TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184927.2.1
(1157 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AX512962.1| Sequence 7 from Patent WO02063021 289 e-131
gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle... 305 2e-089
gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle... 305 2e-089
gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle... 300 1e-082
gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle ... 196 5e-074
gb|BI211709.1|BI211709 IP1_60_H10.g1_A002 Immature pannicle... 270 2e-071
gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle ... 154 6e-065
gb|CW044897.1|CW044897 104_281_10509231_115_30234 Sorghum m... 150 1e-060
gb|BI141675.1|BI141675 IP1_55_E06.b1_A002 Immature pannicle... 196 1e-056
gb|CW486984.1|CW486984 fsbb001f252j04f0 Sorghum methylation... 129 4e-053
gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves... 122 2e-050
gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylas... 91 4e-047
gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adap... 114 3e-046
gb|CL154458.1|CL154458 104_339_10781423_114_31371_287 Sorgh... 104 3e-046
gb|CW498402.1|CW498402 fsbb001f291j19k0 Sorghum methylation... 114 2e-043
gb|CW044896.1|CW044896 104_281_10509231_114_30238 Sorghum m... 127 2e-039
gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bi... 82 2e-038
gb|BI351507.1|BI351507 IP1_72_F10.g1_A002 Immature pannicle... 160 5e-038
gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum b... 62 2e-037
gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/c... 122 3e-037
gb|CW446802.1|CW446802 fsbb001f179k03k0 Sorghum methylation... 104 2e-036
gb|CW055082.1|CW055082 104_296_10516884_114_30174 Sorghum m... 104 2e-036
gb|CW501374.1|CW501374 fsbb001f297c11k0 Sorghum methylation... 114 3e-035
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 101 6e-033
gb|CD234981.1|CD234981 SS1_19_A07.g1_A012 Salt-stressed see... 127 2e-032
gb|CW464926.1|CW464926 fsbb001f215g22k0 Sorghum methylation... 91 3e-032
gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infecte... 122 3e-032
gb|CW344753.1|CW344753 104_847_11488123_116_36201_072 Sorgh... 128 5e-032
gb|CW307337.1|CW307337 104_795_11468086_148_36060_089 Sorgh... 128 5e-032
gb|CW446801.1|CW446801 fsbb001f179k03f0 Sorghum methylation... 123 6e-032
gb|BZ331520.1|BZ331520 hw10a10.g1 WGS-SbicolorF (JM107 adap... 123 6e-032
gb|CW146117.1|CW146117 104_538_11138820_116_34979_034 Sorgh... 123 6e-032
gb|CW072227.1|CW072227 104_325_10592141_114_30537 Sorghum m... 123 6e-032
gb|CL160198.1|CL160198 104_350_10804807_114_31822_247 Sorgh... 123 6e-032
gb|CW128866.1|CW128866 104_510_11114251_116_34758_070 Sorgh... 123 6e-032
gb|CW464925.1|CW464925 fsbb001f215g22f0 Sorghum methylation... 122 8e-032
gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves... 114 3e-031
gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated ... 66 3e-031
gb|CW477732.1|CW477732 fsbb001f235d13k0 Sorghum methylation... 128 1e-030
gb|CL160199.1|CL160199 104_350_10804807_116_31823_247 Sorgh... 89 1e-030
gb|BI245710.1|BI245710 IP1_63_C04.b1_A002 Immature pannicle... 117 2e-029
gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sor... 100 4e-029
gb|CW486985.1|CW486985 fsbb001f252j04k0 Sorghum methylation... 123 4e-029
gb|CW307336.1|CW307336 104_795_11468086_116_36059_089 Sorgh... 128 2e-028
gb|CW307965.1|CW307965 104_796_11468420_116_35731_076 Sorgh... 128 2e-028
gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves... 114 8e-028
gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkali... 122 8e-027
gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-tr... 114 1e-026
gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stres... 62 1e-026
gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sor... 122 1e-026
gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infecte... 97 2e-026
gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkal... 62 3e-026
gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stres... 62 3e-026
gb|CW410405.1|CW410405 fsbb001f105c06k0 Sorghum methylation... 76 5e-026
gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1... 59 9e-026
gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots S... 58 2e-025
gb|CD428251.1|CD428251 ETH1_28_F05.g1_A002 Ethylene-treated... 118 2e-025
gb|CN143230.1|CN143230 WOUND1_14_H07.g1_A002 Wounded leaves... 118 2e-025
gb|CX622540.1|CX622540 GABR1_64_C05.g2_A002 GA- or brassino... 118 2e-025
gb|BG157972.1|BG157972 OV1_15_D02.b1_A002 Ovary 1 (OV1) Sor... 116 6e-025
gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed... 77 7e-025
gb|CD227332.1|CD227332 CCC1_50_B06.g1_A007 Callus culture/c... 90 1e-024
gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorgh... 86 2e-024
gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorgh... 86 2e-024
gb|CB926819.1|CB926819 ABA1_10_G05.g1_A012 Abscisic acid-tr... 114 2e-024
gb|CN138728.1|CN138728 OX1_13_C08.g1_A002 Oxidatively-stres... 57 6e-024
gb|CW137978.1|CW137978 104_525_11119961_116_34878_071 Sorgh... 69 6e-024
gb|CD228254.1|CD228254 CCC1_6_B12.g1_A007 Callus culture/ce... 112 8e-024
gb|CD429768.1|CD429768 ETH1_15_C09.g1_A002 Ethylene-treated... 56 1e-023
gb|CD428297.1|CD428297 ETH1_28_F02.g1_A002 Ethylene-treated... 56 1e-023
gb|AW565210.1|AW565210 LG1_328_G10.b1_A002 Light Grown 1 (L... 56 1e-023
gb|BE360233.1|BE360233 DG1_62_H12.b1_A002 Dark Grown 1 (DG1... 56 1e-023
gb|CW421567.1|CW421567 fsbb001f130h05k0 Sorghum methylation... 73 1e-023
gb|CB924587.1|CB924587 ABA1_21_E12.g1_A012 Abscisic acid-tr... 56 2e-023
gb|CW458492.1|CW458492 fsbb001f204m20f0 Sorghum methylation... 69 2e-023
gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-tr... 95 1e-022
gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-defic... 65 2e-022
gb|U87453.1|SBU87453 Sorghum bicolor dihydroflavonol-4-redu... 73 2e-022
gb|CD226588.1|CD226588 CCC1_46_C01.g1_A007 Callus culture/c... 55 3e-022
gb|CD211972.1|CD211972 HS1_67_C09.g1_A012 Heat-shocked seed... 55 3e-022
gb|BE592843.1|BE592843 WS1_91_B04.b1_A002 Water-stressed 1 ... 81 3e-022
gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stress... 61 4e-022
gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1... 68 4e-022
gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seed... 68 4e-022
gb|CX618426.1|CX618426 GABR1_39_C04.g1_A002 GA- or brassino... 55 6e-022
gb|CN127536.1|CN127536 RHOH1_23_C08.g3_A002 Acid- and alkal... 55 7e-022
gb|CN131058.1|CN131058 RHOH1_45_C08.g1_A002 Acid- and alkal... 55 7e-022
gb|CX606542.1|CX606542 ANR1_3_D05.g1_A002 Anaerobic roots S... 55 7e-022
gb|CF433684.1|CF433684 NIT1_28_C01.g1_A002 Nitrogen-deficie... 55 7e-022
gb|CD428746.1|CD428746 ETH1_35_E11.g1_A002 Ethylene-treated... 55 7e-022
gb|BE355300.1|BE355300 DG1_114_D07.b1_A002 Dark Grown 1 (DG... 55 7e-022
gb|BE355386.1|BE355386 DG1_114_D07.b2_A002 Dark Grown 1 (DG... 55 7e-022
gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-defic... 93 7e-022
gb|CW087332.1|CW087332 104_431_10947561_116_32569_033 Sorgh... 52 9e-022
gb|CW311013.1|CW311013 104_800_11470012_116_36243_010 Sorgh... 52 1e-021
gb|CD230442.1|CD230442 SS1_43_A09.g1_A012 Salt-stressed see... 60 1e-021
gb|U87454.1|SBU87454 Sorghum bicolor dihydroflavonol-4-redu... 69 2e-021
gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1)... 66 2e-021
gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed see... 62 2e-021
gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stres... 62 2e-021
gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots ... 62 2e-021
gb|CW287590.1|CW287590 104_765_11411495_116_35521_084 Sorgh... 70 2e-021
gb|BZ367897.1|BZ367897 id07b12.g1 WGS-SbicolorF (JM107 adap... 68 3e-021
gb|CW198436.1|CW198436 104_623_11182973_148_37057_029 Sorgh... 52 3e-021
gb|CW247120.1|CW247120 104_708_11221624_148_36079_064 Sorgh... 68 3e-021
gb|CW408711.1|CW408711 fsbb001f102l13k0 Sorghum methylation... 64 4e-021
gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots ... 62 4e-021
gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficie... 65 6e-021
gb|CD213720.1|CD213720 HS1_52_G04.g1_A012 Heat-shocked seed... 60 7e-021
gb|CW317777.1|CW317777 104_809_11473594_116_35860_035 Sorgh... 52 8e-021
gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1... 59 8e-021
>emb|AX512962.1| Sequence 7 from Patent WO02063021
Length = 697
Score = 289 bits (625), Expect(3) = e-118
Identities = 121/129 (93%), Positives = 126/129 (97%)
Frame = -1 / +1
Query: 1124 VTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEG 945
VTGASGF+ASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEG
Sbjct: 1 VTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEG 180
Query: 944 SFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSS 765
SFD+AVM C+GVFHTASPVLAK DS+SKE+TL PAVNGTLNVLRSCKKNPFLKRVVLTSS
Sbjct: 181 SFDNAVMDCDGVFHTASPVLAKSDSSSKEETLCPAVNGTLNVLRSCKKNPFLKRVVLTSS 360
Query: 764 SSAVRIRDD 738
SSAVRIRDD
Sbjct: 361 SSAVRIRDD 387
Score = 271 bits (587), Expect(2) = e-131
Identities = 118/128 (92%), Positives = 121/128 (94%)
Frame = +1 / -3
Query: 739 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLVESGLARTGDAVWNTPS 918
SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAG SVSSLL+ES LA TGDAVW TPS
Sbjct: 386 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGQSVSSLLLESDLASTGDAVWKTPS 207
Query: 919 QAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPDSRSRLISQE 1098
Q++TALSKLPSSNRSARTICSLSLAPGNFQR AVFW*FPGSLTVPTT*YPDS SRLISQE
Sbjct: 206 QSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFW*FPGSLTVPTT*YPDSSSRLISQE 27
Query: 1099 ATKPEAPV 1122
A KPEAPV
Sbjct: 26 AIKPEAPV 3
Score = 219 bits (473), Expect(2) = e-131
Identities = 92/100 (92%), Positives = 95/100 (95%)
Frame = +1 / -3
Query: 424 TRMWLLATSSMWTYPILPYELNLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMP 603
TRMWL+ATSSM TYPILP ELNLAVSPWN+PRTSEAVTHSSWDKLGPITNDGRTVTRSM
Sbjct: 695 TRMWLVATSSM*TYPILP*ELNLAVSPWNKPRTSEAVTHSSWDKLGPITNDGRTVTRSML 516
Query: 604 FSLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSSEML 723
FSLANSHAAFSANT ARAYH CIFSQSGTELHVVSSSE+L
Sbjct: 515 FSLANSHAAFSANTFARAYHSCIFSQSGTELHVVSSSEIL 396
Score = 197 bits (425), Expect(2) = 1e-076
Identities = 86/115 (74%), Positives = 90/115 (78%)
Frame = -1 / +1
Query: 767 SSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLV 588
+SS+ +R NISLDETTWSSVPLCEKM LWYAL EN IDLV
Sbjct: 352 TSSSSAVRIRDDDQPNISLDETTWSSVPLCEKMQLWYALAKVFAEKAAWEFAKENNIDLV 531
Query: 587 TVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILV 423
TVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVA+SHILV
Sbjct: 532 TVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVATSHILV 696
Score = 194 bits (418), Expect(2) = 5e-088
Identities = 82/123 (66%), Positives = 97/123 (78%)
Frame = +3 / -2
Query: 738 VVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLLASRVGFSEDGGCSVEYTL 917
++P+PH K++PFQ+ VLLARS H+QSTV+ +R LLA+R+ FSE GCSVE +
Sbjct: 387 IIPNPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWTKRFLLATRIRFSEHRGCSVEDAI 208
Query: 918 TGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSPYHMISRLEEPFDKPR 1097
T H V+APFFQQISSH+LQPLF R*FPKV C LVISWV DSPYHMISRLE+PFDKPR
Sbjct: 207 TVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLVISWVSDSPYHMISRLEQPFDKPR 28
Query: 1098 GNK 1106
GNK
Sbjct: 27 GNK 19
Score = 184 bits (396), Expect(3) = 3e-066
Identities = 84/127 (66%), Positives = 92/127 (72%)
Frame = -3 / +3
Query: 1122 NRGLRLCCLLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXXXAS*SVGRRE 943
NRG RL CLLAYQTA RVWISCGRDCQ PRKSPK+S PLEITW AS*SVGRRE
Sbjct: 3 NRGFRLYCLLAYQTAARVWISCGRDCQRPRKSPKNSTPLEITWCQREAANCAS*SVGRRE 182
Query: 942 LRQRRDGL*GCIPHCIPRPR*TRLY*QGGHARPCGERYSERAEIVQEEPVPEKGRPYVFV 763
L Q GL* +PHCIP R* *QGG+A +RYSE A+IVQEEP+ EKG YVF+
Sbjct: 183 L*QCCHGL*WRLPHCIPCAR*I*F**QGGNALSSSKRYSECAKIVQEEPISEKGCSYVFI 362
Query: 762 VCGEDQG 742
+C ED G
Sbjct: 363 ICSED*G 383
Score = 152 bits (327), Expect(2) = 5e-088
Identities = 66/100 (66%), Positives = 72/100 (72%)
Frame = +3 / -2
Query: 423 HQXXXXXXXXXXXXPHSSVRAEPCRVALE*A*DV*SGNA*FVGQTGPDHERREDSHKVDA 602
HQ HSSVR EPCRV LE*A*D+*SGN *F+G TGPDH+ EDSHKVD
Sbjct: 696 HQDVAGRNIVDVNVSHSSVRTEPCRVTLE*A*DI*SGNT*FMG*TGPDHK*WEDSHKVDV 517
Query: 603 VLLGELPRRFLCKYLG*GIP*MHLLAEWHGAPCRFVQRDV 722
VLLGE P RFLCKYL *GIP*+HL EWH APC F+Q D+
Sbjct: 516 VLLGEFPCRFLCKYLR*GIP*LHLFTEWHRAPCCFIQ*DI 397
Score = 112 bits (240), Expect(3) = e-118
Identities = 42/58 (72%), Positives = 53/58 (91%)
Frame = -3 / +3
Query: 723 *HLAGRNDMELRATLREDASMVCPSQGICRESGVGVRQGERHRPCDCPPVVRDRAQFV 550
*+L G N+MEL ATL +DA+MVCPS+GICRESG+G+RQGE+HRPCDCPP++ DRAQF+
Sbjct: 396 *YLTG*NNMELCATL*KDAAMVCPSEGICRESGMGIRQGEQHRPCDCPPIICDRAQFI 569
Score = 111 bits (238), Expect(2) = 1e-076
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -2 / +2
Query: 1066 DIMW*GLSGTQEITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPS 887
DIMW*GLS TQEITK+Q TFGNYL KRGCK CELICWKKGA T W V STLHP
Sbjct: 59 DIMW*GLSETQEITKKQHTFGNYLVPKRGCKLCELICWKKGALTMLSWTVMASSTLHPLC 238
Query: 886 SLN 878
SLN
Sbjct: 239 SLN 247
Score = 97.3 bits (206), Expect(4) = 7e-056
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +2 / -1
Query: 956 TDQLARFAASL*RQVISKGGLSFGDFLGP*QSLPHDIQTRGAV**AKRQQSLRPRL 1123
TDQLA+FAASL QVISKG L FGDFLG *QSLPHDIQTR AV**AKRQ SL+PRL
Sbjct: 169 TDQLAQFAASLWHQVISKGVLFFGDFLGL*QSLPHDIQTRAAV**AKRQ*SLKPRL 2
Score = 79.9 bits (168), Expect(4) = 7e-056
Identities = 33/55 (60%), Positives = 34/55 (61%)
Frame = +2 / -1
Query: 554 NWARSRTTGGQSQGRCRSPWRTPTPLSLQIPWLGHTIDAXXXXXXXXXXXXXPAR 718
NWARS+ GGQSQGRC SPWR P PLSLQIP LGHTI A P R
Sbjct: 565 NWARSQMMGGQSQGRCCSPWRIPMPLSLQIPSLGHTIAASFHRVAQSSMLFHPVR 401
Score = 73.5 bits (154), Expect(4) = 7e-056
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / -1
Query: 743 P*SSPQTTKT*GRPFSGTGSSCTISARSEYRSPQGRACPPC**SRV*RGRGMQCG 907
P*SS Q KT* +PFS GSSCTI A SEYR +A PPC *+++*R +GMQCG
Sbjct: 382 P*SSLQMMKT*EQPFSEMGSSCTILAHSEYRLLLDKAFPPCY*NQI*RAQGMQCG 218
Score = 67.0 bits (140), Expect(3) = e-118
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = -2 / +2
Query: 562 GPVCPTNYALPLQTS*AYSKATRQGSARTEEWGXXXXXXXXXXXSWC 422
GPV P NY LPLQ S*AYSK TRQGS TEEW SWC
Sbjct: 557 GPVYPMNYVLPLQMS*AYSKVTRQGSVLTEEWDTFTSTMLRPATSWC 697
Score = 65.2 bits (136), Expect(3) = 3e-066
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 718 SRWTKRHGAPCHSARRCIYGMP*PRYLQRKRRG 620
S W K+HGA CHS +RC YGMP* RYLQRKR G
Sbjct: 401 SHWMKQHGALCHSVKRCSYGMP*RRYLQRKRHG 499
Score = 43.7 bits (89), Expect(3) = 3e-066
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -3 / +3
Query: 498 HGKVQLVRKNGVRPHRRRCEQ 436
HGKVQ +RKNG+R HRR C+Q
Sbjct: 621 HGKVQFLRKNGIRSHRRCCDQ 683
Score = 25.8 bits (50), Expect(4) = 7e-056
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 467 PFFRTS*TLPC 499
PFFR +*TLPC
Sbjct: 652 PFFRKN*TLPC 620
>gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 524
Score = 305 bits (661), Expect(2) = 2e-089
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = -1 / +1
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
++KGKVCVTGASGF+ASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR
Sbjct: 37 SNKGKVCVTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 216
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLK 786
ADLLEEGSFD+AVM C+GVFHTASPVLAK DS+SKE+TLVPAVNGTLNVLRSCKKNPFLK
Sbjct: 217 ADLLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSKEETLVPAVNGTLNVLRSCKKNPFLK 396
Query: 785 RVVLTSSSSAVRIRDD 738
RVVLTSSSSAVRIRDD
Sbjct: 397 RVVLTSSSSAVRIRDD 444
Score = 289 bits (626), Expect(2) = 4e-087
Identities = 125/134 (93%), Positives = 128/134 (95%)
Frame = +1 / -1
Query: 739 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLVESGLARTGDAVWNTPS 918
SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLL+ES LA TGDAVW TPS
Sbjct: 443 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLLESDLASTGDAVWKTPS 264
Query: 919 QAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPDSRSRLISQE 1098
Q++TALSKLPSSNRSARTICSLSLAPGNFQR AVFW*FPGSLTVPTT*YPDS SRLISQE
Sbjct: 263 QSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFW*FPGSLTVPTT*YPDSSSRLISQE 84
Query: 1099 ATKPEAPVTHTLPL 1140
A KPEAPVTHTLPL
Sbjct: 83 AIKPEAPVTHTLPL 42
Score = 195 bits (420), Expect(2) = 9e-056
Identities = 82/123 (66%), Positives = 98/123 (79%)
Frame = +3 / -3
Query: 738 VVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLLASRVGFSEDGGCSVEYTL 917
++P+PH K++PFQ+ VLLARS H+QSTV+ ++R LLA+R+ FSE GCSVE +
Sbjct: 444 IIPNPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWNKRFLLATRIRFSEHRGCSVEDAI 265
Query: 918 TGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSPYHMISRLEEPFDKPR 1097
T H V+APFFQQISSH+LQPLF R*FPKV C LVISWV DSPYHMISRLE+PFDKPR
Sbjct: 264 TVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLVISWVSDSPYHMISRLEQPFDKPR 85
Query: 1098 GNK 1106
GNK
Sbjct: 84 GNK 76
Score = 192 bits (413), Expect(2) = 2e-052
Identities = 89/137 (64%), Positives = 97/137 (70%)
Frame = -3 / +3
Query: 1152 GPSKQGQGMRNRGLRLCCLLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXX 973
G KQGQ M N G RL CLLAYQTA RVWISCGRDCQ PRKSPK+S PLEITW
Sbjct: 30 GELKQGQSMCNWGFRLYCLLAYQTAARVWISCGRDCQRPRKSPKNSTPLEITWCQREAAN 209
Query: 972 XAS*SVGRRELRQRRDGL*GCIPHCIPRPR*TRLY*QGGHARPCGERYSERAEIVQEEPV 793
AS*SVGRREL Q GL* +PHCIP R* *QGG+A +RYSE A+IVQEEP+
Sbjct: 210 CAS*SVGRREL*QCCHGL*WRLPHCIPCAR*I*F**QGGNACSSSKRYSECAKIVQEEPI 389
Query: 792 PEKGRPYVFVVCGEDQG 742
EKG YVF++C ED G
Sbjct: 390 SEKGCSYVFIICSED*G 440
Score = 111 bits (238), Expect(2) = 2e-039
Identities = 52/67 (77%), Positives = 56/67 (83%)
Frame = +2 / -2
Query: 956 TDQLARFAASL*RQVISKGGLSFGDFLGP*QSLPHDIQTRGAV**AKRQQSLRPRLRIPC 1135
TDQLA+FAASL QVISKG L FGDFLG *QSLPHDIQTR AV**AKRQ SL+P+L I C
Sbjct: 226 TDQLAQFAASLWHQVISKGVLFFGDFLGL*QSLPHDIQTRAAV**AKRQ*SLKPQLHILC 47
Query: 1136 PCLLGPN 1156
PCL P+
Sbjct: 46 PCLSSPS 26
Score = 111 bits (238), Expect(2) = 2e-036
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -2 / +2
Query: 1066 DIMW*GLSGTQEITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPS 887
DIMW*GLS TQEITK+Q TFGNYL KRGCK CELICWKKGA T W V STLHP
Sbjct: 116 DIMW*GLSETQEITKKQHTFGNYLVPKRGCKLCELICWKKGALTMLSWTVMASSTLHPLC 295
Query: 886 SLN 878
SLN
Sbjct: 296 SLN 304
Score = 72.5 bits (152), Expect(2) = 2e-039
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / -2
Query: 743 P*SSPQTTKT*GRPFSGTGSSCTISARSEYRSPQGRACPPC**SRV*RGRGMQCG 907
P*SS Q KT* +PFS GSSCTI A SEYR +A PPC *+++*R +GMQCG
Sbjct: 439 P*SSLQMMKT*EQPFSEMGSSCTILAHSEYRLLLEQAFPPCY*NQI*RAQGMQCG 275
Score = 62.5 bits (130), Expect(2) = 2e-036
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -1 / +1
Query: 767 SSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYA 654
+SS+ +R NISLDETTWSSVPLCEKM LWYA
Sbjct: 409 TSSSSAVRIRDDDQPNISLDETTWSSVPLCEKMQLWYA 522
Score = 54.7 bits (113), Expect(2) = 4e-087
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1 / -1
Query: 652 RAYHRCIFSQSGTELHVVSSSEML 723
RAYH CIFSQSGTELHVVSSSE+L
Sbjct: 524 RAYHSCIFSQSGTELHVVSSSEIL 453
Score = 46.4 bits (95), Expect(2) = 2e-089
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 718 SRWTKRHGAPCHSARRCIYGMP 653
S W K+HGA CHS +RC YGMP
Sbjct: 458 SHWMKQHGALCHSVKRCSYGMP 523
Score = 44.1 bits (90), Expect(2) = 9e-056
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / -3
Query: 654 GIP*MHLLAEWHGAPCRFVQRDV 722
GIP*+HL EWH APC F+Q D+
Sbjct: 522 GIP*LHLFTEWHRAPCCFIQ*DI 454
Score = 36.3 bits (73), Expect(2) = 2e-052
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3 / +3
Query: 723 *HLAGRNDMELRATLREDASMVCP 652
*+L G N+MEL ATL +DA+MVCP
Sbjct: 453 *YLTG*NNMELCATL*KDAAMVCP 524
>gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 305 bits (661), Expect(2) = 2e-089
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = -1 / +1
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
++KGKVCVTGASGF+ASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR
Sbjct: 10 SNKGKVCVTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 189
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLK 786
ADLLEEGSFD+AVM C+GVFHTASPVLAK DS+SKE+TLVPAVNGTLNVLRSCKKNPFLK
Sbjct: 190 ADLLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSKEETLVPAVNGTLNVLRSCKKNPFLK 369
Query: 785 RVVLTSSSSAVRIRDD 738
RVVLTSSSSAVRIRDD
Sbjct: 370 RVVLTSSSSAVRIRDD 417
Score = 289 bits (626), Expect(2) = 4e-087
Identities = 125/134 (93%), Positives = 128/134 (95%)
Frame = +1 / -1
Query: 739 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLVESGLARTGDAVWNTPS 918
SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLL+ES LA TGDAVW TPS
Sbjct: 416 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLLESDLASTGDAVWKTPS 237
Query: 919 QAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPDSRSRLISQE 1098
Q++TALSKLPSSNRSARTICSLSLAPGNFQR AVFW*FPGSLTVPTT*YPDS SRLISQE
Sbjct: 236 QSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFW*FPGSLTVPTT*YPDSSSRLISQE 57
Query: 1099 ATKPEAPVTHTLPL 1140
A KPEAPVTHTLPL
Sbjct: 56 AIKPEAPVTHTLPL 15
Score = 195 bits (420), Expect(2) = 9e-056
Identities = 82/123 (66%), Positives = 98/123 (79%)
Frame = +3 / -3
Query: 738 VVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLLASRVGFSEDGGCSVEYTL 917
++P+PH K++PFQ+ VLLARS H+QSTV+ ++R LLA+R+ FSE GCSVE +
Sbjct: 417 IIPNPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWNKRFLLATRIRFSEHRGCSVEDAI 238
Query: 918 TGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSPYHMISRLEEPFDKPR 1097
T H V+APFFQQISSH+LQPLF R*FPKV C LVISWV DSPYHMISRLE+PFDKPR
Sbjct: 237 TVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLVISWVSDSPYHMISRLEQPFDKPR 58
Query: 1098 GNK 1106
GNK
Sbjct: 57 GNK 49
Score = 190 bits (410), Expect(2) = 5e-052
Identities = 88/134 (65%), Positives = 96/134 (71%)
Frame = -3 / +3
Query: 1143 KQGQGMRNRGLRLCCLLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXXXAS 964
KQGQ M N G RL CLLAYQTA RVWISCGRDCQ PRKSPK+S PLEITW AS
Sbjct: 12 KQGQSMCNWGFRLYCLLAYQTAARVWISCGRDCQRPRKSPKNSTPLEITWCQREAANCAS 191
Query: 963 *SVGRRELRQRRDGL*GCIPHCIPRPR*TRLY*QGGHARPCGERYSERAEIVQEEPVPEK 784
*SVGRREL Q GL* +PHCIP R* *QGG+A +RYSE A+IVQEEP+ EK
Sbjct: 192 *SVGRREL*QCCHGL*WRLPHCIPCAR*I*F**QGGNACSSSKRYSECAKIVQEEPISEK 371
Query: 783 GRPYVFVVCGEDQG 742
G YVF++C ED G
Sbjct: 372 GCSYVFIICSED*G 413
Score = 111 bits (238), Expect(2) = 2e-036
Identities = 47/63 (74%), Positives = 48/63 (76%)
Frame = -2 / +2
Query: 1066 DIMW*GLSGTQEITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPS 887
DIMW*GLS TQEITK+Q TFGNYL KRGCK CELICWKKGA T W V STLHP
Sbjct: 89 DIMW*GLSETQEITKKQHTFGNYLVPKRGCKLCELICWKKGALTMLSWTVMASSTLHPLC 268
Query: 886 SLN 878
SLN
Sbjct: 269 SLN 277
Score = 109 bits (232), Expect(2) = 2e-038
Identities = 51/63 (80%), Positives = 54/63 (85%)
Frame = +2 / -2
Query: 956 TDQLARFAASL*RQVISKGGLSFGDFLGP*QSLPHDIQTRGAV**AKRQQSLRPRLRIPC 1135
TDQLA+FAASL QVISKG L FGDFLG *QSLPHDIQTR AV**AKRQ SL+P+L I C
Sbjct: 199 TDQLAQFAASLWHQVISKGVLFFGDFLGL*QSLPHDIQTRAAV**AKRQ*SLKPQLHILC 20
Query: 1136 PCL 1144
PCL
Sbjct: 19 PCL 11
Score = 72.5 bits (152), Expect(2) = 2e-038
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / -2
Query: 743 P*SSPQTTKT*GRPFSGTGSSCTISARSEYRSPQGRACPPC**SRV*RGRGMQCG 907
P*SS Q KT* +PFS GSSCTI A SEYR +A PPC *+++*R +GMQCG
Sbjct: 412 P*SSLQMMKT*EQPFSEMGSSCTILAHSEYRLLLEQAFPPCY*NQI*RAQGMQCG 248
Score = 62.5 bits (130), Expect(2) = 2e-036
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -1 / +1
Query: 767 SSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYA 654
+SS+ +R NISLDETTWSSVPLCEKM LWYA
Sbjct: 382 TSSSSAVRIRDDDQPNISLDETTWSSVPLCEKMQLWYA 495
Score = 54.7 bits (113), Expect(2) = 4e-087
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1 / -1
Query: 652 RAYHRCIFSQSGTELHVVSSSEML 723
RAYH CIFSQSGTELHVVSSSE+L
Sbjct: 497 RAYHSCIFSQSGTELHVVSSSEIL 426
Score = 46.4 bits (95), Expect(2) = 2e-089
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 718 SRWTKRHGAPCHSARRCIYGMP 653
S W K+HGA CHS +RC YGMP
Sbjct: 431 SHWMKQHGALCHSVKRCSYGMP 496
Score = 44.1 bits (90), Expect(2) = 9e-056
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / -3
Query: 654 GIP*MHLLAEWHGAPCRFVQRDV 722
GIP*+HL EWH APC F+Q D+
Sbjct: 495 GIP*LHLFTEWHRAPCCFIQ*DI 427
Score = 36.3 bits (73), Expect(2) = 5e-052
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3 / +3
Query: 723 *HLAGRNDMELRATLREDASMVCP 652
*+L G N+MEL ATL +DA+MVCP
Sbjct: 426 *YLTG*NNMELCATL*KDAAMVCP 497
>gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 496
Score = 300 bits (650), Expect(2) = 1e-082
Identities = 126/136 (92%), Positives = 133/136 (97%)
Frame = -1 / +1
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
++KGKVCVTGASGF+ASWLIKRLLESGYHVVGTVRDPGN QKTAHLWKLPGAKERLQIVR
Sbjct: 37 SNKGKVCVTGASGFIASWLIKRLLESGYHVVGTVRDPGNLQKTAHLWKLPGAKERLQIVR 216
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLK 786
ADLLEEGSFD+AVM C+GVFHTASPVLAK DS+SKE+TLVPAVNGTLNVLRSCKKNPFLK
Sbjct: 217 ADLLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSKEETLVPAVNGTLNVLRSCKKNPFLK 396
Query: 785 RVVLTSSSSAVRIRDD 738
RVVLTSSSSAVRIRDD
Sbjct: 397 RVVLTSSSSAVRIRDD 444
Score = 287 bits (621), Expect(2) = 2e-079
Identities = 124/134 (92%), Positives = 127/134 (94%)
Frame = +1 / -3
Query: 739 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLVESGLARTGDAVWNTPS 918
SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLL+ES LA TGDAVW TPS
Sbjct: 443 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLLESDLASTGDAVWKTPS 264
Query: 919 QAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPDSRSRLISQE 1098
Q++TALSKLPSSNRSARTICSLSLAPGNFQR AVFW FPGSLTVPTT*YPDS SRLISQE
Sbjct: 263 QSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFWRFPGSLTVPTT*YPDSSSRLISQE 84
Query: 1099 ATKPEAPVTHTLPL 1140
A KPEAPVTHTLPL
Sbjct: 83 AIKPEAPVTHTLPL 42
Score = 192 bits (414), Expect(2) = 1e-050
Identities = 81/123 (65%), Positives = 97/123 (78%)
Frame = +3 / -2
Query: 738 VVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLLASRVGFSEDGGCSVEYTL 917
++P+PH K++PFQ+ VLLARS H+QSTV+ ++R LLA+R+ FSE GCSVE +
Sbjct: 444 IIPNPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWNKRFLLATRIRFSEHRGCSVEDAI 265
Query: 918 TGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSPYHMISRLEEPFDKPR 1097
T H V+APFFQQISSH+LQPLF R*FPKV C L ISWV DSPYHMISRLE+PFDKPR
Sbjct: 264 TVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLEISWVSDSPYHMISRLEQPFDKPR 85
Query: 1098 GNK 1106
GNK
Sbjct: 84 GNK 76
Score = 192 bits (413), Expect = 1e-047
Identities = 89/137 (64%), Positives = 97/137 (70%)
Frame = -3 / +3
Query: 1152 GPSKQGQGMRNRGLRLCCLLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXX 973
G KQGQ M N G RL CLLAYQTA RVWISCGRDCQ PRKSPK+S PLEITW
Sbjct: 30 GELKQGQSMCNWGFRLYCLLAYQTAARVWISCGRDCQRPRKSPKNSTPLEITWCQREAAN 209
Query: 972 XAS*SVGRRELRQRRDGL*GCIPHCIPRPR*TRLY*QGGHARPCGERYSERAEIVQEEPV 793
AS*SVGRREL Q GL* +PHCIP R* *QGG+A +RYSE A+IVQEEP+
Sbjct: 210 CAS*SVGRREL*QCCHGL*WRLPHCIPCAR*I*F**QGGNACSSSKRYSECAKIVQEEPI 389
Query: 792 PEKGRPYVFVVCGEDQG 742
EKG YVF++C ED G
Sbjct: 390 SEKGCSYVFIICSED*G 440
Score = 111 bits (238), Expect(2) = 2e-039
Identities = 52/67 (77%), Positives = 56/67 (83%)
Frame = +2 / -1
Query: 956 TDQLARFAASL*RQVISKGGLSFGDFLGP*QSLPHDIQTRGAV**AKRQQSLRPRLRIPC 1135
TDQLA+FAASL QVISKG L FGDFLG *QSLPHDIQTR AV**AKRQ SL+P+L I C
Sbjct: 226 TDQLAQFAASLWHQVISKGVLFFGDFLGL*QSLPHDIQTRAAV**AKRQ*SLKPQLHILC 47
Query: 1136 PCLLGPN 1156
PCL P+
Sbjct: 46 PCLSSPS 26
Score = 110 bits (234), Expect(2) = 6e-029
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = -2 / +2
Query: 1066 DIMW*GLSGTQEITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPS 887
DIMW*GLS TQEI+K+Q TFGNYL KRGCK CELICWKKGA T W V STLHP
Sbjct: 116 DIMW*GLSETQEISKKQHTFGNYLVPKRGCKLCELICWKKGALTMLSWTVMASSTLHPLC 295
Query: 886 SLN 878
SLN
Sbjct: 296 SLN 304
Score = 72.5 bits (152), Expect(2) = 2e-039
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / -1
Query: 743 P*SSPQTTKT*GRPFSGTGSSCTISARSEYRSPQGRACPPC**SRV*RGRGMQCG 907
P*SS Q KT* +PFS GSSCTI A SEYR +A PPC *+++*R +GMQCG
Sbjct: 439 P*SSLQMMKT*EQPFSEMGSSCTILAHSEYRLLLEQAFPPCY*NQI*RAQGMQCG 275
Score = 39.6 bits (80), Expect(2) = 6e-029
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1 / +1
Query: 767 SSSAVRIRDDGGQSSNISLDETTWSSVPL 681
+SS+ +R NISLDETTWSSVPL
Sbjct: 409 TSSSSAVRIRDDDQPNISLDETTWSSVPL 495
Score = 31.3 bits (62), Expect(2) = 2e-079
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / -3
Query: 682 SGTELHVVSSSEML 723
SGTELHVVSSSE+L
Sbjct: 494 SGTELHVVSSSEIL 453
Score = 29.5 bits (58), Expect(2) = 1e-050
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 681 EWHGAPCRFVQRDV 722
EWH APC F+Q D+
Sbjct: 495 EWHRAPCCFIQ*DI 454
Score = 28.6 bits (56), Expect(2) = 1e-082
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 718 SRWTKRHGAPCHS 680
S W K+HGA CHS
Sbjct: 458 SHWMKQHGALCHS 496
>gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 196 bits (423), Expect(2) = 5e-074
Identities = 79/94 (84%), Positives = 84/94 (89%)
Frame = -1 / +3
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A KGKVCVTGASGF+ASWLIKRLLESGYHV+GTVRDPGNH+K HLW L GAKERLQ+
Sbjct: 15 ASTGKGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPGNHKKVGHLWVLEGAKERLQL 194
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDS 870
VRADLLEEGSFD AVMACEGVFHTASPV+ K DS
Sbjct: 195 VRADLLEEGSFDDAVMACEGVFHTASPVITKSDS 296
Score = 151 bits (325), Expect(2) = 6e-055
Identities = 68/91 (74%), Positives = 71/91 (78%)
Frame = +1 / -2
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLT 1047
+ES L TGDAVW TPSQAITA SKLPSS RSA T CSLS AP QR F *FPGSLT
Sbjct: 298 LESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FPGSLT 119
Query: 1048 VPTT*YPDSRSRLISQEATKPEAPVTHTLPL 1140
VP T YPDSRSRL+SQEA KP+APVT TLPL
Sbjct: 118 VPRTWYPDSRSRLMSQEAMKPDAPVTQTLPL 26
Score = 103 bits (220), Expect(2) = 5e-074
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = -1 / +3
Query: 872 STSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTWS 693
S SKE+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+WS
Sbjct: 288 SDSKEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWS 467
Query: 692 SVPLCE 675
S+ CE
Sbjct: 468 SIEYCE 485
Score = 94.5 bits (200), Expect(2) = 4e-025
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +3 / -1
Query: 873 VGFSEDGGCSVEYTLTGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSP 1052
+ FS+D CSVE LT HH V+APF Q++SSH LQPL A P+V LVI WV D
Sbjct: 293 IRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEVSYFLVIPWVSDCS 114
Query: 1053 YHMISRLEEPFDKPRGNK 1106
M+ RL++P D+P G++
Sbjct: 113 EDMVPRLKKPLDEPGGDE 60
Score = 84.9 bits (179), Expect(2) = 6e-055
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = +1 / -2
Query: 676 SQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSV 855
SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+ TFRVPF A S+
Sbjct: 484 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSI 305
Query: 856 SSL 864
SSL
Sbjct: 304 SSL 296
Score = 64.8 bits (135), Expect(2) = 8e-023
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = -3 / +2
Query: 864 QGGHARPCGERYSERAEIVQEEPVPEKGRPYVFVVCGEDQGRRWPVQ*HLAGRNDMELRA 685
QGG+A +R+SER+ +QEE +P++G P VFV EDQGR P * +AG N MEL
Sbjct: 296 QGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQGRSRPAP*RVAG*NIMELH* 475
Query: 684 TLR 676
LR
Sbjct: 476 VLR 484
Score = 64.3 bits (134), Expect(2) = 8e-023
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = -3 / +2
Query: 1098 LLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXXXAS*SVGRRELRQRRDGL 919
LLA+Q A VW+ C R+ Q PR+S + PL S* +G REL +R DGL
Sbjct: 68 LLAHQAAS*VWVPCPRNSQRPRESQESRTPLGFGRRKGEAAACES*PLGGREL*RRCDGL 247
Query: 918 *GCIPHCI 895
*G +PHCI
Sbjct: 248 *GRLPHCI 271
Score = 42.3 bits (86), Expect(2) = 4e-025
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +3 / -1
Query: 675 LAEWHGAPCRFVQRDVTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDER 854
LA +GAP F+Q+ V G V DPH +D+P + +LLA + +VQS V+ +
Sbjct: 485 LAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC*IKH 306
Query: 855 VLLASR 872
LL R
Sbjct: 305 FLLGIR 288
>gb|BI211709.1|BI211709 IP1_60_H10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 578
Score = 270 bits (585), Expect = 2e-071
Identities = 111/116 (95%), Positives = 112/116 (96%)
Frame = -1 / +2
Query: 506 QGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLDNDELVSSLAKRYPI 327
QGDTARFSSYGRMGYVHIDDVASSHILVYE P A GRYLCSSVVLDNDELVS LAKRYP+
Sbjct: 2 QGDTARFSSYGRMGYVHIDDVASSHILVYETPHATGRYLCSSVVLDNDELVSLLAKRYPV 181
Query: 326 FPIPRRLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL* 159
FPIPRRLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL*
Sbjct: 182 FPIPRRLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL* 349
Score = 231 bits (499), Expect(2) = 2e-061
Identities = 93/116 (80%), Positives = 94/116 (81%)
Frame = +1 / -3
Query: 160 HRGHSSRCPWSLSDCTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLRGMGNIG*R 339
HRGHSSR PWSLSD TQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLRGMGN G R
Sbjct: 348 HRGHSSRWPWSLSDWTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLRGMGNTGYR 169
Query: 340 FAXXXXXXXXXXXXXXHRYLPAAWGASYTRMWLLATSSMWTYPILPYELNLAVSPW 507
FA HRYLP AWG SYTR+WLLATSSM TYPILP ELNLAVSPW
Sbjct: 168 FASKETSSSLSSTTELHRYLPVAWGVSYTRIWLLATSSM*TYPILP*ELNLAVSPW 1
Score = 154 bits (331), Expect(2) = 2e-043
Identities = 66/76 (86%), Positives = 67/76 (88%)
Frame = -3 / +1
Query: 387 QLSGAGQRRAGLLARETLPDIPHTPEAEQPLRQAVVPAEHVEAAGAGLQVQRGAGDVRRL 208
QL GAGQRRAGLLARE +P IPHTPE EQPLRQAVVPAEHVEAAGAGLQVQ AGDVRRL
Sbjct: 121 QLRGAGQRRAGLLAREAIPSIPHTPETEQPLRQAVVPAEHVEAAGAGLQVQGSAGDVRRL 300
Query: 207 RTVAQRPGTPAGVPPV 160
VAQRPG PAGVPPV
Sbjct: 301 CPVAQRPGPPAGVPPV 348
Score = 117 bits (251), Expect(2) = 3e-040
Identities = 43/65 (66%), Positives = 45/65 (69%)
Frame = -2 / +3
Query: 505 KATRQGSARTEEWGXXXXXXXXXXXSWCTRPPRPPGGTCAAQWCWTTTSWSPRSRNATRY 326
K TRQGS TEEW SWCTRPP PPG TCAA WCWTTTSWSP SR+ T+Y
Sbjct: 3 KVTRQGSVLTEEWDTFTSTMLPAAISWCTRPPMPPGDTCAAPWCWTTTSWSPCSRSDTQY 182
Query: 325 SPYPG 311
SPYPG
Sbjct: 183 SPYPG 197
Score = 74.4 bits (156), Expect(3) = 1e-025
Identities = 32/65 (49%), Positives = 35/65 (53%)
Frame = +3 / -2
Query: 312 PGYGEYRVAFRERGDQLXXXXXXXXXXXXXGGLGGLVHQXXXXXXXXXXXXPHSSVRAEP 491
PGYGEY V+ RE+GDQL GG+GGLVHQ HSSVR EP
Sbjct: 196 PGYGEYWVSLREQGDQLVVVQHHGAAQVSPGGMGGLVHQDMAAGNIVDVNVSHSSVRTEP 17
Query: 492 CRVAL 506
CRV L
Sbjct: 16 CRVTL 2
Score = 69.8 bits (146), Expect(2) = 3e-040
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -2 / +3
Query: 253 GWASSSEGCRRCSTTAYSRSKTRDTCWSAPCE 158
GWASSS CRRCSTT SRSKTR TCWSAPC+
Sbjct: 255 GWASSSGECRRCSTTVSSRSKTRATCWSAPCD 350
Score = 58.8 bits (122), Expect(3) = 1e-025
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +3 / -2
Query: 147 PHRSSQGALQQVSLVFERLYAVVEHLLHPSELE 245
P SSQGALQQV+LVFERL VVEHLLH ELE
Sbjct: 361 PQSSSQGALQQVALVFERLDTVVEHLLHSPELE 263
Score = 43.7 bits (89), Expect(2) = 2e-043
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -3 / +1
Query: 498 HGKVQLVRKNGVRPHRRRCEQ 436
HGKVQ +RKNG+R HRR C+Q
Sbjct: 10 HGKVQFLRKNGIRSHRRCCQQ 72
Score = 26.7 bits (52), Expect(2) = 2e-061
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 41 SARGHRDMTWNY*RK 85
S+R DMTWNY* K
Sbjct: 490 SSRKDADMTWNY*NK 446
Score = 23.1 bits (44), Expect(3) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -1
Query: 58 *HDVELLKKKKRINSGFGTQP 120
*HD+ELLK+ R + G P
Sbjct: 473 *HDMELLKQIDREQASSGRDP 411
>gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 454
Score = 154 bits (330), Expect(2) = 6e-065
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -1 / +3
Query: 1088 IKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGV 909
IKRLLESGYHV+GTVRDPGNH+K HLW L GAKERLQ+VRADLLEEGSFD AVMACEGV
Sbjct: 9 IKRLLESGYHVLGTVRDPGNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGV 188
Query: 908 FHTASPVLAKPDS 870
FHTASPV+ K DS
Sbjct: 189 FHTASPVITKSDS 227
Score = 120 bits (257), Expect(2) = 6e-048
Identities = 55/74 (74%), Positives = 56/74 (75%)
Frame = +1 / -1
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLT 1047
+ES L TGDAVW TPSQAITA SKLPSS RSA T CSLS AP QR F *FPGSLT
Sbjct: 229 LESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FPGSLT 50
Query: 1048 VPTT*YPDSRSRLI 1089
VP T YPDSRSRLI
Sbjct: 49 VPRTWYPDSRSRLI 8
Score = 116 bits (247), Expect(2) = 6e-065
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = -1 / +3
Query: 872 STSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTWS 693
S SKE+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+WS
Sbjct: 219 SDSKEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWS 398
Query: 692 SVPLCEKMHLWYAL 651
S+ CE + +WYA+
Sbjct: 399 SIEYCESLQIWYAV 440
Score = 92.7 bits (196), Expect(2) = 6e-048
Identities = 46/76 (60%), Positives = 49/76 (64%)
Frame = +1 / -1
Query: 637 ANTLARAYHRCIFSQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDL 816
A A AYH SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+
Sbjct: 454 ARIFATAYHIWRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHER 275
Query: 817 STFRVPFTAGTSVSSL 864
TFRVPF A S+SSL
Sbjct: 274 RTFRVPFIAELSISSL 227
Score = 88.1 bits (186), Expect(2) = 4e-025
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = +3 / -3
Query: 873 VGFSEDGGCSVEYTLTGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSP 1052
+ FS+D CSVE LT HH V+APF Q++SSH LQPL A P+V LVI WV D
Sbjct: 224 IRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEVSYFLVIPWVSDCS 45
Query: 1053 YHMISRLEEPFD 1088
M+ RL++P D
Sbjct: 44 EDMVPRLKKPLD 9
Score = 74.8 bits (157), Expect(2) = 1e-024
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = -3 / +2
Query: 864 QGGHARPCGERYSERAEIVQEEPVPEKGRPYVFVVCGEDQGRRWPVQ*HLAGRNDMELRA 685
QGG+A +R+SER+ +QEE +P++G P VFV EDQGR P * +AG N MEL
Sbjct: 227 QGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQGRSRPAP*RVAG*NIMELH* 406
Query: 684 TLREDASMVC 655
LRE MVC
Sbjct: 407 VLRESPDMVC 436
Score = 60.6 bits (126), Expect(2) = 1e-024
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -2 / +1
Query: 1045 SGTQEITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPSSLN 878
S TQ IT++ T G + A +RGC EL W+KGA T *W VR STLH SSLN
Sbjct: 52 SETQGITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSSLN 219
Score = 48.7 bits (100), Expect(2) = 4e-025
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = +3 / -3
Query: 654 GIP*MHLLAEWHGAPCRFVQRDVTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQST 833
GIP + LA +GAP F+Q+ V G V DPH +D+P + +LLA + +VQS
Sbjct: 437 GIPYLETLAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSA 258
Query: 834 VHRRDERVLLASR 872
V+ + LL R
Sbjct: 257 VYC*IKHFLLGIR 219
>gb|CW044897.1|CW044897 104_281_10509231_115_30234 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509231, DNA
sequence
Length = 552
Score = 150 bits (322), Expect(2) = 1e-060
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = -1 / +1
Query: 512 LFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLDNDELVSSLAKRY 333
L GDTARFSSYGRMGYVHIDDVASSHILVYE P A GRYLCSSVVLDNDELVS LAKRY
Sbjct: 118 LSSGDTARFSSYGRMGYVHIDDVASSHILVYETPHATGRYLCSSVVLDNDELVSLLAKRY 297
Query: 332 PIFPIPRRL 306
P+FPIPRRL
Sbjct: 298 PVFPIPRRL 324
Score = 119 bits (254), Expect(3) = 1e-047
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = -2 / +2
Query: 511 YSKATRQGSARTEEWGXXXXXXXXXXXSWCTRPPRPPGGTCAAQWCWTTTSWSPRSRNAT 332
+ + TRQGS TEEW SWCTRPP PPG TCAA WCWTTTSWSP SR+ T
Sbjct: 119 FLQVTRQGSVLTEEWDTFTSTMLPAAISWCTRPPMPPGDTCAAPWCWTTTSWSPCSRSDT 298
Query: 331 RYSPYPGG 308
+YSPYPGG
Sbjct: 299 QYSPYPGG 322
Score = 107 bits (228), Expect(2) = 1e-047
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +1 / -1
Query: 163 RGHSSRCPWSLSDCTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLR 315
+G + WSLSD TQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSL+
Sbjct: 549 QGALQQVAWSLSDWTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLQ 397
Score = 105 bits (223), Expect(2) = 1e-060
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = -1 / +2
Query: 311 RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECP 165
RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQ P
Sbjct: 401 RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQATCWSAP 547
Score = 105 bits (223), Expect(2) = 1e-047
Identities = 44/66 (66%), Positives = 46/66 (69%)
Frame = +1 / -2
Query: 307 SLRGMGNIG*RFAXXXXXXXXXXXXXXHRYLPAAWGASYTRMWLLATSSMWTYPILPYEL 486
+LRGMGN G RFA HRYLP AWG SYTR+WLLATSSM TYPILP EL
Sbjct: 323 NLRGMGNTGYRFASKETSSSLSSTTELHRYLPVAWGVSYTRIWLLATSSM*TYPILP*EL 144
Query: 487 NLAVSP 504
NLAVSP
Sbjct: 143 NLAVSP 126
Score = 84.9 bits (179), Expect(3) = 1e-047
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -3 / +1
Query: 312 EAEQPLRQAVVPAEHVEAAGAGLQVQRGAGDVRRLRTVAQRPG 184
+ EQPLRQAVVPAEHVEAAGAGLQVQ AGDVRRL VAQRPG
Sbjct: 400 QTEQPLRQAVVPAEHVEAAGAGLQVQGSAGDVRRLCPVAQRPG 528
Score = 56.1 bits (116), Expect(4) = 5e-024
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +3
Query: 387 QLSGAGQRRAGLLARETLPDIPHTPE 310
QL GAGQRRAGLLARE +P IPHTPE
Sbjct: 243 QLRGAGQRRAGLLAREAIPSIPHTPE 320
Score = 47.3 bits (97), Expect(4) = 5e-024
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 253 GWASSSEGCRRCSTTAYSRSKTR 185
GWASSS CRRCSTT SRSKTR
Sbjct: 459 GWASSSGECRRCSTTVSSRSKTR 527
Score = 43.7 bits (89), Expect(4) = 5e-024
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -3 / +3
Query: 498 HGKVQLVRKNGVRPHRRRCEQ 436
HGKVQ +RKNG+R HRR C+Q
Sbjct: 132 HGKVQFLRKNGIRSHRRCCQQ 194
Score = 26.7 bits (52), Expect(3) = 1e-047
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +2
Query: 193 KTRDTCWSAPC 161
K + TCWSAPC
Sbjct: 518 KDQATCWSAPC 550
Score = 24.9 bits (48), Expect(4) = 5e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +1
Query: 185 GHLLECPL* 159
GHLLECPL*
Sbjct: 526 GHLLECPL* 552
>gb|BI141675.1|BI141675 IP1_55_E06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 376
Score = 196 bits (423), Expect(2) = 1e-056
Identities = 79/94 (84%), Positives = 84/94 (89%)
Frame = -1 / +3
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A KGKVCVTGASGF+ASWLIKRLLESGYHV+GTVRDPGNH+K HLW L GAKERLQ+
Sbjct: 27 ASTGKGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPGNHKKVGHLWVLEGAKERLQL 206
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDS 870
VRADLLEEGSFD AVMACEGVFHTASPV+ K DS
Sbjct: 207 VRADLLEEGSFDDAVMACEGVFHTASPVITKSDS 308
Score = 151 bits (325), Expect(2) = 2e-041
Identities = 68/91 (74%), Positives = 71/91 (78%)
Frame = +1 / -1
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLT 1047
+ES L TGDAVW TPSQAITA SKLPSS RSA T CSLS AP QR F *FPGSLT
Sbjct: 310 LESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FPGSLT 131
Query: 1048 VPTT*YPDSRSRLISQEATKPEAPVTHTLPL 1140
VP T YPDSRSRL+SQEA KP+APVT TLPL
Sbjct: 130 VPRTWYPDSRSRLMSQEAMKPDAPVTQTLPL 38
Score = 46.0 bits (94), Expect(2) = 1e-056
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -1 / +3
Query: 872 STSKEDTLVPAVNGTLNVLRSCKKN 798
S SKE+ L A+NGTLNVLRSCKKN
Sbjct: 300 SDSKEEMLNSAINGTLNVLRSCKKN 374
Score = 40.0 bits (81), Expect(2) = 2e-041
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1 / -1
Query: 796 GFFLHDLSTFRVPFTAGTSVSSL 864
GFFLH+ TFRVPF A S+SSL
Sbjct: 376 GFFLHERRTFRVPFIAELSISSL 308
>gb|CW486984.1|CW486984 fsbb001f252j04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252j04, DNA
sequence
Length = 454
Score = 129 bits (276), Expect(3) = 4e-053
Identities = 52/59 (88%), Positives = 54/59 (91%)
Frame = +1 / -1
Query: 487 NLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAYH 663
N+ PWN+PRTSEAVTHSSWDKLGPITNDGRTVTRSM FSLANSHAAFSANT ARAYH
Sbjct: 433 NMNELPWNKPRTSEAVTHSSWDKLGPITNDGRTVTRSMLFSLANSHAAFSANTFARAYH 257
Score = 96.4 bits (204), Expect(3) = 1e-030
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +3 / -3
Query: 498 VALE*A*DV*SGNA*FVGQTGPDHERREDSHKVDAVLLGELPRRFLCKYLG*GIP*M 668
+ LE*A*D+*SGN *F+G TGPDH+ EDSHKVD VLLGE P RFLCKYL *GIP*+
Sbjct: 422 ITLE*A*DI*SGNT*FMG*TGPDHK*WEDSHKVDVVLLGEFPCRFLCKYLR*GIP*L 252
Score = 92.3 bits (195), Expect(3) = 3e-029
Identities = 41/60 (68%), Positives = 43/60 (71%)
Frame = -1 / +3
Query: 665 LWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARF 486
LWYAL EN IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQG++ F
Sbjct: 255 LWYALAKVFAEKAAWEFAKENNIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGNSFMF 434
Score = 91.3 bits (193), Expect(4) = 1e-044
Identities = 30/39 (76%), Positives = 38/39 (97%)
Frame = -3 / +2
Query: 666 SMVCPSQGICRESGVGVRQGERHRPCDCPPVVRDRAQFV 550
+MVCPS+GICRESG+G+RQGE+HRPCDCPP++ DRAQF+
Sbjct: 254 AMVCPSEGICRESGMGIRQGEQHRPCDCPPIICDRAQFI 370
Score = 74.4 bits (156), Expect(3) = 4e-053
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / -2
Query: 739 SSLILTADDEDVRTTLFRNGFFLHDLSTFRV 831
SSLILTADDEDVRTTLFRNGFFLHDLSTFRV
Sbjct: 93 SSLILTADDEDVRTTLFRNGFFLHDLSTFRV 1
Score = 72.1 bits (151), Expect(4) = 1e-044
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1 / +2
Query: 830 TLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD 738
TLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD
Sbjct: 2 TLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD 94
Score = 51.9 bits (107), Expect(3) = 3e-029
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -3 / +1
Query: 831 YSERAEIVQEEPVPEKGRPYVFVVCGEDQG 742
YSE A+IVQEEP+ EKG YVF++C ED G
Sbjct: 1 YSECAKIVQEEPISEKGCSYVFIICSED*G 90
Score = 45.5 bits (93), Expect(3) = 4e-053
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / -2
Query: 658 YHRCIFSQSGTELHVVSSSEML 723
Y CIFSQSGTELHVVSSSE+L
Sbjct: 168 YITCIFSQSGTELHVVSSSEIL 103
Score = 40.9 bits (83), Expect(3) = 1e-030
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +2 / -3
Query: 743 P*SSPQTTKT*GRPFSGTGSSCTISARSE 829
P*SS Q KT* +PFS GSSCTI A SE
Sbjct: 89 P*SSLQMMKT*EQPFSEMGSSCTILAHSE 3
Score = 39.1 bits (79), Expect(4) = 1e-044
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 562 GPVCPTNYALPLQTS*AYSKATRQGSA 482
GPV P NY LPLQ S*AYSK S+
Sbjct: 358 GPVYPMNYVLPLQMS*AYSKVIHSCSS 438
Score = 35.9 bits (72), Expect(3) = 1e-030
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 666 MHLLAEWHGAPCRFVQRDV 722
+HL EWH APC F+Q D+
Sbjct: 160 LHLFTEWHRAPCCFIQ*DI 104
Score = 35.9 bits (72), Expect(4) = 1e-044
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 718 SRWTKRHGAPCHSARRC 668
S W K+HGA CHS +RC
Sbjct: 108 SHWMKQHGALCHSVKRC 158
Score = 24.4 bits (47), Expect(3) = 3e-029
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 723 *HLAGRNDMELRATLREDA 667
*+L G N+MEL ATL +DA
Sbjct: 103 *YLTG*NNMELCATL*KDA 159
>gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_A06_A002 5', mRNA sequence
Length = 857
Score = 122 bits (260), Expect(4) = 2e-050
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASW+++ LL+ GY V TVRD + +KT HL L GAK+RL + +A LLE
Sbjct: 142 VCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPKKTLHLTALDGAKDRLHLFKASLLE 321
Query: 950 EGSFDSAVMACEGVFHTASP 891
EGSFD+AV C+ VFHTASP
Sbjct: 322 EGSFDAAVHGCDTVFHTASP 381
Score = 83.1 bits (175), Expect(4) = 7e-031
Identities = 44/80 (55%), Positives = 49/80 (61%)
Frame = +1 / -1
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G+AVWNT S TA SK PSS+R A CSLSLAP R VF+ S TV T P
Sbjct: 380 GEAVWNTVSHP*TAASKEPSSSRLALNKCSLSLAPSRAVRCNVFFGSAVSRTVARTV*PR 201
Query: 1072 SRSRLISQEATKPEAPVTHT 1131
SRS L Q+A P+APVTHT
Sbjct: 200 SRSSLTIQDAMYPDAPVTHT 141
Score = 62.5 bits (130), Expect(4) = 2e-050
Identities = 28/95 (29%), Positives = 48/95 (50%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A ++ ++ +++DET ++ +CEK WY L +NG
Sbjct: 484 VVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNG 663
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDT 495
++VT+ P+ VIGP L L +A +L L G +
Sbjct: 664 FEIVTINPAMVIGPLLQPTLNTSAEAILKLINGSS 768
Score = 49.2 bits (101), Expect(4) = 7e-031
Identities = 31/78 (39%), Positives = 39/78 (50%)
Frame = +1 / -1
Query: 481 ELNLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
EL P R + A+ S GPIT G VT S P SL N AA SA+ L + Y
Sbjct: 782 ELGYVDDPLINFRIASALVFSVGWSRGPITIAGFIVTISNPLSLENFQAACSASVLDKTY 603
Query: 661 HRCIFSQSGTELHVVSSS 714
H +FSQ ++ VSS+
Sbjct: 602 HC*VFSQICGSVNHVSST 549
Score = 40.0 bits (81), Expect(4) = 2e-050
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAV GTLNVL SCKK K V+ +S ++
Sbjct: 406 KAELLDPAVKGTLNVLGSCKKASITKVVITSSMAA 510
Score = 33.1 bits (66), Expect(4) = 2e-050
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 467 GYVHIDDVASSHILVYEAPQA 405
G+V++ DVA +HIL YE P A
Sbjct: 790 GWVNVKDVALAHILAYEIPSA 852
Score = 29.9 bits (59), Expect(4) = 7e-031
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -1
Query: 400 PAAWGASYTRMWLLATSSMWTYPIL 474
P A G SY R+W ATS T+P L
Sbjct: 857 PFAEGISYARIWARATSLTLTHPKL 783
Score = 29.0 bits (57), Expect(4) = 7e-031
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 802 FLHDLSTFRVPFTAGTSVSSL 864
FLH+ T VP TAG+S S+L
Sbjct: 467 FLHEPRTLSVPLTAGSSNSAL 405
>gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylase subunit SH2,
transcriptional regulator, NADPH-dependent reductase A1-a
and NADPH-dependent reductase A1-b genes, complete cds
Length = 42446
Score = 90.9 bits (192), Expect(4) = 4e-047
Identities = 39/105 (37%), Positives = 63/105 (60%)
Frame = -1 / +3
Query: 605 NGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHIL 426
+G++LVT++ + V+GP LS + + L L G+ A +S ++ +VH+DD+ +HI
Sbjct: 40452 HGMELVTIITTLVVGPFLSTGMPPSMITRLALVTGNEAHYSILKQVQFVHLDDLCDAHIF 40631
Query: 425 VYEAPQAAGRYLCSSVVLDNDELVSSLAKRYPIFPIPRRLNSPYG 291
++E P AAGRY+CSS +L + L RYP + IP R + G
Sbjct: 40632 LFEHPAAAGRYVCSSCDTTIHDLAAMLRDRYPEYDIPERFPAGTG 40766
Score = 73.0 bits (153), Expect(4) = 4e-047
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = -1 / +2
Query: 1046 VRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPV 888
VR P N KT L LPGA ERL + +ADL +EGSFD A+ C GVFH A+P+
Sbjct: 28640 VRSPANVVKTKPLLDLPGATERLSLWKADLADEGSFDDAIRGCTGVFHVATPM 28798
Score = 68.9 bits (144), Expect(3) = 3e-025
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = -1 / +1
Query: 1046 VRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPV 888
V P N KT L LPGA ERL + +ADL EGSFD A+ C GVFH A+P+
Sbjct: 39781 VHSPANVVKTKPLLDLPGATERLSLWKADLAVEGSFDDAIRGCTGVFHVATPM 39939
Score = 64.8 bits (135), Expect(3) = 3e-025
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = -1 / +2
Query: 1157 NSARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPG 1032
N + KG V VTGASGFV SWL+ +LL++GY V TVRDPG
Sbjct: 39524 NGGASVKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPG 39649
Score = 61.6 bits (128), Expect(4) = 4e-047
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = -1 / +2
Query: 1139 KGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPG 1032
KG V VTGASGF+ SWL+ +LL++GY V TVRDPG
Sbjct: 28400 KGPVVVTGASGFLGSWLVMKLLQAGYTVRATVRDPG 28507
Score = 44.6 bits (91), Expect(4) = 4e-047
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = -1 / +2
Query: 911 VFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ H +P+ S+ + + P V G ++++R+CK+ ++R+V TSS+ V I +
Sbjct: 28868 ILHDPTPLHLHGCRPSQNEVIKPTVEGMMSIMRACKEAGTVRRIVFTSSAGTVNIEE 29038
Score = 37.7 bits (76), Expect(3) = 3e-025
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G ++++R+CK+ ++R+V TSS+ I +
Sbjct: 40048 QNEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTCNIEE 40170
>gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw10a10 5', DNA sequence
Length = 728
Score = 114 bits (243), Expect(2) = 7e-027
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = -1 / +2
Query: 1034 GNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKED 855
GNH+K HLW L GAKERLQ+VRADLLEEGSFD AVMACEGVFHTASPV+ K DS + E
Sbjct: 248 GNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVITKSDSKACET 427
Query: 854 TLV 846
++
Sbjct: 428 PIL 436
Score = 86.3 bits (182), Expect(4) = 3e-046
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -1 / +1
Query: 1139 KGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPG 1032
+GKVCVTGASGF+ASWLIKRLLESGYHV+GTVRDPG
Sbjct: 10 EGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPG 117
Score = 85.8 bits (181), Expect(3) = 4e-046
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = +1 / -3
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FP 1035
+ES L TGDAVW TPSQAITA SKLPSS RSA T CSLS AP QR F *FP
Sbjct: 414 LESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FP 247
Score = 84.9 bits (179), Expect(4) = 3e-046
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = -1 / +2
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDE 705
D+T +E+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDE
Sbjct: 521 DATLQEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDE 691
Score = 73.9 bits (155), Expect(3) = 4e-046
Identities = 36/57 (63%), Positives = 39/57 (68%)
Frame = +1 / -3
Query: 706 SSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLVES 876
SSS L SSLILT DEDVRTTL R+GFFLH+ TFRVPF A S+SS V S
Sbjct: 690 SSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSISSCKVAS 520
Score = 70.3 bits (147), Expect(3) = 4e-046
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1 / -1
Query: 1033 PGSLTVPTT*YPDSRSRLISQEATKPEAPVTHTLP 1137
PGSLTVP T YPDSRSRL+SQEA KP+APVT TLP
Sbjct: 116 PGSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTLP 12
Score = 56.1 bits (116), Expect(4) = 3e-046
Identities = 27/51 (52%), Positives = 32/51 (62%)
Frame = -2 / +3
Query: 1030 ITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPSSLN 878
IT++ T G + A +RGC EL W+KGA T *W VR STLH SSLN
Sbjct: 252 ITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSSLN 404
Score = 31.3 bits (62), Expect(2) = 7e-027
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 1098 LLAYQTAPRVWISCGRDCQGPR 1033
LLA+Q A VW+ C R+ Q PR
Sbjct: 51 LLAHQAAS*VWVPCPRNSQRPR 116
Score = 22.1 bits (42), Expect(4) = 3e-046
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1 / +1
Query: 704 TTWSSVPLCEKM 669
T+WSS+ CE +
Sbjct: 691 TSWSSIEYCESL 726
>gb|CL154458.1|CL154458 104_339_10781423_114_31371_287 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781423, DNA
sequence
Length = 727
Score = 104 bits (222), Expect(3) = 2e-040
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1 / -2
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTW 696
D+T +E+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+W
Sbjct: 537 DATLQEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSW 358
Query: 695 SSVPLCEKMHL 663
SS+ CE + +
Sbjct: 357 SSIEYCESLQV 325
Score = 88.6 bits (187), Expect(3) = 3e-046
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / +2
Query: 502 PWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAYH 663
PWN+PRTSEAV SS D+LGPIT GRTVTRS+ SLANS AAFSA A AYH
Sbjct: 56 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYH 217
Score = 84.9 bits (179), Expect(3) = 3e-046
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = +1 / +2
Query: 676 SQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSV 855
SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+ TFRVPF A S+
Sbjct: 338 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSI 517
Query: 856 SSLLVES 876
SS V S
Sbjct: 518 SSCKVAS 538
Score = 69.8 bits (146), Expect(3) = 2e-040
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -1 / -2
Query: 665 LWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQG 501
+WYA+ E+ IDLVTVLP+FVIGP+LS EL TASDVLGLFQG
Sbjct: 219 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 55
Score = 52.4 bits (108), Expect(3) = 3e-046
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPS 951
+ES L TGDAVW TPSQAITA SKLPS
Sbjct: 644 LESDLVMTGDAVWKTPSQAITASSKLPS 727
Score = 32.2 bits (64), Expect(3) = 2e-040
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 949 KGASTAP*WPVRVYSTLHPPSSLN 878
KGA T *W VR STLH SSLN
Sbjct: 725 KGALTTL*WLVRASSTLHLLSSLN 654
>gb|CW498402.1|CW498402 fsbb001f291j19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f291j19, DNA
sequence
Length = 649
Score = 114 bits (243), Expect(2) = 2e-043
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = -1 / -2
Query: 1034 GNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKED 855
GNH+K HLW L GAKERLQ+VRADLLEEGSFD AVMACEGVFHTASPV+ K DS + E
Sbjct: 303 GNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVITKSDSKACET 124
Query: 854 TLV 846
++
Sbjct: 123 PIL 115
Score = 86.8 bits (183), Expect(2) = 2e-043
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -1 / -2
Query: 1139 KGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPG 1032
+GKVCVTGASGF+ASWLIKRLLESGYHV+GTVRDPG
Sbjct: 540 RGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPG 433
Score = 85.8 bits (181), Expect(2) = 1e-030
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = +1 / +2
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FP 1035
+ES L TGDAVW TPSQAITA SKLPSS RSA T CSLS AP QR F *FP
Sbjct: 137 LESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FP 304
Score = 72.1 bits (151), Expect(2) = 1e-030
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +1 / +2
Query: 1033 PGSLTVPTT*YPDSRSRLISQEATKPEAPVTHTLPL 1140
PGSLTVP T YPDSRSRL+SQEA KP+APVT TLPL
Sbjct: 434 PGSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTLPL 541
>gb|CW044896.1|CW044896 104_281_10509231_114_30238 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509231, DNA
sequence
Length = 614
Score = 127 bits (271), Expect(3) = 3e-035
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +1 / +2
Query: 160 HRGHSSRCPWSLSDCTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLR 315
HRGHSSR PWSLSD TQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSL+
Sbjct: 293 HRGHSSRWPWSLSDWTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLQ 448
Score = 126 bits (269), Expect(3) = 2e-039
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = -1 / -3
Query: 311 RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL* 159
RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL*
Sbjct: 444 RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL* 292
Score = 102 bits (217), Expect(3) = 2e-030
Identities = 44/51 (86%), Positives = 45/51 (88%)
Frame = -3 / -2
Query: 312 EAEQPLRQAVVPAEHVEAAGAGLQVQRGAGDVRRLRTVAQRPGTPAGVPPV 160
+ EQPLRQAVVPAEHVEAAGAGLQVQ AGDVRRL VAQRPG PAGVPPV
Sbjct: 445 QTEQPLRQAVVPAEHVEAAGAGLQVQGSAGDVRRLCPVAQRPGPPAGVPPV 293
Score = 39.1 bits (79), Expect(3) = 2e-039
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1 / -2
Query: 356 VSSLAKRYPIFPIPRRL 306
VS LAKRYP+FPIPRRL
Sbjct: 571 VSLLAKRYPVFPIPRRL 521
Score = 37.7 bits (76), Expect(3) = 2e-039
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 400 GGTCAAQWCWTTTS 359
G TCAA WCWTTTS
Sbjct: 614 GDTCAAPWCWTTTS 573
Score = 35.9 bits (72), Expect(3) = 2e-030
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -3
Query: 398 RYLCSSVVLDNDEL 357
RYLCSSVVLDNDEL
Sbjct: 612 RYLCSSVVLDNDEL 571
Score = 35.0 bits (70), Expect(3) = 3e-035
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 309 PPGYGEYRVAFRERGD 356
PPGYGEY V+ RE+GD
Sbjct: 524 PPGYGEYWVSLREQGD 571
Score = 34.1 bits (68), Expect(3) = 2e-030
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 354 LLARETLPDIPHTPEAEQ 301
LLARE +P IPHTPE +
Sbjct: 569 LLAREAIPSIPHTPEVSR 516
Score = 26.7 bits (52), Expect(3) = 3e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 41 SARGHRDMTWNY*RK 85
S+R DMTWNY* K
Sbjct: 151 SSRKDADMTWNY*NK 195
>gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_6_A05_A002
5', mRNA sequence
Length = 782
Score = 81.7 bits (172), Expect(4) = 2e-038
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1 / +2
Query: 1070 SGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASP 891
+G V TVRD + +KT HL L GAK+RL + +A LLEEGSFD+AV C+ VFHTASP
Sbjct: 128 AGKVVCATVRDTADPKKTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 307
Score = 62.5 bits (130), Expect(4) = 2e-038
Identities = 28/95 (29%), Positives = 48/95 (50%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A ++ ++ +++DET ++ +CEK WY L +NG
Sbjct: 410 VVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNG 589
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDT 495
++VT+ P+ VIGP L L +A +L L G +
Sbjct: 590 FEIVTINPAMVIGPLLQPTLNTSAEAILKLINGSS 694
Score = 57.9 bits (120), Expect(4) = 7e-023
Identities = 31/59 (52%), Positives = 35/59 (59%)
Frame = +1 / -3
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YP 1068
G+AVWNT S TA SK PSS+R A CSLSLAP R VF+ S TV T +P
Sbjct: 306 GEAVWNTVSHP*TAASKEPSSSRLALNKCSLSLAPSRAVRCNVFFGSAVSRTVAHTTFP 130
Score = 49.2 bits (101), Expect(4) = 7e-023
Identities = 31/78 (39%), Positives = 39/78 (50%)
Frame = +1 / -3
Query: 481 ELNLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
EL P R + A+ S GPIT G VT S P SL N AA SA+ L + Y
Sbjct: 708 ELGYVDDPLINFRIASALVFSVGWSRGPITIAGFIVTISNPLSLENFQAACSASVLDKTY 529
Query: 661 HRCIFSQSGTELHVVSSS 714
H +FSQ ++ VSS+
Sbjct: 528 HC*VFSQICGSVNHVSST 475
Score = 40.0 bits (81), Expect(4) = 2e-038
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAV GTLNVL SCKK K V+ +S ++
Sbjct: 332 KAELLDPAVKGTLNVLGSCKKASITKVVITSSMAA 436
Score = 33.1 bits (66), Expect(4) = 2e-038
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 467 GYVHIDDVASSHILVYEAPQA 405
G+V++ DVA +HIL YE P A
Sbjct: 716 GWVNVKDVALAHILAYEIPSA 778
Score = 29.0 bits (57), Expect(4) = 7e-023
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 802 FLHDLSTFRVPFTAGTSVSSL 864
FLH+ T VP TAG+S S+L
Sbjct: 393 FLHEPRTLSVPLTAGSSNSAL 331
Score = 27.6 bits (54), Expect(4) = 7e-023
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1 / -3
Query: 406 AWGASYTRMWLLATSSMWTYPIL 474
A G SY R+W ATS T+P L
Sbjct: 777 AEGISYARIWARATSLTLTHPKL 709
>gb|BI351507.1|BI351507 IP1_72_F10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 441
Score = 160 bits (343), Expect = 5e-038
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1 / +2
Query: 362 ELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQG 183
ELVS L KRYP+FPIPRRLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQG
Sbjct: 2 ELVSLLVKRYPVFPIPRRLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQG 181
Query: 182 HLLECPL 162
HLLECPL
Sbjct: 182 HLLECPL 202
Score = 146 bits (313), Expect(2) = 6e-036
Identities = 58/64 (90%), Positives = 59/64 (92%)
Frame = +1 / -1
Query: 151 IAVHRGHSSRCPWSLSDCTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLRGMGNI 330
I +HRGHSSR PWSLSD TQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLRGMGN
Sbjct: 213 IFMHRGHSSRWPWSLSDWTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLRGMGNT 34
Query: 331 G*RF 342
G RF
Sbjct: 33 GYRF 22
Score = 140 bits (300), Expect = 4e-032
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = -3 / +1
Query: 363 RAGLLARETLPDIPHTPEAEQPLRQAVVPAEHVEAAGAGLQVQRGAGDVRRLRTVAQRPG 184
RAGLLARE +P IPHTPE EQPLRQAVVPAEHVEAAGAGLQVQ AGDVRRL VAQRPG
Sbjct: 1 RAGLLAREAIPSIPHTPETEQPLRQAVVPAEHVEAAGAGLQVQGSAGDVRRLCPVAQRPG 180
Query: 183 TPAGVPPVNCD 151
PAGVPPV+ D
Sbjct: 181 PPAGVPPVHED 213
Score = 26.7 bits (52), Expect(2) = 6e-036
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 41 SARGHRDMTWNY*RK 85
S+R DMTWNY* K
Sbjct: 347 SSRKDADMTWNY*NK 303
>gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_F11_A002 5', mRNA sequence
Length = 773
Score = 62.5 bits (130), Expect(4) = 2e-037
Identities = 28/95 (29%), Positives = 48/95 (50%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A ++ ++ +++DET ++ +CEK WY L +NG
Sbjct: 466 VVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNG 645
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDT 495
++VT+ P+ VIGP L L +A +L L G +
Sbjct: 646 FEIVTINPAMVIGPLLQPTLNTSAEAILKLINGSS 750
Score = 56.5 bits (117), Expect(4) = 2e-037
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -1 / +1
Query: 989 KERLQIVRADLLEEGSFDSAVMACEGVFHTASP 891
K+RL + +A LLEEGSFD+AV C+ VFHTASP
Sbjct: 265 KDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 363
Score = 54.7 bits (113), Expect(4) = 2e-037
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRD 1038
VCVTGASG++ASW+++ LL+ GY V TVRD
Sbjct: 161 VCVTGASGYIASWIVRLLLDRGYTVRATVRD 253
Score = 49.2 bits (101), Expect(4) = 2e-022
Identities = 31/78 (39%), Positives = 39/78 (50%)
Frame = +1 / -1
Query: 481 ELNLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
EL P R + A+ S GPIT G VT S P SL N AA SA+ L + Y
Sbjct: 764 ELGYVDDPLINFRIASALVFSVGWSRGPITIAGFIVTISNPLSLENFQAACSASVLDKTY 585
Query: 661 HRCIFSQSGTELHVVSSS 714
H +FSQ ++ VSS+
Sbjct: 584 HC*VFSQICGSVNHVSST 531
Score = 47.3 bits (97), Expect(4) = 2e-022
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +1 / -1
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRW 1014
G+AVWNT S TA SK PSS+R A CSLSL RW
Sbjct: 362 GEAVWNTVSHP*TAASKEPSSSRLALNKCSLSLGQRCPARW 240
Score = 40.0 bits (81), Expect(4) = 2e-037
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAV GTLNVL SCKK K V+ +S ++
Sbjct: 388 KAELLDPAVKGTLNVLGSCKKASITKVVITSSMAA 492
Score = 36.8 bits (74), Expect(4) = 2e-022
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1 / -3
Query: 1039 SLTVPTT*YPDSRSRLISQEATKPEAPVTHT 1131
S TV T P SRS L Q+A P+APVTHT
Sbjct: 252 SRTVARTV*PRSRSSLTIQDAMYPDAPVTHT 160
Score = 29.0 bits (57), Expect(4) = 2e-022
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 802 FLHDLSTFRVPFTAGTSVSSL 864
FLH+ T VP TAG+S S+L
Sbjct: 449 FLHEPRTLSVPLTAGSSNSAL 387
>gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_H04_A007 5', mRNA sequence
Length = 659
Score = 122 bits (260), Expect(3) = 3e-037
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASW+++ LL+ GY V TVRD + +KT HL L GAK+RL + +A LLE
Sbjct: 153 VCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPKKTLHLTALDGAKDRLHLFKASLLE 332
Query: 950 EGSFDSAVMACEGVFHTASP 891
EGSFD+AV C+ VFHTASP
Sbjct: 333 EGSFDAAVHGCDTVFHTASP 392
Score = 83.1 bits (175), Expect(3) = 8e-021
Identities = 44/80 (55%), Positives = 49/80 (61%)
Frame = +1 / -2
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G+AVWNT S TA SK PSS+R A CSLSLAP R VF+ S TV T P
Sbjct: 391 GEAVWNTVSHP*TAASKEPSSSRLALNKCSLSLAPSRAVRCNVFFGSAVSRTVARTV*PR 212
Query: 1072 SRSRLISQEATKPEAPVTHT 1131
SRS L Q+A P+APVTHT
Sbjct: 211 SRSSLTIQDAMYPDAPVTHT 152
Score = 40.0 bits (81), Expect(3) = 3e-037
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAV GTLNVL SCKK K V+ +S ++
Sbjct: 417 KAELLDPAVKGTLNVLGSCKKASITKVVITSSMAA 521
Score = 33.6 bits (67), Expect(3) = 3e-037
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -1 / +3
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYAL 651
V+ +SS A ++ ++ +++DET ++ +CEK WY L
Sbjct: 495 VVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVL 623
Score = 29.0 bits (57), Expect(3) = 8e-021
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 802 FLHDLSTFRVPFTAGTSVSSL 864
FLH+ T VP TAG+S S+L
Sbjct: 478 FLHEPRTLSVPLTAGSSNSAL 416
Score = 27.6 bits (54), Expect(3) = 8e-021
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1 / -2
Query: 616 NSHAAFSANTLARAYHRCIFSQSGTELHVVSSS 714
N AA SA+ L + YH +FSQ ++ VSS+
Sbjct: 658 NFQAACSASVLDKTYHC*VFSQICGSVNHVSST 560
>gb|CW446802.1|CW446802 fsbb001f179k03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179k03, DNA
sequence
Length = 712
Score = 104 bits (222), Expect(2) = 2e-036
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1 / +1
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTW 696
D+T +E+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+W
Sbjct: 142 DATLQEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSW 321
Query: 695 SSVPLCEKMHL 663
SS+ CE + +
Sbjct: 322 SSIEYCESLQV 354
Score = 88.6 bits (187), Expect(2) = 5e-036
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / -3
Query: 502 PWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAYH 663
PWN+PRTSEAV SS D+LGPIT GRTVTRS+ SLANS AAFSA A AYH
Sbjct: 623 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYH 462
Score = 84.9 bits (179), Expect(2) = 5e-036
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = +1 / -3
Query: 676 SQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSV 855
SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+ TFRVPF A S+
Sbjct: 341 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSI 162
Query: 856 SSLLVES 876
SS V S
Sbjct: 161 SSCKVAS 141
Score = 69.8 bits (146), Expect(2) = 2e-036
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -1 / +1
Query: 665 LWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQG 501
+WYA+ E+ IDLVTVLP+FVIGP+LS EL TASDVLGLFQG
Sbjct: 460 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 624
>gb|CW055082.1|CW055082 104_296_10516884_114_30174 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516884, DNA
sequence
Length = 576
Score = 104 bits (222), Expect(2) = 2e-036
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1 / +3
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTW 696
D+T +E+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+W
Sbjct: 12 DATLQEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSW 191
Query: 695 SSVPLCEKMHL 663
SS+ CE + +
Sbjct: 192 SSIEYCESLQV 224
Score = 88.6 bits (187), Expect(2) = 5e-036
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / -3
Query: 502 PWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAYH 663
PWN+PRTSEAV SS D+LGPIT GRTVTRS+ SLANS AAFSA A AYH
Sbjct: 493 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYH 332
Score = 84.9 bits (179), Expect(2) = 5e-036
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = +1 / -3
Query: 676 SQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSV 855
SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+ TFRVPF A S+
Sbjct: 211 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSI 32
Query: 856 SSLLVES 876
SS V S
Sbjct: 31 SSCKVAS 11
Score = 69.8 bits (146), Expect(2) = 2e-036
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -1 / +3
Query: 665 LWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQG 501
+WYA+ E+ IDLVTVLP+FVIGP+LS EL TASDVLGLFQG
Sbjct: 330 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 494
>gb|CW501374.1|CW501374 fsbb001f297c11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f297c11, DNA
sequence
Length = 657
Score = 114 bits (243), Expect(2) = 8e-026
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = -1 / -3
Query: 1034 GNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKED 855
GNH+K HLW L GAKERLQ+VRADLLEEGSFD AVMACEGVFHTASPV+ K DS + E
Sbjct: 508 GNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVITKSDSKACET 329
Query: 854 TLV 846
++
Sbjct: 328 PIL 320
Score = 104 bits (222), Expect(2) = 3e-032
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1 / -3
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTW 696
D+T +E+ L A+NGTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+W
Sbjct: 235 DATLQEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSW 56
Query: 695 SSVPLCEKMHL 663
SS+ CE + +
Sbjct: 55 SSIEYCESLQV 23
Score = 85.8 bits (181), Expect(2) = 3e-035
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = +1 / +3
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FP 1035
+ES L TGDAVW TPSQAITA SKLPSS RSA T CSLS AP QR F *FP
Sbjct: 342 LESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FP 509
Score = 84.9 bits (179), Expect(2) = 3e-035
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = +1 / +3
Query: 676 SQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSV 855
SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+ TFRVPF A S+
Sbjct: 36 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSI 215
Query: 856 SSLLVES 876
SS V S
Sbjct: 216 SSCKVAS 236
Score = 56.1 bits (116), Expect(2) = 3e-032
Identities = 27/51 (52%), Positives = 32/51 (62%)
Frame = -2 / -1
Query: 1030 ITKRQPTFGNYLALKRGCKSCELICWKKGASTAP*WPVRVYSTLHPPSSLN 878
IT++ T G + A +RGC EL W+KGA T *W VR STLH SSLN
Sbjct: 504 ITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSSLN 352
Score = 27.6 bits (54), Expect(2) = 8e-026
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 727 PVTSRWTKRHGAPCHSAR 674
P+T W K HGAP +A+
Sbjct: 87 PLTCCWMKHHGAPLSTAK 34
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 101 bits (216), Expect(3) = 6e-033
Identities = 45/81 (55%), Positives = 54/81 (66%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGA GFVASWL++RLL G +VV K AHL + GA RL++ RADLL+
Sbjct: 72 VCVTGAGGFVASWLVERLLAGGRYVVHGTVRDPGDAKNAHLAAMDGAAARLRLFRADLLD 251
Query: 950 EGSFDSAVMACEGVFHTASPV 888
GS +AV C+GVFH ASPV
Sbjct: 252 YGSVAAAVAGCDGVFHVASPV 314
Score = 51.0 bits (105), Expect(3) = 6e-033
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -1 / +3
Query: 764 SSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVT 585
SS + + G + +DE WS V C WY L G+D+V+
Sbjct: 432 SSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVS 611
Query: 584 VLPSFVIGP 558
V PS VIGP
Sbjct: 612 VCPSLVIGP 638
Score = 28.1 bits (55), Expect(3) = 6e-033
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1 / +3
Query: 878 PDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAV 753
P + + L PAV GT+NVL++ + VV++S ++ +
Sbjct: 327 PIGDPEVELLAPAVTGTMNVLKASSEAKVKGVVVVSSVAAVM 452
>gb|CD234981.1|CD234981 SS1_19_A07.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_19_A07_A012 5', mRNA sequence
Length = 565
Score = 127 bits (271), Expect(3) = 2e-032
Identities = 53/86 (61%), Positives = 63/86 (73%)
Frame = -1 / +1
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+KG V VTGASGFV SWL+ +LL++GY V TVRDP N KT L LPGA ERL I +
Sbjct: 91 AAKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANAAKTKPLLDLPGATERLSIWK 270
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPV 888
ADL E+GSFD A+ C GVFH A+P+
Sbjct: 271 ADLAEDGSFDDAIRGCTGVFHVATPL 348
Score = 28.1 bits (55), Expect(3) = 2e-032
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3 / +2
Query: 198 AQRPGTPAGVPPVNCDGVPPPVNA 127
A+RP TPA P +PPP A
Sbjct: 425 ARRPPTPAAAPCAASSSLPPPGRA 496
Score = 28.1 bits (55), Expect(3) = 2e-032
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKK 801
+ + + PAV G +++LR+CK+
Sbjct: 370 ENEVIKPAVEGVISILRACKE 432
>gb|CW464926.1|CW464926 fsbb001f215g22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215g22, DNA
sequence
Length = 613
Score = 90.9 bits (192), Expect(2) = 3e-032
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = -1 / +1
Query: 833 GTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHL 663
GTLNVLRSCKKNP L+RVVLTSSS+ VRI+D+ N+ LDET+WSS+ CE + +
Sbjct: 1 GTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWSSIEYCESLQV 171
Score = 88.6 bits (187), Expect(2) = 1e-031
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / -3
Query: 502 PWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAYH 663
PWN+PRTSEAV SS D+LGPIT GRTVTRS+ SLANS AAFSA A AYH
Sbjct: 440 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYH 279
Score = 70.3 bits (147), Expect(2) = 1e-031
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +1 / -3
Query: 676 SQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFFLHDLSTFRV 831
SQ ELH VSSS L SSLILT DEDVRTTL R+GFFLH+ TFRV
Sbjct: 158 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRV 3
Score = 69.8 bits (146), Expect(2) = 3e-032
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -1 / +1
Query: 665 LWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQG 501
+WYA+ E+ IDLVTVLP+FVIGP+LS EL TASDVLGLFQG
Sbjct: 277 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 441
>gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 503
Score = 122 bits (260), Expect(2) = 3e-032
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASW+++ LL+ GY V TVRD + +KT HL L GAK+RL + +A LLE
Sbjct: 132 VCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPKKTLHLTALDGAKDRLHLFKASLLE 311
Query: 950 EGSFDSAVMACEGVFHTASP 891
EGSFD+AV C+ VFHTASP
Sbjct: 312 EGSFDAAVHGCDTVFHTASP 371
Score = 38.6 bits (78), Expect(2) = 3e-032
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAV GTLNVL SCK+ K V+ +S ++
Sbjct: 396 KAELLDPAVKGTLNVLGSCKRASITKVVITSSMAA 500
>gb|CW344753.1|CW344753 104_847_11488123_116_36201_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488123, DNA
sequence
Length = 607
Score = 128 bits (274), Expect(3) = 5e-032
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -1 / +3
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+KG V VTGASGFV SWL+ +LL++GY V TVRDP N KT L LPGA ERL I +
Sbjct: 90 AAKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANAAKTKPLLDLPGATERLSIWK 269
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPV 888
ADL EEGSFD A+ C GVFH A+P+
Sbjct: 270 ADLAEEGSFDDAIRGCTGVFHVATPL 347
Score = 28.1 bits (55), Expect(3) = 5e-032
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKK 801
+ + + PAV G +++LR+CK+
Sbjct: 369 ENEVIKPAVEGVISILRACKE 431
Score = 25.4 bits (49), Expect(3) = 5e-032
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3 / +1
Query: 198 AQRPGTPAGVPPVNCDGVPPPVNA 127
A+RP PA P +PPP A
Sbjct: 424 ARRPPPPAAAPCAASSSLPPPGRA 495
>gb|CW307337.1|CW307337 104_795_11468086_148_36060_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468086, DNA
sequence
Length = 633
Score = 128 bits (274), Expect(3) = 5e-032
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -1 / -2
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+KG V VTGASGFV SWL+ +LL++GY V TVRDP N KT L LPGA ERL I +
Sbjct: 533 AAKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANAAKTKPLLDLPGATERLSIWK 354
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPV 888
ADL EEGSFD A+ C GVFH A+P+
Sbjct: 353 ADLAEEGSFDDAIRGCTGVFHVATPL 276
Score = 28.1 bits (55), Expect(3) = 5e-032
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1 / -2
Query: 863 KEDTLVPAVNGTLNVLRSCKK 801
+ + + PAV G +++LR+CK+
Sbjct: 254 ENEVIKPAVEGVISILRACKE 192
Score = 25.4 bits (49), Expect(3) = 5e-032
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3 / -3
Query: 198 AQRPGTPAGVPPVNCDGVPPPVNA 127
A+RP PA P +PPP A
Sbjct: 199 ARRPPPPAAAPCAASSSLPPPGRA 128
>gb|CW446801.1|CW446801 fsbb001f179k03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179k03, DNA
sequence
Length = 651
Score = 123 bits (263), Expect(2) = 6e-032
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -1 / -2
Query: 548 HELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLD 369
+E + + G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL
Sbjct: 542 YERVANETHAASVVAGETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLC 363
Query: 368 NDELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLG 246
+LV+ LA+R+P +PIPR L S YG+Q+Y +TSK + LG
Sbjct: 362 CGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALG 240
Score = 36.3 bits (73), Expect(2) = 6e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 227 KGVEEMFDDAVDSLRGHGHL 168
>gb|BZ331520.1|BZ331520 hw10a10.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw10a10 5', DNA sequence
Length = 635
Score = 123 bits (263), Expect(2) = 6e-032
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 548 HELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLD 369
+E + + G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL
Sbjct: 576 YERVANETHAASVVAGETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLC 397
Query: 368 NDELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLG 246
+LV+ LA+R+P +PIPR L S YG+Q+Y +TSK + LG
Sbjct: 396 CGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALG 274
Score = 36.3 bits (73), Expect(2) = 6e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / -3
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 261 KGVEEMFDDAVDSLRGHGHL 202
>gb|CW146117.1|CW146117 104_538_11138820_116_34979_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138820, DNA
sequence
Length = 611
Score = 123 bits (263), Expect(2) = 6e-032
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -1 / -1
Query: 548 HELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLD 369
+E + + G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL
Sbjct: 521 YERVANETHAASVVAGETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLC 342
Query: 368 NDELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLG 246
+LV+ LA+R+P +PIPR L S YG+Q+Y +TSK + LG
Sbjct: 341 CGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALG 219
Score = 36.3 bits (73), Expect(2) = 6e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 206 KGVEEMFDDAVDSLRGHGHL 147
>gb|CW072227.1|CW072227 104_325_10592141_114_30537 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592141, DNA
sequence
Length = 604
Score = 123 bits (263), Expect(2) = 6e-032
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -1 / +3
Query: 548 HELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLD 369
+E + + G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL
Sbjct: 102 YERVANETHAASVVAGETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLC 281
Query: 368 NDELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLG 246
+LV+ LA+R+P +PIPR L S YG+Q+Y +TSK + LG
Sbjct: 282 CGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALG 404
Score = 36.3 bits (73), Expect(2) = 6e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +3
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 417 KGVEEMFDDAVDSLRGHGHL 476
>gb|CL160198.1|CL160198 104_350_10804807_114_31822_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804807, DNA
sequence
Length = 588
Score = 123 bits (263), Expect(2) = 6e-032
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -1 / -2
Query: 548 HELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLD 369
+E + + G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL
Sbjct: 413 YERVANETHAASVVAGETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLC 234
Query: 368 NDELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLG 246
+LV+ LA+R+P +PIPR L S YG+Q+Y +TSK + LG
Sbjct: 233 CGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALG 111
Score = 36.3 bits (73), Expect(2) = 6e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 98 KGVEEMFDDAVDSLRGHGHL 39
>gb|CW128866.1|CW128866 104_510_11114251_116_34758_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114251, DNA
sequence
Length = 563
Score = 123 bits (263), Expect(2) = 6e-032
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -1 / +1
Query: 548 HELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLD 369
+E + + G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL
Sbjct: 187 YERVANETHAASVVAGETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLC 366
Query: 368 NDELVSSLAKRYPIFPIPRRLNSPYGKQSYQLNTSKLQGLG 246
+LV+ LA+R+P +PIPR L S YG+Q+Y +TSK + LG
Sbjct: 367 CGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALG 489
Score = 36.3 bits (73), Expect(2) = 6e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +1
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 502 KGVEEMFDDAVDSLRGHGHL 561
>gb|CW464925.1|CW464925 fsbb001f215g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215g22, DNA
sequence
Length = 505
Score = 122 bits (262), Expect(2) = 8e-032
Identities = 49/86 (56%), Positives = 65/86 (75%)
Frame = -1 / -2
Query: 503 GDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLDNDELVSSLAKRYPIF 324
G+T +F+ YGRMGYVHIDDVA HIL YE+ A GRY+C++ VL +LV+ LA+R+P +
Sbjct: 504 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 325
Query: 323 PIPRRLNSPYGKQSYQLNTSKLQGLG 246
PIPR L S YG+Q+Y +TSK + LG
Sbjct: 324 PIPRSLPSVYGEQTYGFDTSKARALG 247
Score = 36.3 bits (73), Expect(2) = 8e-032
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 236 RGVQEMFDDCVQSLKDQGHL 177
+GV+EMFDD V SL+ GHL
Sbjct: 234 KGVEEMFDDAVDSLRGHGHL 175
>gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_B03_A002 5', mRNA sequence
Length = 737
Score = 114 bits (244), Expect(2) = 3e-031
Identities = 52/126 (41%), Positives = 76/126 (60%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTG SGF+ SWL++ LL GY V TV++ + +T HL + GA RL++ + DLLE
Sbjct: 89 VCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQDESETKHLQAMDGANSRLRLFQMDLLE 268
Query: 950 EGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLT 771
S AV GVFH ASPV+ + + + PA+ GTL+VLR+ K + V+++
Sbjct: 269 PASIRPAVEGARGVFHVASPVILHRAQDPENELVEPALKGTLSVLRAAKDCGVGRVVMVS 448
Query: 770 SSSSAV 753
S ++ V
Sbjct: 449 SQTAMV 466
Score = 42.8 bits (87), Expect(2) = 3e-031
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -1 / +2
Query: 713 LDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCV 534
+DE +W+ + +K+ LWY + + G++ V + P+ V+GP+L+ +
Sbjct: 497 VDEDSWADIEQLKKLQLWYNVSKTLAEKAAWDFAEKEGLEPVVLNPALVLGPTLTPNIMA 676
Query: 533 TASDVLGLFQG 501
+ L + G
Sbjct: 677 SLQMFLQIMGG 709
>gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A10_A002 5', mRNA sequence
Length = 681
Score = 66.1 bits (138), Expect(4) = 3e-031
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 1022 KTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPVLAKPD 873
K AHL LPGA ERL + +ADLL+ + +A+ C GVFHTASPV P+
Sbjct: 315 KNAHLRALPGATERLALCKADLLDYDTLRAAIAGCHGVFHTASPVTDDPE 464
Score = 58.8 bits (122), Expect(4) = 3e-031
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -1 / +3
Query: 1154 SARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDP 1035
+ R VCVTGA G+V SW++K LLE GY V GTVR+P
Sbjct: 186 AGRGQTTTVCVTGAGGYVGSWIVKLLLERGYAVRGTVRNP 305
Score = 35.4 bits (71), Expect(4) = 3e-031
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1 / +3
Query: 884 AKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAV 753
A P + E+ + PAV GT ++ + + ++RVVLTSS AV
Sbjct: 438 ASPVTDDPEEMVEPAVTGTRYIIDAAAEAGTVRRVVLTSSIGAV 569
Score = 32.2 bits (64), Expect(4) = 3e-031
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1 / +3
Query: 767 SSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWY 657
+SS + D +S + +DE+ WS + C+K WY
Sbjct: 549 TSSIGAVAMDPNRSPDAVVDESCWSDLDFCKKTKNWY 659
>gb|CW477732.1|CW477732 fsbb001f235d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f235d13, DNA
sequence
Length = 458
Score = 128 bits (274), Expect(2) = 1e-030
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -1 / -1
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+KG V VTGASGFV SWL+ +LL++GY V TVRDP N KT L LPGA ERL I +
Sbjct: 353 AAKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANAAKTKPLLDLPGATERLSIWK 174
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPV 888
ADL EEGSFD A+ C GVFH A+P+
Sbjct: 173 ADLAEEGSFDDAIRGCTGVFHVATPL 96
Score = 27.2 bits (53), Expect(2) = 1e-030
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 863 KEDTLVPAVNGTLNVLRSCKK 801
+ + + PAV G +++LR+C++
Sbjct: 74 ENEVIKPAVEGVISILRACRR 12
>gb|CL160199.1|CL160199 104_350_10804807_116_31823_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804807, DNA
sequence
Length = 729
Score = 88.6 bits (187), Expect(2) = 1e-030
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / -2
Query: 502 PWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSHAAFSANTLARAYH 663
PWN+PRTSEAV SS D+LGPIT GRTVTRS+ SLANS AAFSA A AYH
Sbjct: 260 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYH 99
Score = 69.3 bits (145), Expect(2) = 1e-030
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +1 / -2
Query: 394 YLPAAWGASYTRMWLLATSSMWTYPILPYELNLAVSP 504
YLP A SY RMW LATSSMWTYPILPY +NL VSP
Sbjct: 668 YLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 558
>gb|BI245710.1|BI245710 IP1_63_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 510
Score = 117 bits (251), Expect(3) = 2e-029
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = -1 / +3
Query: 1127 CVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEE 948
CVTG +GF+A+ LI+ LL +G+ V TVRDP + K LW+L GA ERLQ+VRADL+ E
Sbjct: 45 CVTGGTGFIAAHLIRALLAAGHSVRATVRDPEDEGKVGFLWELEGAGERLQLVRADLMVE 224
Query: 947 GSFDSAVMACEGVFHTASPVL 885
GSFD AV +GVFHTASPV+
Sbjct: 225 GSFDDAVSGVDGVFHTASPVV 287
Score = 29.5 bits (58), Expect(3) = 2e-029
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / +3
Query: 890 VLAKPDSTSKEDTLVPAVNGTLNVLRSCKK 801
V+ K + +E + P V G NVLRSC +
Sbjct: 288 VVGKDNKDVQETLVEPIVKGAANVLRSCAR 377
Score = 24.9 bits (48), Expect(3) = 2e-029
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = -2 / +1
Query: 427 WCTRPPRPPGGTCAAQWCWTTTSWSPRSRNAT 332
WC+ PP P T + T +P + + T
Sbjct: 409 WCSPPPAPASATATPPRSTSRTGPTPTTASRT 504
>gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 568
Score = 100 bits (212), Expect(3) = 4e-029
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = -1 / +1
Query: 1103 VASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEGSFDSAVM 924
V SWL+ +LL +GY V TVRDP N +KT L LPGA ERL + +ADL EGSFD A+
Sbjct: 1 VGSWLVMKLLHAGYTVRATVRDPANVEKTKPLLDLPGATERLSLWKADLAVEGSFDDAIR 180
Query: 923 ACEGVFHTASPV 888
C GVFH A+P+
Sbjct: 181 GCTGVFHVATPM 216
Score = 37.7 bits (76), Expect(3) = 4e-029
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G ++++++CK+ ++R+V TSS+ V + +
Sbjct: 238 ENEVIKPTVEGMISIMQACKEAGTVRRIVFTSSAGTVNVEE 360
Score = 34.1 bits (68), Expect(3) = 4e-029
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -1 / +1
Query: 605 NGIDLVTVLPSFVIGPSLS 549
+G+DL+TV+P+ V+GP LS
Sbjct: 493 HGVDLITVIPTLVVGPFLS 549
>gb|CW486985.1|CW486985 fsbb001f252j04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252j04, DNA
sequence
Length = 591
Score = 123 bits (263), Expect(2) = 4e-029
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = +1 / +2
Query: 160 HRGHSSRCPWSLSDCTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*GLFSLR 315
HRGHSSR PWSLSD TQSSNISCTPLNLKPSPCSFDVFSWYDCLP* LFSL+
Sbjct: 344 HRGHSSRWPWSLSDWTQSSNISCTPLNLKPSPCSFDVFSWYDCLP*RLFSLQ 499
Score = 121 bits (259), Expect = 2e-026
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1 / -1
Query: 311 RLNSPYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL* 159
RLNS YGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL*
Sbjct: 495 RLNSLYGKQSYQLNTSKLQGLGFKFRGVQEMFDDCVQSLKDQGHLLECPL* 343
Score = 104 bits (221), Expect = 3e-021
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = -3 / -3
Query: 312 EAEQPLRQAVVPAEHVEAAGAGLQVQRGAGDVRRLRTVAQRPGTPAGVPPV 160
+AEQPLRQAVVPAEHVEAAGAGLQVQ AGDVRRL VAQRPG PAGVPPV
Sbjct: 496 QAEQPLRQAVVPAEHVEAAGAGLQVQGSAGDVRRLCPVAQRPGPPAGVPPV 344
Score = 26.7 bits (52), Expect(2) = 4e-029
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 41 SARGHRDMTWNY*RK 85
S+R DMTWNY* K
Sbjct: 202 SSRKDADMTWNY*NK 246
>gb|CW307336.1|CW307336 104_795_11468086_116_36059_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468086, DNA
sequence
Length = 630
Score = 128 bits (274), Expect = 2e-028
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -1 / +2
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+KG V VTGASGFV SWL+ +LL++GY V TVRDP N KT L LPGA ERL I +
Sbjct: 359 AAKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANAAKTKPLLDLPGATERLSIWK 538
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPV 888
ADL EEGSFD A+ C GVFH A+P+
Sbjct: 539 ADLAEEGSFDDAIRGCTGVFHVATPL 616
>gb|CW307965.1|CW307965 104_796_11468420_116_35731_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468420, DNA
sequence
Length = 675
Score = 128 bits (274), Expect = 2e-028
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -1 / -3
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+KG V VTGASGFV SWL+ +LL++GY V TVRDP N KT L LPGA ERL I +
Sbjct: 334 AAKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANAAKTKPLLDLPGATERLSIWK 155
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPV 888
ADL EEGSFD A+ C GVFH A+P+
Sbjct: 154 ADLAEEGSFDDAIRGCTGVFHVATPL 77
>gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_B05_A002 5', mRNA sequence
Length = 737
Score = 114 bits (244), Expect(2) = 8e-028
Identities = 52/126 (41%), Positives = 76/126 (60%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTG SGF+ SWL++ LL GY V TV++ + +T HL + GA RL++ + DLLE
Sbjct: 121 VCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQDESETKHLQAMDGANSRLRLFQMDLLE 300
Query: 950 EGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLT 771
S AV GVFH ASPV+ + + + PA+ GTL+VLR+ K + V+++
Sbjct: 301 PASIRPAVEGARGVFHVASPVILHRAQDPENELVEPALKGTLSVLRAAKDCGVGRVVMVS 480
Query: 770 SSSSAV 753
S ++ V
Sbjct: 481 SQTAMV 498
Score = 34.1 bits (68), Expect(2) = 8e-028
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1 / +1
Query: 470 MGYVHIDDVASSHILVYEAPQAAGRYLC 387
+G V + DVA S I++YE A GR+LC
Sbjct: 610 IGCVDVRDVAQSLIVLYENTSAEGRHLC 693
>gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_B09_A002 5', mRNA sequence
Length = 566
Score = 122 bits (262), Expect = 8e-027
Identities = 55/113 (48%), Positives = 70/113 (61%)
Frame = -1 / +1
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A+ VCVTGA GF+ASWL+K LL G + V K AHL L GA ERLQ+++
Sbjct: 106 AAAKSVCVTGAGGFIASWLVKLLLSRGQYTVRGTVRDPGASKNAHLKALEGAMERLQLLK 285
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSC 807
DLL+ S SA+ CEGVFH ASPV + S + + + PAV GT NVL++C
Sbjct: 286 VDLLDYSSVASAIAGCEGVFHVASPVPSGRSSNPEVEVIGPAVLGTTNVLKAC 444
>gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_22_G02_A012 5', mRNA sequence
Length = 582
Score = 114 bits (244), Expect(2) = 1e-026
Identities = 52/126 (41%), Positives = 76/126 (60%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTG SGF+ SWL++ LL GY V TV++ + +T HL + GA RL++ + DLLE
Sbjct: 96 VCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQDESETKHLQAMDGANSRLRLFQMDLLE 275
Query: 950 EGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLT 771
S AV GVFH ASPV+ + + + PA+ GTL+VLR+ K + V+++
Sbjct: 276 PASIRPAVEGARGVFHVASPVILHRAQDPENELVEPALKGTLSVLRAAKDCGVGRVVMVS 455
Query: 770 SSSSAV 753
S ++ V
Sbjct: 456 SQTAMV 473
Score = 27.2 bits (53), Expect(2) = 1e-026
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1 / +3
Query: 713 LDETTWSSVPLCEKMHLWY 657
+DE +W+ + +K+ LWY
Sbjct: 504 VDEDSWADIEQLKKLQLWY 560
>gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A03_A002 5', mRNA sequence
Length = 784
Score = 62.0 bits (129), Expect(3) = 1e-026
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 1022 KTAHLWKLPGAKERLQIVRADLLEEGSFDSAVMACEGVFHTASPVLAKPD 873
K AHL L GA ERL + +ADLL+ + AV C+GVFHTASPV P+
Sbjct: 471 KNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDPE 620
Score = 62.0 bits (129), Expect(3) = 1e-026
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDP 1035
VCVTGA+G++ASWL+K LLE GY V GTVR+P
Sbjct: 366 VCVTGAAGYIASWLVKMLLEKGYTVKGTVRNP 461
Score = 35.4 bits (71), Expect(3) = 1e-026
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1 / +3
Query: 884 AKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGG 732
A P + E + PAV GT V+ + + ++RVV TSS+ AV + G
Sbjct: 594 ASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSTGAVTMDPSRG 746
>gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 482
Score = 122 bits (260), Expect = 1e-026
Identities = 57/132 (43%), Positives = 79/132 (59%)
Frame = -1 / +1
Query: 1148 RASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIV 969
R K VCVTGA GFVASWL++RLL G ++V + K AHL L GA ERL++
Sbjct: 19 RTMKKTVCVTGAGGFVASWLVQRLLSRGDYLVRGTVRDPSDPKNAHLMALDGAGERLRLF 198
Query: 968 RADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFL 789
+ADLL+ S +AV C+GVFH ASPV A + + + PAV GT N+L +
Sbjct: 199 KADLLDRASVAAAVAGCDGVFHVASPVPAVEPTNPDVEIMAPAVTGTQNMLEASHAANVR 378
Query: 788 KRVVLTSSSSAV 753
+ VV++S ++ +
Sbjct: 379 RVVVVSSVAAVI 414
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,436,279,756
Number of Sequences: 832831
Number of extensions: 22774707
Number of successful extensions: 224377
Number of sequences better than 1.0e-020: 123
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 38933680830
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)