TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184970.2.1
(1043 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 143 e-102
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 140 1e-077
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 144 1e-075
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 140 4e-074
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 133 5e-073
gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated... 129 3e-066
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 140 4e-066
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 167 5e-066
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 127 3e-063
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 124 2e-060
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 167 7e-057
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 140 3e-055
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 134 6e-055
gb|BE367523.1|BE367523 PI1_8_E06.g1_A002 Pathogen induced 1... 140 1e-054
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 134 7e-054
gb|CF760116.1|CF760116 DSAF1_55_F11.b1_A011 Drought-stresse... 139 1e-051
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 134 2e-050
gb|CW470070.1|CW470070 fsbb001f223b16f0 Sorghum methylation... 135 3e-049
gb|BE366378.1|BE366378 PI1_32_H10.g1_A002 Pathogen induced ... 129 6e-047
gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorgh... 129 3e-044
gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum b... 134 4e-044
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 101 2e-043
gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced ... 107 2e-042
gb|CW206618.1|CW206618 104_635_11187687_148_36965_058 Sorgh... 168 3e-041
gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1... 129 1e-040
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 101 2e-038
gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkal... 95 4e-036
gb|BE358815.1|BE358815 DG1_32_F07.b1_A002 Dark Grown 1 (DG1... 117 2e-034
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 105 2e-034
gb|CW307371.1|CW307371 104_795_11468105_116_35728_073 Sorgh... 82 8e-033
gb|BE594394.1|BE594394 PI1_32_H10.b2_A002 Pathogen induced ... 138 1e-031
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 74 2e-031
gb|CF480059.1|CF480059 POL1_63_B05.g1_A002 Pollen Sorghum b... 116 2e-030
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 100 8e-030
gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum b... 100 2e-029
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 74 4e-027
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 74 4e-027
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 74 4e-027
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 74 5e-027
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 74 5e-027
gb|CW022215.1|CW022215 104_161_10431706_5_30007 Sorghum met... 79 7e-027
gb|BE357050.1|BE357050 DG1_146_F01.b1_A002 Dark Grown 1 (DG... 64 9e-027
gb|CW282926.1|CW282926 104_759_11408975_148_35475_094 Sorgh... 121 2e-026
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 69 2e-026
gb|CX618297.1|CX618297 GABR1_38_F09.g1_A002 GA- or brassino... 60 4e-026
gb|CX607585.1|CX607585 ANR1_29_C07.g1_A002 Anaerobic roots ... 64 5e-026
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 74 1e-025
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 74 1e-025
gb|BE598196.1|BE598196 PI1_66_H02.b1_A002 Pathogen induced ... 91 1e-025
gb|CN125314.1|CN125314 RHOH1_10_G12.b1_A002 Acid- and alkal... 92 1e-025
gb|CW402098.1|CW402098 fsbb001f093d20k0 Sorghum methylation... 91 2e-025
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 73 3e-025
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 73 1e-024
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 73 3e-024
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 73 5e-024
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 67 6e-024
gb|CW184174.1|CW184174 104_600_11165012_116_36684_074 Sorgh... 46 1e-023
gb|CX606941.1|CX606941 ANR1_5_G02.g1_A002 Anaerobic roots S... 64 1e-023
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 74 2e-023
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 67 3e-023
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 73 9e-023
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 70 9e-023
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 72 1e-022
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 66 3e-022
gb|CW175039.1|CW175039 104_587_11157726_116_36573_025 Sorgh... 46 5e-022
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 73 8e-022
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 73 8e-022
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 73 8e-022
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 73 8e-022
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 73 8e-022
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 73 8e-022
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 73 8e-022
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 66 1e-021
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 74 1e-021
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 74 1e-021
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 74 1e-021
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 74 1e-021
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 74 1e-021
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 74 1e-021
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 71 2e-021
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 73 2e-021
gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/c... 73 4e-021
gb|BE125178.1|BE125178 DG1_14_A08.b1_A002 Dark Grown 1 (DG1... 94 4e-021
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 65 5e-021
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 69 5e-021
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 71 9e-021
>gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072j20, DNA
sequence
Length = 740
Score = 143 bits (307), Expect(4) = e-102
Identities = 53/77 (68%), Positives = 61/77 (79%)
Frame = -1 / -1
Query: 941 RNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPD 762
RN+P C A GFYTY AF+ AA++F GFGTTGS + QKRE+AAFL QT HETTGGW +APD
Sbjct: 740 RNKPACPASGFYTYSAFVAAANSFPGFGTTGSPDAQKREVAAFLAQTSHETTGGWASAPD 561
Query: 761 GAFTWGYCYKEENGATA 711
G + WGYCYKEE A A
Sbjct: 560 GPYAWGYCYKEEKDAAA 510
Score = 133 bits (284), Expect(4) = e-102
Identities = 50/72 (69%), Positives = 59/72 (81%)
Frame = -1 / -1
Query: 593 DATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRL 414
+A A +L +P+LVA+DA +SF+TA+WFWMT QPPKPSCH V T QW PS AD AAGRL
Sbjct: 392 EAIGAAGILDDPDLVATDATVSFETAVWFWMTPQPPKPSCHAVVTGQWAPSPADTAAGRL 213
Query: 413 PGYGVITNIING 378
PGYGV+TNIING
Sbjct: 212 PGYGVVTNIING 177
Score = 105 bits (223), Expect(4) = 1e-056
Identities = 50/76 (65%), Positives = 53/76 (69%)
Frame = +1 / +1
Query: 712 AVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVM 891
A A FSSL*Q*PQ PSGA PPVVSC VC +NAA+SRFW S LPVVPKP N AA
Sbjct: 511 AAASFSSL*Q*PQA*GPSGADAHPPVVSCDVCARNAATSRFWASGLPVVPKPGNELAAAT 690
Query: 892 KASYV*KPRALQSGSL 939
KA V*KP A +G L
Sbjct: 691 KAE*V*KPLAGHAGLL 738
Score = 80.8 bits (170), Expect(4) = e-102
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -1 / -1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECG G + +VA+R FY YCD+LG+SYG+N+DC NQRPFNS
Sbjct: 185 INGGLECGHGADSRVADRIGFYKRYCDLLGVSYGNNVDCANQRPFNS 45
Score = 75.8 bits (159), Expect(4) = e-102
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -1 / -1
Query: 683 AQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
A WPC AGKKY+GRGPIQ+SYNYNYGPAGE
Sbjct: 479 ALWPCAAGKKYYGRGPIQISYNYNYGPAGE 390
Score = 69.8 bits (146), Expect(4) = 1e-056
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSG 561
+G HC V T+WHDGLGGC VIQNQ AV E AS AT SG
Sbjct: 241 DGAHCPVTTAWHDGLGGCGVIQNQTAVSNETVASVATRSG 360
Score = 62.5 bits (130), Expect(4) = 1e-056
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +1 / +1
Query: 568 SRSWAMVASSPAGP*L*L*ESWMGPRPKYFLPATHGHWA 684
SR A +SPAGP*L*L*E WMGPRP YF PA HGH A
Sbjct: 364 SRIPAAPMASPAGP*L*L*EIWMGPRP*YFFPAAHGHSA 480
Score = 59.7 bits (124), Expect(4) = 4e-030
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = -3 / -3
Query: 564 QPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
+PG G R L++D LVLDD AAAQAVVPRR H AV + R R +A+G
Sbjct: 363 RPGPGRHRRHRLVRDRRLVLDDAAAAQAVVPRRRHGAVGAVACRHRRRQAAG 208
Score = 45.5 bits (93), Expect(4) = 4e-030
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 912 LLHVRRLHHGGGRVPGLRHHGQHGGPEARARRVLGAD 802
LLH+ L G VPGLRHHG+ P+AR V GAD
Sbjct: 711 LLHLLGLRRGSQLVPGLRHHGEPRRPKARGGGVPGAD 601
Score = 42.8 bits (87), Expect(4) = 4e-030
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 342 QPDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
+PD LL LLR W LR+Q GL QPEA+QQ
Sbjct: 138 RPDRLLQALLRLAWG*LRQQRGLRQPEAIQQ 46
Score = 41.4 bits (84), Expect(4) = 1e-056
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 250 LLKGLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
LL GLWL QS L P*L P SQ* +*K +R AT
Sbjct: 46 LLNGLWLAQSTLLP*LTPSKSQ*RL*KPIRSAT 144
Score = 40.5 bits (82), Expect(4) = 4e-030
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / -3
Query: 684 RPVAVRRRQEVLRPRAHP 631
R VAVRRR+EVLRPRAHP
Sbjct: 480 RAVAVRRREEVLRPRAHP 427
>gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187687, DNA
sequence
Length = 639
Score = 140 bits (300), Expect(4) = 1e-077
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = -1 / -1
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVASD +SF+TA+WFWMT Q PKPSCH V T QW
Sbjct: 435 IQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQW 256
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
TPS AD AAGRLPGYGV+TNIING
Sbjct: 255 TPSGADTAAGRLPGYGVVTNIING 184
Score = 90.4 bits (191), Expect(4) = 1e-077
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1 / -1
Query: 842 EVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYKEENGATA 711
+ QKRELAAFL QT HETTGGW APDGA+ WGYC+KEE GA +
Sbjct: 639 DTQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAAS 508
Score = 85.8 bits (181), Expect(4) = 1e-077
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1 / -1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECGKG + +VA+R FY YCD+LG+SYGDNLDC NQ+PFNS
Sbjct: 192 INGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQKPFNS 52
Score = 72.5 bits (152), Expect(3) = 4e-036
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = -1 / -1
Query: 731 EENGATADYCDMTGEYAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
+E A D QWPC AGKKY+GRGPIQ+SYNYNYG AG+
Sbjct: 531 KEEQGAASGPDYCEPSTQWPCAAGKKYYGRGPIQISYNYNYGAAGQ 394
Score = 71.6 bits (150), Expect(3) = 4e-036
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -3 / -3
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLDD A AQAVVPRR R VD +G RGE +G
Sbjct: 391 HRRRHPRQPGPGGVGPDRVVRDGGVVLDDAAVAQAVVPRRHDRPVDAVGS*HRRGEVAG 215
Score = 65.2 bits (136), Expect(4) = 1e-042
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = +1 / +2
Query: 718 APFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFW 837
AP SSL Q*PQ APSGA PPVVSC V +NAASSRFW
Sbjct: 515 APCSSLKQ*PQA*APSGAVAHPPVVSCEVWARNAASSRFW 634
Score = 63.4 bits (132), Expect(4) = 1e-042
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / +2
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
+GVH V T+WHDGLG C VIQN AV + SDAT SGL
Sbjct: 248 DGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGL 370
Score = 55.6 bits (115), Expect(4) = 1e-042
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +1 / +2
Query: 598 PAGP*L*L*ESWMGPRPKYFLPATHGH 678
PA P*L*L*E WMGPRP YF PA HGH
Sbjct: 398 PAAP*L*L*EIWMGPRP*YFFPAAHGH 478
Score = 47.3 bits (97), Expect(3) = 4e-036
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 339 PDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
PD LL LLR W QLRR LGL QPEALQQ
Sbjct: 142 PDRLLQALLRLAWCQLRR*LGLRQPEALQQ 53
Score = 47.3 bits (97), Expect(4) = 1e-042
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 250 LLKGLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
LLKG WL QSKLSP*L P SQ* +*K +R AT
Sbjct: 53 LLKGFWLAQSKLSP*LTPSKSQ*RL*KPIRSAT 151
Score = 33.1 bits (66), Expect(4) = 1e-077
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+EVLRP HP
Sbjct: 478 VAVRRREEVLRPWTHP 431
>gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468105, DNA
sequence
Length = 603
Score = 144 bits (310), Expect(4) = 1e-075
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = -1 / +1
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVA+DA +SF+TA+WFWMT Q PKPSCHDV T QW
Sbjct: 229 IQISYNYNYGPAGQAIGAGILANPDLVAADATVSFETAVWFWMTPQSPKPSCHDVMTGQW 408
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
TPSAAD AAGRLPGYGV+TNIING
Sbjct: 409 TPSAADIAAGRLPGYGVVTNIING 480
Score = 90.0 bits (190), Expect(4) = 1e-075
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = -1 / +1
Query: 857 TTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYKEE 726
T S +VQKRELAAFL QT HETTGGW APDGA+ WGYC+KEE
Sbjct: 10 TGASPDVQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEE 141
Score = 75.8 bits (159), Expect(4) = 6e-029
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -1 / +1
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
QWPC AGKKY+GRGPIQ+SYNYNYGPAG+
Sbjct: 184 QWPCAAGKKYYGRGPIQISYNYNYGPAGQ 270
Score = 73.9 bits (155), Expect(4) = 7e-044
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = +1 / -2
Query: 724 FSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVV 858
FSSL Q*PQ APSGA PPVVSC VC +NAASSRFWTS L V
Sbjct: 143 FSSLKQ*PQA*APSGAVAHPPVVSCDVCARNAASSRFWTSGLAPV 9
Score = 71.6 bits (150), Expect(4) = 1e-075
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -1 / +1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRP 258
I G+ECG G + +VA+R FY YCD+LG+SYGDNLDC +Q P
Sbjct: 472 INGGLECGHGADTRVADRIGFYKRYCDLLGVSYGDNLDCAHQMP 603
Score = 69.3 bits (145), Expect(4) = 7e-044
Identities = 28/41 (68%), Positives = 29/41 (70%)
Frame = +1 / -2
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
+GVHC V TSWHDGLG C VIQN AV E AS AT SGL
Sbjct: 416 DGVHCPVMTSWHDGLGDCGVIQNHTAVSNETVASAATRSGL 294
Score = 58.3 bits (121), Expect(4) = 7e-044
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 598 PAGP*L*L*ESWMGPRPKYFLPATHGH 678
PAGP*L*L*E WMGPRP YF PA HGH
Sbjct: 266 PAGP*L*L*EIWMGPRP*YFFPAAHGH 186
Score = 57.9 bits (120), Expect(4) = 6e-029
Identities = 29/59 (49%), Positives = 34/59 (57%)
Frame = -3 / +3
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG R L++D +VLDD A AQAVVPRR AVD +G RGE +G
Sbjct: 273 HRRRHPRQPGPCRRRRHRLVRDRGVVLDDAAVAQAVVPRRHDGAVDAVGS*HRRGEVAG 449
Score = 36.8 bits (74), Expect(4) = 1e-075
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+EVLRPR HP
Sbjct: 186 VAVRRREEVLRPRTHP 233
Score = 34.1 bits (68), Expect(4) = 7e-044
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1 / -2
Query: 259 GLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
G+W QSKLSP*L P SQ* +* + AT
Sbjct: 602 GIWWAQSKLSP*LTPSKSQ*RL*NPILSAT 513
Score = 33.1 bits (66), Expect(4) = 6e-029
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3 / +3
Query: 336 DLLLHQLLRHPWHQLRRQLGLLQPEA 259
D +L LLR W QL RQLGL P+A
Sbjct: 525 DRVLQALLRLAWGQLWRQLGLRPPDA 602
Score = 21.7 bits (41), Expect(4) = 6e-029
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3 / +3
Query: 852 GQHGGPEARARRVLGADGA 796
G+ PEARA V GAD A
Sbjct: 15 GEPRRPEARAGGVPGADVA 71
>gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 632
Score = 140 bits (300), Expect(4) = 4e-074
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVASD +SF+TA+WFWMT Q PKPSCH V T QW
Sbjct: 191 IQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQW 370
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
TPS AD AAGRLPGYGV+TNIING
Sbjct: 371 TPSGADTAAGRLPGYGVVTNIING 442
Score = 85.8 bits (181), Expect(4) = 4e-074
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1 / +2
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECGKG + +VA+R FY YCD+LG+SYGDNLDC NQ+PFNS
Sbjct: 434 INGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQKPFNS 574
Score = 78.5 bits (165), Expect(4) = 4e-074
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 821 AAFLGQTGHETTGGWPNAPDGAFTWGYCYKEENGATA 711
AAFL QT HETTGGW APDGA+ WGYC+KEE GA +
Sbjct: 8 AAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAAS 118
Score = 72.5 bits (152), Expect(3) = 4e-036
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = -1 / +2
Query: 731 EENGATADYCDMTGEYAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
+E A D QWPC AGKKY+GRGPIQ+SYNYNYG AG+
Sbjct: 95 KEEQGAASGPDYCEPSTQWPCAAGKKYYGRGPIQISYNYNYGAAGQ 232
Score = 71.6 bits (150), Expect(3) = 4e-036
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -3 / +1
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLDD A AQAVVPRR R VD +G RGE +G
Sbjct: 235 HRRRHPRQPGPGGVGPDRVVRDGGVVLDDAAVAQAVVPRRHDRPVDAVGS*HRRGEVAG 411
Score = 63.4 bits (132), Expect(4) = 3e-039
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -3
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
+GVH V T+WHDGLG C VIQN AV + SDAT SGL
Sbjct: 378 DGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGL 256
Score = 55.6 bits (115), Expect(4) = 3e-039
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +1 / -3
Query: 598 PAGP*L*L*ESWMGPRPKYFLPATHGH 678
PA P*L*L*E WMGPRP YF PA HGH
Sbjct: 228 PAAP*L*L*EIWMGPRP*YFFPAAHGH 148
Score = 53.3 bits (110), Expect(4) = 3e-039
Identities = 25/36 (69%), Positives = 26/36 (72%)
Frame = +1 / -3
Query: 718 APFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAAS 825
AP SSL Q*PQ APSGA PPVVSC V +NAAS
Sbjct: 111 APCSSLKQ*PQA*APSGAVAHPPVVSCEVWARNAAS 4
Score = 47.3 bits (97), Expect(3) = 4e-036
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3 / +1
Query: 339 PDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
PD LL LLR W QLRR LGL QPEALQQ
Sbjct: 484 PDRLLQALLRLAWCQLRR*LGLRQPEALQQ 573
Score = 47.3 bits (97), Expect(4) = 3e-039
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / -3
Query: 250 LLKGLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
LLKG WL QSKLSP*L P SQ* +*K +R AT
Sbjct: 573 LLKGFWLAQSKLSP*LTPSKSQ*RL*KPIRSAT 475
Score = 33.1 bits (66), Expect(4) = 4e-074
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +1
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+EVLRP HP
Sbjct: 148 VAVRRREEVLRPWTHP 195
>gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia92e12 5', DNA sequence
Length = 608
Score = 133 bits (284), Expect(4) = 5e-073
Identities = 50/72 (69%), Positives = 59/72 (81%)
Frame = -1 / -1
Query: 593 DATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRL 414
+A A +L +P+LVA+DA +SF+TA+WFWMT QPPKPSCH V T QW PS AD AAGRL
Sbjct: 383 EAIGAAGILDDPDLVATDATVSFETAVWFWMTPQPPKPSCHAVVTGQWAPSPADTAAGRL 204
Query: 413 PGYGVITNIING 378
PGYGV+TNIING
Sbjct: 203 PGYGVVTNIING 168
Score = 80.8 bits (170), Expect(4) = 5e-073
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -1 / -1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECG G + +VA+R FY YCD+LG+SYG+N+DC NQRPFNS
Sbjct: 176 INGGLECGHGADSRVADRIGFYKRYCDLLGVSYGNNVDCANQRPFNS 36
Score = 75.8 bits (159), Expect(4) = 5e-073
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -1 / -1
Query: 683 AQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
A WPC AGKKY+GRGPIQ+SYNYNYGPAGE
Sbjct: 470 ALWPCAAGKKYYGRGPIQISYNYNYGPAGE 381
Score = 69.8 bits (146), Expect(5) = 1e-036
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSG 561
+G HC V T+WHDGLGGC VIQNQ AV E AS AT SG
Sbjct: 232 DGAHCPVTTAWHDGLGGCGVIQNQTAVSNETVASVATRSG 351
Score = 62.5 bits (130), Expect(5) = 1e-036
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +1 / +1
Query: 568 SRSWAMVASSPAGP*L*L*ESWMGPRPKYFLPATHGHWA 684
SR A +SPAGP*L*L*E WMGPRP YF PA HGH A
Sbjct: 355 SRIPAAPMASPAGP*L*L*EIWMGPRP*YFFPAAHGHSA 471
Score = 59.7 bits (124), Expect(3) = 8e-022
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = -3 / -3
Query: 564 QPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
+PG G R L++D LVLDD AAAQAVVPRR H AV + R R +A+G
Sbjct: 354 RPGPGRHRRHRLVRDRRLVLDDAAAAQAVVPRRRHGAVGAVACRHRRRQAAG 199
Score = 44.6 bits (91), Expect(4) = 5e-073
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / -1
Query: 782 GWPNAPDGAFTWGYCYKEENGATA 711
G +APDG + WGYCYKEE A A
Sbjct: 572 GGASAPDGPYAWGYCYKEEKDAAA 501
Score = 42.8 bits (87), Expect(3) = 8e-022
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 342 QPDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
+PD LL LLR W LR+Q GL QPEA+QQ
Sbjct: 129 RPDRLLQALLRLAWG*LRQQRGLRQPEAIQQ 37
Score = 41.4 bits (84), Expect(5) = 1e-036
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 250 LLKGLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
LL GLWL QS L P*L P SQ* +*K +R AT
Sbjct: 37 LLNGLWLAQSTLLP*LTPSKSQ*RL*KPIRSAT 135
Score = 40.5 bits (82), Expect(3) = 8e-022
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / -3
Query: 684 RPVAVRRRQEVLRPRAHP 631
R VAVRRR+EVLRPRAHP
Sbjct: 471 RAVAVRRREEVLRPRAHP 418
Score = 32.2 bits (64), Expect(5) = 1e-036
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 712 AVAPFSSL*Q*PQVKAPSGAFGQP 783
A A FSSL*Q*PQ PSGA P
Sbjct: 502 AAASFSSL*Q*PQA*GPSGADAPP 573
Score = 22.1 bits (42), Expect(5) = 1e-036
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / +3
Query: 781 PPVVSCPVCPKN 816
PPVVS VC +N
Sbjct: 573 PPVVSRDVCARN 608
>gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_A10_A002 5', mRNA sequence
Length = 693
Score = 129 bits (276), Expect(4) = 3e-066
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = -1 / +3
Query: 575 DLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRLPGYGVI 396
+L+ NP+LV+SD V++FKTAIWFWMT Q PKPSCH V T WTPSA D+AAGRLPGYGV
Sbjct: 492 NLVGNPDLVSSDPVVAFKTAIWFWMTPQSPKPSCHAVMTGSWTPSADDRAAGRLPGYGVT 671
Query: 395 TNIING 378
TNIING
Sbjct: 672 TNIING 689
Score = 113 bits (241), Expect(4) = 3e-066
Identities = 43/66 (65%), Positives = 47/66 (71%)
Frame = -1 / +3
Query: 911 FYTYDAFITAADAFRGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYK 732
F TYDAFI AA F GFGTTG + ++RELAAF GQT HETTGGWP AP G F WGYC
Sbjct: 213 FCTYDAFIEAASKFPGFGTTGDDQTRRRELAAFFGQTSHETTGGWPTAPGGQFAWGYCRV 392
Query: 731 EENGAT 714
+E T
Sbjct: 393 KEQNPT 410
Score = 70.3 bits (147), Expect(2) = 8e-025
Identities = 33/54 (61%), Positives = 33/54 (61%)
Frame = +1 / -3
Query: 739 Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVMKAS 900
Q PQ P GA G PPVVS VCPK AASSR PVVPKP N AA M AS
Sbjct: 385 QYPQANCPPGAVGHPPVVSWDVCPKKAASSRLRVWSSPVVPKPGNLLAASMNAS 224
Score = 68.0 bits (142), Expect(2) = 8e-025
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +3 / -2
Query: 474 ARRLGRLRRHPEPDGRLEGDDGVRRHQLRVAQQV 575
ARRL RLRRHPEPDGRLEG GV RHQ+RVA QV
Sbjct: 593 ARRLRRLRRHPEPDGRLEGHHGVARHQVRVAHQV 492
Score = 39.1 bits (79), Expect(4) = 3e-066
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 653 YFGRGPIQLSYNYNYGPAGE 594
Y+GRGPIQL++ YNY AG+
Sbjct: 420 YYGRGPIQLTHEYNYRQAGQ 479
Score = 29.5 bits (58), Expect(4) = 3e-066
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 989 VASIITEDLFERMLKHRNEPDCK 921
V SIIT +F+ ML HR + C+
Sbjct: 138 VWSIITRPMFQSMLSHRGDSGCQ 206
>gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 600
Score = 140 bits (300), Expect(4) = 4e-066
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVASD +SF+TA+WFWMT Q PKPSCH V T QW
Sbjct: 153 IQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQW 332
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
TPS AD AAGRLPGYGV+TNIING
Sbjct: 333 TPSGADTAAGRLPGYGVVTNIING 404
Score = 85.8 bits (181), Expect(4) = 4e-066
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1 / +3
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECGKG + +VA+R FY YCD+LG+SYGDNLDC NQ+PFNS
Sbjct: 396 INGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQKPFNS 536
Score = 72.1 bits (151), Expect(3) = 6e-036
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
QWPC AGKKY+GRGPIQ+SYNYNYG AG+
Sbjct: 108 QWPCAAGKKYYGRGPIQISYNYNYGAAGQ 194
Score = 71.6 bits (150), Expect(3) = 6e-036
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -3 / +2
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLDD A AQAVVPRR R VD +G RGE +G
Sbjct: 197 HRRRHPRQPGPGGVGPDRVVRDGGVVLDDAAVAQAVVPRRHDRPVDAVGS*HRRGEVAG 373
Score = 63.4 bits (132), Expect(4) = 2e-033
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -3
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
+GVH V T+WHDGLG C VIQN AV + SDAT SGL
Sbjct: 340 DGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGL 218
Score = 55.6 bits (115), Expect(4) = 2e-033
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +1 / -3
Query: 598 PAGP*L*L*ESWMGPRPKYFLPATHGH 678
PA P*L*L*E WMGPRP YF PA HGH
Sbjct: 190 PAAP*L*L*EIWMGPRP*YFFPAAHGH 110
Score = 51.5 bits (106), Expect(4) = 4e-066
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / +3
Query: 788 TGGWPNAPDGAFTWGYCYKEENGATA 711
TGGW APDGA+ GYC+KEE GA +
Sbjct: 3 TGGWATAPDGAYAGGYCFKEEQGAAS 80
Score = 47.3 bits (97), Expect(3) = 6e-036
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3 / +2
Query: 339 PDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
PD LL LLR W QLRR LGL QPEALQQ
Sbjct: 446 PDRLLQALLRLAWCQLRR*LGLRQPEALQQ 535
Score = 47.3 bits (97), Expect(4) = 2e-033
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / -3
Query: 250 LLKGLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
LLKG WL QSKLSP*L P SQ* +*K +R AT
Sbjct: 535 LLKGFWLAQSKLSP*LTPSKSQ*RL*KPIRSAT 437
Score = 33.6 bits (67), Expect(4) = 2e-033
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1 / -3
Query: 718 APFSSL*Q*PQVKAPSGAFGQPPV 789
AP SSL Q*P APSGA PPV
Sbjct: 73 APCSSLKQ*PPA*APSGAVAHPPV 2
Score = 33.1 bits (66), Expect(4) = 4e-066
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+EVLRP HP
Sbjct: 110 VAVRRREEVLRPWTHP 157
>gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072j20, DNA
sequence
Length = 694
Score = 167 bits (359), Expect(3) = 5e-066
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = -1 / +1
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VASII+E LF +ML HRN+P C A GFYTY AF+ AA++F GFGTTGS + QKRE+AAFL
Sbjct: 205 VASIISESLFNQMLLHRNKPACPASGFYTYSAFVAAANSFPGFGTTGSPDAQKREVAAFL 384
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATA 711
QT HETTGGW +APDG + WGYCYKEE A A
Sbjct: 385 AQTSHETTGGWASAPDGPYAWGYCYKEEKDAAA 483
Score = 127 bits (272), Expect(3) = 5e-046
Identities = 61/93 (65%), Positives = 65/93 (69%)
Frame = +1 / -3
Query: 712 AVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVM 891
A A FSSL*Q*PQ PSGA PPVVSC VC +NAA+SRFW S LPVVPKP N AA
Sbjct: 482 AAASFSSL*Q*PQA*GPSGADAHPPVVSCDVCARNAATSRFWASGLPVVPKPGNELAAAT 303
Query: 892 KASYV*KPRALQSGSLRCFSILSKRSSVIMDAT 990
KA V*KP A +G LRC SI KR S +MDAT
Sbjct: 302 KAE*V*KPLAGHAGLLRCSSIWLKRDSEMMDAT 204
Score = 75.8 bits (159), Expect(3) = 5e-066
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -1 / +1
Query: 683 AQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
A WPC AGKKY+GRGPIQ+SYNYNYGPAGE
Sbjct: 514 ALWPCAAGKKYYGRGPIQISYNYNYGPAGE 603
Score = 62.5 bits (130), Expect(3) = 5e-046
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +1 / -3
Query: 568 SRSWAMVASSPAGP*L*L*ESWMGPRPKYFLPATHGHWA 684
SR A +SPAGP*L*L*E WMGPRP YF PA HGH A
Sbjct: 629 SRIPAAPMASPAGP*L*L*EIWMGPRP*YFFPAAHGHSA 513
Score = 49.2 bits (101), Expect(3) = 5e-066
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = -1 / +1
Query: 593 DATIAQDLLSNPELVASDAVISFKTAIWFWM 501
+A A +L +P+LVA+DA +SF+TA+WFWM
Sbjct: 601 EAIGAAGILDDPDLVATDATVSFETAVWFWM 693
Score = 35.0 bits (70), Expect(3) = 5e-046
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 501 HPEPDGRLEGDDGVRRHQLRVAQ 569
HPEPDG LE D GV Q+RV +
Sbjct: 693 HPEPDGGLERDGGVCGDQVRVVE 625
>gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_F07_A002 3', mRNA sequence
Length = 809
Score = 127 bits (272), Expect(5) = 3e-063
Identities = 46/91 (50%), Positives = 59/91 (64%)
Frame = -1 / +1
Query: 965 LFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFLGQTGHETT 786
L+ M KH+++ C A GFY Y +F+ AA+ F FG G +KRE+AAFL Q HETT
Sbjct: 1 LYSDMFKHKDDTACPAHGFYNYTSFLRAAERFPAFGGDGDAATRKREVAAFLAQISHETT 180
Query: 785 GGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
GGW APDG + WG C+KEE ++YCD T
Sbjct: 181 GGWATAPDGPYAWGLCFKEEISPASNYCDNT 273
Score = 105 bits (223), Expect(5) = 3e-063
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = -1 / +1
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ ++N+ + D L NPE+VA D ++FKTA+WFWMT + PKPSCHDV ++
Sbjct: 325 IQLSWNFNYGPAGQALGFDGLGNPEVVAGDPEVAFKTALWFWMTPRSPKPSCHDVMVGRY 504
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
P+ AD AA R G+G+ TNIING
Sbjct: 505 RPTDADVAANRTAGFGLTTNIING 576
Score = 72.5 bits (152), Expect(4) = 1e-033
Identities = 39/87 (44%), Positives = 48/87 (55%)
Frame = +1 / -1
Query: 694 VMSQ*SAVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRN 873
V+SQ* SSL Q P PSGA PPVVSC +C +NAA+SRF + P P
Sbjct: 272 VLSQ*LLAGLISSLKQSPHA*GPSGAVAHPPVVSCEICARNAATSRFRVAASPSPPNAGK 93
Query: 874 ASAAVMKASYV*KPRALQSGSLRCFSI 954
SAA K +*KP A Q+ S C ++
Sbjct: 92 RSAARRKEV*L*KPCAGQAVSSLCLNM 12
Score = 67.0 bits (140), Expect(3) = 2e-022
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = -1 / +1
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
+WPCVAG+ Y GRGPIQLS+N+NYGPAG+
Sbjct: 280 EWPCVAGESYHGRGPIQLSWNFNYGPAGQ 366
Score = 51.9 bits (107), Expect(4) = 1e-033
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1 / -1
Query: 466 TSWHDGLGGCAVIQNQMAVLKEMTASDATSSGLLSRS 576
TSWHDGLG VIQN AVL + S AT+SGL S S
Sbjct: 488 TSWHDGLGDLGVIQNHSAVLNATSGSPATTSGLPSPS 378
Score = 51.5 bits (106), Expect(4) = 1e-033
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -1
Query: 589 ASSPAGP*L*L*ESWMGPRPKYFLPATHGH 678
++ PAGP*L +SWMGPRP Y PATHGH
Sbjct: 371 SACPAGP*LKFHDSWMGPRPWYDSPATHGH 282
Score = 49.6 bits (102), Expect(3) = 2e-022
Identities = 28/54 (51%), Positives = 31/54 (57%)
Frame = -3 / +3
Query: 570 AEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
A QPG G R +QDG +VLDD AQAVVPRR RAV RR G + G
Sbjct: 384 AGQPGGGRR*PRGGVQDGAVVLDDPEVAQAVVPRRHGRAVPADRRRCGGEQDGG 545
Score = 34.5 bits (69), Expect(5) = 3e-063
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILG 300
I GIECGK +V +R F+ YC++LG
Sbjct: 568 INGGIECGKTGVPQVDDRIGFFRRYCELLG 657
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3 / +3
Query: 963 LREDAEAPQRT*LQSSGLLHVRRLHHGGGRVPGLRHHGQHGGPEARARRVLGAD 802
++ +A R L S+ LL + L G G PG+R + EAR V GAD
Sbjct: 3 IQRHVQAQGRHGLPSARLLQLHLLPPGRGTFPGVRRRRRRRHTEARGGGVPGAD 164
Score = 29.0 bits (57), Expect(5) = 3e-063
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 302 GISYGDNLDCYNQRPFNS 249
G+ G NLDC Q+P++S
Sbjct: 658 GVDVGPNLDCTQQQPYSS 711
Score = 24.4 bits (47), Expect(4) = 1e-033
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 452 TARWPRRGTTAW 487
TAR RRGTTAW
Sbjct: 502 TARP*RRGTTAW 467
Score = 23.1 bits (44), Expect(5) = 3e-063
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / +3
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+ V P HP
Sbjct: 282 VAVRRRRVVPWPGTHP 329
>gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254j12, DNA
sequence
Length = 507
Score = 124 bits (266), Expect(3) = 2e-060
Identities = 47/77 (61%), Positives = 55/77 (71%)
Frame = -1 / -3
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVASD +SF+TA+WFWMT Q PKPSCH V T QW
Sbjct: 253 IQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQW 74
Query: 449 TPSAADKAAGRLPGYGV 399
TPS AD AAGRLPGYGV
Sbjct: 73 TPSGADTAAGRLPGYGV 23
Score = 115 bits (246), Expect(3) = 2e-060
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = -1 / -3
Query: 890 ITAADAFRGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYKEENGATA 711
I AA+AF GFGTTG + QKRELAAFL QT HETTGGW APDGA+ WGYC+KEE GA +
Sbjct: 505 IAAANAFPGFGTTGGADTQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEQGAAS 326
Score = 90.0 bits (190), Expect(3) = 3e-041
Identities = 41/58 (70%), Positives = 42/58 (72%)
Frame = +1 / +3
Query: 718 APFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVM 891
AP SSL Q*PQ APSGA PPVVSC V +NAASSRFW S PVVPKP NA AA M
Sbjct: 333 APCSSLKQ*PQA*APSGAVAHPPVVSCEVWARNAASSRFWVSAPPVVPKPGNALAAAM 506
Score = 72.5 bits (152), Expect(4) = 2e-036
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = -1 / -3
Query: 731 EENGATADYCDMTGEYAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
+E A D QWPC AGKKY+GRGPIQ+SYNYNYG AG+
Sbjct: 349 KEEQGAASGPDYCEPSTQWPCAAGKKYYGRGPIQISYNYNYGAAGQ 212
Score = 71.6 bits (150), Expect(4) = 2e-036
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -3 / -2
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLDD A AQAVVPRR R VD +G RGE +G
Sbjct: 209 HRRRHPRQPGPGGVGPDRVVRDGGVVLDDAAVAQAVVPRRHDRPVDAVGS*HRRGEVAG 33
Score = 63.4 bits (132), Expect(3) = 3e-041
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / +3
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
+GVH V T+WHDGLG C VIQN AV + SDAT SGL
Sbjct: 66 DGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGL 188
Score = 55.6 bits (115), Expect(3) = 3e-041
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +1 / +3
Query: 598 PAGP*L*L*ESWMGPRPKYFLPATHGH 678
PA P*L*L*E WMGPRP YF PA HGH
Sbjct: 216 PAAP*L*L*EIWMGPRP*YFFPAAHGH 296
Score = 43.7 bits (89), Expect(4) = 2e-036
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -3 / -2
Query: 891 HHGGGRVPGLRHHGQHGGPEARA 823
H GG RVPGLRHHG+ PE RA
Sbjct: 506 HRGGQRVPGLRHHGRRRHPETRA 438
Score = 33.1 bits (66), Expect(3) = 2e-060
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -2
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+EVLRP HP
Sbjct: 296 VAVRRREEVLRPWTHP 249
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 422 GRLPGYGVITNIING 378
G + G +TNIING
Sbjct: 47 GEVAGVWCVTNIING 3
>gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405587, DNA
sequence
Length = 582
Score = 167 bits (359), Expect(2) = 7e-057
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = -1 / -2
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VASII+E LF +ML HRN+P C A GFYTY AF+ AA++F GFGTTGS + QKRE+AAFL
Sbjct: 431 VASIISESLFNQMLLHRNKPACPASGFYTYSAFVAAANSFPGFGTTGSPDAQKREVAAFL 252
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATA 711
QT HETTGGW +APDG + WGYCYKEE A A
Sbjct: 251 AQTSHETTGGWASAPDGPYAWGYCYKEEKDAAA 153
Score = 127 bits (272), Expect(2) = 5e-041
Identities = 61/93 (65%), Positives = 65/93 (69%)
Frame = +1 / +1
Query: 712 AVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVM 891
A A FSSL*Q*PQ PSGA PPVVSC VC +NAA+SRFW S LPVVPKP N AA
Sbjct: 154 AAASFSSL*Q*PQA*GPSGADAHPPVVSCDVCARNAATSRFWASGLPVVPKPGNELAAAT 333
Query: 892 KASYV*KPRALQSGSLRCFSILSKRSSVIMDAT 990
KA V*KP A +G LRC SI KR S +MDAT
Sbjct: 334 KAE*V*KPLAGHAGLLRCSSIWLKRDSEMMDAT 432
Score = 75.8 bits (159), Expect(2) = 7e-057
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -1 / -2
Query: 683 AQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
A WPC AGKKY+GRGPIQ+SYNYNYGPAGE
Sbjct: 122 ALWPCAAGKKYYGRGPIQISYNYNYGPAGE 33
Score = 62.5 bits (130), Expect(2) = 5e-041
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +1 / +1
Query: 568 SRSWAMVASSPAGP*L*L*ESWMGPRPKYFLPATHGHWA 684
SR A +SPAGP*L*L*E WMGPRP YF PA HGH A
Sbjct: 7 SRIPAAPMASPAGP*L*L*EIWMGPRP*YFFPAAHGHSA 123
>gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_F07_A002 5', mRNA sequence
Length = 723
Score = 140 bits (300), Expect(3) = 3e-055
Identities = 52/99 (52%), Positives = 66/99 (66%)
Frame = -1 / +3
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VASI+TE L+ M KH+++ C A GFY Y +F+ AA+ F FG G +KRE+AAFL
Sbjct: 168 VASIVTEKLYSDMFKHKDDTACPAHGFYNYTSFLRAAERFPAFGGDGDAATRKREVAAFL 347
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
Q HETTGGW APDG + WG C+KEE ++YCD T
Sbjct: 348 AQISHETTGGWATAPDGPYAWGLCFKEEISPASNYCDNT 464
Score = 82.6 bits (174), Expect(3) = 4e-022
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1 / +3
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ ++N+ + D L NPE+VA D ++FKTA+WFWMT + PKPSCHDV ++
Sbjct: 516 IQLSWNFNYGPAGQALGFDGLGNPEVVAGDPEVAFKTALWFWMTPRSPKPSCHDVMVGRY 695
Query: 449 TPSAADKAA 423
P+ AD AA
Sbjct: 696 RPTDADVAA 722
Score = 79.0 bits (166), Expect(3) = 2e-033
Identities = 44/99 (44%), Positives = 54/99 (54%)
Frame = +1 / -3
Query: 694 VMSQ*SAVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRN 873
V+SQ* SSL Q P PSGA PPVVSC +C +NAA+SRF + P P
Sbjct: 463 VLSQ*LLAGLISSLKQSPHA*GPSGAVAHPPVVSCEICARNAATSRFRVAASPSPPNAGK 284
Query: 874 ASAAVMKASYV*KPRALQSGSLRCFSILSKRSSVIMDAT 990
SAA K +*KP A Q+ S C ++ SV +DAT
Sbjct: 283 RSAARRKEV*L*KPCAGQAVSSLCLNMSLYSFSVTIDAT 167
Score = 67.0 bits (140), Expect(3) = 3e-055
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
+WPCVAG+ Y GRGPIQLS+N+NYGPAG+
Sbjct: 471 EWPCVAGESYHGRGPIQLSWNFNYGPAGQ 557
Score = 51.9 bits (107), Expect(3) = 2e-033
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1 / -3
Query: 466 TSWHDGLGGCAVIQNQMAVLKEMTASDATSSGLLSRS 576
TSWHDGLG VIQN AVL + S AT+SGL S S
Sbjct: 679 TSWHDGLGDLGVIQNHSAVLNATSGSPATTSGLPSPS 569
Score = 51.5 bits (106), Expect(3) = 2e-033
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -3
Query: 589 ASSPAGP*L*L*ESWMGPRPKYFLPATHGH 678
++ PAGP*L +SWMGPRP Y PATHGH
Sbjct: 562 SACPAGP*LKFHDSWMGPRPWYDSPATHGH 473
Score = 48.7 bits (100), Expect(3) = 3e-055
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -3 / +2
Query: 570 AEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQG 427
A QPG G R +QDG +VLDD AQAVVPRR RAV RR G
Sbjct: 575 AGQPGGGRR*PRGGVQDGAVVLDDPEVAQAVVPRRHGRAVPADRRRCG 718
Score = 38.2 bits (77), Expect(3) = 4e-022
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = -3 / +2
Query: 1002 ERRWRGVHYHRRSLREDAEAPQRT*LQSSGLLHVRRLHHGGGRVPGLRHHGQHGGPEARA 823
E+ RGV +++ +A R L S+ LL + L G G PG+R + EAR
Sbjct: 155 EQEPRGVDRDGEAIQRHVQAQGRHGLPSARLLQLHLLPPGRGTFPGVRRRRRRRHTEARG 334
Query: 822 RRVLGAD 802
V GAD
Sbjct: 335 GGVPGAD 355
Score = 23.1 bits (44), Expect(3) = 4e-022
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+ V P HP
Sbjct: 473 VAVRRRRVVPWPGTHP 520
>gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_56_F03_A002 5', mRNA sequence
Length = 805
Score = 134 bits (288), Expect(3) = 6e-055
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -1 / +1
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VA++++E L+ + H+++ C A+GFYTY +FI AA F F TG +KRE+AAF
Sbjct: 247 VATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRKREVAAFF 426
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
Q HETTGGW APDG + WG CYKEE + YCD T
Sbjct: 427 AQISHETTGGWATAPDGQYAWGLCYKEEISPASSYCDAT 543
Score = 67.5 bits (141), Expect(3) = 2e-025
Identities = 40/84 (47%), Positives = 44/84 (52%)
Frame = +1 / -3
Query: 694 VMSQ*SAVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRN 873
V SQ* SSL* P PSGA QPPVVS +C K AA+SR PV N
Sbjct: 542 VASQ*LLAGLISSL*HRPHAYCPSGAVAQPPVVS*EICAKKAATSRLRVLRSPVAANLGN 363
Query: 874 ASAAVMKASYV*KPRALQSGSLRC 945
AA MK + V*KP A Q+ S C
Sbjct: 362 VLAAWMKEA*V*KPLAGQAASSLC 291
Score = 65.7 bits (137), Expect(3) = 6e-055
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -1 / +1
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
QWPC GK Y GRGPIQLS+N+NYGPAG+
Sbjct: 550 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQ 636
Score = 54.7 bits (113), Expect(3) = 6e-055
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -3 / +3
Query: 564 QPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQ 430
QPG GG R + DG +VLDD A AQAVVPR R V P GRR+
Sbjct: 660 QPGGGGQLLRDRVPDGAVVLDDAAPAQAVVPRGHGRRVPPHGRRR 794
Score = 44.6 bits (91), Expect(3) = 2e-025
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1 / -3
Query: 445 GVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
G + TSWHDGLG VIQN AV ++ AT+SGL
Sbjct: 779 GRYSPTMTSWHDGLGRRGVIQNHSAVRNAVSEQLATTSGL 660
Score = 43.2 bits (88), Expect(3) = 2e-025
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1 / -3
Query: 589 ASSPAGP*L*L*ESWMGPRPKYFLPATHGH 678
++ PAGP*L +SWMGPRP LP HGH
Sbjct: 641 SACPAGP*LKFHDSWMGPRPW*DLPG*HGH 552
>gb|BE367523.1|BE367523 PI1_8_E06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 140 bits (300), Expect(3) = 1e-054
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVASD +SF+TA+WFWMT Q PKPSCH V T QW
Sbjct: 36 IQISYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQW 215
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
TPS AD AAGRLPGYGV+TNIING
Sbjct: 216 TPSGADTAAGRLPGYGVVTNIING 287
Score = 85.8 bits (181), Expect(3) = 1e-054
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1 / +3
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECGKG + +VA+R FY YCD+LG+SYGDNLDC NQ+PFNS
Sbjct: 279 INGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQKPFNS 419
Score = 71.6 bits (150), Expect(3) = 1e-031
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -3 / +2
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLDD A AQAVVPRR R VD +G RGE +G
Sbjct: 80 HRRRHPRQPGPGGVGPDRVVRDGGVVLDDAAVAQAVVPRRHDRPVDAVGS*HRRGEVAG 256
Score = 63.4 bits (132), Expect(3) = 1e-025
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -1
Query: 442 EGVHCSVATSWHDGLGGCAVIQNQMAVLKEMTASDATSSGL 564
+GVH V T+WHDGLG C VIQN AV + SDAT SGL
Sbjct: 223 DGVHWPVMTAWHDGLGDCGVIQNHTAVSNDTVGSDATRSGL 101
Score = 57.4 bits (119), Expect(3) = 1e-031
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -1 / +3
Query: 665 AGKKYFGRGPIQLSYNYNYGPAGE 594
AGKKY+GRGPIQ+SYNYNYG AG+
Sbjct: 6 AGKKYYGRGPIQISYNYNYGAAGQ 77
Score = 47.3 bits (97), Expect(3) = 1e-031
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3 / +2
Query: 339 PDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
PD LL LLR W QLRR LGL QPEALQQ
Sbjct: 329 PDRLLQALLRLAWCQLRR*LGLRQPEALQQ 418
Score = 47.3 bits (97), Expect(3) = 1e-025
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / -1
Query: 250 LLKGLWL*QSKLSP*LMPRMSQ*LV*KKVRLAT 348
LLKG WL QSKLSP*L P SQ* +*K +R AT
Sbjct: 418 LLKGFWLAQSKLSP*LTPSKSQ*RL*KPIRSAT 320
Score = 45.5 bits (93), Expect(3) = 1e-025
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +1 / -1
Query: 598 PAGP*L*L*ESWMGPRPKYFLPA 666
PA P*L*L*E WMGPRP YF PA
Sbjct: 73 PAAP*L*L*EIWMGPRP*YFFPA 5
Score = 27.6 bits (54), Expect(3) = 1e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 669 RRRQEVLRPRAHP 631
RRR+EVLRP HP
Sbjct: 2 RRREEVLRPWTHP 40
>gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c05, DNA
sequence
Length = 718
Score = 134 bits (288), Expect(3) = 7e-054
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -1 / +3
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VA++++E L+ + H+++ C A+GFYTY +FI AA F F TG +KRE+AAF
Sbjct: 162 VATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRKREVAAFF 341
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
Q HETTGGW APDG + WG CYKEE + YCD T
Sbjct: 342 AQISHETTGGWATAPDGQYAWGLCYKEEISPASSYCDAT 458
Score = 67.5 bits (141), Expect(3) = 9e-025
Identities = 40/84 (47%), Positives = 44/84 (52%)
Frame = +1 / -1
Query: 694 VMSQ*SAVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRN 873
V SQ* SSL* P PSGA QPPVVS +C K AA+SR PV N
Sbjct: 457 VASQ*LLAGLISSL*HRPHAYCPSGAVAQPPVVS*EICAKKAATSRLRVLRSPVAANLGN 278
Query: 874 ASAAVMKASYV*KPRALQSGSLRC 945
AA MK + V*KP A Q+ S C
Sbjct: 277 VLAAWMKEA*V*KPLAGQAASSLC 206
Score = 65.7 bits (137), Expect(3) = 7e-054
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -1 / +3
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
QWPC GK Y GRGPIQLS+N+NYGPAG+
Sbjct: 465 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQ 551
Score = 51.0 bits (105), Expect(3) = 7e-054
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = -3 / +2
Query: 564 QPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQ 430
QPG GG R + DG +VLDD A AQAVV R R V P GRR+
Sbjct: 575 QPGGGGQLLRDRVPDGAVVLDDAAPAQAVVARGHGRRVPPHGRRR 709
Score = 43.2 bits (88), Expect(3) = 9e-025
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1 / -1
Query: 589 ASSPAGP*L*L*ESWMGPRPKYFLPATHGH 678
++ PAGP*L +SWMGPRP LP HGH
Sbjct: 556 SACPAGP*LKFHDSWMGPRPW*DLPG*HGH 467
Score = 42.3 bits (86), Expect(3) = 9e-025
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = +3 / -3
Query: 477 RRLGRLRRHPEPDGRLEGDDGVRRHQLRVAQQV 575
RRLG RRHPEP R E G H LRVAQ V
Sbjct: 662 RRLGPARRHPEPQRRPERGLGAVGHHLRVAQAV 564
>gb|CF760116.1|CF760116 DSAF1_55_F11.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_55_F11_A011 5', mRNA sequence
Length = 527
Score = 139 bits (299), Expect(2) = 1e-051
Identities = 53/81 (65%), Positives = 61/81 (75%)
Frame = -1 / +3
Query: 620 NYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPS 441
+YNY I +L+NP+LVASD +SF+TA+WFWMT Q PKPSCH V T QWTPS
Sbjct: 9 SYNYNYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWMTPQSPKPSCHAVMTGQWTPS 188
Query: 440 AADKAAGRLPGYGVITNIING 378
AD AAGRLPGYGV+TNIING
Sbjct: 189 GADTAAGRLPGYGVVTNIING 251
Score = 85.8 bits (181), Expect(2) = 1e-051
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1 / +3
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNS 249
I G+ECGKG + +VA+R FY YCD+LG+SYGDNLDC NQ+PFNS
Sbjct: 243 INGGLECGKGADSRVADRIGFYKRYCDLLGVSYGDNLDCANQKPFNS 383
Score = 71.6 bits (150), Expect(3) = 8e-024
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -3 / +2
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLDD A AQAVVPRR R VD +G RGE +G
Sbjct: 44 HRRRHPRQPGPGGVGPDRVVRDGGVVLDDAAVAQAVVPRRHDRPVDAVGS*HRRGEVAG 220
Score = 47.3 bits (97), Expect(3) = 8e-024
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3 / +2
Query: 339 PDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
PD LL LLR W QLRR LGL QPEALQQ
Sbjct: 293 PDRLLQALLRLAWCQLRR*LGLRQPEALQQ 382
Score = 30.9 bits (61), Expect(3) = 8e-024
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 632 QLSYNYNYGPAGE 594
Q+SYNYNYG AG+
Sbjct: 3 QISYNYNYGAAGQ 41
>gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_F08_A002 5', mRNA sequence
Length = 740
Score = 134 bits (288), Expect(3) = 2e-050
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -1 / +3
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VA++++E L+ + H+++ C A+GFYTY +FI AA F F TG +KRE+AAF
Sbjct: 237 VATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRKREVAAFF 416
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
Q HETTGGW APDG + WG CYKEE + YCD T
Sbjct: 417 AQISHETTGGWATAPDGQYAWGLCYKEEISPASSYCDAT 533
Score = 67.5 bits (141), Expect(3) = 3e-025
Identities = 40/84 (47%), Positives = 44/84 (52%)
Frame = +1 / -2
Query: 694 VMSQ*SAVAPFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRN 873
V SQ* SSL* P PSGA QPPVVS +C K AA+SR PV N
Sbjct: 532 VASQ*LLAGLISSL*HRPHAYCPSGAVAQPPVVS*EICAKKAATSRLRVLRSPVAANLGN 353
Query: 874 ASAAVMKASYV*KPRALQSGSLRC 945
AA MK + V*KP A Q+ S C
Sbjct: 352 VLAAWMKEA*V*KPLAGQAASSLC 281
Score = 65.7 bits (137), Expect(3) = 2e-050
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -1 / +3
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
QWPC GK Y GRGPIQLS+N+NYGPAG+
Sbjct: 540 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQ 626
Score = 44.1 bits (90), Expect(3) = 3e-025
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = +3 / -1
Query: 474 ARRLGRLRRHPEPDGRLEGDDGVRRHQLRVAQQV 575
ARRLG RRHPEP R E G H LRVAQ V
Sbjct: 740 ARRLGPARRHPEPQRRPERGLGAVGHHLRVAQAV 639
Score = 43.2 bits (88), Expect(3) = 3e-025
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1 / -2
Query: 589 ASSPAGP*L*L*ESWMGPRPKYFLPATHGH 678
++ PAGP*L +SWMGPRP LP HGH
Sbjct: 631 SACPAGP*LKFHDSWMGPRPW*DLPG*HGH 542
Score = 39.1 bits (79), Expect(3) = 2e-050
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3 / +2
Query: 564 QPGAGGVGRRHLLQDGHLVLDDGAAAQAVV 475
QPG GG R + DG +VLDD A AQAVV
Sbjct: 650 QPGGGGQLLRDRVPDGAVVLDDAAPAQAVV 739
>gb|CW470070.1|CW470070 fsbb001f223b16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f223b16, DNA
sequence
Length = 452
Score = 135 bits (290), Expect(2) = 3e-049
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = -1 / -1
Query: 584 IAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRLPGY 405
I +L+NP+LVA+DA +S +TA+WFWMT Q PKPSCHDV T QWTPSAAD AAGRLPGY
Sbjct: 437 IGAGILANPDLVAADATVSLETAVWFWMTPQSPKPSCHDVMTGQWTPSAADIAAGRLPGY 258
Query: 404 GVITNIING 378
GV+TNIING
Sbjct: 257 GVVTNIING 231
Score = 81.7 bits (172), Expect(2) = 3e-049
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1 / -1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNSA 246
I G+ECG G + +VA+R FY YCD+LG+SYGDNLDC NQ PFNS+
Sbjct: 239 INGGLECGHGADTRVADRIGFYKRYCDLLGVSYGDNLDCANQMPFNSS 96
>gb|BE366378.1|BE366378 PI1_32_H10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 454
Score = 129 bits (276), Expect(2) = 6e-047
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = -1 / +1
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ +YNY I +L+NP+LVASD +SF+TA+WFW+T Q PKPSCH V T Q
Sbjct: 13 IQISYNYKYGAAGQAIGAGILANPDLVASDPTVSFETAVWFWITPQSPKPSCHAVMTGQC 192
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
TPS AD AGRLPGYGV+TNIING
Sbjct: 193 TPSGADTPAGRLPGYGVVTNIING 264
Score = 80.3 bits (169), Expect(2) = 6e-047
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFN 252
I G+ECGKG + +V++R FY YCD+LG+ YGDNLDC NQ+PFN
Sbjct: 256 INGGLECGKGADSRVSDRIGFYKRYCDLLGVRYGDNLDCANQKPFN 393
Score = 65.2 bits (136), Expect(3) = 3e-024
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = -3 / +3
Query: 585 HRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAAAQAVVPRRGHRAVDPLGRRQGRGEASG 409
HR QPG GGVG +++DG +VLD+ A AQAVVPRR R V +G RGE +G
Sbjct: 57 HRRRHPRQPGPGGVGPDRVVRDGGVVLDNAAVAQAVVPRRHDRPVYAVGS*HPRGEVAG 233
Score = 45.1 bits (92), Expect(3) = 3e-024
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -3 / +3
Query: 339 PDLLLHQLLRHPWHQLRRQLGLLQPEALQQ 250
PD +L LLR W Q+RR LGL QPEALQQ
Sbjct: 306 PDRVLQALLRLAWCQIRR*LGLRQPEALQQ 395
Score = 40.9 bits (83), Expect(3) = 3e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 647 GRGPIQLSYNYNYGPAGE 594
GRGPIQ+SYNY YG AG+
Sbjct: 1 GRGPIQISYNYKYGAAGQ 54
>gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232237, DNA
sequence
Length = 662
Score = 129 bits (276), Expect(5) = 3e-044
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = -1 / +2
Query: 575 DLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRLPGYGVI 396
+L+ NP+LV+SD V++FKTAIWFWMT Q PKPSCH V T WTPSA D+AAGRLPGYGV
Sbjct: 275 NLVGNPDLVSSDPVVAFKTAIWFWMTPQSPKPSCHAVMTGSWTPSADDRAAGRLPGYGVT 454
Query: 395 TNIING 378
TNIING
Sbjct: 455 TNIING 472
Score = 44.1 bits (90), Expect(5) = 3e-044
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / +2
Query: 785 GGWPNAPDGAFTWGYCYKEENGAT 714
GGWP AP G F WGYC +E T
Sbjct: 5 GGWPTAPGGQFAWGYCRVKEQNPT 76
Score = 38.6 bits (78), Expect(5) = 3e-044
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1 / +2
Query: 341 NRTFFYTSYCDILGISYGDNLDCYNQRPF 255
+R +Y Y D+L + YGDN+ C +Q+P+
Sbjct: 515 DRVGYYKRYSDMLRVRYGDNIACKDQKPY 601
Score = 24.9 bits (48), Expect(5) = 3e-044
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 653 YFGRGPIQLS 624
Y+GRGPIQL+
Sbjct: 86 YYGRGPIQLT 115
Score = 21.7 bits (41), Expect(5) = 3e-044
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1 / +2
Query: 389 IINGIECGKGYNEKVA 342
I G+ECGKG + A
Sbjct: 464 INGGMECGKGQSTDAA 511
>gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_D07_A002 5', mRNA sequence
Length = 683
Score = 134 bits (288), Expect(2) = 4e-044
Identities = 49/99 (49%), Positives = 64/99 (64%)
Frame = -1 / +3
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VA++++E L+ + H+++ C A+GFYTY +FI AA F F TG +KRE+AAF
Sbjct: 264 VATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRKREVAAFF 443
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
Q HETTGGW APDG + WG CYKEE + YCD T
Sbjct: 444 AQISHETTGGWATAPDGQYAWGLCYKEEISPASSYCDAT 560
Score = 65.7 bits (137), Expect(2) = 4e-044
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -1 / +3
Query: 680 QWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
QWPC GK Y GRGPIQLS+N+NYGPAG+
Sbjct: 567 QWPCYPGKSYHGRGPIQLSWNFNYGPAGQ 653
>gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c05, DNA
sequence
Length = 746
Score = 101 bits (215), Expect(3) = 2e-043
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = -1 / -1
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ ++N+ + D L NPE+VA+ + +F+TA+WFWMT + PKPSCH+V ++
Sbjct: 593 IQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTPRRPKPSCHEVMVGEY 414
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
P+AAD AA R G+G++TNI+NG
Sbjct: 413 RPTAADAAANRTAGFGLVTNIVNG 342
Score = 63.4 bits (132), Expect(3) = 2e-043
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 794 ETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
ETTGGW APDG + WG CYKEE + YCD T
Sbjct: 746 ETTGGWATAPDGQYAWGLCYKEEISPASSYCDAT 645
Score = 51.5 bits (106), Expect(3) = 2e-043
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / -1
Query: 380 GIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPF 255
G+EC + + +V NR FY YC I + G NLDC +Q+P+
Sbjct: 341 GLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAHQQPY 216
>gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 708
Score = 107 bits (229), Expect(3) = 2e-042
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = -1 / +2
Query: 614 NYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAA 435
NY I DLL+NP+LVA+D V+SFKTA+WFWMTA+ KPSCH V T QWTP+AA
Sbjct: 101 NYNYGPAGRAIGVDLLNNPDLVATDPVVSFKTALWFWMTARDNKPSCHAVITGQWTPTAA 280
Query: 434 DKAAGR 417
D+AAGR
Sbjct: 281 DRAAGR 298
Score = 72.5 bits (152), Expect(3) = 2e-042
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -1 / +2
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNSA 246
I GIECG G + +V +R FY YCD+ I YG NLDC QRPFNSA
Sbjct: 332 INGGIECGHGADPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSA 475
Score = 32.7 bits (65), Expect(3) = 2e-042
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 413 PGYGVITNIING 378
PGYGVITNIING
Sbjct: 305 PGYGVITNIING 340
>gb|CW206618.1|CW206618 104_635_11187687_148_36965_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187687, DNA
sequence
Length = 587
Score = 168 bits (361), Expect(2) = 3e-041
Identities = 65/93 (69%), Positives = 73/93 (78%)
Frame = -1 / +2
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VASII+E LF +ML HRN+ C A GFYTY AFI AA+AF GFGTTG + QKRELAAFL
Sbjct: 260 VASIISESLFNQMLLHRNDAACPANGFYTYSAFIAAANAFPGFGTTGGADTQKRELAAFL 439
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYKEENGATA 711
QT HETTGGW APDGA+ WGYC+KEE GA +
Sbjct: 440 AQTSHETTGGWATAPDGAYAWGYCFKEEQGAAS 538
Score = 120 bits (256), Expect = 5e-026
Identities = 60/91 (65%), Positives = 63/91 (69%)
Frame = +1 / -3
Query: 718 APFSSL*Q*PQVKAPSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVMKA 897
AP SSL Q*PQ APSGA PPVVSC V +NAASSRFW S PVVPKP NA AA MKA
Sbjct: 531 APCSSLKQ*PQA*APSGAVAHPPVVSCEVWARNAASSRFWVSAPPVVPKPGNALAAAMKA 352
Query: 898 SYV*KPRALQSGSLRCFSILSKRSSVIMDAT 990
V*KP A + SLR SI KR S +MDAT
Sbjct: 351 E*V*KPLAGHAASLRWRSIWLKRDSEMMDAT 259
Score = 22.6 bits (43), Expect(2) = 3e-041
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -1 / +2
Query: 731 EENGATADYCDMTGEYAQWPCVAG 660
+E A D QWPC AG
Sbjct: 515 KEEQGAASGPDYCEPSTQWPCAAG 586
>gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 655
Score = 129 bits (276), Expect(3) = 1e-040
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = -1 / +3
Query: 575 DLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRLPGYGVI 396
+L+ NP+LV+SD V++FKTAIWFWMT Q PKPSCH V T WTPSA D+AAGRLPGYGV
Sbjct: 111 NLVGNPDLVSSDPVVAFKTAIWFWMTPQSPKPSCHAVMTGSWTPSADDRAAGRLPGYGVT 290
Query: 395 TNIING 378
TNIING
Sbjct: 291 TNIING 308
Score = 39.1 bits (79), Expect(3) = 1e-040
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 653 YFGRGPIQLSYNYNYGPAGE 594
Y+GRGPIQL++ YNY AG+
Sbjct: 39 YYGRGPIQLTHEYNYRQAGQ 98
Score = 38.6 bits (78), Expect(3) = 1e-040
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1 / +3
Query: 341 NRTFFYTSYCDILGISYGDNLDCYNQRPF 255
+R +Y Y D+L + YGDN+ C +Q+P+
Sbjct: 351 DRVGYYKRYSDMLRVRYGDNIACKDQKPY 437
>gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_56_F03_A002 3', mRNA sequence
Length = 599
Score = 101 bits (215), Expect(3) = 2e-038
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = -1 / +3
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ ++N+ + D L NPE+VA+ + +F+TA+WFWMT + PKPSCH+V ++
Sbjct: 132 IQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTPRRPKPSCHEVMVGEY 311
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
P+AAD AA R G+G++TNI+NG
Sbjct: 312 RPTAADAAANRTAGFGLVTNIVNG 383
Score = 51.5 bits (106), Expect(3) = 2e-038
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / +3
Query: 380 GIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPF 255
G+EC + + +V NR FY YC I + G NLDC +Q+P+
Sbjct: 384 GLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAHQQPY 509
Score = 46.4 bits (95), Expect(3) = 2e-038
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / +3
Query: 770 APDGAFTWGYCYKEENGATADYCDMT 693
APDG + WG CYKEE + YCD T
Sbjct: 3 APDGQYAWGLCYKEEISPASSYCDAT 80
>gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_F08_A002 3', mRNA sequence
Length = 632
Score = 95.5 bits (202), Expect(3) = 4e-036
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = -1 / +3
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ ++N+ + D L NPE+VA+ + +F+TA+ FWMT + PKPSCH+V ++
Sbjct: 129 IQLSWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALCFWMTPRRPKPSCHEVMVGEY 308
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
P+AAD AA R G+G++TNI+NG
Sbjct: 309 RPTAADAAANRTAGFGLVTNIVNG 380
Score = 51.5 bits (106), Expect(3) = 4e-036
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / +3
Query: 380 GIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPF 255
G+EC + + +V NR FY YC I + G NLDC +Q+P+
Sbjct: 381 GLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAHQQPY 506
Score = 44.6 bits (91), Expect(3) = 4e-036
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 767 PDGAFTWGYCYKEENGATADYCDMT 693
PDG + WG CYKEE + YCD T
Sbjct: 3 PDGQYAWGLCYKEEISPVSSYCDAT 77
>gb|BE358815.1|BE358815 DG1_32_F07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 117 bits (250), Expect(3) = 2e-034
Identities = 44/66 (66%), Positives = 48/66 (72%)
Frame = -1 / +3
Query: 911 FYTYDAFITAADAFRGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYK 732
FYTYDAFI AA F GFGTTG + ++RELAAF GQT HETTGGWP AP G F WGYC
Sbjct: 198 FYTYDAFIEAASKFPGFGTTGDDQTRRRELAAFFGQTSHETTGGWPTAPGGQFAWGYCRV 377
Query: 731 EENGAT 714
+E T
Sbjct: 378 KEQNPT 395
Score = 39.1 bits (79), Expect(3) = 2e-034
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 653 YFGRGPIQLSYNYNYGPAGE 594
Y+GRGPIQL++ YNY AG+
Sbjct: 405 YYGRGPIQLTHEYNYRQAGQ 464
Score = 29.5 bits (58), Expect(3) = 2e-034
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 989 VASIITEDLFERMLKHRNEPDCK 921
V SIIT +F+ ML HR + C+
Sbjct: 123 VWSIITRPMFQSMLSHRGDSGCQ 191
>gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230799, DNA
sequence
Length = 583
Score = 105 bits (223), Expect(5) = 2e-034
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = -1 / -2
Query: 629 LSYNYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQW 450
+ ++N+ + D L NPE+VA D ++FKTA+WFWMT + PKPSCHDV ++
Sbjct: 477 IQLSWNFNYGPAGQALGFDGLGNPEVVAGDPEVAFKTALWFWMTPRSPKPSCHDVMVGRY 298
Query: 449 TPSAADKAAGRLPGYGVITNIING 378
P+ AD AA R G+G+ TNIING
Sbjct: 297 RPTDADVAANRTAGFGLTTNIING 226
Score = 34.5 bits (69), Expect(5) = 2e-034
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1 / -2
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILG 300
I GIECGK +V +R F+ YC++LG
Sbjct: 234 INGGIECGKTGVPQVDDRIGFFRRYCELLG 145
Score = 29.0 bits (57), Expect(5) = 2e-034
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 302 GISYGDNLDCYNQRPFNS 249
G+ G NLDC Q+P++S
Sbjct: 144 GVDVGPNLDCTQQQPYSS 91
Score = 28.6 bits (56), Expect(5) = 2e-034
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / -2
Query: 746 GYCYKEENGATADYCDMT 693
G C+KEE + YCD+T
Sbjct: 582 GLCFKEEISPASKYCDIT 529
Score = 23.1 bits (44), Expect(5) = 2e-034
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 678 VAVRRRQEVLRPRAHP 631
VAVRRR+ V P HP
Sbjct: 520 VAVRRRRVVPWPGTHP 473
>gb|CW307371.1|CW307371 104_795_11468105_116_35728_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468105, DNA
sequence
Length = 642
Score = 81.7 bits (172), Expect(2) = 8e-033
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1 / -2
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPFNSA 246
I G+ECG G + +VA+R FY YCD+LG+SYGDNLDC NQ PFNS+
Sbjct: 545 INGGLECGHGADTRVADRIGFYKRYCDLLGVSYGDNLDCANQMPFNSS 402
Score = 80.8 bits (170), Expect(2) = 8e-033
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -1 / -2
Query: 482 PSCHDVATEQWTPSAADKAAGRLPGYGVITNIING 378
PSCHDV T QWTPSAAD AAGRLPGYGV+TNIING
Sbjct: 641 PSCHDVMTGQWTPSAADIAAGRLPGYGVVTNIING 537
>gb|BE594394.1|BE594394 PI1_32_H10.b2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 138 bits (296), Expect = 1e-031
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = -1 / +2
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VASII+E LF +ML HRN+ C A GFYTY AFI AA+AF GFGTTG + QKRELAAFL
Sbjct: 341 VASIISESLFNQMLLHRNDAACPANGFYTYSAFIAAANAFPGFGTTGGADTQKRELAAFL 520
Query: 809 GQTGHETTGGWPNAPDGA 756
QT HETTGGW APDGA
Sbjct: 521 AQTSHETTGGWATAPDGA 574
Score = 105 bits (225), Expect = 9e-022
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +1 / -2
Query: 757 APSGAFGQPPVVSCPVCPKNAASSRFWTSVLPVVPKPRNASAAVMKASYV*KPRALQSGS 936
APSGA PPVVSC V +NAASSRFW S PVVPKP NA AA MKA V*KP A + S
Sbjct: 573 APSGAVAHPPVVSCEVWARNAASSRFWVSAPPVVPKPGNALAAAMKAE*V*KPLAGHAAS 394
Query: 937 LRCFSILSKRSSVIMDAT 990
LR SI KR S +MDAT
Sbjct: 393 LRWRSIWLKRDSEMMDAT 340
>gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 3', mRNA sequence
Length = 714
Score = 73.9 bits (155), Expect(5) = 2e-031
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +3
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 312 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 404
Score = 36.3 bits (73), Expect(5) = 2e-031
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +2
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 404 EHRLRRAREPGRRGAGRRDRVQGGALVLDEQRA 502
Score = 36.3 bits (73), Expect(5) = 2e-031
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +3
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 159 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 254
Score = 31.8 bits (63), Expect(5) = 2e-031
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1 / +3
Query: 398 ITNIINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDC 273
I I +EC ++ R +Y YC G+ G NL C
Sbjct: 534 IRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC 659
Score = 31.3 bits (62), Expect(5) = 2e-031
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +3
Query: 977 ITEDLFERMLKHRNEPDCKARGFYTYDAFITAADA 873
+ D F +K++ C+ FY+ DAF++AA A
Sbjct: 60 VVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAASA 164
>gb|CF480059.1|CF480059 POL1_63_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_63_B05_A002 5', mRNA sequence
Length = 590
Score = 116 bits (249), Expect(2) = 2e-030
Identities = 42/86 (48%), Positives = 56/86 (65%)
Frame = -1 / +1
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VA++++E L+ + H+++ C A+GFYTY +FI AA F F TG +KRE+AA
Sbjct: 220 VATLVSEQLYNSLFLHKDDAACPAKGFYTYASFIQAARTFPKFAATGDLSTRKREVAALF 399
Query: 809 GQTGHETTGGWPNAPDGAFTWGYCYK 732
Q HETTGGW APDG + WG CYK
Sbjct: 400 AQISHETTGGWATAPDGQYAWGLCYK 477
Score = 37.3 bits (75), Expect(2) = 2e-030
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1 / +2
Query: 680 QWPCVAGKKYFGRGPI 633
QWPC GK Y GRGPI
Sbjct: 524 QWPCYPGKSYHGRGPI 571
>gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805558, DNA
sequence
Length = 680
Score = 100 bits (214), Expect(2) = 8e-030
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = -1 / +3
Query: 620 NYNYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPS 441
++N+ + D L NPE+VA+ + +F+TA+WFWMT + PKPSCH+V ++ P+
Sbjct: 6 SWNFNYGPAGQALGFDGLRNPEVVANCSETAFRTALWFWMTPRRPKPSCHEVMVGEYRPT 185
Query: 440 AADKAAGRLPGYGVITNIING 378
AAD AA R G+G++TNI+NG
Sbjct: 186 AADAAANRTAGFGLVTNIVNG 248
Score = 51.5 bits (106), Expect(2) = 8e-030
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / +3
Query: 380 GIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPF 255
G+EC + + +V NR FY YC I + G NLDC +Q+P+
Sbjct: 249 GLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAHQQPY 374
>gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_D07_A002 3', mRNA sequence
Length = 635
Score = 99.6 bits (211), Expect(2) = 2e-029
Identities = 36/66 (54%), Positives = 51/66 (77%)
Frame = -1 / +1
Query: 575 DLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRLPGYGVI 396
D L NPE+VA+ + +F+TA+WFWMT + PKPSCH+V ++ P+AAD AA R G+G++
Sbjct: 31 DGLRNPEVVANCSETAFRTALWFWMTPRRPKPSCHEVMVGEYRPTAADAAANRTAGFGLV 210
Query: 395 TNIING 378
TNI+NG
Sbjct: 211 TNIVNG 228
Score = 51.5 bits (106), Expect(2) = 2e-029
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / +1
Query: 380 GIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDCYNQRPF 255
G+EC + + +V NR FY YC I + G NLDC +Q+P+
Sbjct: 229 GLECNRTDDARVNNRIGFYQRYCQIFNVDAGANLDCAHQQPY 354
>gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 5', mRNA sequence
Length = 780
Score = 73.9 bits (155), Expect(4) = 4e-027
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +2
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 554 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 646
Score = 36.8 bits (74), Expect(4) = 4e-027
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 646 EHRLRQAREPGRRGAGRRDRVQGGALVLDEQRA 744
Score = 36.3 bits (73), Expect(4) = 4e-027
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +2
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 401 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 496
Score = 31.3 bits (62), Expect(4) = 4e-027
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +2
Query: 977 ITEDLFERMLKHRNEPDCKARGFYTYDAFITAADA 873
+ D F +K++ C+ FY+ DAF++AA A
Sbjct: 302 VVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAASA 406
>gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 737
Score = 73.9 bits (155), Expect(4) = 4e-027
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +1
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 184 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 276
Score = 36.3 bits (73), Expect(4) = 4e-027
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 276 EHRLRRAREPGRRGAGRRDRVQGGALVLDEQRA 374
Score = 36.3 bits (73), Expect(4) = 4e-027
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +1
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 31 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 126
Score = 31.8 bits (63), Expect(4) = 4e-027
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1 / +1
Query: 398 ITNIINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDC 273
I I +EC ++ R +Y YC G+ G NL C
Sbjct: 406 IRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC 531
>gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 3', mRNA sequence
Length = 722
Score = 73.9 bits (155), Expect(4) = 4e-027
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +3
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 162 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 254
Score = 36.3 bits (73), Expect(4) = 4e-027
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +2
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 254 EHRLRRAREPGRRGAGRRDRVQGGALVLDEQRA 352
Score = 36.3 bits (73), Expect(4) = 4e-027
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +3
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 9 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 104
Score = 31.8 bits (63), Expect(4) = 4e-027
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1 / +3
Query: 398 ITNIINGIECGKGYNEKVANRTFFYTSYCDILGISYGDNLDC 273
I I +EC ++ R +Y YC G+ G NL C
Sbjct: 384 IRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC 509
>gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 5', mRNA sequence
Length = 773
Score = 73.9 bits (155), Expect(4) = 5e-027
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +1
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 547 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 639
Score = 36.3 bits (73), Expect(4) = 5e-027
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 639 EHRLRRAREPGRRGAGRRDRVQGGALVLDEQRA 737
Score = 36.3 bits (73), Expect(4) = 5e-027
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +1
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 394 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 489
Score = 31.3 bits (62), Expect(4) = 5e-027
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +1
Query: 977 ITEDLFERMLKHRNEPDCKARGFYTYDAFITAADA 873
+ D F +K++ C+ FY+ DAF++AA A
Sbjct: 295 VVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAASA 399
>gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_C09_A002 5', mRNA sequence
Length = 742
Score = 73.9 bits (155), Expect(4) = 5e-027
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +1
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 547 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 639
Score = 36.3 bits (73), Expect(4) = 5e-027
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 639 EHRLRRAREPGRRGAGRRDRVQGGALVLDEQRA 737
Score = 36.3 bits (73), Expect(4) = 5e-027
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +1
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 394 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 489
Score = 31.3 bits (62), Expect(4) = 5e-027
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +1
Query: 977 ITEDLFERMLKHRNEPDCKARGFYTYDAFITAADA 873
+ D F +K++ C+ FY+ DAF++AA A
Sbjct: 295 VVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAASA 399
>gb|CW022215.1|CW022215 104_161_10431706_5_30007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431706, DNA
sequence
Length = 609
Score = 79.0 bits (166), Expect(4) = 7e-027
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -1 / -3
Query: 911 FYTYDAFITAADAFRGFGTTGSTEVQKRELAAFLGQTGHETTG 783
FYTYDAFI AA F GFGTTG + ++RELAAF GQT HETTG
Sbjct: 448 FYTYDAFIEAASKFPGFGTTGDDQTRRRELAAFFGQTSHETTG 320
Score = 44.1 bits (90), Expect(4) = 7e-027
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 785 GGWPNAPDGAFTWGYCYKEENGAT 714
GGWP AP G F WGYC +E T
Sbjct: 200 GGWPTAPGGQFAWGYCRVKEQNPT 129
Score = 29.5 bits (58), Expect(4) = 7e-027
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 989 VASIITEDLFERMLKHRNEPDCK 921
V SIIT +F+ ML HR + C+
Sbjct: 523 VWSIITRPMFQSMLSHRGDSGCQ 455
Score = 24.9 bits (48), Expect(4) = 7e-027
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 653 YFGRGPIQLS 624
Y+GRGPIQL+
Sbjct: 119 YYGRGPIQLT 90
>gb|BE357050.1|BE357050 DG1_146_F01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 63.8 bits (133), Expect(3) = 9e-027
Identities = 26/59 (44%), Positives = 32/59 (54%)
Frame = -1 / +2
Query: 869 RGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
+GF TTG ++Q EL AFLG G +T+ G+ A G WG CY E YCD T
Sbjct: 251 QGFCTTGGKQMQMMELCAFLGHVGAKTSCGYGVATGGPTAWGLCYNHEMSPDQTYCDKT 427
Score = 58.3 bits (121), Expect(3) = 9e-027
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = -1 / +2
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPCV G +Y+GRG I + +NYNYG AG+
Sbjct: 428 YTQWPCVEGAEYYGRGAIPVYWNYNYGAAGD 520
Score = 37.7 bits (76), Expect(3) = 9e-027
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 962 FERMLKHRNEPDCKARGFYTYDAFITAADAFRGFG 858
FE + RN P A GF+ Y AFITAA F G
Sbjct: 152 FENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQG 256
>gb|CW282926.1|CW282926 104_759_11408975_148_35475_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408975, DNA
sequence
Length = 426
Score = 121 bits (259), Expect = 2e-026
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = -1 / +1
Query: 989 VASIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFL 810
VASI+TE L+ M KH+++ C A GFY Y +F+ AA+ F FG G +KRE+AAFL
Sbjct: 175 VASIVTEKLYSDMFKHKDDTACPAHGFYNYTSFLRAAERFPAFGGDGDAATRKREVAAFL 354
Query: 809 GQTGHETTGGWPNAPDGAFTWGYC 738
Q HETTGGW APDG + WG C
Sbjct: 355 AQISHETTGGWATAPDGPYAWGLC 426
>gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231683, DNA
sequence
Length = 700
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 21/30 (70%), Positives = 28/30 (93%)
Frame = -1 / +3
Query: 683 AQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
+QWPC GKKY+GRGP+Q+S+N+NYGPAG+
Sbjct: 510 SQWPCAPGKKYYGRGPLQISWNFNYGPAGQ 599
Score = 53.8 bits (111), Expect(3) = 2e-026
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1 / +2
Query: 983 SIITEDLFERMLKHRNEPDCKARGFYTYDAFITAADAFRGFGTTGSTEVQKRELAAFLGQ 804
S + + F +K + C+ + FYT AF++AADAF F G+ KRE+AAF
Sbjct: 176 SSVVTEAFFDGIKSQAGNGCEGKNFYTRSAFVSAADAFPAFAHGGTEAEGKREIAAFFAH 355
Query: 803 TGHET 789
+ET
Sbjct: 356 VTYET 370
Score = 40.0 bits (81), Expect(3) = 2e-026
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 560 PELVASDAVISFKTAIWFWMT 498
P VA D V+SFKTA+W WMT
Sbjct: 626 PGQVAQDPVVSFKTALWLWMT 688
>gb|CX618297.1|CX618297 GABR1_38_F09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_38_F09_A002 5', mRNA sequence
Length = 782
Score = 60.2 bits (125), Expect(3) = 4e-026
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -1 / +2
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
YAQWPCV G +Y+GRG I + +NYNYG AG+
Sbjct: 611 YAQWPCVEGAEYYGRGAIPVYWNYNYGAAGD 703
Score = 59.7 bits (124), Expect(3) = 4e-026
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = -1 / +2
Query: 869 RGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
+GF TT ++Q EL AFLG G +T+ G+ A G WG CY E YCD T
Sbjct: 434 QGFCTTDGKQMQMMELCAFLGHVGAKTSCGYGVATGGPTAWGLCYNHEVSPDQAYCDKT 610
Score = 37.7 bits (76), Expect(3) = 4e-026
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 962 FERMLKHRNEPDCKARGFYTYDAFITAADAFRGFG 858
FE + RN P A GF+ Y AFITAA F G
Sbjct: 335 FENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQG 439
>gb|CX607585.1|CX607585 ANR1_29_C07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C07_A002 5', mRNA sequence
Length = 764
Score = 63.8 bits (133), Expect(3) = 5e-026
Identities = 26/59 (44%), Positives = 32/59 (54%)
Frame = -1 / +2
Query: 869 RGFGTTGSTEVQKRELAAFLGQTGHETTGGWPNAPDGAFTWGYCYKEENGATADYCDMT 693
+GF TTG ++Q EL AFLG G +T+ G+ A G WG CY E YCD T
Sbjct: 452 QGFCTTGGKQMQMMELCAFLGHVGPKTSCGYGVATGGPTAWGLCYNHEMSPDQTYCDKT 628
Score = 55.6 bits (115), Expect(3) = 5e-026
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -1 / +2
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPCV G +Y+GRG I + +NYNYG A +
Sbjct: 629 YTQWPCVEGAEYYGRGAIPVYWNYNYGAASD 721
Score = 37.7 bits (76), Expect(3) = 5e-026
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 962 FERMLKHRNEPDCKARGFYTYDAFITAADAFRGFG 858
FE + RN P A GF+ Y AFITAA F G
Sbjct: 353 FENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQG 457
>gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_A10_A002 5', mRNA sequence
Length = 733
Score = 73.9 bits (155), Expect(4) = 1e-025
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +3
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 537 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 629
Score = 35.9 bits (72), Expect(4) = 1e-025
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDD 499
+HR A +PG G GRR +Q G LVLD+
Sbjct: 629 EHRLRRAREPGRRGAGRRDRVQGGALVLDE 718
Score = 32.2 bits (64), Expect(4) = 1e-025
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1 / +3
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + RE+AAF HET
Sbjct: 384 SASAYSGFAQGGSEDDG*REIAAFFAHATHET 479
Score = 31.3 bits (62), Expect(4) = 1e-025
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +3
Query: 977 ITEDLFERMLKHRNEPDCKARGFYTYDAFITAADA 873
+ D F +K++ C+ FY+ DAF++AA A
Sbjct: 285 VVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAASA 389
>gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142974, DNA
sequence
Length = 708
Score = 73.9 bits (155), Expect(4) = 1e-025
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1 / +2
Query: 686 YAQWPCVAGKKYFGRGPIQLSYNYNYGPAGE 594
Y QWPC AG+KY+GRGP+Q+S+NYNYGPAG+
Sbjct: 470 YTQWPCAAGQKYYGRGPLQISWNYNYGPAGQ 562
Score = 36.3 bits (73), Expect(4) = 1e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 588 DHRPGPAEQPGAGGVGRRHLLQDGHLVLDDGAA 490
+HR A +PG G GRR +Q G LVLD+ A
Sbjct: 562 EHRLRRAREPGRRGAGRRDRVQGGALVLDEQRA 660
Score = 36.3 bits (73), Expect(4) = 1e-025
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1 / +3
Query: 884 AADAFRGFGTTGSTEVQKRELAAFLGQTGHET 789
+A A+ GF GS + KRE+AAF HET
Sbjct: 216 SASAYSGFAQGGSEDDGKREIAAFFAHATHET 311
Score = 31.3 bits (62), Expect(4) = 1e-025
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / +3
Query: 977 ITEDLFERMLKHRNEPDCKARGFYTYDAFITAADA 873
+ D F +K++ C+ FY+ DAF++AA A
Sbjct: 117 VVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAASA 221
>gb|BE598196.1|BE598196 PI1_66_H02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 359
Score = 91.3 bits (193), Expect(2) = 1e-025
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = -1 / +3
Query: 614 NYGPAGEDATIAQDLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTP 444
NY I DLL+NP+LVA+D V+SFKTA+WFWMTA+ KPSCH V T QWTP
Sbjct: 189 NYNYGPAGRAIGVDLLNNPDLVATDPVVSFKTALWFWMTARDNKPSCHAVITGQWTP 359
Score = 46.9 bits (96), Expect(2) = 1e-025
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / +1
Query: 680 QWPCVAGKKYFGRGPIQLS 624
+WPC GKKYFGRGPIQ+S
Sbjct: 31 EWPCAPGKKYFGRGPIQIS 87
>gb|CN125314.1|CN125314 RHOH1_10_G12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_10_G12_A002 3', mRNA sequence
Length = 485
Score = 92.3 bits (195), Expect(3) = 1e-025
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = -1 / +1
Query: 575 DLLSNPELVASDAVISFKTAIWFWMTAQPPKPSCHDVATEQWTPSAADKAAGRLPGYGVI 396
D L NPE+VA D + KTA+WFWMT + PKPS HDV ++ P+ AD AA R G+G+
Sbjct: 22 DGLGNPEVVAGDPGVE*KTALWFWMTRRSPKPSRHDVMVGRYRPTDADVAANRTAGFGLT 201
Query: 395 TNIING 378
TNIING
Sbjct: 202 TNIING 219
Score = 34.5 bits (69), Expect(3) = 1e-025
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 389 IINGIECGKGYNEKVANRTFFYTSYCDILG 300
I GIECGK +V +R F+ YC++LG
Sbjct: 211 INGGIECGKTGVPQVDDRIGFFRRYCELLG 300
Score = 29.0 bits (57), Expect(3) = 1e-025
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 302 GISYGDNLDCYNQRPFNS 249
G+ G NLDC Q+P++S
Sbjct: 301 GVDVGPNLDCTQQQPYSS 354
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 853,424,088
Number of Sequences: 832831
Number of extensions: 11163766
Number of successful extensions: 99345
Number of sequences better than 1.0e-020: 92
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 34450408492
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)