TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3185308.2.2
(697 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 281 8e-075
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 227 1e-058
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 226 4e-058
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 150 2e-035
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 149 3e-035
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 148 8e-035
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 144 2e-033
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 139 3e-032
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 91 4e-032
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 88 3e-031
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 136 3e-031
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 84 7e-031
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 84 7e-031
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 77 2e-028
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 77 2e-028
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 127 2e-028
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 127 2e-028
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 78 2e-027
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 78 2e-027
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 123 2e-027
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 123 2e-027
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 123 2e-027
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 123 2e-027
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 88 6e-027
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 91 3e-026
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 80 1e-024
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 80 1e-024
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 84 5e-024
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 80 9e-024
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 78 9e-024
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 74 1e-023
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 74 1e-023
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 74 1e-023
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 73 2e-023
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 73 2e-023
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 73 3e-023
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 73 3e-023
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 84 8e-023
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 77 8e-023
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 74 1e-022
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 68 4e-022
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 68 4e-022
gb|CW433351.1|CW433351 fsbb001f148i13f0 Sorghum methylation... 70 7e-022
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 73 1e-021
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 73 1e-021
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 91 1e-021
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 73 1e-021
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 68 1e-021
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 68 1e-021
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 104 1e-021
gb|CW381842.1|CW381842 fsbb001f063g24k0 Sorghum methylation... 104 2e-021
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 66 3e-021
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 68 3e-021
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 66 6e-021
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 66 6e-021
>gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 281 bits (608), Expect = 8e-075
Identities = 118/158 (74%), Positives = 125/158 (79%)
Frame = -1 / +2
Query: 655 LKGPKGXXVXXXXXXAXXXXXGXXGEHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGG 476
LKG KG V A G GEHF L + AFLKI KAGIVPITYRKVAC +GG
Sbjct: 131 LKGSKGTVVVTATNQAPPPVSGQKGEHFDLTMPAFLKIDEEKAGIVPITYRKVACARQGG 310
Query: 475 IRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESL 296
IRYTITGN +Y+ V VTNVGGAGDVVAL VKGNKRVKWTPMKRSWGQLW TEV+LTGESL
Sbjct: 311 IRYTITGNPNYNMVMVTNVGGAGDVVALSVKGNKRVKWTPMKRSWGQLWITEVNLTGESL 490
Query: 295 TFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF*GRI 182
TFRVMT DHRKATSWHV PRDW++ KTYQATKNF* RI
Sbjct: 491 TFRVMTGDHRKATSWHVAPRDWKYDKTYQATKNF*DRI 604
Score = 231 bits (498), Expect = 1e-059
Identities = 106/158 (67%), Positives = 109/158 (68%)
Frame = +3 / -1
Query: 183 IRP*KFLVAWYVLPNCQSRGVTCQEVALRWSAVMTRNVSDSPVRSTSVVQSWPQLRFIGV 362
IR *KFLVAWYVL QSRG TCQEVALRWS VMTRNVSDSPVR TSV+QS PQLRFIGV
Sbjct: 603 IRS*KFLVAWYVLSYFQSRGATCQEVALRWSPVMTRNVSDSPVRLTSVIQSCPQLRFIGV 424
Query: 363 HLTRLLPFTHXXXXXXXXXXLVTFTSL*CWFPVIVYRMPPFXXHATLR*VMGTMPAXXXA 542
HLTRLLPFT LVT T L* FPV+VYRMPP HATLR*VMGTMPA +
Sbjct: 423 HLTRLLPFTDSATTSPAPPTLVTITML*FGFPVMVYRMPPCLAHATLR*VMGTMPAFSSS 244
Query: 543 ILRNAXMXXXKCSPXXPXXXXXAXXXXXXTXXPLGPLS 656
ILRNA M KCSP P A T PL PLS
Sbjct: 243 ILRNAGMVRSKCSPFCPLTGGGAWLVAVTTTVPLEPLS 130
Score = 210 bits (453), Expect = 2e-053
Identities = 99/169 (58%), Positives = 103/169 (60%)
Frame = +2 / -3
Query: 161 RGSAPRPDPTLEVLGGLVRFAELPVAGRDVPGGSLAVVGGHDAERQRLAGEVDLRGPELA 340
R P DP LEVLGGLV F LPVAGRDVPGG LAVV GHDAERQRLAGEVDLR PEL+
Sbjct: 625 RRGRPEDDPILEVLGGLVCFVVLPVAGRDVPGGGLAVVAGHDAERQRLAGEVDLRDPELS 446
Query: 341 PAALHRRPLDALVALHPQRHHVPXXXXXXXXXXXXXXXPCDRVPDAAFPXARHLAVXXXX 520
PAALHRRPLDALVALH QRHHVP P D VPDAA P ARHLA+
Sbjct: 445 PAALHRRPLDALVALHRQRHHVPGAAHVGHHHHVVVRVPRDGVPDAALPRARHLAIGDGH 266
Query: 521 XXXXXXXXXEERXYXXXKVLALXPAXXXXGXXXXXXHXXALGALEXXXR 667
EER + +VLAL PA G ALGALE R
Sbjct: 265 NAGLLLVDLEERRHGEVEVLALLPADRRRGLVGGRHDHGALGALELVAR 119
Score = 137 bits (294), Expect(3) = 2e-051
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = -3 / +1
Query: 362 DADEAQLGPALDHGGRPHRRVADVPRHDRRPPQGYLLARHAPRLAVRQNVPGHQELLGSD 183
DADEAQLG ALDHGG+PHRRVADVPRHDRRPPQG+LLAR APRL VRQN+PGHQELLGSD
Sbjct: 424 DADEAQLGTALDHGGQPHRRVADVPRHDRRPPQGHLLARRAPRLEVRQNIPGHQELLGSD 603
Score = 101 bits (216), Expect = 9e-021
Identities = 44/73 (60%), Positives = 47/73 (64%)
Frame = +1 / -2
Query: 451 GSL*SCTGCRLSXRTPPCGR*WARCRPXPXRS*GTPVXXXQSARPXARXXXXGPXXXXXP 630
GS * CTGCRL+ RTPPC R*WA+CRP P RS*GTP +SARP AR GP
Sbjct: 335 GSP*WCTGCRLASRTPPCDR*WAQCRPSPRRS*GTPAW*GRSARPSAR*PAAGPGWWPSR 156
Query: 631 PXRPWGP*AXXTR 669
P PW P*A TR
Sbjct: 155 PRCPWSP*ARSTR 117
Score = 80.8 bits (170), Expect(3) = 2e-051
Identities = 39/75 (52%), Positives = 39/75 (52%)
Frame = -3 / +1
Query: 668 RVXXAQGPQGRXGGXXXXXGPXXXXRAXGRALXXXHTGVPQDXXXXXXXXXXHLPQGGVR 489
RV AQG QG G GP RA GRAL H GVPQD HL QGGVR
Sbjct: 118 RVLRAQGLQGHRGRDGHQPGPAAGQRAEGRALRPHHAGVPQDRRGEGRHCAHHLSQGGVR 297
Query: 488 XERRHPVHDHREPAL 444
RRHPVH H EP L
Sbjct: 298 EARRHPVHHHGEPEL 342
Score = 24.4 bits (47), Expect(3) = 2e-051
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / +3
Query: 408 GTWWRC 391
GTWWRC
Sbjct: 378 GTWWRC 395
>gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942159, DNA
sequence
Length = 654
Score = 227 bits (491), Expect = 1e-058
Identities = 90/130 (69%), Positives = 107/130 (82%)
Frame = -1 / -2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L + AFL+IA KAGIVP++YR+VAC +GGIRY I GN++++ V VTNVGGAGDV
Sbjct: 548 EHFDLSMPAFLQIAEEKAGIVPVSYRRVACARQGGIRYAIAGNKYFNMVTVTNVGGAGDV 369
Query: 400 VALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 221
A+ VKG+KRVKWT +KR+WG +W T DLT ESLTFRVMT DHRKATSWHV P DW+FG
Sbjct: 368 AAVSVKGSKRVKWTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKFG 189
Query: 220 KTYQATKNF* 191
TYQA+KNF*
Sbjct: 188 VTYQASKNF* 159
Score = 168 bits (362), Expect = 7e-041
Identities = 78/130 (60%), Positives = 83/130 (63%)
Frame = +3 / +1
Query: 192 *KFLVAWYVLPNCQSRGVTCQEVALRWSAVMTRNVSDSPVRSTSVVQSWPQLRFIGVHLT 371
*KFL AWYV PN QS G TC +VALRWS V+T NVSDS VRS+ V + PQLRF VHLT
Sbjct: 160 *KFLDAWYVTPNFQSSGRTCHDVALRWSPVITLNVSDSQVRSSPVCHTTPQLRFSSVHLT 339
Query: 372 RLLPFTHXXXXXXXXXXLVTFTSL*CWFPVIVYRMPPFXXHATLR*VMGTMPAXXXAILR 551
RLLPFT LVT T L FP + YRMPP HAT R* GTMPA AI R
Sbjct: 340 RLLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWR 519
Query: 552 NAXMXXXKCS 581
NA M KCS
Sbjct: 520 NAGMDRSKCS 549
Score = 121 bits (258), Expect = 1e-026
Identities = 64/131 (48%), Positives = 67/131 (51%)
Frame = +2 / +3
Query: 188 TLEVLGGLVRFAELPVAGRDVPGGSLAVVGGHDAERQRLAGEVDLRGPELAPAALHRRPL 367
+LEVLG LVR AELPV G DVP LAVV GH ERQRLAGEV P P AL RPL
Sbjct: 156 SLEVLGRLVRDAELPVLGEDVPRRGLAVVAGHHPERQRLAGEVLPGLPHYPPVALQLRPL 335
Query: 368 DALVALHPQRHHVPXXXXXXXXXXXXXXXPCDRVPDAAFPXARHLAVXXXXXXXXXXXXX 547
DAL LH R HV P D VPDAA P ARH V
Sbjct: 336 DALAPLHRHRRHVAGAAHVGDRHHVEVLVPGDGVPDAALPRARHPPVGDGHDAGLLLRDL 515
Query: 548 EERXYXXXKVL 580
EER + +VL
Sbjct: 516 EERRHGQVEVL 548
>gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118204, DNA
sequence
Length = 597
Score = 226 bits (487), Expect = 4e-058
Identities = 89/130 (68%), Positives = 106/130 (81%)
Frame = -1 / -2
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
EHF L + AF +IA KAGIVP++YR+VAC +GGIRY I GN++++ V VTNVGGAGDV
Sbjct: 593 EHFDLSMPAFFQIAEEKAGIVPVSYRRVACARQGGIRYAIAGNKYFNMVTVTNVGGAGDV 414
Query: 400 VALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 221
A+ VKG+KRVKWT +KR+WG +W T DLT ESLTFRVMT DHRKATSWHV P DW+FG
Sbjct: 413 AAVSVKGSKRVKWTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKFG 234
Query: 220 KTYQATKNF* 191
TYQA+KNF*
Sbjct: 233 VTYQASKNF* 204
Score = 167 bits (359), Expect = 2e-040
Identities = 77/130 (59%), Positives = 83/130 (63%)
Frame = +3 / +1
Query: 192 *KFLVAWYVLPNCQSRGVTCQEVALRWSAVMTRNVSDSPVRSTSVVQSWPQLRFIGVHLT 371
*KFL AWYV PN QS G TC +VALRWS V+T NVSDS VRS+ V + PQLRF VHLT
Sbjct: 205 *KFLDAWYVTPNFQSSGRTCHDVALRWSPVITLNVSDSQVRSSPVCHTTPQLRFSSVHLT 384
Query: 372 RLLPFTHXXXXXXXXXXLVTFTSL*CWFPVIVYRMPPFXXHATLR*VMGTMPAXXXAILR 551
RLLPFT LVT T L FP + YRMPP HAT R* GTMPA AI +
Sbjct: 385 RLLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWK 564
Query: 552 NAXMXXXKCS 581
NA M KCS
Sbjct: 565 NAGMDRSKCS 594
Score = 121 bits (258), Expect = 1e-026
Identities = 64/131 (48%), Positives = 67/131 (51%)
Frame = +2 / +3
Query: 188 TLEVLGGLVRFAELPVAGRDVPGGSLAVVGGHDAERQRLAGEVDLRGPELAPAALHRRPL 367
+LEVLG LVR AELPV G DVP LAVV GH ERQRLAGEV P P AL RPL
Sbjct: 201 SLEVLGRLVRDAELPVLGEDVPRRGLAVVAGHHPERQRLAGEVLPGLPHYPPVALQLRPL 380
Query: 368 DALVALHPQRHHVPXXXXXXXXXXXXXXXPCDRVPDAAFPXARHLAVXXXXXXXXXXXXX 547
DAL LH R HV P D VPDAA P ARH V
Sbjct: 381 DALAPLHRHRRHVAGAAHVGDRHHVEVLVPGDGVPDAALPRARHPPVGDGHDAGLLLRDL 560
Query: 548 EERXYXXXKVL 580
EER + +VL
Sbjct: 561 EERRHGQVEVL 593
>gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11198028, DNA
sequence
Length = 626
Score = 150 bits (322), Expect = 2e-035
Identities = 55/128 (42%), Positives = 83/128 (64%)
Frame = -1 / -3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I +AG++P+ YR+V+C GGIR+ I+G+ ++ V +TNVGGAG V
Sbjct: 588 HFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNVGGAGAVA 409
Query: 397 ALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 218
A W+ G W M R+WG+ W + +LTG++L+F+V T D + + +V P +WQFG
Sbjct: 408 AAWIMGTGGTDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAPANWQFGS 229
Query: 217 TYQATKNF 194
TYQA+ NF
Sbjct: 228 TYQASVNF 205
>gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889716, DNA
sequence
Length = 581
Score = 149 bits (321), Expect = 3e-035
Identities = 55/128 (42%), Positives = 83/128 (64%)
Frame = -1 / -1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I +AG++P+ YR+V+C GGIR+ I+G+ ++ V +TNVGGAG V
Sbjct: 551 HFDMLQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNVGGAGAVA 372
Query: 397 ALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 218
A W+ G W M R+WG+ W + +LTG++L+F+V T D + + +V P +WQFG
Sbjct: 371 AAWIMGTGGTDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAPANWQFGS 192
Query: 217 TYQATKNF 194
TYQA+ NF
Sbjct: 191 TYQASVNF 168
>gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 148 bits (318), Expect = 8e-035
Identities = 55/128 (42%), Positives = 82/128 (64%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I +AG++P+ YR+V+C GGIR+ I+G+ ++ V +TNVGGAG V
Sbjct: 60 HFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNVGGAGAVA 239
Query: 397 ALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 218
A W+ G W M R+WG+ W + LTG++L+F+V T D + + +V P +WQFG
Sbjct: 240 AAWIMGTGGTDWLAMSRNWGENWQSGAYLTGKALSFKVQTDDGKVVVADNVAPANWQFGS 419
Query: 217 TYQATKNF 194
TYQA+ NF
Sbjct: 420 TYQASVNF 443
>gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f225c11, DNA
sequence
Length = 510
Score = 144 bits (308), Expect = 2e-033
Identities = 51/112 (45%), Positives = 76/112 (67%)
Frame = -1 / -1
Query: 529 AGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMK 350
AG++P+ YR+V+C GGIR+ I+G+ ++ V +TNVGGAG V A W+ G W M
Sbjct: 510 AGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNVGGAGAVAAAWIMGTGGTDWLAMS 331
Query: 349 RSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
R+WG+ W + +LTG++L+F+V T D + + +V P +WQFG TYQA+ NF
Sbjct: 330 RNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAPANWQFGSTYQASVNF 175
>gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 139 bits (299), Expect = 3e-032
Identities = 63/95 (66%), Positives = 67/95 (70%)
Frame = -1 / +3
Query: 655 LKGPKGXXVXXXXXXAXXXXXGXXGEHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGG 476
LKG KG V A G GEHF L + AFLKI KAGIVPITYRKVAC +GG
Sbjct: 321 LKGSKGTVVVTATNQAPPPVSGQKGEHFDLTMPAFLKIDEEKAGIVPITYRKVACARQGG 500
Query: 475 IRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKR 371
IRYTITGN +Y+ V VTNVGGAGDVVAL VKGNKR
Sbjct: 501 IRYTITGNPNYNMVMVTNVGGAGDVVALSVKGNKR 605
Score = 111 bits (237), Expect = 1e-023
Identities = 53/96 (55%), Positives = 55/96 (57%)
Frame = +3 / -1
Query: 369 TRLLPFTHXXXXXXXXXXLVTFTSL*CWFPVIVYRMPPFXXHATLR*VMGTMPAXXXAIL 548
TRLLPFT LVT T L* FPV+VYRMPP HATLR*VMGTMPA +IL
Sbjct: 607 TRLLPFTDSATTSPAPPTLVTITML*FGFPVMVYRMPPCLAHATLR*VMGTMPAFSSSIL 428
Query: 549 RNAXMXXXKCSPXXPXXXXXAXXXXXXTXXPLGPLS 656
RNA M KCSP P A T PL PLS
Sbjct: 427 RNAGMVRSKCSPFCPLTGGGAWLVAVTTTVPLEPLS 320
Score = 101 bits (216), Expect = 9e-021
Identities = 44/73 (60%), Positives = 47/73 (64%)
Frame = +1 / -2
Query: 451 GSL*SCTGCRLSXRTPPCGR*WARCRPXPXRS*GTPVXXXQSARPXARXXXXGPXXXXXP 630
GS * CTGCRL+ RTPPC R*WA+CRP P RS*GTP +SARP AR GP
Sbjct: 525 GSP*WCTGCRLASRTPPCDR*WAQCRPSPRRS*GTPAW*GRSARPSAR*PAAGPGWWPSR 346
Query: 631 PXRPWGP*AXXTR 669
P PW P*A TR
Sbjct: 345 PRCPWSP*ARSTR 307
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 90.9 bits (192), Expect(2) = 4e-032
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL+IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 457 HFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 636
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 637 SVSIKGS 657
Score = 68.4 bits (143), Expect(2) = 4e-032
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V +D R TS V P WQFG+T++ +
Sbjct: 667 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 831
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 88.1 bits (186), Expect(2) = 3e-031
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
H + AFL+IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 122 HLDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 301
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 302 SVSIKGS 322
Score = 68.4 bits (143), Expect(2) = 3e-031
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V +D R TS V P WQFG+T++ +
Sbjct: 332 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 496
>gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207725, DNA
sequence
Length = 531
Score = 136 bits (292), Expect = 3e-031
Identities = 49/108 (45%), Positives = 72/108 (66%)
Frame = -1 / -2
Query: 517 PITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWG 338
P+ YR+V+C GGIR+ I+G+ ++ V +TNVGGAG V A W+ G W M R+WG
Sbjct: 530 PVNYRRVSCQRSGGIRFAISGHDYFDLVTITNVGGAGAVAAAWIMGTGGTDWLAMSRNWG 351
Query: 337 QLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
+ W + +LTG++L+F+V T D + + +V P +WQFG TYQA+ NF
Sbjct: 350 ENWQSGANLTGKALSFKVQTDDGKVVVADNVAPANWQFGSTYQASVNF 207
>gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_F04_A002 3', mRNA sequence
Length = 718
Score = 84.5 bits (178), Expect(2) = 7e-031
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I +F KIA KAGI+PI YR+V C +GG+R+++ G + V ++NVGGAGDV
Sbjct: 13 HFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVR 192
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 193 SVKIKGTE 216
Score = 70.7 bits (148), Expect(2) = 7e-031
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W D+ G+ L+F + ++D + TS++V P+DW++GKTY
Sbjct: 223 WLSMGRNWGQVWHINCDMRGQPLSFELSSSDGKTLTSFNVVPKDWEYGKTY 375
>gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D07_A002 3', mRNA sequence
Length = 686
Score = 84.5 bits (178), Expect(2) = 7e-031
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L I +F KIA KAGI+PI YR+V C +GG+R+++ G + V ++NVGGAGDV
Sbjct: 11 HFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVR 190
Query: 397 ALWVKGNK 374
++ +KG +
Sbjct: 191 SVKIKGTE 214
Score = 70.7 bits (148), Expect(2) = 7e-031
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTY 212
W M R+WGQ+W D+ G+ L+F + ++D + TS++V P+DW++GKTY
Sbjct: 221 WLSMGRNWGQVWHINCDMRGQPLSFELSSSDGKTLTSFNVVPKDWEYGKTY 373
>gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 711
Score = 77.1 bits (162), Expect(2) = 2e-028
Identities = 27/68 (39%), Positives = 45/68 (66%)
Frame = -1 / -2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ +I AG++P+ Y++V C GG+R+ I G+Q++ V + N+GG+G V
Sbjct: 482 HFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNIQNLGGSGSVG 303
Query: 397 ALWVKGNK 374
A WVKG++
Sbjct: 302 AAWVKGDR 279
Score = 69.8 bits (146), Expect(2) = 2e-028
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = -1 / -2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
R W M R+WG W L G+ L+F V T + W+V PR WQFG+TY T+NF
Sbjct: 281 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 102
>gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 704
Score = 77.1 bits (162), Expect(2) = 2e-028
Identities = 27/68 (39%), Positives = 45/68 (66%)
Frame = -1 / -1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ +I AG++P+ Y++V C GG+R+ I G+Q++ V + N+GG+G V
Sbjct: 482 HFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNIQNLGGSGSVG 303
Query: 397 ALWVKGNK 374
A WVKG++
Sbjct: 302 AAWVKGDR 279
Score = 69.8 bits (146), Expect(2) = 2e-028
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = -1 / -1
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
R W M R+WG W L G+ L+F V T + W+V PR WQFG+TY T+NF
Sbjct: 281 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 102
>gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899280, DNA
sequence
Length = 685
Score = 127 bits (271), Expect = 2e-028
Identities = 50/129 (38%), Positives = 74/129 (57%)
Frame = -1 / +1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + A+ +I + GIVP+ +R+V C +GG+R+T++G ++ V VTNV GAG V
Sbjct: 64 QHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFTVSGRDYFELVLVTNVAGAGAV 243
Query: 400 VALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 221
A+ V+G W PM R+WG W + L G+ L+FRV D + V P W FG
Sbjct: 244 RAMDVRGTSSAGWMPMSRNWGANWQSLAYLNGQGLSFRVTADDGQTVVFADVVPPSWTFG 423
Query: 220 KTYQATKNF 194
+TY + F
Sbjct: 424 QTYASRLQF 450
>gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113147, DNA
sequence
Length = 521
Score = 127 bits (271), Expect = 2e-028
Identities = 50/129 (38%), Positives = 74/129 (57%)
Frame = -1 / -3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + A+ +I + GIVP+ +R+V C +GG+R+T++G ++ V VTNV GAG V
Sbjct: 507 QHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFTVSGRDYFELVLVTNVAGAGAV 328
Query: 400 VALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFG 221
A+ V+G W PM R+WG W + L G+ L+FRV D + V P W FG
Sbjct: 327 RAMDVRGTSSAGWMPMSRNWGANWQSLAYLNGQGLSFRVTADDGQTVVFADVVPPSWTFG 148
Query: 220 KTYQATKNF 194
+TY + F
Sbjct: 147 QTYASRLQF 121
>gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 3', mRNA sequence
Length = 847
Score = 78.0 bits (164), Expect(2) = 2e-027
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I AG+VP+ Y++V C GG+R+++ G+Q++ V + N+GG+G V
Sbjct: 35 HFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNIQNLGGSGSVG 214
Query: 397 ALWVKGNK 374
A WVKG+K
Sbjct: 215 AAWVKGDK 238
Score = 65.7 bits (137), Expect(2) = 2e-027
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W L G+ L+F V T + W+V P WQFG+TY T+NF
Sbjct: 245 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPGWWQFGQTYSTTQNF 415
>gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117h02, DNA
sequence
Length = 725
Score = 78.0 bits (164), Expect(2) = 2e-027
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = -1 / -2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I AG+VP+ Y++V C GG+R+++ G+Q++ V + N+GG+G V
Sbjct: 544 HFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNIQNLGGSGSVG 365
Query: 397 ALWVKGNK 374
A WVKG+K
Sbjct: 364 AAWVKGDK 341
Score = 65.7 bits (137), Expect(2) = 2e-027
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W L G+ L+F V T + W+V P WQFG+TY T+NF
Sbjct: 334 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPGWWQFGQTYSTTQNF 164
>gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894229, DNA
sequence
Length = 704
Score = 123 bits (264), Expect = 2e-027
Identities = 48/101 (47%), Positives = 67/101 (66%)
Frame = -1 / +1
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLWTT 323
+VAC KGGIR+TI G+ +++ V VTNVGGAGDV A+ VKG + W + R+WGQ W +
Sbjct: 139 RVACNKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKGERSAGWQALSRNWGQNWQS 318
Query: 322 EVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
L G++L+FRV T+D R S + PR W FG+T+ +
Sbjct: 319 NTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQ 441
>gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477484, DNA
sequence
Length = 612
Score = 123 bits (264), Expect = 2e-027
Identities = 48/101 (47%), Positives = 67/101 (66%)
Frame = -1 / +1
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLWTT 323
+VAC KGGIR+TI G+ +++ V VTNVGGAGDV A+ VKG + W + R+WGQ W +
Sbjct: 46 RVACNKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKGERSAGWQALSRNWGQNWQS 225
Query: 322 EVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
L G++L+FRV T+D R S + PR W FG+T+ +
Sbjct: 226 NTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQ 348
>gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137o10, DNA
sequence
Length = 727
Score = 123 bits (264), Expect = 2e-027
Identities = 48/101 (47%), Positives = 67/101 (66%)
Frame = -1 / +3
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLWTT 323
+VAC KGGIR+TI G+ +++ V VTNVGGAGDV A+ VKG + W + R+WGQ W +
Sbjct: 33 RVACNKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKGERSAGWQALSRNWGQNWQS 212
Query: 322 EVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
L G++L+FRV T+D R S + PR W FG+T+ +
Sbjct: 213 NTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQ 335
>gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_D09_A002 3', mRNA sequence
Length = 664
Score = 123 bits (264), Expect = 2e-027
Identities = 46/128 (35%), Positives = 76/128 (59%)
Frame = -1 / +1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AF KI GI+P+ Y++V C +GG+R+++ G+ +++ V VTNV AG +
Sbjct: 55 HFDMAQPAFEKIGVYSGGIIPVMYKRVPCVKRGGVRFSVNGHDYFNLVLVTNVAAAGSIK 234
Query: 397 ALWVKGNKRVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGK 218
++ VK + W+PM R+WG W + LTG+ L+FR+ D + V P+ W+FG+
Sbjct: 235 SMEVKTSNSSNWSPMARNWGANWHSLAYLTGQMLSFRLTDTDGQTIEFTDVVPQGWKFGQ 414
Query: 217 TYQATKNF 194
T+ + F
Sbjct: 415 TFASKLQF 438
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 87.7 bits (185), Expect(2) = 6e-027
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + AFL+IA +A IVP+TYR+VAC GGIR+ + G ++++ V ++NVGGAGDVV
Sbjct: 533 HFDLSMPAFLRIADYRASIVPVTYRRVACRKSGGIRFGVNGFRYFNLVLISNVGGAGDVV 712
Query: 397 ALWVKGN 377
VK +
Sbjct: 713 RAAVKAS 733
Score = 54.2 bits (112), Expect(2) = 6e-027
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 367 KWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWH 248
+W P+ R+WGQ W L G +L+FRV T+D R TSW+
Sbjct: 740 EWLPLARNWGQNWQCSSILVGGALSFRVTTSDRRTLTSWN 859
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 90.9 bits (192), Expect(2) = 3e-026
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL+IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 461 HFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 640
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 641 SVSIKGS 661
Score = 48.7 bits (100), Expect(2) = 3e-026
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATS 254
W PM R+WGQ W + L G+SL+F+V +D R TS
Sbjct: 671 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTS 781
>gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466904, DNA
sequence
Length = 694
Score = 79.9 bits (168), Expect(2) = 1e-024
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I +AGI+P+ Y++V C GG+R++I G+Q++ V + NVGG+G V
Sbjct: 513 HFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNIQNVGGSGAVG 334
Query: 397 ALWVKGNK 374
A WVKG+K
Sbjct: 333 AAWVKGDK 310
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W L G+ L+F V T + +V P WQFG T+ +NF
Sbjct: 303 WIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTFGTNRNF 133
>gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f048n17, DNA
sequence
Length = 683
Score = 79.9 bits (168), Expect(2) = 1e-024
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I +AGI+P+ Y++V C GG+R++I G+Q++ V + NVGG+G V
Sbjct: 12 HFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNIQNVGGSGAVG 191
Query: 397 ALWVKGNK 374
A WVKG+K
Sbjct: 192 AAWVKGDK 215
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W L G+ L+F V T + +V P WQFG T+ +NF
Sbjct: 222 WIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTFGTNRNF 392
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FL IA +AGIVP++YR+V C GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 302 HFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIV 481
Query: 397 ALWVKGN 377
VK +
Sbjct: 482 RASVKAS 502
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATS 254
W M R+WGQ W + L G++L+FRV +D R +TS
Sbjct: 512 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRTSTS 622
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 79.9 bits (168), Expect(2) = 9e-024
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ I +AGI+P+ Y++V C GG+R++I G+Q++ V + NVGG+G V
Sbjct: 378 HFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNIQNVGGSGAVG 199
Query: 397 ALWVKGNK 374
A WVKG+K
Sbjct: 198 AAWVKGDK 175
Score = 51.5 bits (106), Expect(2) = 9e-024
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKN 197
W M R+WG W L G+ L+F V T + +V P WQFG T+ +N
Sbjct: 168 WIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTFGTNRN 1
>gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157513, DNA
sequence
Length = 637
Score = 77.6 bits (163), Expect(2) = 9e-024
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = -1 / -2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ KI GI+P+ Y++V C GG+R++I GN ++ V + N+ G+G V
Sbjct: 564 HFDMSQPAWEKIGIYSGGIIPVQYQQVKCWRNGGVRFSIAGNYYFLLVNIQNLAGSGSVA 385
Query: 397 ALWVKGNK 374
A WVKG+K
Sbjct: 384 AAWVKGDK 361
Score = 53.8 bits (111), Expect(2) = 9e-024
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -1 / -2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W L G+ L+F V + +V P WQFG T+ +NF
Sbjct: 354 WIQMSRNWGANWQAHAGLVGQGLSFAVTSTGGHYIQFLNVVPGWWQFGMTFNTNQNF 184
>gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186356, DNA
sequence
Length = 698
Score = 73.9 bits (155), Expect(2) = 1e-023
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = -1 / -3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + ++ KI + GI+P+ Y++V C GG+R+ I G+ ++ V + N+GG+G V
Sbjct: 651 HFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNIQNLGGSGSVG 472
Query: 397 ALWVKG 380
A WVKG
Sbjct: 471 AAWVKG 454
Score = 57.0 bits (118), Expect(2) = 1e-023
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -1 / -3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W LTG++L+F V T + +V P WQFG+TY + F
Sbjct: 441 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 271
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 73.9 bits (155), Expect(2) = 1e-023
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = -1 / -1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + ++ KI + GI+P+ Y++V C GG+R+ I G+ ++ V + N+GG+G V
Sbjct: 412 HFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNIQNLGGSGSVG 233
Query: 397 ALWVKG 380
A WVKG
Sbjct: 232 AAWVKG 215
Score = 57.0 bits (118), Expect(2) = 1e-023
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -1 / -1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W LTG++L+F V T + +V P WQFG+TY + F
Sbjct: 202 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 32
>gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189567, DNA
sequence
Length = 675
Score = 73.9 bits (155), Expect(2) = 1e-023
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = -1 / -3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + ++ KI + GI+P+ Y++V C GG+R+ I G+ ++ V + N+GG+G V
Sbjct: 460 HFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNIQNLGGSGSVG 281
Query: 397 ALWVKG 380
A WVKG
Sbjct: 280 AAWVKG 263
Score = 57.0 bits (118), Expect(2) = 1e-023
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -1 / -3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W LTG++L+F V T + +V P WQFG+TY + F
Sbjct: 250 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 80
>gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 692
Score = 73.5 bits (154), Expect(2) = 2e-023
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = -1 / -1
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + DL G++L+F+V +D R TS + P WQFG+T++ +
Sbjct: 374 RTGWQPMSRNWGQNWQSNADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQ 201
Score = 56.5 bits (117), Expect(2) = 2e-023
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = -1 / -1
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ ++G++
Sbjct: 500 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSR 372
>gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137329, DNA
sequence
Length = 593
Score = 73.5 bits (154), Expect(2) = 2e-023
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + DL G++L+F+V +D R TS + P WQFG+T++ +
Sbjct: 380 RTGWQPMSRNWGQNWQSNADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQ 553
Score = 56.5 bits (117), Expect(2) = 2e-023
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = -1 / +2
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ ++G++
Sbjct: 254 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSR 382
>gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889911, DNA
sequence
Length = 766
Score = 73.0 bits (153), Expect(2) = 3e-023
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -1 / -3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
R W PM R+WGQ W + DL G++L+F+V +D R TS + P WQFG+T++
Sbjct: 272 RTGWQPMSRNWGQNWQSNADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFE 108
Score = 56.5 bits (117), Expect(2) = 3e-023
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = -1 / -3
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ ++G++
Sbjct: 398 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSR 270
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 72.5 bits (152), Expect(2) = 3e-023
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = -1 / +3
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + ++ KI GIVP+ Y++V+C GG+R+TI GN+++ V + NV G G +
Sbjct: 267 QHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSI 446
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 447 SAVQIKGS 470
Score = 57.0 bits (118), Expect(2) = 3e-023
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W DLT +S++FRV + R ++V +WQ G+T+ +NF
Sbjct: 480 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQNF 650
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 84.5 bits (178), Expect(2) = 8e-023
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = -1 / +3
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF L + FL IA +AGIVP++YR+V C GG+R+TI G ++++ V +TNV GAGD+V
Sbjct: 510 HFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIV 689
Query: 397 ALWVKGN 377
VK +
Sbjct: 690 RASVKAS 710
Score = 43.7 bits (89), Expect(2) = 8e-023
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHR 266
W M R+WGQ W + L G++L+FRV +D R
Sbjct: 720 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRR 818
>gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211147, DNA
sequence
Length = 736
Score = 77.1 bits (162), Expect(2) = 8e-023
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQ 209
W M R+WGQ W + L G++L+FRV +D R +TSW+ PR+WQFG+T++
Sbjct: 236 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRTSTSWNAAPRNWQFGQTFE 391
Score = 51.0 bits (105), Expect(2) = 8e-023
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = -1 / +2
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
+V C GG+R+TI G ++++ V +TNV GAGD+V VK +
Sbjct: 101 RVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKAS 226
>gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112648, DNA
sequence
Length = 611
Score = 74.4 bits (156), Expect(2) = 1e-022
Identities = 27/68 (39%), Positives = 45/68 (66%)
Frame = -1 / -1
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + A+ KI GI+P+ YR+V+C KGG+R+T+ G+ +++ V +TNV G G +
Sbjct: 500 HFDMAQPAWEKIGVFSGGIIPVIYRRVSCVRKGGVRFTVNGHDYFNLVLLTNVAGPGSIR 321
Query: 397 ALWVKGNK 374
A+ V+ +K
Sbjct: 320 AMDVRSSK 297
Score = 52.8 bits (109), Expect(2) = 1e-022
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -1 / -1
Query: 370 VKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
V W M R+WG W + LTG+ L+FRV D + V P W+FG+++ + F
Sbjct: 290 VDWMHMARNWGANWHSLRYLTGQGLSFRVTVTDGQTIVFADVVPPKWRFGQSFSSKLQF 114
>gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 719
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V +D R TS V P WQFG+T++ +
Sbjct: 537 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 701
Score = 57.4 bits (119), Expect(2) = 4e-022
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = -1 / +3
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ +KG+
Sbjct: 402 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 527
>gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 715
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -1 / -3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
W PM R+WGQ W + L G+SL+F+V +D R TS V P WQFG+T++ +
Sbjct: 344 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 180
Score = 57.4 bits (119), Expect(2) = 4e-022
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = -1 / -3
Query: 502 KVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
+V C KGGIR+TI G+ +++ V VTNV GAGDV ++ +KG+
Sbjct: 479 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 354
>gb|CW433351.1|CW433351 fsbb001f148i13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148i13, DNA
sequence
Length = 752
Score = 69.8 bits (146), Expect(2) = 7e-022
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = -1 / -3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
R W M R+WG W L G+ L+F V T + W+V PR WQFG+TY T+NF
Sbjct: 621 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 442
Score = 55.1 bits (114), Expect(2) = 7e-022
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -1 / -3
Query: 505 RKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
++V C GG+R+ I G+Q++ V + N+GG+G V A WVKG++
Sbjct: 750 QQVKCSRTGGVRFGIAGSQYFLLVNIQNLGGSGSVGAAWVKGDR 619
>gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 673
Score = 73.5 bits (154), Expect(2) = 1e-021
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = -1 / +2
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + DL G++L+F+V +D R TS + P WQFG+T++ +
Sbjct: 116 RTGWQPMSRNWGQNWQSNADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQ 289
Score = 51.0 bits (105), Expect(2) = 1e-021
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 484 KGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
KGGIR+TI G+ +++ V VTNV GAGDV ++ ++G++
Sbjct: 8 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSR 118
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 72.5 bits (152), Expect(2) = 1e-021
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = -1 / +1
Query: 580 EHFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDV 401
+HF + ++ KI GIVP+ Y++V+C GG+R+TI GN+++ V + NV G G +
Sbjct: 277 QHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSI 456
Query: 400 VALWVKGN 377
A+ +KG+
Sbjct: 457 SAVQIKGS 480
Score = 51.9 bits (107), Expect(2) = 1e-021
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -1 / +1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKT 215
W M R+WG W DLT +S++FRV + R ++V +WQ G+T
Sbjct: 490 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQT 639
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 90.9 bits (192), Expect(2) = 1e-021
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = -1 / +2
Query: 577 HFXLXIXAFLKIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVV 398
HF + AFL+IA +AGIVP+ YR+V C KGGIR+TI G+ +++ V VTNV GAGDV
Sbjct: 329 HFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQ 508
Query: 397 ALWVKGN 377
++ +KG+
Sbjct: 509 SVSIKGS 529
Score = 33.6 bits (67), Expect(2) = 1e-021
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1 / +2
Query: 364 WTPMKRSWGQLWTTEVDLTGES 299
W PM R+WGQ W + L G+S
Sbjct: 539 WQPMSRNWGQNWQSNSLLDGQS 604
>gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519350, DNA
sequence
Length = 558
Score = 73.5 bits (154), Expect(2) = 1e-021
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = -1 / +3
Query: 373 RVKWTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATK 200
R W PM R+WGQ W + DL G++L+F+V +D R TS + P WQFG+T++ +
Sbjct: 117 RTGWQPMSRNWGQNWQSNADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQ 290
Score = 51.0 bits (105), Expect(2) = 1e-021
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = -1 / +3
Query: 484 KGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNK 374
KGGIR+TI G+ +++ V VTNV GAGDV ++ ++G++
Sbjct: 9 KGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSR 119
>gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110823, DNA
sequence
Length = 553
Score = 67.5 bits (141), Expect(2) = 1e-021
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = -1 / -1
Query: 547 KIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
KI GIVP+ Y++V+C GG+R+TI GN+++ V + NV G G + A+ +KG+
Sbjct: 547 KIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGS 377
Score = 57.0 bits (118), Expect(2) = 1e-021
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1 / -1
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W DLT +S++FRV + R ++V +WQ G+T+ +NF
Sbjct: 367 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQNF 197
>gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 3', mRNA sequence
Length = 483
Score = 67.5 bits (141), Expect(2) = 1e-021
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = -1 / +3
Query: 547 KIAXXKAGIVPITYRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGN 377
KI GIVP+ Y++V+C GG+R+TI GN+++ V + NV G G + A+ +KG+
Sbjct: 27 KIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGS 197
Score = 57.0 bits (118), Expect(2) = 1e-021
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1 / +3
Query: 364 WTPMKRSWGQLWTTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
W M R+WG W DLT +S++FRV + R ++V +WQ G+T+ +NF
Sbjct: 207 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQNF 377
>gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_A06_A002 3', mRNA sequence
Length = 578
Score = 104 bits (222), Expect = 1e-021
Identities = 42/105 (40%), Positives = 59/105 (56%)
Frame = -1 / +2
Query: 508 YRKVACXXKGGIRYTITGNQHYSEVKVTNVGGAGDVVALWVKGNKRVKWTPMKRSWGQLW 329
+R+V C +GG+R+T++G + V VTNV GAG V A+ V+G W PM R+WG W
Sbjct: 2 FRRVPCRRRGGVRFTVSGRDYLELVLVTNVAGAGAVRAMDVRGTSSAGWMPMSRNWGANW 181
Query: 328 TTEVDLTGESLTFRVMTADHRKATSWHVTPRDWQFGKTYQATKNF 194
+ L G+ L+FRV D + V P W FG+TY + F
Sbjct: 182 QSLAYLNGQGLSFRVTADDGQTVVFAEVVPP*WTFGQTYASRLQF 316
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 617,508,173
Number of Sequences: 832831
Number of extensions: 8833242
Number of successful extensions: 124075
Number of sequences better than 1.0e-020: 56
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21030021714
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)