17
Score = 116 bits (247), Expect(2) = 2e-037
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +3 / +1
Query: 354 HQRRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQ 533
H RRAHQVVRG RVCA GV S LRE RPVLLP EG+PRQ ++LL+C Q
Sbjct: 46 H*RRAHQVVRGRRVCADGVASDLREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQ 225
Query: 534 GRHLPQHLRHVVHARSRQPALLRDAAV 614
GRH+PQH HVVHA QPALL A+
Sbjct: 226 GRHVPQHHGHVVHATGHQPALLAVTAM 306
Score = 62.0 bits (129), Expect(2) = 2e-037
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 674 WLCAATPREPPREASRPWIASSDR*PCICMH 766
W CAATPR PPR ASRPW A +R* CICMH
Sbjct: 366 WPCAATPRAPPRAASRPWHAWPER*ACICMH 458
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 281 bits (608), Expect(2) = 3e-087
Identities = 108/165 (65%), Positives = 131/165 (79%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N T+SGI LLNSKFFH+N+ K +T+KDV +TAP D NTDG+H+G SS V IT +TIG
Sbjct: 85 NATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIG 264
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPGS G+ V +TCGPG GISVG LGRYKDEKDV+D+ V+DC L+ T+NGVR
Sbjct: 265 VGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVR 444
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
IKSYEDA V+TAS L +ENI M++VANPIIID +CP K+C K
Sbjct: 445 IKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 579
Score = 189 bits (408), Expect(2) = 5e-055
Identities = 90/163 (55%), Positives = 101/163 (61%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SMMMGLATSS+ MFS +AV T +ASS DL+RTPL+VFLS Q
Sbjct: 569 QILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSV 390
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGPQV T+ P LPGPME QSSP PMV VM TLE+ P W P
Sbjct: 389 TSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 210
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLV 6
SV S GAV TS V L + MWKNLE S +IPE V L+
Sbjct: 209 SVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVIPETVALL 81
Score = 62.9 bits (131), Expect(2) = 3e-087
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCS 618
S V++KDVTF+NI+GTSSTPEAVSLLCSE P +
Sbjct: 586 SKVTVKDVTFKNITGTSSTPEAVSLLCSEKSPAA 687
Score = 46.9 bits (96), Expect(2) = 5e-055
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = -1 / -2
Query: 611 GCVSEQSRLTASGVDDVPEMLRKVTSLMETCEELL 507
G SEQSRLTASGVD+VP M VTSL T E L
Sbjct: 680 GDFSEQSRLTASGVDEVPVMFLNVTSLTVTLESPL 576
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 281 bits (608), Expect(2) = 4e-085
Identities = 108/165 (65%), Positives = 131/165 (79%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N T+SGI LLNSKFFH+N+ K +T+KDV +TAP D NTDG+H+G SS V IT +TIG
Sbjct: 88 NATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIG 267
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPGS G+ V +TCGPG GISVG LGRYKDEKDV+D+ V+DC L+ T+NGVR
Sbjct: 268 VGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVR 447
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
IKSYEDA V+TAS L +ENI M++VANPIIID +CP K+C K
Sbjct: 448 IKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 582
Score = 189 bits (408), Expect(2) = 3e-054
Identities = 90/163 (55%), Positives = 101/163 (61%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SMMMGLATSS+ MFS +AV T +ASS DL+RTPL+VFLS Q
Sbjct: 572 QILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSV 393
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGPQV T+ P LPGPME QSSP PMV VM TLE+ P W P
Sbjct: 392 TSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 213
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLV 6
SV S GAV TS V L + MWKNLE S +IPE V L+
Sbjct: 212 SVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVIPETVALL 84
Score = 55.6 bits (115), Expect(2) = 4e-085
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLC 597
S V++KDVTF+NI+GTSSTPEAVSLLC
Sbjct: 589 SKVTVKDVTFKNITGTSSTPEAVSLLC 669
Score = 44.1 bits (90), Expect(2) = 3e-054
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 EQSRLTASGVDDVPEMLRKVTSLMETCEELL 507
EQSRLTASGVD+VP M VTSL T E L
Sbjct: 671 EQSRLTASGVDEVPVMFLNVTSLTVTLESPL 579
>gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10508479, DNA
sequence
Length = 525
Score = 313 bits (677), Expect = 3e-084
Identities = 127/142 (89%), Positives = 135/142 (95%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TNGT+SGIKLLNSKFFHINID SK+ITVKDVNITAP DVENTDGVHVG S+ V ITNSTI
Sbjct: 100 TNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTI 279
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
GTGDDC+S+GPGSDGVMVNNI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNGV
Sbjct: 280 GTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGV 459
Query: 367 RIKSYEDAESVLTASHLTFENI 432
RIKSYEDAESVLTASHLTFENI
Sbjct: 460 RIKSYEDAESVLTASHLTFENI 525
Score = 259 bits (559), Expect = 6e-068
Identities = 114/143 (79%), Positives = 117/143 (81%)
Frame = -1 / -2
Query: 431 MFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQ 252
MFSKVR DAVSTDSASSYDLMRTPLVVFLSTQ RPRQP LMPCPGPQ
Sbjct: 524 MFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQ 345
Query: 251 VMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLE 72
+MLFTMTPSLPGP E QSSPVPMVELVM TL D PTWTPSVFSTS GAVMFTSFTVM E
Sbjct: 344 MMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFE 165
Query: 71 VSMLMWKNLELSSLIPEIVPLVS 3
S+LMWKNLELSSLIPE VPLV+
Sbjct: 164 ASILMWKNLELSSLIPETVPLVT 96
Score = 95.5 bits (202), Expect(3) = 6e-028
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = -3 / -1
Query: 432 DVLEGEMGRREHRLGILVRLDAHAVGGVPKHAIPHRXXXXXXXXXXXXXXXHTDALPGAT 253
DVLEG+M RR+HRLG+LVRLDAHAV G+ +HA+PHR DALPGA
Sbjct: 525 DVLEGQMRRRQHRLGVLVRLDAHAVSGLLEHAVPHRHVGHVLLILVAA*AADADALPGAA 346
Query: 252 GDVVHHD 232
DVVHHD
Sbjct: 345 DDVVHHD 325
Score = 46.0 bits (94), Expect(3) = 6e-028
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 85 *CP*KCRC*CGRIWS*VV*FRK*CRWSR 2
*C K R *CGR WS*VV*F++ CRWSR
Sbjct: 178 *CSLKRRY*CGRTWS*VV*FQRQCRWSR 95
Score = 22.1 bits (42), Expect(3) = 6e-028
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3 / -1
Query: 165 YIGGPADMXXXXXXXXXXXXXVHILHGDVL 76
++GG ++M VH+LH DVL
Sbjct: 258 HLGGHSNMDAVRVLNVPRRGDVHVLHRDVL 169
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 240 bits (518), Expect(2) = 4e-082
Identities = 92/138 (66%), Positives = 110/138 (79%)
Frame = +1 / +1
Query: 91 KDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQG 270
KDV +TAP D NTDG+H+G SS V IT +TIG GDDC+SIGPGS G+ V +TCGPG G
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 271 ISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVA 450
ISVG LGRYKDEKDV+D+ V+DC L+ T+NGVRIKSYEDA V+TAS L +ENI M++VA
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 451 NPIIIDQYFCPQKVCPGK 504
NPIIID +CP K+C K
Sbjct: 370 NPIIIDMKYCPNKICTAK 423
Score = 160 bits (343), Expect(2) = 4e-052
Identities = 76/134 (56%), Positives = 84/134 (62%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SMMMGLATSS+ MFS +AV T +ASS DL+RTPL+VFLS Q
Sbjct: 413 QILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSV 234
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGPQV T+ P LPGPME QSSP PMV VM TLE+ P W P
Sbjct: 233 TSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 54
Query: 134 SVFSTSAGAVMFTS 93
SV S GAV TS
Sbjct: 53 SVLGLSPGAVTVTS 12
Score = 86.8 bits (183), Expect(2) = 4e-082
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNN 666
S V++KDVTF+NI+GTSSTPEAVSLLCS+ PCSGV++ ++ VEY G NN
Sbjct: 430 SKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDNIKVEYKGTNN 579
Score = 67.0 bits (140), Expect(2) = 4e-052
Identities = 32/53 (60%), Positives = 35/53 (66%)
Frame = -1 / -3
Query: 665 LFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCEELL 507
L +P YSTL TPL G +SEQSRLTASGVD+VP M VTSL T E L
Sbjct: 578 LLVPLYSTLMLSMVTPLQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPL 420
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 281 bits (608), Expect(2) = 2e-080
Identities = 108/165 (65%), Positives = 131/165 (79%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N T+SGI LLNSKFFH+N+ K +T+KDV +TAP D NTDG+H+G SS V IT +TIG
Sbjct: 13 NATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIG 192
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPGS G+ V +TCGPG GISVG LGRYKDEKDV+D+ V+DC L+ T+NGVR
Sbjct: 193 VGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVR 372
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
IKSYEDA V+TAS L +ENI M++VANPIIID +CP K+C K
Sbjct: 373 IKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 507
Score = 189 bits (408), Expect(2) = 3e-049
Identities = 90/163 (55%), Positives = 101/163 (61%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SMMMGLATSS+ MFS +AV T +ASS DL+RTPL+VFLS Q
Sbjct: 497 QILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSV 318
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGPQV T+ P LPGPME QSSP PMV VM TLE+ P W P
Sbjct: 317 TSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 138
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLV 6
SV S GAV TS V L + MWKNLE S +IPE V L+
Sbjct: 137 SVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVIPETVALL 9
Score = 40.0 bits (81), Expect(2) = 2e-080
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTP 576
S V++KDVTF+NI+GTSSTP
Sbjct: 514 SKVTVKDVTFKNITGTSSTP 573
Score = 27.6 bits (54), Expect(2) = 3e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 575 GVDDVPEMLRKVTSLMETCEELL 507
GVD+VP M VTSL T E L
Sbjct: 572 GVDEVPVMFLNVTSLTVTLESPL 504
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 267 bits (577), Expect(2) = 2e-078
Identities = 100/162 (61%), Positives = 129/162 (79%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
NG +SGI LLN+KFFH+N+ KD+ +KDV +TAP D NTDG+H+G SS V I N+ IG
Sbjct: 126 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 305
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+R
Sbjct: 306 VGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLR 485
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK+YEDA SVLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 486 IKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 611
Score = 165 bits (354), Expect(2) = 4e-043
Identities = 80/162 (49%), Positives = 93/162 (57%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 610 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 431
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
RPR P LMP PGP V T +PGPME QSSP PM M T ++ P W P
Sbjct: 430 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMP 251
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPL 9
SV S GAV TS MSL + MWKNL SS+IP+ PL
Sbjct: 250 SVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPL 125
Score = 47.8 bits (98), Expect(2) = 2e-078
Identities = 18/30 (60%), Positives = 27/30 (90%)
Frame = +1 / +3
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLC 597
S +S V+ +DV+F+N++GTS++PEAVSLLC
Sbjct: 618 SGASKVTRQDVSFKNVTGTSASPEAVSLLC 707
Score = 31.8 bits (63), Expect(2) = 4e-043
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 599 EQSRLTASGVDDVPEMLRKVTSLMETCE 516
EQSRLTASG+ +VP K TS T E
Sbjct: 709 EQSRLTASGLAEVPVTFLKETS*RVTLE 626
>gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 729
Score = 215 bits (464), Expect(2) = 3e-078
Identities = 81/149 (54%), Positives = 108/149 (72%)
Frame = +1 / +2
Query: 49 FFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSD 228
FFH+NI SK++ + V + AP + NTDG+H+G S NV I+ +TIG GDDC+SIGPGS
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 229 GVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTA 408
+ ++ + CGPG GISVG LGRYKDEKDV DV V+ C L TTNG+RIKSYED++S
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 409 SHLTFENIRMEEVANPIIIDQYFCPQKVC 495
+ +E++ M+ V+ PIIIDQ +CP +C
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNIC 448
Score = 130 bits (278), Expect(2) = 1e-039
Identities = 64/149 (42%), Positives = 73/149 (48%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q +GQ +WSMM+G T S++ S + D SSYDLMR PLVV S Q
Sbjct: 447 QMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSS 268
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGP + LPGPME QSSP PMV +M T + P W P
Sbjct: 267 TSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESPMWIP 88
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKN 48
SV GA T L ML WKN
Sbjct: 87 SVLGLFPGAFTVTLSINTFLLAKMLRWKN 1
Score = 98.7 bits (209), Expect(2) = 3e-078
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
RS +S V++ DV F+NI GTS+TPEA++L C++ PC GV L +V+++Y NNKTMAVC
Sbjct: 452 RSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKYNKSNNKTMAVC 631
Query: 685 SNAKGTAKGSLQALDCL 735
NA G + G + L C+
Sbjct: 632 KNAVGKSFGLSKELACI 682
Score = 54.7 bits (113), Expect(2) = 1e-039
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -1 / -1
Query: 710 PLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSL 531
P +P A L TAMVLL Y T S TP HG +S Q + ASGV +VP M K TS+
Sbjct: 657 PKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQLSVMASGVLEVPWMFLKTTSV 478
Query: 530 METCE 516
T +
Sbjct: 477 TATLD 463
>gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 647
Score = 292 bits (631), Expect = 7e-078
Identities = 118/137 (86%), Positives = 133/137 (97%)
Frame = +1 / -2
Query: 361 GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDV 540
GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCP+KVCPGK+S+SSHV +KDV
Sbjct: 646 GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDV 467
Query: 541 TFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSLQ 720
TFRNI+GTSSTP+A+SLLCS++QPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS++
Sbjct: 466 TFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSVE 287
Query: 721 ALDCLV*SMTLHLHAFF 771
AL CL *+M++HLHA +
Sbjct: 286 ALACLA*AMSMHLHACY 236
Score = 231 bits (498), Expect = 2e-059
Identities = 105/129 (81%), Positives = 107/129 (82%)
Frame = -1 / +3
Query: 746 IDQTRQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVD 567
I Q R +RA LPLAVPLALLHTAMVLLFLPAYST TSMS+TPLHGC EQSRL A GVD
Sbjct: 261 IAQARHARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVD 440
Query: 566 DVPEMLRKVTSLMETCEELLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSA 387
DVP MLR VTSL T EE L LPG TF GQKYWSMMMG ATSSILMFS VR DAVSTDSA
Sbjct: 441 DVPVMLRNVTSLTMT*EESLFLPGHTFSGQKYWSMMMGFATSSILMFSXVRCDAVSTDSA 620
Query: 386 SSYDLMRTP 360
SSYDLMRTP
Sbjct: 621 SSYDLMRTP 647
Score = 191 bits (411), Expect = 2e-047
Identities = 89/135 (65%), Positives = 96/135 (71%)
Frame = -3 / +2
Query: 765 CMQMQGHRSDEAIQGLEASLGGSLGVAAHSHXXXXXXXXXXXDIDERDAAARLRLGAEQX 586
CMQM HRS +A QGL+A+LGG+LGVAAH H IDER AAA L L AEQ
Sbjct: 242 CMQMHAHRSGQACQGLDAALGGALGVAAHGHGLVVLAGVLHVYIDERHAAAWL*LRAEQA 421
Query: 585 XXXXXXXXXXDVAEGDVLDGDMRGVASLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGR 406
DVAE DVLD DMRGVA LAGA LLGAEVLVDDDGV HLLHPDVLE +M R
Sbjct: 422 DGLWRGRRARDVAERDVLDDDMRGVALLAGAHLLGAEVLVDDDGVRHLLHPDVLEXQMRR 601
Query: 405 REHRLGILVRLDAHA 361
R+HRLG+LVRLDAHA
Sbjct: 602 RQHRLGVLVRLDAHA 646
Score = 111 bits (238), Expect(2) = 3e-036
Identities = 50/85 (58%), Positives = 56/85 (65%)
Frame = +3 / -1
Query: 360 RRAHQVVRGCRVCAHGVPSHLREXXXXXXXXXXXXRPVLLPPEGLPRQAKQLLACLHQGR 539
RRAHQVVRG RVCA GV S RE RPVLLP EG+PRQ ++LL+C QGR
Sbjct: 647 RRAHQVVRGRRVCADGVASDXREHQDGGGGEPHHHRPVLLPREGVPRQEERLLSCHRQGR 468
Query: 540 HLPQHLRHVVHARSRQPALLRDAAV 614
H+PQH HVVHA QPALL A+
Sbjct: 467 HVPQHHGHVVHATGHQPALLAVTAM 393
Score = 62.0 bits (129), Expect(2) = 3e-036
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 674 WLCAATPREPPREASRPWIASSDR*PCICMH 766
W CAATPR PPR ASRPW A +R* CICMH
Sbjct: 333 WPCAATPRAPPRAASRPWHAWPER*ACICMH 241
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 178 bits (383), Expect(2) = 6e-074
Identities = 65/101 (64%), Positives = 84/101 (83%)
Frame = +1 / +2
Query: 193 GDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRI 372
GDDC+SIGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RI
Sbjct: 2 GDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRI 181
Query: 373 KSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
K+YEDA SVLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 182 KAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 304
Score = 121 bits (259), Expect(2) = 6e-074
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +2
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 311 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 490
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 491 NAKGSATGCLKELAC 535
Score = 103 bits (219), Expect(2) = 2e-042
Identities = 51/101 (50%), Positives = 59/101 (58%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 303 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 124
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSP 192
RPR P LMP PGP V T +PGPME QSSP
Sbjct: 123 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSP 1
Score = 91.3 bits (193), Expect(2) = 2e-042
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 537 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 358
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 357 TFLKETSLTVTLE 319
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 240 bits (518), Expect(2) = 1e-072
Identities = 92/138 (66%), Positives = 110/138 (79%)
Frame = +1 / +1
Query: 91 KDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQG 270
KDV +TAP D NTDG+H+G SS V IT +TIG GDDC+SIGPGS G+ V +TCGPG G
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 271 ISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVA 450
ISVG LGRYKDEKDV+D+ V+DC L+ T+NGVRIKSYEDA V+TAS L +ENI M++VA
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 451 NPIIIDQYFCPQKVCPGK 504
NPIIID +CP K+C K
Sbjct: 370 NPIIIDMKYCPNKICTAK 423
Score = 160 bits (343), Expect(2) = 2e-045
Identities = 76/134 (56%), Positives = 84/134 (62%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SMMMGLATSS+ MFS +AV T +ASS DL+RTPL+VFLS Q
Sbjct: 413 QILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSV 234
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGPQV T+ P LPGPME QSSP PMV VM TLE+ P W P
Sbjct: 233 TSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 54
Query: 134 SVFSTSAGAVMFTS 93
SV S GAV TS
Sbjct: 53 SVLGLSPGAVTVTS 12
Score = 55.1 bits (114), Expect(2) = 1e-072
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSE 603
S V++KDVTF+NI+GTSSTP AVSLLCS+
Sbjct: 430 SKVTVKDVTFKNITGTSSTPGAVSLLCSD 516
Score = 44.1 bits (90), Expect(2) = 2e-045
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 605 VSEQSRLTASGVDDVPEMLRKVTSLMETCEELL 507
+SEQSRLTA GVD+VP M VTSL T E L
Sbjct: 518 LSEQSRLTAPGVDEVPVMFLNVTSLTVTLESPL 420
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 166 bits (356), Expect(2) = 3e-070
Identities = 61/97 (62%), Positives = 80/97 (82%)
Frame = +1 / +1
Query: 205 VSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
+SIGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YE
Sbjct: 1 ISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYE 180
Query: 385 DAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
DA SVLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 181 DAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 291
Score = 121 bits (259), Expect(2) = 3e-070
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +1
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 298 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 477
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 478 NAKGSATGCLKELAC 522
Score = 94.5 bits (200), Expect(2) = 7e-040
Identities = 47/96 (48%), Positives = 55/96 (57%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 290 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 111
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPME 207
RPR P LMP PGP V T +PGPME
Sbjct: 110 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 3
Score = 91.3 bits (193), Expect(2) = 7e-040
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -3
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 524 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 345
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 344 TFLKETSLTVTLE 306
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 162 bits (349), Expect(2) = 3e-069
Identities = 60/95 (63%), Positives = 78/95 (82%)
Frame = +1 / +3
Query: 211 IGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDA 390
IGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA
Sbjct: 3 IGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDA 182
Query: 391 ESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
SVLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 183 ASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 287
Score = 121 bits (259), Expect(2) = 3e-069
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 294 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 473
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 474 NAKGSATGCLKELAC 518
Score = 92.3 bits (195), Expect(2) = 3e-039
Identities = 46/95 (48%), Positives = 54/95 (56%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 286 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 107
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPM 210
RPR P LMP PGP V T +PGPM
Sbjct: 106 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPM 2
Score = 91.3 bits (193), Expect(2) = 3e-039
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -1
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 520 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 341
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 340 TFLKETSLTVTLE 302
>gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164002, DNA
sequence
Length = 608
Score = 215 bits (464), Expect(2) = 4e-069
Identities = 81/149 (54%), Positives = 108/149 (72%)
Frame = +1 / +2
Query: 49 FFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSD 228
FFH+NI SK++ + V + AP + NTDG+H+G S NV I+ +TIG GDDC+SIGPGS
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 229 GVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTA 408
+ ++ + CGPG GISVG LGRYKDEKDV DV V+ C L TTNG+RIKSYED++S
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 409 SHLTFENIRMEEVANPIIIDQYFCPQKVC 495
+ +E++ M+ V+ PIIIDQ +CP +C
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNIC 448
Score = 130 bits (278), Expect(2) = 1e-034
Identities = 64/149 (42%), Positives = 73/149 (48%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q +GQ +WSMM+G T S++ S + D SSYDLMR PLVV S Q
Sbjct: 447 QMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSS 268
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGP + LPGPME QSSP PMV +M T + P W P
Sbjct: 267 TSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESPMWIP 88
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLMWKN 48
SV GA T L ML WKN
Sbjct: 87 SVLGLFPGAFTVTLSINTFLLAKMLRWKN 1
Score = 68.4 bits (143), Expect(2) = 4e-069
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEY 651
RS +S V++ DV F+NI GTS+TPEA++L C++ PC GV L +V+++Y
Sbjct: 452 RSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKY 598
Score = 38.2 bits (77), Expect(2) = 1e-034
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -1 / -3
Query: 650 YSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCE 516
Y T S TP HG +S Q + ASGV +VP M K TS+ T +
Sbjct: 597 YLMSTLWSCTPWHGRLSAQLSVMASGVLEVPWMFLKTTSVTATLD 463
>gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a15, DNA
sequence
Length = 688
Score = 261 bits (565), Expect = 9e-069
Identities = 104/119 (87%), Positives = 112/119 (94%)
Frame = +1 / -2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TNGT+SGIKLLNSKFFHINID SK+ITVKDVNITAP DVENTDGVHVG S+ V ITNSTI
Sbjct: 357 TNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTI 178
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNG 363
GTGDDC+S+GPGSDGVMVNNI CGPGQGIS+GCLGRYKDEKDV+DVTVRDCVL+ TTNG
Sbjct: 177 GTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNG 1
Score = 211 bits (455), Expect = 1e-053
Identities = 92/120 (76%), Positives = 95/120 (79%)
Frame = -1 / +2
Query: 362 PLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPM 183
PLVVFLSTQ RPRQP LMPCPGPQ+MLFTMTPSLPGP E QSSPVPM
Sbjct: 2 PLVVFLSTQSRTVTSVTSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPM 181
Query: 182 VELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
VELVM TL D PTWTPSVFSTS GAVMFTSFTVM E S+LMWKNLELSSLIPE VPLV+
Sbjct: 182 VELVMLTLVDIPTWTPSVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPETVPLVT 361
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 218 bits (470), Expect(2) = 1e-068
Identities = 83/124 (66%), Positives = 100/124 (80%)
Frame = +1 / -1
Query: 133 DGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKD 312
DG+H+G SS V IT +TIG GDDC+SIGPGS G+ V +TCGPG GISVG LGRYKDEKD
Sbjct: 479 DGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKD 300
Query: 313 VSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKV 492
V+D+ V+DC L+ T+NGVRIKSYEDA V+TAS L +ENI M++VANPIIID +CP K+
Sbjct: 299 VTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKI 120
Query: 493 CPGK 504
C K
Sbjct: 119 CTAK 108
Score = 145 bits (312), Expect(2) = 5e-043
Identities = 68/120 (56%), Positives = 76/120 (63%)
Frame = -1 / +1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SMMMGLATSS+ MFS +AV T +ASS DL+RTPL+VFLS Q
Sbjct: 118 QILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSV 297
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
PR PTLMP PGPQV T+ P LPGPME QSSP PMV VM TLE+ P W P
Sbjct: 298 TSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 477
Score = 63.8 bits (133), Expect(2) = 1e-068
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPC 615
S V++KDVTF+NI+GTSSTPEAVSLLCS+ PC
Sbjct: 101 SKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPC 3
Score = 50.6 bits (104), Expect(2) = 5e-043
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -1 / +1
Query: 617 LHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCEELL 507
L G +SEQSRLTASGVD+VP M VTSL T E L
Sbjct: 1 LQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPL 111
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 158 bits (339), Expect(2) = 6e-068
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = +1 / +1
Query: 217 PGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAES 396
PG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA S
Sbjct: 1 PGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAAS 180
Query: 397 VLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
VLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 181 VLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 279
Score = 121 bits (259), Expect(2) = 6e-068
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +1
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 286 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 465
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 466 NAKGSATGCLKELAC 510
Score = 91.3 bits (193), Expect(2) = 1e-036
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 512 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 333
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 332 TFLKETSLTVTLE 294
Score = 84.0 bits (177), Expect(2) = 1e-036
Identities = 43/92 (46%), Positives = 51/92 (55%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 278 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 99
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLP 219
RPR P LMP PGP V T +P
Sbjct: 98 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVP 3
>gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 728
Score = 173 bits (372), Expect(3) = 4e-067
Identities = 66/116 (56%), Positives = 85/116 (73%)
Frame = +1 / -2
Query: 148 GGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVT 327
G S NV I+ +TIG GDDC+SIGPGS + ++ + CGPG GISVG LGRYKDEKDV DV
Sbjct: 676 GDSENVTISGTTIGVGDDCISIGPGSKTIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVK 497
Query: 328 VRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
V+ C L TTNG+RIKSYED++S + +E++ M+ V+ PIIIDQ +CP +C
Sbjct: 496 VKGCTLVGTTNGLRIKSYEDSKSSPKVTKFVYEDVTMDNVSYPIIIDQKYCPNNIC 329
Score = 106 bits (226), Expect(2) = 2e-032
Identities = 51/116 (43%), Positives = 60/116 (51%)
Frame = -1 / +3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q +GQ +WSMM+G T S++ S + D SSYDLMR PLVV S Q
Sbjct: 330 QMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSS 509
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPP 147
PR PTLMP PGP + LPGPME QSSP PMV +M T + P
Sbjct: 510 TSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESP 677
Score = 98.7 bits (209), Expect(3) = 4e-067
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +1 / -2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
RS +S V++ DV F+NI GTS+TPEA++L C++ PC GV L +V+++Y NNKTMAVC
Sbjct: 325 RSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKYNKSNNKTMAVC 146
Query: 685 SNAKGTAKGSLQALDCL 735
NA G + G + L C+
Sbjct: 145 KNAVGKSFGLSKELACI 95
Score = 54.7 bits (113), Expect(2) = 2e-032
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -1 / +3
Query: 710 PLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSL 531
P +P A L TAMVLL Y T S TP HG +S Q + ASGV +VP M K TS+
Sbjct: 120 PKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQLSVMASGVLEVPWMFLKTTSV 299
Query: 530 METCE 516
T +
Sbjct: 300 TATLD 314
Score = 24.0 bits (46), Expect(3) = 4e-067
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 112 PADVENTDGVHVG 150
P + NTDG+H+G
Sbjct: 711 PGNSPNTDGIHMG 673
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 670
Score = 150 bits (323), Expect(2) = 1e-065
Identities = 55/83 (66%), Positives = 71/83 (85%)
Frame = +1 / +2
Query: 247 ITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFE 426
+TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS + +E
Sbjct: 8 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 187
Query: 427 NIRMEEVANPIIIDQYFCPQKVC 495
NI+ME+ +NPIIID +CP K+C
Sbjct: 188 NIKMEDSSNPIIIDMKYCPNKIC 256
Score = 121 bits (259), Expect(2) = 1e-065
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +2
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 263 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 442
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 443 NAKGSATGCLKELAC 487
Score = 91.3 bits (193), Expect(2) = 2e-036
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 489 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 310
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 309 TFLKETSLTVTLE 271
Score = 83.1 bits (175), Expect(2) = 2e-036
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 255 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 76
Query: 314 XXXXXXXRPRQPTLMPCPGPQV 249
RPR P LMP PGP V
Sbjct: 75 TSFSSLYRPRLPMLMPWPGPHV 10
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 150 bits (323), Expect(2) = 1e-065
Identities = 55/83 (66%), Positives = 71/83 (85%)
Frame = +1 / +3
Query: 247 ITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFE 426
+TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS + +E
Sbjct: 3 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 182
Query: 427 NIRMEEVANPIIIDQYFCPQKVC 495
NI+ME+ +NPIIID +CP K+C
Sbjct: 183 NIKMEDSSNPIIIDMKYCPNKIC 251
Score = 121 bits (259), Expect(2) = 1e-065
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 258 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 437
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 438 NAKGSATGCLKELAC 482
Score = 91.3 bits (193), Expect(2) = 2e-036
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -3
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 484 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 305
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 304 TFLKETSLTVTLE 266
Score = 83.1 bits (175), Expect(2) = 2e-036
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 250 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 71
Query: 314 XXXXXXXRPRQPTLMPCPGPQV 249
RPR P LMP PGP V
Sbjct: 70 TSFSSLYRPRLPMLMPWPGPHV 5
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 149 bits (320), Expect(2) = 2e-065
Identities = 55/82 (67%), Positives = 70/82 (85%)
Frame = +1 / +3
Query: 250 TCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFEN 429
TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS + +EN
Sbjct: 3 TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYEN 182
Query: 430 IRMEEVANPIIIDQYFCPQKVC 495
I+ME+ +NPIIID +CP K+C
Sbjct: 183 IKMEDSSNPIIIDMKYCPNKIC 248
Score = 121 bits (259), Expect(2) = 2e-065
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 255 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 434
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 435 NAKGSATGCLKELAC 479
Score = 91.3 bits (193), Expect(2) = 2e-036
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -1
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 481 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 302
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 301 TFLKETSLTVTLE 263
Score = 83.1 bits (175), Expect(2) = 2e-036
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = -1 / -1
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 247 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 68
Query: 314 XXXXXXXRPRQPTLMPCPGPQV 249
RPR P LMP PGP V
Sbjct: 67 TSFSSLYRPRLPMLMPWPGPHV 2
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 224 bits (483), Expect(2) = 2e-062
Identities = 85/136 (62%), Positives = 108/136 (79%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
NG +SGI LLN+KFFH+N+ KD+ +KDV +TAP D NTDG+H+G SS V I N+ IG
Sbjct: 485 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 306
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+R
Sbjct: 305 VGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLR 126
Query: 370 IKSYEDAESVLTASHL 417
IK+YEDA SVLTAS +
Sbjct: 125 IKAYEDAASVLTASKI 78
Score = 142 bits (304), Expect = 9e-033
Identities = 66/134 (49%), Positives = 77/134 (57%)
Frame = -1 / +1
Query: 410 DAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMT 231
+AVST++ASSY L+R PL+VF S Q RPR P LMP PGP V T
Sbjct: 85 EAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFT 264
Query: 230 PSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWK 51
+PGPME QSSP PM M T ++ P W PSV S GAV TS MSL + MWK
Sbjct: 265 LVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWK 444
Query: 50 NLELSSLIPEIVPL 9
NL SS+IP+ PL
Sbjct: 445 NLAFSSVIPDTSPL 486
Score = 37.3 bits (75), Expect(2) = 2e-062
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1 / -2
Query: 424 ENIRMEEVANPIIIDQYFCPQKV 492
ENI+ E+ +NPII+D+ +CP K+
Sbjct: 72 ENIKREDWSNPIIMDRKYCPNKI 4
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 236 bits (510), Expect = 4e-061
Identities = 88/146 (60%), Positives = 115/146 (78%)
Frame = +1 / +3
Query: 58 INIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVM 237
+N+ KD+ +KDV +TAP D NTDG+H+G SS V I N+ IG GDDC+SIGPG+ V
Sbjct: 222 MNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVN 401
Query: 238 VNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHL 417
+ +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS +
Sbjct: 402 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKI 581
Query: 418 TFENIRMEEVANPIIIDQYFCPQKVC 495
+ENI+ME+ +NPIIID +CP K+C
Sbjct: 582 HYENIKMEDSSNPIIIDMKYCPNKIC 659
Score = 139 bits (299), Expect = 5e-032
Identities = 70/146 (47%), Positives = 81/146 (55%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 658 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 479
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
RPR P LMP PGP V T +PGPME QSSP PM M T ++ P W P
Sbjct: 478 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMP 299
Query: 134 SVFSTSAGAVMFTSFTVMSLEVSMLM 57
SV S GAV TS MSL + M
Sbjct: 298 SVLGLSPGAVTVTSLINMSLHWNTFM 221
>gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808294, DNA
sequence
Length = 787
Score = 129 bits (277), Expect(2) = 2e-059
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = +1 / -2
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 453
S+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS + +ENI+ME+ +N
Sbjct: 786 SIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSN 607
Query: 454 PIIIDQYFCPQKVC 495
PIIID +CP K+C
Sbjct: 606 PIIIDMKYCPNKIC 565
Score = 121 bits (259), Expect(2) = 2e-059
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / -2
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 558 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 379
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 378 NAKGSATGCLKELAC 334
Score = 91.3 bits (193), Expect(2) = 8e-032
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / +2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 332 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 511
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 512 TFLKETSLTVTLE 550
Score = 67.5 bits (141), Expect(2) = 8e-032
Identities = 35/74 (47%), Positives = 42/74 (56%)
Frame = -1 / +2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 566 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 745
Query: 314 XXXXXXXRPRQPTL 273
RPR P L
Sbjct: 746 TSFSSLYRPRLPML 787
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 213 bits (459), Expect(2) = 5e-058
Identities = 80/129 (62%), Positives = 102/129 (79%)
Frame = +1 / +1
Query: 109 APADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCL 288
A D NTDG+H+G SS V I N+ IG GDDC+SIGPG+ V + +TCGPG GIS+G L
Sbjct: 1 ARGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSL 180
Query: 289 GRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIID 468
GRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS + +ENI+ME+ +NPIIID
Sbjct: 181 GRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIID 360
Query: 469 QYFCPQKVC 495
+CP K+C
Sbjct: 361 MKYCPNKIC 387
Score = 125 bits (268), Expect(2) = 2e-030
Identities = 61/126 (48%), Positives = 71/126 (56%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXX 315
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 386 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSV 207
Query: 314 XXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTP 135
RPR P LMP PGP V T +PGPME QSSP PM M T ++ P W P
Sbjct: 206 TSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMP 27
Query: 134 SVFSTS 117
SV S
Sbjct: 26 SVLGLS 9
Score = 33.6 bits (67), Expect(2) = 5e-058
Identities = 11/22 (50%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 508 SNSSHVSIKDVTFRNISGTSST 573
S +S V++KDV+F+N++GTS++
Sbjct: 394 SGASKVTVKDVSFKNVTGTSAS 459
Score = 28.6 bits (56), Expect(2) = 2e-030
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / -1
Query: 552 VAEGDVLDGDMRGVA 508
V EGDVLDGD+ G A
Sbjct: 438 VLEGDVLDGDLGGAA 394
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 226 bits (487), Expect = 5e-058
Identities = 86/127 (67%), Positives = 103/127 (81%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N T+SGI LLNSKFFH+N+ K +T+KDV +TAP D NTDG+H+G SS V IT +TIG
Sbjct: 381 NATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIG 202
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPGS G+ V +TCGPG GISVG LGRYKDEKDV+D+ V+DC L+ T+NGVR
Sbjct: 201 VGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVR 22
Query: 370 IKSYEDA 390
IKSYEDA
Sbjct: 21 IKSYEDA 1
Score = 154 bits (331), Expect = 2e-036
Identities = 71/128 (55%), Positives = 78/128 (60%)
Frame = -1 / +2
Query: 389 ASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPM 210
ASS DL+RTPL+VFLS Q PR PTLMP PGPQV T+ P LPGPM
Sbjct: 2 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 181
Query: 209 ETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSL 30
E QSSP PMV VM TLE+ P W PSV S GAV TS V L + MWKNLE S +
Sbjct: 182 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 361
Query: 29 IPEIVPLV 6
IPE V L+
Sbjct: 362 IPETVALL 385
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 224 bits (484), Expect = 1e-057
Identities = 85/138 (61%), Positives = 109/138 (78%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
NG +SGI LLN+KFFH+N+ KD+ +KDV +TAP D NTDG+H+G SS V I N+ IG
Sbjct: 278 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 457
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+R
Sbjct: 458 VGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLR 637
Query: 370 IKSYEDAESVLTASHLTF 423
IK+YEDA SVLTAS + +
Sbjct: 638 IKAYEDAASVLTASKIHY 691
Score = 142 bits (304), Expect = 9e-033
Identities = 66/134 (49%), Positives = 77/134 (57%)
Frame = -1 / -3
Query: 410 DAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMT 231
+AVST++ASSY L+R PL+VF S Q RPR P LMP PGP V T
Sbjct: 678 EAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFT 499
Query: 230 PSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWK 51
+PGPME QSSP PM M T ++ P W PSV S GAV TS MSL + MWK
Sbjct: 498 LVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWK 319
Query: 50 NLELSSLIPEIVPL 9
NL SS+IP+ PL
Sbjct: 318 NLAFSSVIPDTSPL 277
>gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_G01_A002 3', mRNA sequence
Length = 709
Score = 119 bits (254), Expect(2) = 1e-053
Identities = 46/75 (61%), Positives = 64/75 (85%)
Frame = +1 / +2
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F++++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 257 SGASKVTVKDVSFKDVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 436
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 437 NAKGSATGCLKELAC 481
Score = 112 bits (240), Expect(2) = 1e-053
Identities = 42/68 (61%), Positives = 56/68 (82%)
Frame = +1 / +2
Query: 292 RYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQ 471
R DEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVLTAS + +ENI+ME+ +NPIIID
Sbjct: 47 READEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDM 226
Query: 472 YFCPQKVC 495
+CP K+C
Sbjct: 227 KYCPNKIC 250
Score = 90.4 bits (191), Expect(2) = 7e-030
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 483 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 304
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 303 TSLKETSLTVTLE 265
Score = 62.0 bits (129), Expect(2) = 7e-030
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQ 336
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 249 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQ 91
>gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id49d07 5', DNA sequence
Length = 624
Score = 210 bits (454), Expect = 2e-053
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI+G+ L+SKFFH+ + S D+ + V+I AP NTDGVH+ GSSNVR+T+S +
Sbjct: 16 NATITGVTSLDSKFFHVTVVGSHDVAIHRVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVA 195
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDCVS+GPG+ V+V+ ++CGPG GISVG LGRY E+DV + V +C L T+NGVR
Sbjct: 196 TGDDCVSVGPGASDVVVSGVSCGPGHGISVGSLGRYPGEEDVRRLRVANCTLAGTSNGVR 375
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ + L FE+I M +V NPIIIDQ +CP C
Sbjct: 376 IKTWRGGTWPTAVTGLVFEDIVMRKVHNPIIIDQEYCPYASC 501
Score = 108 bits (231), Expect(2) = 2e-028
Identities = 55/124 (44%), Positives = 62/124 (50%)
Frame = -1 / -2
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL V Q PR PTLMPCPGP T T PGP ETQSS
Sbjct: 380 LMRTPLEVPARVQLATRSRRTSSSPGYLPRLPTLMPCPGPHDTPDTTTSEAPGPTETQSS 201
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIV 15
PV E V RTLE+P TPSV GA M T + S + + WKNL S + P IV
Sbjct: 200 PVATAESVTRTLEEPWMCTPSVLGLLRGARMLTRWIATSWLPTTVTWKNLLSSDVTPVIV 21
Query: 14 PLVS 3
++
Sbjct: 20 AFLT 9
Score = 38.6 bits (78), Expect(2) = 2e-028
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 486 LGAEVLVDDDGVGHLLHPDVLEGEMG 409
+GA +LVDDDGV L H DVLE E G
Sbjct: 492 VGAVLLVDDDGVVDLPHDDVLEDEAG 415
>gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002670, DNA
sequence
Length = 668
Score = 210 bits (454), Expect = 2e-053
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI+G+ L+SKFFH+ + S D+ + V+I AP NTDGVH+ GSSNVR+T+S +
Sbjct: 45 NATITGVTSLDSKFFHVTVVGSHDVAIHRVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVA 224
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDCVS+GPG+ V+V+ ++CGPG GISVG LGRY E+DV + V +C L T+NGVR
Sbjct: 225 TGDDCVSVGPGASDVVVSGVSCGPGHGISVGSLGRYPGEEDVRRLRVANCTLAGTSNGVR 404
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ + L FE+I M +V NPIIIDQ +CP C
Sbjct: 405 IKTWRGGTWPTAVTGLVFEDIVMRKVHNPIIIDQEYCPYASC 530
Score = 108 bits (231), Expect(2) = 2e-028
Identities = 55/124 (44%), Positives = 62/124 (50%)
Frame = -1 / -2
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL V Q PR PTLMPCPGP T T PGP ETQSS
Sbjct: 409 LMRTPLEVPARVQLATRSRRTSSSPGYLPRLPTLMPCPGPHDTPDTTTSEAPGPTETQSS 230
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIV 15
PV E V RTLE+P TPSV GA M T + S + + WKNL S + P IV
Sbjct: 229 PVATAESVTRTLEEPWMCTPSVLGLLRGARMLTRWIATSWLPTTVTWKNLLSSDVTPVIV 50
Query: 14 PLVS 3
++
Sbjct: 49 AFLT 38
Score = 38.6 bits (78), Expect(2) = 2e-028
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 486 LGAEVLVDDDGVGHLLHPDVLEGEMG 409
+GA +LVDDDGV L H DVLE E G
Sbjct: 521 VGAVLLVDDDGVVDLPHDDVLEDEAG 444
>gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221077, DNA
sequence
Length = 666
Score = 210 bits (454), Expect = 2e-053
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI+G+ L+SKFFH+ + S D+ + V+I AP NTDGVH+ GSSNVR+T+S +
Sbjct: 92 NATITGVTSLDSKFFHVTVVGSHDVAIHRVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVA 271
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDCVS+GPG+ V+V+ ++CGPG GISVG LGRY E+DV + V +C L T+NGVR
Sbjct: 272 TGDDCVSVGPGASDVVVSGVSCGPGHGISVGSLGRYPGEEDVRRLRVANCTLAGTSNGVR 451
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ + L FE+I M +V NPIIIDQ +CP C
Sbjct: 452 IKTWRGGTWPTAVTGLVFEDIVMRKVHNPIIIDQEYCPYASC 577
Score = 108 bits (231), Expect(2) = 2e-028
Identities = 55/124 (44%), Positives = 62/124 (50%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL V Q PR PTLMPCPGP T T PGP ETQSS
Sbjct: 456 LMRTPLEVPARVQLATRSRRTSSSPGYLPRLPTLMPCPGPHDTPDTTTSEAPGPTETQSS 277
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIV 15
PV E V RTLE+P TPSV GA M T + S + + WKNL S + P IV
Sbjct: 276 PVATAESVTRTLEEPWMCTPSVLGLLRGARMLTRWIATSWLPTTVTWKNLLSSDVTPVIV 97
Query: 14 PLVS 3
++
Sbjct: 96 AFLT 85
Score = 38.6 bits (78), Expect(2) = 2e-028
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 486 LGAEVLVDDDGVGHLLHPDVLEGEMG 409
+GA +LVDDDGV L H DVLE E G
Sbjct: 568 VGAVLLVDDDGVVDLPHDDVLEDEAG 491
>gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221077, DNA
sequence
Length = 582
Score = 210 bits (454), Expect = 2e-053
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N TI+G+ L+SKFFH+ + S D+ + V+I AP NTDGVH+ GSSNVR+T+S +
Sbjct: 92 NATITGVTSLDSKFFHVTVVGSHDVAIHRVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVA 271
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDCVS+GPG+ V+V+ ++CGPG GISVG LGRY E+DV + V +C L T+NGVR
Sbjct: 272 TGDDCVSVGPGASDVVVSGVSCGPGHGISVGSLGRYPGEEDVRRLRVANCTLAGTSNGVR 451
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ + L FE+I M +V NPIIIDQ +CP C
Sbjct: 452 IKTWRGGTWPTAVTGLVFEDIVMRKVHNPIIIDQEYCPYASC 577
Score = 108 bits (231), Expect(2) = 2e-028
Identities = 55/124 (44%), Positives = 62/124 (50%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL V Q PR PTLMPCPGP T T PGP ETQSS
Sbjct: 456 LMRTPLEVPARVQLATRSRRTSSSPGYLPRLPTLMPCPGPHDTPDTTTSEAPGPTETQSS 277
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIV 15
PV E V RTLE+P TPSV GA M T + S + + WKNL S + P IV
Sbjct: 276 PVATAESVTRTLEEPWMCTPSVLGLLRGARMLTRWIATSWLPTTVTWKNLLSSDVTPVIV 97
Query: 14 PLVS 3
++
Sbjct: 96 AFLT 85
Score = 38.6 bits (78), Expect(2) = 2e-028
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 486 LGAEVLVDDDGVGHLLHPDVLEGEMG 409
+GA +LVDDDGV L H DVLE E G
Sbjct: 568 VGAVLLVDDDGVVDLPHDDVLEDEAG 491
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 210 bits (454), Expect = 2e-053
Identities = 78/126 (61%), Positives = 100/126 (79%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
NG +SGI LLN+KFFH+N+ KD+ +KDV +TAP D NTDG+H+G SS V I N+ IG
Sbjct: 378 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 199
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
GDDC+SIGPG+ V + +TCGPG GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+R
Sbjct: 198 VGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLR 19
Query: 370 IKSYED 387
IK+YED
Sbjct: 18 IKAYED 1
Score = 130 bits (278), Expect = 4e-029
Identities = 61/126 (48%), Positives = 69/126 (54%)
Frame = -1 / +2
Query: 386 SSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPME 207
SSY L+R PL+VF S Q RPR P LMP PGP V T +PGPME
Sbjct: 2 SSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 181
Query: 206 TQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLI 27
QSSP PM M T ++ P W PSV S GAV TS MSL + MWKNL SS+I
Sbjct: 182 MQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVI 361
Query: 26 PEIVPL 9
P+ PL
Sbjct: 362 PDTSPL 379
>gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216193, DNA
sequence
Length = 690
Score = 200 bits (431), Expect = 3e-050
Identities = 81/167 (48%), Positives = 114/167 (68%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N + + +N KFFH+ + T K+I + + I+AP++ NTDG+H+ SS ++IT++ I
Sbjct: 587 NTVVRDVTSVNPKFFHMALLTVKNIRMSGLKISAPSNSPNTDGIHIERSSGIQITDTRIS 408
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+SIG G+D V + + CGPG G+SVG LGRY E DV+ V VRD TTNGVR
Sbjct: 407 TGDDCISIGQGNDNVQIARVQCGPGHGMSVGSLGRYASEGDVTRVHVRDMTFTGTTNGVR 228
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRS 510
IK++E++ S A+H+ FEN+ M++V NPIIIDQ +CP C K S
Sbjct: 227 IKTWENSPSKSHAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKVS 87
Score = 87.7 bits (185), Expect(2) = 3e-021
Identities = 48/110 (43%), Positives = 56/110 (50%)
Frame = -1 / +1
Query: 512 LLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQX 333
+L L Q GQ +WSM+MG TS + MFSK A + S+ LMRTP VV +
Sbjct: 85 VLTLCSQL**GQYFWSMIMGFWTSFMTMFSKTMCAAWLLEGEFSHVLMRTPFVVPVKVMS 264
Query: 332 XXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPM 183
RP+ PTLMP PGP T SLP PME QSSPV M
Sbjct: 265 RTWTRVTSPSLAYRPKLPTLMPWPGPHCTRAICTLSLP*PMEMQSSPVLM 414
Score = 35.4 bits (71), Expect(2) = 3e-021
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1 / +1
Query: 143 WTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
W PSV GA++ + M L VS MWKNL
Sbjct: 454 WMPSVLGLLDGALILSPLIRMFLTVSSAMWKNL 552
>gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 704
Score = 122 bits (260), Expect(2) = 3e-050
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V++KDVTF+NI+GTSSTPEAVSLLCS+ PCSGV++ ++ VEY G NNKTMAVC NAK
Sbjct: 523 SKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDNIKVEYKGTNNKTMAVCQNAK 344
Query: 697 GTAKGSLQALDC 732
G+A G L+ L C
Sbjct: 343 GSATGCLKELAC 308
Score = 98.7 bits (209), Expect(2) = 3e-050
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +1 / -2
Query: 331 RDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
+DC LR T+NGVRIKSYEDA V+TAS L +ENI M++VANPIIID +CP K+C K
Sbjct: 703 KDCTLRKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK 530
Score = 95.9 bits (203), Expect(2) = 4e-033
Identities = 45/76 (59%), Positives = 53/76 (69%)
Frame = -1 / +3
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+Q+ + R P+A+PLA HTAMVLL +P YSTL TPL G +SEQSRLTASGVD+VP
Sbjct: 306 KQASSLRQPVALPLAF*HTAMVLLLVPLYSTLMLSMVTPLQGILSEQSRLTASGVDEVPV 485
Query: 554 MLRKVTSLMETCEELL 507
M VTSL T E L
Sbjct: 486 MFLNVTSLTVTLESPL 533
Score = 67.5 bits (141), Expect(2) = 4e-033
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -3 / +2
Query: 507 SLAGADLLGAEVLVDDDGVGHLLHPDVLEGEMGRREHRLGILVRLDAHAVGGVPKHAI 334
+L ADL+GA + VDDDGVGH++H VL E+G +H G+LV LD A+ G+ + A+
Sbjct: 527 TLGSADLVGAVLHVDDDGVGHVVHGYVLVVELGGSDHARGVLVGLDPDAIAGLSERAV 700
>gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943198, DNA
sequence
Length = 624
Score = 199 bits (429), Expect = 5e-050
Identities = 80/165 (48%), Positives = 113/165 (68%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N + G+ +N KFFH+ + ++ + + + I+APA NTDG+H+ S+ V IT++ IG
Sbjct: 594 NTAVRGVTSVNPKFFHMALLQARGVRMSGLRISAPAGSPNTDGIHIERSAGVSITDARIG 415
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+SIG G+DGV V + CGPG G+SVG LGRY E DV+ V VRD V T NGVR
Sbjct: 414 TGDDCISIGQGNDGVDVARVRCGPGHGMSVGSLGRYAGEGDVTRVRVRDVVFTGTDNGVR 235
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
IK++E++ + +A+H+ FE++ M +V NPIIIDQ +CP C K
Sbjct: 234 IKTWENSPTKSSAAHMLFESLLMVDVRNPIIIDQKYCPYYTCEHK 100
Score = 127 bits (273), Expect = 2e-028
Identities = 67/153 (43%), Positives = 78/153 (50%)
Frame = -1 / +2
Query: 482 GQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXX 303
GQ +WSMMMG TS++ SK A+ S+ LMRTPL V + T
Sbjct: 122 GQYFWSMMMGFRTSTMSKLSKSMCAALLLVGEFSHVLMRTPLSVPVKTTSRTRTRVTSPS 301
Query: 302 XXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFS 123
RPR PTLMP PGP T TPSLP PME QSSPVPM VM T W PSV
Sbjct: 302 PAYRPRLPTLMPWPGPHRTRATSTPSLPWPMEMQSSPVPMRASVMDTPALRSMWMPSVLG 481
Query: 122 TSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIP 24
AGA++ + L S MWKNL + + P
Sbjct: 482 LPAGALIRSPLIRTPLACSSAMWKNLGFTDVTP 580
>gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f075k21, DNA
sequence
Length = 720
Score = 198 bits (426), Expect = 1e-049
Identities = 80/158 (50%), Positives = 111/158 (70%)
Frame = +1 / -1
Query: 37 LNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIG 216
+N KFFH+ + T K+I + + I+AP++ NTDG+H+ SS ++IT++ I TGDDC+SIG
Sbjct: 714 VNPKFFHMALLTVKNIRMSGLKISAPSNSPNTDGIHIERSSGIQITDTRISTGDDCISIG 535
Query: 217 PGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAES 396
G+D V + + CGPG G+SVG LGRY E DV+ V VRD TTNGVRIK++E++ S
Sbjct: 534 QGNDNVQIARVQCGPGHGMSVGSLGRYASEGDVTRVHVRDMTFTGTTNGVRIKTWENSPS 355
Query: 397 VLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRS 510
A+H+ FEN+ M++V NPIIIDQ +CP C K S
Sbjct: 354 KSHAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKVS 241
Score = 87.7 bits (185), Expect(2) = 3e-021
Identities = 48/110 (43%), Positives = 56/110 (50%)
Frame = -1 / +2
Query: 512 LLRLPGQTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQX 333
+L L Q GQ +WSM+MG TS + MFSK A + S+ LMRTP VV +
Sbjct: 239 VLTLCSQL**GQYFWSMIMGFWTSFMTMFSKTMCAAWLLEGEFSHVLMRTPFVVPVKVMS 418
Query: 332 XXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPM 183
RP+ PTLMP PGP T SLP PME QSSPV M
Sbjct: 419 RTWTRVTSPSLAYRPKLPTLMPWPGPHCTRAICTLSLP*PMEMQSSPVLM 568
Score = 35.4 bits (71), Expect(2) = 3e-021
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1 / +2
Query: 143 WTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
W PSV GA++ + M L VS MWKNL
Sbjct: 608 WMPSVLGLLDGALILSPLIRMFLTVSSAMWKNL 706
>gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505460, DNA
sequence
Length = 674
Score = 196 bits (422), Expect = 5e-049
Identities = 79/165 (47%), Positives = 112/165 (67%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N + G+ +N KFFH+ + ++ + + + I+APA NTDG+H+ S+ V IT++ IG
Sbjct: 103 NTAVRGVTSVNPKFFHMALLQARGVRMSGLRISAPAGSPNTDGIHIERSAGVSITDARIG 282
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+SIG G+DGV V + CGPG G+SVG LGRY E DV+ V VRD V T NGVR
Sbjct: 283 TGDDCISIGQGNDGVDVARVRCGPGHGMSVGSLGRYAGEGDVTRVRVRDVVFTGTDNGVR 462
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGK 504
IK++E++ + +A+H+ FE++ M +V NPIII Q +CP C K
Sbjct: 463 IKTWENSPTKSSAAHMLFESLLMVDVRNPIIIXQKYCPYYTCEHK 597
Score = 120 bits (256), Expect = 4e-026
Identities = 65/153 (42%), Positives = 76/153 (49%)
Frame = -1 / -1
Query: 482 GQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXX 303
GQ + MMMG TS++ SK A+ S+ LMRTPL V + T
Sbjct: 575 GQYFCXMMMGFRTSTMSKLSKSMCAALLLVGEFSHVLMRTPLSVPVKTTSRTRTRVTSPS 396
Query: 302 XXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFS 123
RPR PTLMP PGP T TPSLP PME QSSPVPM VM T W PSV
Sbjct: 395 PAYRPRLPTLMPWPGPHRTRATSTPSLPWPMEMQSSPVPMRASVMDTPALRSMWMPSVLG 216
Query: 122 TSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIP 24
AGA++ + L S MWKNL + + P
Sbjct: 215 LPAGALIRSPLIRTPLACSSAMWKNLGFTDVTP 117
>gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 3', mRNA sequence
Length = 567
Score = 125 bits (267), Expect(2) = 6e-049
Identities = 46/75 (61%), Positives = 63/75 (84%)
Frame = +1 / +3
Query: 217 PGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAES 396
PG+ V + +TCGPG+GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA S
Sbjct: 3 PGTTKVNITGVTCGPGRGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAAS 182
Query: 397 VLTASHLTFENIRME 441
VLTAS + +ENI+++
Sbjct: 183 VLTASKIHYENIKIQ 227
Score = 93.2 bits (197), Expect(2) = 6e-049
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +1 / +1
Query: 568 STPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSLQALDC 732
S+PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC NAKG+A G L+ L C
Sbjct: 223 SSPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELAC 387
Score = 81.3 bits (171), Expect(2) = 3e-028
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVD 567
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+D
Sbjct: 389 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLD 222
Score = 68.0 bits (142), Expect(2) = 3e-028
Identities = 35/74 (47%), Positives = 41/74 (55%)
Frame = -1 / -3
Query: 437 ILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPG 258
ILMFS +AVST++ASSY L+R PL+VF S Q RPR P LMP PG
Sbjct: 223 ILMFS**ILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPRPG 44
Query: 257 PQVMLFTMTPSLPG 216
P V T +PG
Sbjct: 43 PHVTPVMFTLVVPG 2
>gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C04_A002 3', mRNA sequence
Length = 591
Score = 121 bits (259), Expect(2) = 1e-048
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +1
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 175 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 354
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 355 NAKGSATGCLKELAC 399
Score = 93.6 bits (198), Expect(2) = 1e-048
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = +1 / +1
Query: 328 VRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
V+DC L+ T+NG+RIK+YEDA SVLTAS + ENI+ME+ +NPIIID +CP K+C
Sbjct: 1 VKDCTLKKTSNGLRIKAYEDAASVLTASKIHHENIKMEDSSNPIIIDMRYCPNKIC 168
Score = 91.3 bits (193), Expect(2) = 9e-030
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 401 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 222
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 221 TFLKETSLTVTLE 183
Score = 60.6 bits (126), Expect(2) = 9e-030
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQ 336
Q GQ SM+MG SSILMFS +AVST++ASSY L+R PL+VF S Q
Sbjct: 167 QILLGQYLMSMIMGFDESSILMFSWWILEAVSTEAASSYALIRRPLLVFFSVQ 9
>gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 3', mRNA sequence
Length = 699
Score = 89.0 bits (188), Expect(3) = 9e-046
Identities = 34/57 (59%), Positives = 49/57 (85%)
Frame = +1 / +1
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMA 678
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNK A
Sbjct: 241 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKGSA 411
Score = 84.9 bits (179), Expect(3) = 9e-046
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +1 / +3
Query: 268 GISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVL 402
GIS+G LGRYKDEKDV+D+ V+DC L+ T+NG+RIK+YEDA SVL
Sbjct: 6 GISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVL 140
Score = 67.5 bits (141), Expect(3) = 5e-024
Identities = 32/54 (59%), Positives = 37/54 (68%)
Frame = -1 / -2
Query: 677 AMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCE 516
A+ LLFLP YSTLT TP+ G +SEQSRLTASG+ +VP K TSL T E
Sbjct: 410 ALPLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTFLKETSLTVTLE 249
Score = 50.1 bits (103), Expect(3) = 9e-046
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 145 ASKIHYENIKMEDSSNPIIIDMKYCPNKIC 234
Score = 48.7 bits (100), Expect(3) = 5e-024
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -1 / -3
Query: 413 WDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMP 267
W ST++ASSY L+R PL+VF S Q RPR P LMP
Sbjct: 151 WRRXSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMP 5
Score = 34.1 bits (68), Expect(3) = 5e-024
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3 / -1
Query: 498 GADLLGAEVLVDDDGVGHLLHPDVLEGEMG 409
GAD + A + VDD+GV +LH DVL ++G
Sbjct: 237 GADFVRAVLHVDDNGVRRVLHLDVLIVDLG 148
>gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 479
Score = 121 bits (259), Expect(2) = 2e-045
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +2
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 164 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 343
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 344 NAKGSATGCLKELAC 388
Score = 91.3 bits (193), Expect(2) = 3e-029
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -3
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 390 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 211
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 210 TFLKETSLTVTLE 172
Score = 83.1 bits (175), Expect(2) = 2e-045
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1 / +2
Query: 352 TTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
T+NG+RIK+YEDA SVLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 14 TSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 157
Score = 58.8 bits (122), Expect(2) = 3e-029
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = -1 / -3
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLS 342
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S
Sbjct: 156 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFSS 4
>gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 445
Score = 121 bits (259), Expect(2) = 2e-045
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1 / +2
Query: 508 SNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCS 687
S +S V++KDV+F+N++GTS++PEAVSLLCS+ PC+GV++ +V VEY+GKNNKTMAVC
Sbjct: 164 SGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQ 343
Query: 688 NAKGTAKGSLQALDC 732
NAKG+A G L+ L C
Sbjct: 344 NAKGSATGCLKELAC 388
Score = 91.3 bits (193), Expect(2) = 3e-029
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 734 RQSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPE 555
+ + + R P+A+PLA HTAMVLLFLP YSTLT TP+ G +SEQSRLTASG+ +VP
Sbjct: 390 KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPV 211
Query: 554 MLRKVTSLMETCE 516
K TSL T E
Sbjct: 210 TFLKETSLTVTLE 172
Score = 83.1 bits (175), Expect(2) = 2e-045
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1 / +2
Query: 352 TTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
T+NG+RIK+YEDA SVLTAS + +ENI+ME+ +NPIIID +CP K+C
Sbjct: 14 TSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKIC 157
Score = 58.8 bits (122), Expect(2) = 3e-029
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = -1 / -2
Query: 494 QTFWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLS 342
Q GQ + SM+MG SSILMFS +AVST++ASSY L+R PL+VF S
Sbjct: 156 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFSS 4
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 826,642,296
Number of Sequences: 832831
Number of extensions: 10894808
Number of successful extensions: 104790
Number of sequences better than 1.0e-020: 136
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 29731174452
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)