TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115139.2.1
(1079 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AX512962.1| Sequence 7 from Patent WO02063021 182 e-100
gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle ... 314 2e-084
gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle ... 295 1e-078
gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adap... 122 2e-069
gb|CL154458.1|CL154458 104_339_10781423_114_31371_287 Sorgh... 124 1e-068
gb|BI141675.1|BI141675 IP1_55_E06.b1_A002 Immature pannicle... 256 5e-067
gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle... 183 1e-063
gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle... 183 1e-063
gb|BZ331520.1|BZ331520 hw10a10.g1 WGS-SbicolorF (JM107 adap... 239 6e-062
gb|CL160198.1|CL160198 104_350_10804807_114_31822_247 Sorgh... 239 6e-062
gb|CW072227.1|CW072227 104_325_10592141_114_30537 Sorghum m... 239 6e-062
gb|CW146117.1|CW146117 104_538_11138820_116_34979_034 Sorgh... 239 6e-062
gb|CW446801.1|CW446801 fsbb001f179k03f0 Sorghum methylation... 239 6e-062
gb|CW464925.1|CW464925 fsbb001f215g22f0 Sorghum methylation... 239 6e-062
gb|CW128866.1|CW128866 104_510_11114251_116_34758_070 Sorgh... 229 7e-059
gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle... 182 2e-057
gb|CL160199.1|CL160199 104_350_10804807_116_31823_247 Sorgh... 124 4e-057
gb|CW446802.1|CW446802 fsbb001f179k03k0 Sorghum methylation... 124 1e-056
gb|CW055082.1|CW055082 104_296_10516884_114_30174 Sorghum m... 124 2e-055
gb|CW501374.1|CW501374 fsbb001f297c11k0 Sorghum methylation... 122 8e-055
gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves... 122 2e-054
gb|CW464926.1|CW464926 fsbb001f215g22k0 Sorghum methylation... 124 5e-050
gb|BG946880.1|BG946880 IP1_1_H02.g1_A002 Immature pannicle ... 194 2e-048
gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylas... 116 2e-048
gb|CW498402.1|CW498402 fsbb001f291j19k0 Sorghum methylation... 122 2e-046
gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum b... 82 1e-042
gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bi... 82 4e-042
gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/c... 122 2e-041
gb|CW146118.1|CW146118 104_538_11138820_148_34983_034 Sorgh... 124 9e-040
gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves... 95 6e-039
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 99 9e-037
gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1... 73 3e-035
gb|CW117055.1|CW117055 104_493_11107455_148_34610_064 Sorgh... 149 5e-035
gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stress... 61 7e-035
gb|BI211709.1|BI211709 IP1_60_H10.g1_A002 Immature pannicle... 131 7e-034
gb|CW486984.1|CW486984 fsbb001f252j04f0 Sorghum methylation... 105 2e-033
gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sor... 98 7e-033
gb|BI245710.1|BI245710 IP1_63_C04.b1_A002 Immature pannicle... 130 1e-032
gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infecte... 122 1e-031
gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots S... 64 1e-031
gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-tr... 92 5e-031
gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-defic... 90 3e-030
gb|CN131058.1|CN131058 RHOH1_45_C08.g1_A002 Acid- and alkal... 57 9e-030
gb|CN128490.1|CN128490 RHOH1_29_G12.g1_A002 Acid- and alkal... 55 2e-029
gb|CW055083.1|CW055083 104_296_10516884_115_30175 Sorghum m... 129 8e-029
gb|BI141403.1|BI141403 IP1_55_E06.g1_A002 Immature pannicle... 128 1e-028
gb|BI351046.1|BI351046 IP1_69_B03.g1_A002 Immature pannicle... 68 2e-028
gb|CW410405.1|CW410405 fsbb001f105c06k0 Sorghum methylation... 89 3e-028
gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1... 86 4e-028
gb|CW044897.1|CW044897 104_281_10509231_115_30234 Sorghum m... 107 1e-027
gb|CW307337.1|CW307337 104_795_11468086_148_36060_089 Sorgh... 125 1e-027
gb|CW307965.1|CW307965 104_796_11468420_116_35731_076 Sorgh... 125 1e-027
gb|CW344753.1|CW344753 104_847_11488123_116_36201_072 Sorgh... 125 1e-027
gb|CW477732.1|CW477732 fsbb001f235d13k0 Sorghum methylation... 125 1e-027
gb|CW307336.1|CW307336 104_795_11468086_116_36059_089 Sorgh... 125 1e-027
gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-tr... 95 3e-027
gb|CD234981.1|CD234981 SS1_19_A07.g1_A012 Salt-stressed see... 124 3e-027
gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-defic... 67 8e-027
gb|CN127536.1|CN127536 RHOH1_23_C08.g3_A002 Acid- and alkal... 57 1e-026
gb|BG048279.1|BG048279 OV1_16_B11.g1_A002 Ovary 1 (OV1) Sor... 122 1e-026
gb|CD429768.1|CD429768 ETH1_15_C09.g1_A002 Ethylene-treated... 54 1e-026
gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed... 83 3e-026
gb|CW138853.1|CW138853 104_528_11134920_116_34889_084 Sorgh... 117 4e-026
gb|CW089593.1|CW089593 104_435_10948797_114_32596_095 Sorgh... 116 5e-026
gb|CW316348.1|CW316348 104_807_11472847_148_35846_020 Sorgh... 117 5e-026
gb|CW028789.1|CW028789 104_256_10499304_116_30400 Sorghum m... 76 6e-026
gb|CW222310.1|CW222310 104_657_11202308_116_37448_068 Sorgh... 119 6e-026
gb|CW028788.1|CW028788 104_256_10499304_114_30399 Sorghum m... 89 2e-025
gb|CW097532.1|CW097532 104_463_11002508_116_34347_070 Sorgh... 117 3e-025
gb|CW281027.1|CW281027 104_756_11407949_116_35451_023 Sorgh... 117 3e-025
gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1... 61 3e-025
gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated ... 61 5e-025
gb|CW394908.1|CW394908 fsbb001f082l15f0 Sorghum methylation... 113 7e-025
gb|BG157972.1|BG157972 OV1_15_D02.b1_A002 Ovary 1 (OV1) Sor... 115 2e-024
gb|CW421566.1|CW421566 fsbb001f130h05f0 Sorghum methylation... 113 4e-024
gb|AY748252.1| Sorghum bicolor voucher PI221540 NADPH-depen... 110 4e-024
gb|AY748253.1| Sorghum bicolor voucher PI221607 NADPH-depen... 110 4e-024
gb|AY748255.1| Sorghum bicolor voucher PI257595 NADPH-depen... 110 4e-024
gb|AY748257.1| Sorghum bicolor voucher PI287624 NADPH-depen... 110 4e-024
gb|AY748260.1| Sorghum bicolor voucher NSL51032 NADPH-depen... 110 4e-024
gb|AY748263.1| Sorghum bicolor voucher NSL51836 NADPH-depen... 110 4e-024
gb|AY748268.1| Sorghum bicolor voucher NSL83707 NADPH-depen... 110 4e-024
gb|AY748269.1| Sorghum bicolor voucher NSL87088 NADPH-depen... 110 4e-024
gb|AY748272.1| Sorghum x drummondii voucher L-WA12 NADPH-de... 110 4e-024
gb|AY748275.1| Sorghum arundinaceum voucher IS14252 NADPH-d... 110 4e-024
gb|AY748274.1| Sorghum arundinaceum voucher IS14235 NADPH-d... 110 4e-024
gb|AY748251.1| Sorghum bicolor voucher PI22913 NADPH-depend... 110 4e-024
gb|AY748261.1| Sorghum bicolor voucher NSL51365 NADPH-depen... 110 4e-024
gb|AY748262.1| Sorghum bicolor voucher NSL51397 NADPH-depen... 110 4e-024
gb|AY748264.1| Sorghum bicolor voucher PI510906 NADPH-depen... 110 4e-024
gb|AY748265.1| Sorghum bicolor voucher PI510985 NADPH-depen... 110 4e-024
gb|AY748266.1| Sorghum bicolor voucher NSL55751 NADPH-depen... 110 4e-024
gb|AY748267.1| Sorghum bicolor voucher NSL77034 NADPH-depen... 110 4e-024
gb|AY748270.1| Sorghum bicolor cultivar BTx623 NADPH-depend... 110 4e-024
gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infecte... 70 6e-024
gb|AY748254.1| Sorghum bicolor voucher PI221655 NADPH-depen... 109 1e-023
gb|AY748258.1| Sorghum bicolor voucher NSL50744 NADPH-depen... 109 1e-023
gb|AY748259.1| Sorghum bicolor voucher NSL50875 NADPH-depen... 109 1e-023
gb|AY748271.1| Sorghum bicolor cultivar RTx430 NADPH-depend... 109 1e-023
gb|AY748273.1| Sorghum arundinaceum voucher L-WA13 NADPH-de... 109 1e-023
gb|AY748249.1| Sorghum bicolor voucher PI152702 NADPH-depen... 109 1e-023
gb|AY748250.1| Sorghum bicolor voucher PI213900 NADPH-depen... 109 1e-023
gb|CW393559.1|CW393559 fsbb001f080k20f0 Sorghum methylation... 76 1e-023
gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed... 68 1e-023
gb|CW319030.1|CW319030 104_811_11474269_116_35878_055 Sorgh... 76 1e-023
gb|CW089594.1|CW089594 104_435_10948797_116_32594_095 Sorgh... 108 2e-023
gb|CW421567.1|CW421567 fsbb001f130h05k0 Sorghum methylation... 71 2e-023
gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficie... 67 3e-023
gb|AY748276.1| Sorghum arundinaceum voucher L-WA55 NADPH-de... 106 5e-023
gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG... 63 1e-022
gb|AY748277.1| Sorghum x drummondii voucher L-WA71 clone a ... 109 1e-022
gb|AY748278.1| Sorghum x drummondii voucher L-WA71 clone b ... 109 1e-022
gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves... 95 1e-022
gb|CW137978.1|CW137978 104_525_11119961_116_34878_071 Sorgh... 66 1e-022
gb|CW458492.1|CW458492 fsbb001f204m20f0 Sorghum methylation... 67 1e-022
gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorgh... 71 2e-022
gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorgh... 71 2e-022
gb|AY748256.1| Sorghum bicolor voucher PI267525 NADPH-depen... 104 2e-022
gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkali... 107 2e-022
gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkal... 107 2e-022
gb|U87453.1|SBU87453 Sorghum bicolor dihydroflavonol-4-redu... 71 4e-022
gb|CN138728.1|CN138728 OX1_13_C08.g1_A002 Oxidatively-stres... 55 8e-022
gb|CW287590.1|CW287590 104_765_11411495_116_35521_084 Sorgh... 70 8e-022
gb|BE359664.1|BE359664 DG1_56_G08.b2_A002 Dark Grown 1 (DG1... 55 3e-021
gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stres... 64 3e-021
gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infecte... 77 3e-021
gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seed... 60 4e-021
gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkal... 64 4e-021
gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stres... 64 4e-021
gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed see... 64 4e-021
gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stres... 64 4e-021
gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots ... 64 4e-021
gb|CW222311.1|CW222311 104_657_11202308_148_37449_068 Sorgh... 103 4e-021
gb|U87454.1|SBU87454 Sorghum bicolor dihydroflavonol-4-redu... 67 4e-021
gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sor... 101 5e-021
gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkal... 73 6e-021
gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassino... 73 6e-021
gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves... 73 6e-021
gb|CW408711.1|CW408711 fsbb001f102l13k0 Sorghum methylation... 64 6e-021
gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots ... 64 8e-021
>emb|AX512962.1| Sequence 7 from Patent WO02063021
Length = 697
Score = 182 bits (393), Expect(3) = e-100
Identities = 71/103 (68%), Positives = 88/103 (85%)
Frame = +1 / +1
Query: 415 DLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPT 594
D PN+ LDE++WSS+ CE +Q+WYA+AK+ AEKAAWEFA E+ IDLVTVLP+FV+GP+
Sbjct: 385 DDQPNISLDETTWSSVPLCEKMQLWYALAKVFAEKAAWEFAKENNIDLVTVLPSFVIGPS 564
Query: 595 LSPELGPTASDVLGLFQGETGKFTTYGRMGYVHIDDVARCHML 723
LS EL TASDVLGLFQG+T +F++YGRMGYVHIDDVA H+L
Sbjct: 565 LSHELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVATSHIL 693
Score = 170 bits (366), Expect(3) = e-100
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +1 / +1
Query: 31 VTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLEEG 210
VTGASGFIASWL+KRLLESGYHV+GTVRDPGN +K HLW L GAKERLQ+VRADLLEEG
Sbjct: 1 VTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEG 180
Query: 211 SFDDAVMACEGVFHTASPVVTGSNSKEE 294
SFD+AVM C+GVFHTASPV+ S+S +
Sbjct: 181 SFDNAVMDCDGVFHTASPVLAKSDSSSK 264
Score = 138 bits (296), Expect(3) = 3e-079
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = -1 / -3
Query: 287 LELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLT 108
LE D +TGDAVWKTPSQ++TA SKLPSS RSA T CSLS AP QRC F FPGSLT
Sbjct: 257 LESDLASTGDAVWKTPSQSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFW*FPGSLT 78
Query: 107 VPRTWYPDSRSRLTSQEAMKPDAPV 33
VP T YPDS SRL SQEA+KP+APV
Sbjct: 77 VPTT*YPDSSSRLISQEAIKPEAPV 3
Score = 130 bits (279), Expect(3) = 3e-079
Identities = 59/90 (65%), Positives = 66/90 (73%)
Frame = -1 / -3
Query: 719 MWHLATSSMWTYPILPYVVNFPVSPWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCS 540
MW +ATSSM TYPILP +N VSPWN+PRTSEAV SS D++GP T GRTVTRS+L S
Sbjct: 689 MWLVATSSM*TYPILP*ELNLAVSPWNKPRTSEAVTHSSWDKLGPITNDGRTVTRSMLFS 510
Query: 539 PANSQAAFSARIFATAYHIWRLSQNSMELH 450
ANS AAFSA FA AYH SQ+ ELH
Sbjct: 509 LANSHAAFSANTFARAYHSCIFSQSGTELH 420
Score = 88.6 bits (187), Expect(3) = 9e-034
Identities = 38/82 (46%), Positives = 50/82 (60%)
Frame = -3 / -2
Query: 282 IRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVSDCS 103
IR + C VEDA+ H S+V+APF Q+ISSH LQP P+V FL I WVSD
Sbjct: 252 IRFSEHRGCSVEDAITVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLVISWVSDSP 73
Query: 102 QDMVPRLKKPLDEPGGDETRRP 37
M+ RL++P D+P G++ P
Sbjct: 72 YHMISRLEQPFDKPRGNKA*SP 7
Score = 67.5 bits (141), Expect(3) = 3e-079
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -1 / -3
Query: 401 ILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELD 276
ILT DDEDVRTTL +GFFLH+ STF VPF A S+SSL L+
Sbjct: 377 ILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGQSVSSLLLE 252
Score = 55.6 bits (115), Expect(3) = 3e-024
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = +2 / +2
Query: 110 SETQGMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSSPDLI 283
SETQ + +K T G + ++GC ELI W+KGA T L W ASST H S +LI
Sbjct: 80 SETQEITKKQHTFGNYLVPKRGCKLCELICWKKGALTMLSWTVMASSTLHPLCSLNLI 253
Score = 54.2 bits (112), Expect(3) = 9e-034
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -3 / -2
Query: 402 DPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLLGIR 277
+PHCR ++NP ++WVLLAR+*H+ VYC K LL R
Sbjct: 378 NPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWTKRFLLATR 253
Score = 52.8 bits (109), Expect(3) = e-100
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 277 SNSKEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDE 411
S+SKEE L A+NGT+NVLRSCKKNP I+D+
Sbjct: 253 SSSKEETLCPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD 387
Score = 51.5 bits (106), Expect(3) = 3e-024
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3 / +3
Query: 285 QGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSED 401
QGG+A S+KR+ E A +VQEEPI+++GC + ++ SED
Sbjct: 261 QGGNALSSSKRYSECAKIVQEEPISEKGCSYVFIICSED 377
Score = 48.3 bits (99), Expect(3) = 3e-024
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3 / +3
Query: 585 RTYSVS*ARPHRF*CPRPVPRRDGEVHDVREDGVRPHRRRGEVPHAG 725
R + * +RF CPR +PR G+V +R++G+R HRR + PH G
Sbjct: 555 RAQFIP*TMCYRFRCPRLIPR*HGKVQFLRKNGIRSHRRCCDQPHPG 695
Score = 40.9 bits (83), Expect(3) = 9e-034
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = -3 / -2
Query: 654 RLSLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYLET 475
R++LE A DI SG + D++ ++ +VD VL GE P L + L G+P L
Sbjct: 624 RVTLE*A*DI*SGNT*FMG*TGPDHK*WEDSHKVDVVLLGEFPCRFLCKYLR*GIP*LHL 445
Query: 474 FAELDGAPRRFVQQHVR 424
F E AP F+Q +R
Sbjct: 444 FTEWHRAPCCFIQ*DIR 394
>gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 314 bits (679), Expect = 2e-084
Identities = 130/157 (82%), Positives = 138/157 (87%)
Frame = +1 / +3
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
A+T KGKVCVTGASGFIASWL+KRLLESGYHVLGTVRDPGN KKVGHLW LEGAKERLQL
Sbjct: 15 ASTGKGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPGNHKKVGHLWVLEGAKERLQL 194
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAINGTMNVLRSCKKNPXXX 363
VRADLLEEGSFDDAVMACEGVFHTASPV+T S+SKEEML+SAINGT+NVLRSCKKNP
Sbjct: 195 VRADLLEEGSFDDAVMACEGVFHTASPVITKSDSKEEMLNSAINGTLNVLRSCKKNPSLR 374
Query: 364 XXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIEFCE 474
IKDEADLPPNVLLDE+SWSSIE+CE
Sbjct: 375 RVVLTSSSATVRIKDEADLPPNVLLDETSWSSIEYCE 485
Score = 292 bits (632), Expect = 6e-078
Identities = 122/156 (78%), Positives = 131/156 (83%)
Frame = -3 / -1
Query: 471 AELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHL 292
A L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V AVYC*IKH
Sbjct: 482 AVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC*IKHF 303
Query: 291 LLGIRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVS 112
LLGIR DD RC VEDAL SHHSVV+APFLQE+SSH+LQP LCAFQ PEV YFL IPWVS
Sbjct: 302 LLGIRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEVSYFLVIPWVS 123
Query: 111 DCSQDMVPRLKKPLDEPGGDETRRPSDTDLTLSSVS 4
DCS+DMVPRLKKPLDEPGGDETR PSDTD TL+S S
Sbjct: 122 DCSEDMVPRLKKPLDEPGGDETRCPSDTDFTLTSAS 15
Score = 287 bits (622), Expect = 2e-076
Identities = 129/157 (82%), Positives = 130/157 (82%)
Frame = -1 / -2
Query: 473 SQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSI 294
SQ SMELHD LILTV DEDVRTTLL DGFFLHER TF VPFIAE SI
Sbjct: 484 SQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSI 305
Query: 293 SSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGS 114
SSLE D V TGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPS+ QRCPTFL FPGS
Sbjct: 304 SSLESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FPGS 125
Query: 113 LTVPRTWYPDSRSRLTSQEAMKPDAPVTQTLPLAVLA 3
LTVPRTWYPDSRSRL SQEAMKPDAPVTQTLPL VLA
Sbjct: 124 LTVPRTWYPDSRSRLMSQEAMKPDAPVTQTLPLPVLA 14
Score = 127 bits (273), Expect(2) = 6e-043
Identities = 57/73 (78%), Positives = 61/73 (83%)
Frame = +2 / +1
Query: 92 TMSWEQSETQGMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSS 271
TMS EQSETQG+ RK* TSG WKAQR+GCS *EL SWRKGA TTL*WL RASST H SS
Sbjct: 103 TMSSEQSETQGITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSS 282
Query: 272 PDLIPRRRCLIQQ 310
+LIPRR+CLIQQ
Sbjct: 283 LNLIPRRKCLIQQ 321
Score = 125 bits (268), Expect(2) = 1e-047
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = +3 / +2
Query: 3 G*HC*G*GLCHWGVWFHRLLARQAAS*VWVPCPGNSQRPREWQESRAPLGPGRRKGKAAA 182
G*H *G* LCHWG+WFHRLLA QAAS*VWVPCP NSQRPRE QESR PLG GRRKG+AAA
Sbjct: 14 G*HW*G*SLCHWGIWFHRLLAHQAAS*VWVPCPRNSQRPRESQESRTPLGFGRRKGEAAA 193
Score = 86.8 bits (183), Expect(2) = 1e-047
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +3 / +2
Query: 249 PHRIARRHRI*FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSEDQ 404
PH I+ H I*FQGG+A*FSNKRH ER+T +QEE I QEGCPD+ V D EDQ
Sbjct: 260 PHCISCHH*I*FQGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQ 415
Score = 68.4 bits (143), Expect(2) = 6e-043
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = +2 / +1
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSA 472
S GLS* RRR *GSRTKPTCPLTCCW GAP S+A
Sbjct: 370 SGGLS*RLRRRP*GSRTKPTCPLTCCWMKHHGAPLSTA 483
Score = 65.2 bits (136), Expect(2) = 2e-022
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = -2 / -3
Query: 400 SSLSTTRMSGQPS*AMGSSCTSVARSSCRLLLNQASPPWN 281
SS S T+ SGQPS* M SSC +V RS CRLLLN A PPWN
Sbjct: 411 SSRSPTKTSGQPS*GMDSSCMNVERSECRLLLN*AFPPWN 292
Score = 64.3 bits (134), Expect(2) = 2e-022
Identities = 31/44 (70%), Positives = 31/44 (70%)
Frame = -2 / -3
Query: 133 SCHSLGL*LFPGHGTQTQEXXXXXXXX*NQTPQ*HRPYP*QC*P 2
SC SLGL*LF GHGTQTQE *NQ PQ*HR YP QC*P
Sbjct: 144 SCDSLGL*LFRGHGTQTQEAA**ARRR*NQMPQ*HRLYPYQC*P 13
>gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 454
Score = 295 bits (638), Expect = 1e-078
Identities = 123/148 (83%), Positives = 130/148 (87%)
Frame = +1 / +3
Query: 67 VKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGV 246
+KRLLESGYHVLGTVRDPGN KKVGHLW LEGAKERLQLVRADLLEEGSFDDAVMACEGV
Sbjct: 9 IKRLLESGYHVLGTVRDPGNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGV 188
Query: 247 FHTASPVVTGSNSKEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPP 426
FHTASPV+T S+SKEEML+SAINGT+NVLRSCKKNP IKDEADLPP
Sbjct: 189 FHTASPVITKSDSKEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPP 368
Query: 427 NVLLDESSWSSIEFCESLQIWYAVAKIL 510
NVLLDE+SWSSIE+CESLQIWYAVAKIL
Sbjct: 369 NVLLDETSWSSIEYCESLQIWYAVAKIL 452
Score = 278 bits (601), Expect = 1e-073
Identities = 114/147 (77%), Positives = 124/147 (84%)
Frame = -3 / -3
Query: 507 DLCDGVPYLETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*H 328
DLC+G+PYLET A L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+
Sbjct: 449 DLCNGIPYLETLAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*N 270
Query: 327 VHRAVYC*IKHLLLGIRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAP 148
V AVYC*IKH LLGIR DD RC VEDAL SHHSVV+APFLQE+SSH+LQP LCAFQ P
Sbjct: 269 VQSAVYC*IKHFLLGIRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNP 90
Query: 147 EVPYFLAIPWVSDCSQDMVPRLKKPLD 67
EV YFL IPWVSDCS+DMVPRLKKPLD
Sbjct: 89 EVSYFLVIPWVSDCSEDMVPRLKKPLD 9
Score = 276 bits (597), Expect = 4e-073
Identities = 122/148 (82%), Positives = 123/148 (83%)
Frame = -1 / -1
Query: 512 ARIFATAYHIWRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHER 333
ARIFATAYHIWRLSQ SMELHD LILTV DEDVRTTLL DGFFLHER
Sbjct: 454 ARIFATAYHIWRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHER 275
Query: 332 STFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSR 153
TF VPFIAE SISSLE D V TGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPS+
Sbjct: 274 RTFRVPFIAELSISSLESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSK 95
Query: 152 PQRCPTFLPFPGSLTVPRTWYPDSRSRL 69
QRCPTFL FPGSLTVPRTWYPDSRSRL
Sbjct: 94 TQRCPTFL*FPGSLTVPRTWYPDSRSRL 11
Score = 127 bits (273), Expect(2) = 9e-047
Identities = 57/73 (78%), Positives = 61/73 (83%)
Frame = +2 / +1
Query: 92 TMSWEQSETQGMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSS 271
TMS EQSETQG+ RK* TSG WKAQR+GCS *EL SWRKGA TTL*WL RASST H SS
Sbjct: 34 TMSSEQSETQGITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSS 213
Query: 272 PDLIPRRRCLIQQ 310
+LIPRR+CLIQQ
Sbjct: 214 LNLIPRRKCLIQQ 252
Score = 86.8 bits (183), Expect(3) = 5e-039
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +3 / +2
Query: 249 PHRIARRHRI*FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSEDQ 404
PH I+ H I*FQGG+A*FSNKRH ER+T +QEE I QEGCPD+ V D EDQ
Sbjct: 191 PHCISCHH*I*FQGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQ 346
Score = 81.3 bits (171), Expect(2) = 9e-047
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = +2 / +1
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSRYG 490
S GLS* RRR *GSRTKPTCPLTCCW GAP S+A+VSRYG
Sbjct: 301 SGGLS*RLRRRP*GSRTKPTCPLTCCWMKHHGAPLSTARVSRYG 432
Score = 78.0 bits (164), Expect(3) = 5e-039
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / +2
Query: 69 QAAS*VWVPCPGNSQRPREWQESRAPLGPGRRKGKAAA 182
QAAS*VWVPCP NSQRPRE QESR PLG GRRKG+AAA
Sbjct: 11 QAAS*VWVPCPRNSQRPRESQESRTPLGFGRRKGEAAA 124
Score = 36.8 bits (74), Expect(3) = 5e-039
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 447 VVELHRVLRKSPDMVRRRKDP 509
++ELH VLR+SPDMV R KDP
Sbjct: 389 IMELH*VLRESPDMVCRCKDP 451
>gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw10a10 5', DNA sequence
Length = 728
Score = 122 bits (261), Expect(4) = 3e-068
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1 / +2
Query: 121 GNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSK 288
GN KKVGHLW LEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV+T S+SK
Sbjct: 248 GNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVITKSDSK 415
Score = 116 bits (249), Expect(4) = 2e-069
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = -1 / -3
Query: 290 SLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFP 120
+LE D V TGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPS+ QRCPTFL FP
Sbjct: 417 ALESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FP 247
Score = 110 bits (235), Expect(4) = 2e-059
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3 / -2
Query: 288 LGIRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPW 118
LGIR DD RC VEDAL SHHSVV+APFLQE+SSH+LQP LCAFQ PEV YFL IP+
Sbjct: 415 LGIRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEVSYFLVIPY 245
Score = 94.5 bits (200), Expect(4) = 2e-069
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -3 / -2
Query: 444 FVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLL 286
F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V AVYC*IKH LL
Sbjct: 691 FIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC*IKHFLL 533
Score = 94.1 bits (199), Expect(4) = 2e-054
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +2 / +3
Query: 122 GMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSSPDLIPR 289
G+ RK* TSG WKAQR+GCS *EL SWRKGA TTL*WL RASST H SS +LIPR
Sbjct: 249 GITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSSLNLIPR 416
Score = 87.7 bits (185), Expect(4) = 3e-068
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1 / +1
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPG 123
+GKVCVTGASGFIASWL+KRLLESGYHVLGTVRDPG
Sbjct: 10 EGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPG 117
Score = 85.8 bits (181), Expect(4) = 2e-069
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -1 / -1
Query: 122 PGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQTLP 18
PGSLTVPRTWYPDSRSRL SQEAMKPDAPVTQTLP
Sbjct: 116 PGSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTLP 12
Score = 85.4 bits (180), Expect(4) = 2e-054
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3 / +3
Query: 18 G*GLCHWGVWFHRLLARQAAS*VWVPCPGNSQRPR 122
G* LCHWG+WFHRLLA QAAS*VWVPCP NSQRPR
Sbjct: 12 G*SLCHWGIWFHRLLAHQAAS*VWVPCPRNSQRPR 116
Score = 84.0 bits (177), Expect(4) = 2e-059
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3 / -3
Query: 120 WVSDCSQDMVPRLKKPLDEPGGDETRRPSDTDLTL 16
WVSDCS+DMVPRLKKPLDEPGGDETR PSDTD TL
Sbjct: 114 WVSDCSEDMVPRLKKPLDEPGGDETRCPSDTDFTL 10
Score = 83.5 bits (176), Expect(4) = 3e-068
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDE 444
+EEML+SAINGT+NVLRSCKKNP IKDEADLPPNVLLDE
Sbjct: 533 QEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDE 691
Score = 74.4 bits (156), Expect(4) = 2e-059
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -1 / -3
Query: 401 ILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLEL 279
ILTV DEDVRTTLL DGFFLHER TF VPFIAE SISS ++
Sbjct: 648 ILTVADEDVRTTLLRDGFFLHERRTFRVPFIAELSISSCKV 526
Score = 73.5 bits (154), Expect(4) = 2e-054
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3 / +1
Query: 282 FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSEDQ 404
F GG+A*FSNKRH ER+T +QEE I QEGCPD+ V D EDQ
Sbjct: 529 FAGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQ 651
Score = 29.9 bits (59), Expect(4) = 2e-069
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 482 WRLSQNSMELHD 447
WRLSQ SMELHD
Sbjct: 728 WRLSQYSMELHD 693
Score = 29.5 bits (58), Expect(4) = 3e-068
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 445 SSWSSIEFCESL 480
+SWSSIE+CESL
Sbjct: 691 TSWSSIEYCESL 726
Score = 24.4 bits (47), Expect(4) = 2e-059
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 481 GDFRRTRWSS 452
GDFR T+WSS
Sbjct: 727 GDFRSTQWSS 698
Score = 24.0 bits (46), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 447 VVELHRVLRKSP 482
++ELH VLRKSP
Sbjct: 693 IMELH*VLRKSP 728
>gb|CL154458.1|CL154458 104_339_10781423_114_31371_287 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781423, DNA
sequence
Length = 727
Score = 124 bits (265), Expect(3) = 1e-068
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1 / -2
Query: 484 IWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
IWYAVAKILAEKAAWEFA EHRIDLVTVLPTFV+GP LSPEL PTASDVLGLFQG
Sbjct: 219 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 55
Score = 119 bits (255), Expect(3) = 2e-065
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / +2
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHI 483
PWN+PRTSEAVG SSGDR+GP TKVGRTVTRSILCS ANSQAAFSARIFATAYHI
Sbjct: 56 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYHI 220
Score = 113 bits (242), Expect(3) = 1e-068
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +1 / -2
Query: 286 KEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIE 465
+EEML+SAINGT+NVLRSCKKNP IKDEADLPPNVLLDE+SWSSIE
Sbjct: 525 QEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWSSIE 346
Query: 466 FCESLQI 486
+CESLQ+
Sbjct: 345 YCESLQV 325
Score = 112 bits (239), Expect(3) = 2e-065
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = -3 / +1
Query: 486 YLETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC 307
+LETFA L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V AVYC
Sbjct: 325 HLETFAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC 504
Query: 306 *IKHLLL 286
*IKH LL
Sbjct: 505 *IKHFLL 525
Score = 99.6 bits (211), Expect(3) = 5e-054
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3 / +1
Query: 648 SLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYL 481
+LE AEDIRS GAELRRQ RSDN+GRKN +VDPVL G+LPG LLG DLC+G+PYL
Sbjct: 55 TLE*AEDIRSSGAELRRQVRSDNKGRKNSHKVDPVLFGKLPGRLLG*DLCNGIPYL 222
Score = 97.3 bits (206), Expect(3) = 5e-054
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1 / +2
Query: 482 WRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAE 303
WRLSQ SMELHD LILTV DEDVRTTLL DGFFLHER TF VPFIAE
Sbjct: 329 WRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAE 508
Query: 302 SSISSLEL 279
SISS ++
Sbjct: 509 LSISSCKV 532
Score = 79.9 bits (168), Expect(4) = 7e-040
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3 / -1
Query: 483 DMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF*CPRPVPR 647
DMV R KDP REG LGV +RAQDRP SSDL RT VS*A+PH F*CPR +PR
Sbjct: 220 DMVCRCKDPSREGGLGVCQRAQDRPCDCSSDLCYRT*PVS*AQPHCF*CPRLIPR 56
Score = 73.5 bits (154), Expect(4) = 7e-040
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3 / -1
Query: 282 FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSEDQ 404
F GG+A*FSNKRH ER+T +QEE I QEGCPD+ V D EDQ
Sbjct: 529 FAGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQ 407
Score = 63.4 bits (132), Expect(3) = 1e-068
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1 / -2
Query: 205 EGSFDDAVMACEGVFHTASPVVTGSNSK 288
EGSFDDAVMACEGVFHTASPV+T S+SK
Sbjct: 726 EGSFDDAVMACEGVFHTASPVITKSDSK 643
Score = 58.3 bits (121), Expect(3) = 2e-065
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -1 / +2
Query: 290 SLELDPVTTGDAVWKTPSQAITASSKLPS 204
+LE D V TGDAVWKTPSQAITASSKLPS
Sbjct: 641 ALESDLVMTGDAVWKTPSQAITASSKLPS 727
Score = 55.1 bits (114), Expect(3) = 5e-054
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -3 / +1
Query: 288 LGIRSGDDGRCGVEDALASHHSVVEAPF 205
LGIR DD RC VEDAL SHHSVV+APF
Sbjct: 643 LGIRFSDDRRCSVEDALTSHHSVVKAPF 726
Score = 44.6 bits (91), Expect(4) = 7e-040
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +2 / -3
Query: 206 KGASTTL*WLARASSTPHRPSSPDLIPR 289
KGA TTL*WL RASST H SS +LIPR
Sbjct: 725 KGALTTL*WLVRASSTLHLLSSLNLIPR 642
Score = 24.0 bits (46), Expect(4) = 7e-040
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 447 VVELHRVLRKSP 482
++ELH VLRKSP
Sbjct: 364 IMELH*VLRKSP 329
>gb|BI141675.1|BI141675 IP1_55_E06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 376
Score = 256 bits (553), Expect = 5e-067
Identities = 106/116 (91%), Positives = 112/116 (96%)
Frame = +1 / +3
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
A+T KGKVCVTGASGFIASWL+KRLLESGYHVLGTVRDPGN KKVGHLW LEGAKERLQL
Sbjct: 27 ASTGKGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPGNHKKVGHLWVLEGAKERLQL 206
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAINGTMNVLRSCKKN 351
VRADLLEEGSFDDAVMACEGVFHTASPV+T S+SKEEML+SAINGT+NVLRSCKKN
Sbjct: 207 VRADLLEEGSFDDAVMACEGVFHTASPVITKSDSKEEMLNSAINGTLNVLRSCKKN 374
Score = 244 bits (528), Expect = 1e-063
Identities = 106/117 (90%), Positives = 107/117 (91%)
Frame = -1 / -1
Query: 353 GFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCS 174
GFFLHER TF VPFIAE SISSLE D V TGDAVWKTPSQAITASSKLPSSKRSALTSCS
Sbjct: 376 GFFLHERRTFRVPFIAELSISSLESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCS 197
Query: 173 LSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQTLPLAVLA 3
LSFAPS+ QRCPTFL FPGSLTVPRTWYPDSRSRL SQEAMKPDAPVTQTLPL VLA
Sbjct: 196 LSFAPSKTQRCPTFL*FPGSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTLPLPVLA 26
Score = 223 bits (481), Expect = 4e-057
Identities = 92/116 (79%), Positives = 99/116 (85%)
Frame = -3 / -3
Query: 351 VLLARA*HVHRAVYC*IKHLLLGIRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQP 172
+LLA *+V AVYC*IKH LLGIR DD RC VEDAL SHHSVV+APFLQE+SSH+LQP
Sbjct: 374 ILLA*T*NVQSAVYC*IKHFLLGIRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQP 195
Query: 171 FLCAFQAPEVPYFLAIPWVSDCSQDMVPRLKKPLDEPGGDETRRPSDTDLTLSSVS 4
LCAFQ PEV YFL IPWVSDCS+DMVPRLKKPLDEPGGDETR PSDTD TL+S S
Sbjct: 194 LLCAFQNPEVSYFLVIPWVSDCSEDMVPRLKKPLDEPGGDETRCPSDTDFTLTSAS 27
Score = 127 bits (273), Expect = 2e-028
Identities = 57/73 (78%), Positives = 61/73 (83%)
Frame = +2 / +1
Query: 92 TMSWEQSETQGMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSS 271
TMS EQSETQG+ RK* TSG WKAQR+GCS *EL SWRKGA TTL*WL RASST H SS
Sbjct: 115 TMSSEQSETQGITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSS 294
Query: 272 PDLIPRRRCLIQQ 310
+LIPRR+CLIQQ
Sbjct: 295 LNLIPRRKCLIQQ 333
Score = 125 bits (268), Expect(2) = 8e-039
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = +3 / +2
Query: 3 G*HC*G*GLCHWGVWFHRLLARQAAS*VWVPCPGNSQRPREWQESRAPLGPGRRKGKAAA 182
G*H *G* LCHWG+WFHRLLA QAAS*VWVPCP NSQRPRE QESR PLG GRRKG+AAA
Sbjct: 26 G*HW*G*SLCHWGIWFHRLLAHQAAS*VWVPCPRNSQRPRESQESRTPLGFGRRKGEAAA 205
Score = 57.0 bits (118), Expect(2) = 8e-039
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3 / +2
Query: 249 PHRIARRHRI*FQGGDA*FSNKRHDERATLVQEE 350
PH I+ H I*FQGG+A*FSNKRH ER+T +QEE
Sbjct: 272 PHCISCHH*I*FQGGNA*FSNKRHSERSTFMQEE 373
>gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 524
Score = 183 bits (395), Expect(3) = 1e-063
Identities = 74/93 (79%), Positives = 83/93 (89%)
Frame = +1 / +1
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KGKVCVTGASGFIASWL+KRLLESGYHV+GTVRDPGN +K HLW L GAKERLQ+VRAD
Sbjct: 43 KGKVCVTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRAD 222
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
LLEEGSFD+AVM C+GVFHTASPV+ S+S +
Sbjct: 223 LLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSK 321
Score = 149 bits (321), Expect(3) = 1e-050
Identities = 66/91 (72%), Positives = 71/91 (78%)
Frame = -1 / -1
Query: 287 LELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLT 108
LE D +TGDAVWKTPSQ++TA SKLPSS RSA T CSLS AP QRC F FPGSLT
Sbjct: 314 LESDLASTGDAVWKTPSQSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFW*FPGSLT 135
Query: 107 VPRTWYPDSRSRLTSQEAMKPDAPVTQTLPL 15
VP T YPDS SRL SQEA+KP+APVT TLPL
Sbjct: 134 VPTT*YPDSSSRLISQEAIKPEAPVTHTLPL 42
Score = 91.8 bits (194), Expect(2) = 1e-027
Identities = 41/89 (46%), Positives = 53/89 (59%)
Frame = -3 / -3
Query: 282 IRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVSDCS 103
IR + C VEDA+ H S+V+APF Q+ISSH LQP P+V FL I WVSD
Sbjct: 309 IRFSEHRGCSVEDAITVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLVISWVSDSP 130
Query: 102 QDMVPRLKKPLDEPGGDETRRPSDTDLTL 16
M+ RL++P D+P G++ PS T L
Sbjct: 129 YHMISRLEQPFDKPRGNKA*SPSYTYFAL 43
Score = 68.0 bits (142), Expect(3) = 1e-050
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 401 ILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELD 276
ILT DDEDVRTTL +GFFLH+ STF VPF A +S+SSL L+
Sbjct: 434 ILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLLE 309
Score = 53.3 bits (110), Expect(2) = 1e-027
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -3 / -3
Query: 402 DPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLLGIR 277
+PHCR ++NP ++WVLLAR+*H+ VYC K LL R
Sbjct: 435 NPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWNKRFLLATR 310
Score = 52.8 bits (109), Expect(3) = 1e-063
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 277 SNSKEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDE 411
S+SKEE L A+NGT+NVLRSCKKNP I+D+
Sbjct: 310 SSSKEETLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD 444
Score = 47.8 bits (98), Expect(3) = 1e-063
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +1
Query: 415 DLPPNVLLDESSWSSIEFCESLQIWYA 495
D PN+ LDE++WSS+ CE +Q+WYA
Sbjct: 442 DDQPNISLDETTWSSVPLCEKMQLWYA 522
Score = 22.6 bits (43), Expect(3) = 1e-050
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3 / -3
Query: 495 GVPYLETFAELDGAPRRFVQQHVR 424
G+P L F E AP F+Q +R
Sbjct: 522 GIP*LHLFTEWHRAPCCFIQ*DIR 451
>gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 183 bits (395), Expect(3) = 1e-063
Identities = 74/93 (79%), Positives = 83/93 (89%)
Frame = +1 / +1
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KGKVCVTGASGFIASWL+KRLLESGYHV+GTVRDPGN +K HLW L GAKERLQ+VRAD
Sbjct: 16 KGKVCVTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRAD 195
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
LLEEGSFD+AVM C+GVFHTASPV+ S+S +
Sbjct: 196 LLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSK 294
Score = 149 bits (321), Expect(3) = 1e-050
Identities = 66/91 (72%), Positives = 71/91 (78%)
Frame = -1 / -1
Query: 287 LELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLT 108
LE D +TGDAVWKTPSQ++TA SKLPSS RSA T CSLS AP QRC F FPGSLT
Sbjct: 287 LESDLASTGDAVWKTPSQSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFW*FPGSLT 108
Query: 107 VPRTWYPDSRSRLTSQEAMKPDAPVTQTLPL 15
VP T YPDS SRL SQEA+KP+APVT TLPL
Sbjct: 107 VPTT*YPDSSSRLISQEAIKPEAPVTHTLPL 15
Score = 91.8 bits (194), Expect(2) = 1e-027
Identities = 41/89 (46%), Positives = 53/89 (59%)
Frame = -3 / -3
Query: 282 IRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVSDCS 103
IR + C VEDA+ H S+V+APF Q+ISSH LQP P+V FL I WVSD
Sbjct: 282 IRFSEHRGCSVEDAITVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLVISWVSDSP 103
Query: 102 QDMVPRLKKPLDEPGGDETRRPSDTDLTL 16
M+ RL++P D+P G++ PS T L
Sbjct: 102 YHMISRLEQPFDKPRGNKA*SPSYTYFAL 16
Score = 68.0 bits (142), Expect(3) = 1e-050
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 401 ILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELD 276
ILT DDEDVRTTL +GFFLH+ STF VPF A +S+SSL L+
Sbjct: 407 ILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLLE 282
Score = 53.3 bits (110), Expect(2) = 1e-027
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -3 / -3
Query: 402 DPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLLGIR 277
+PHCR ++NP ++WVLLAR+*H+ VYC K LL R
Sbjct: 408 NPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWNKRFLLATR 283
Score = 52.8 bits (109), Expect(3) = 1e-063
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 277 SNSKEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDE 411
S+SKEE L A+NGT+NVLRSCKKNP I+D+
Sbjct: 283 SSSKEETLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD 417
Score = 47.8 bits (98), Expect(3) = 1e-063
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +1
Query: 415 DLPPNVLLDESSWSSIEFCESLQIWYA 495
D PN+ LDE++WSS+ CE +Q+WYA
Sbjct: 415 DDQPNISLDETTWSSVPLCEKMQLWYA 495
Score = 22.6 bits (43), Expect(3) = 1e-050
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3 / -3
Query: 495 GVPYLETFAELDGAPRRFVQQHVR 424
G+P L F E AP F+Q +R
Sbjct: 495 GIP*LHLFTEWHRAPCCFIQ*DIR 424
>gb|BZ331520.1|BZ331520 hw10a10.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw10a10 5', DNA sequence
Length = 635
Score = 239 bits (516), Expect = 6e-062
Identities = 96/115 (83%), Positives = 103/115 (89%)
Frame = +1 / -3
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 531 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 352
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 351 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 187
Score = 198 bits (427), Expect = 1e-049
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -1 / +2
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 188 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 367
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 368 RASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 532
Score = 166 bits (357), Expect = 5e-040
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = -3 / +1
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 190 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 369
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 370 REQGDEVTAAQHRRVADVPPVGAGGLVRQ 456
Score = 141 bits (303), Expect = 2e-032
Identities = 59/101 (58%), Positives = 63/101 (62%)
Frame = +2 / -1
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 464 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 285
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLLV 1015
A WGW MAISPPPR + + L+
Sbjct: 284 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSLL 162
>gb|CL160198.1|CL160198 104_350_10804807_114_31822_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804807, DNA
sequence
Length = 588
Score = 239 bits (516), Expect = 6e-062
Identities = 96/115 (83%), Positives = 103/115 (89%)
Frame = +1 / -2
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 368 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 189
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 188 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 24
Score = 198 bits (427), Expect = 1e-049
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -1 / +1
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 25 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 204
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 205 RASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 369
Score = 166 bits (357), Expect = 5e-040
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = -3 / +3
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 27 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 206
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 207 REQGDEVTAAQHRRVADVPPVGAGGLVRQ 293
Score = 141 bits (302), Expect = 2e-032
Identities = 59/100 (59%), Positives = 62/100 (62%)
Frame = +2 / -3
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 301 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 122
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLL 1012
A WGW MAISPPPR + + L
Sbjct: 121 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSL 2
>gb|CW072227.1|CW072227 104_325_10592141_114_30537 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592141, DNA
sequence
Length = 604
Score = 239 bits (516), Expect = 6e-062
Identities = 96/115 (83%), Positives = 103/115 (89%)
Frame = +1 / +3
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 147 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 326
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 327 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 491
Score = 198 bits (427), Expect = 1e-049
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -1 / -1
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 490 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 311
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 310 RASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 146
Score = 166 bits (357), Expect = 5e-040
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = -3 / -3
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 488 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 309
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 308 REQGDEVTAAQHRRVADVPPVGAGGLVRQ 222
Score = 141 bits (303), Expect = 2e-032
Identities = 59/101 (58%), Positives = 63/101 (62%)
Frame = +2 / +1
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 214 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 393
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLLV 1015
A WGW MAISPPPR + + L+
Sbjct: 394 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSLL 516
>gb|CW146117.1|CW146117 104_538_11138820_116_34979_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138820, DNA
sequence
Length = 611
Score = 239 bits (516), Expect = 6e-062
Identities = 96/115 (83%), Positives = 103/115 (89%)
Frame = +1 / -1
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 476 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 297
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 296 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 132
Score = 198 bits (427), Expect = 1e-049
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -1 / +1
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 133 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 312
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 313 RASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 477
Score = 166 bits (357), Expect = 5e-040
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = -3 / +3
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 135 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 314
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 315 REQGDEVTAAQHRRVADVPPVGAGGLVRQ 401
Score = 141 bits (303), Expect = 2e-032
Identities = 59/101 (58%), Positives = 63/101 (62%)
Frame = +2 / -2
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 409 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 230
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLLV 1015
A WGW MAISPPPR + + L+
Sbjct: 229 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSLL 107
>gb|CW446801.1|CW446801 fsbb001f179k03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179k03, DNA
sequence
Length = 651
Score = 239 bits (516), Expect = 6e-062
Identities = 96/115 (83%), Positives = 103/115 (89%)
Frame = +1 / -2
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 497 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 318
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 317 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 153
Score = 198 bits (427), Expect = 1e-049
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -1 / +1
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 154 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 333
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 334 RASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 498
Score = 166 bits (357), Expect = 5e-040
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = -3 / +3
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 156 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 335
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 336 REQGDEVTAAQHRRVADVPPVGAGGLVRQ 422
Score = 141 bits (303), Expect = 2e-032
Identities = 59/101 (58%), Positives = 63/101 (62%)
Frame = +2 / -3
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 430 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 251
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLLV 1015
A WGW MAISPPPR + + L+
Sbjct: 250 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSLL 128
>gb|CW464925.1|CW464925 fsbb001f215g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215g22, DNA
sequence
Length = 505
Score = 239 bits (516), Expect = 6e-062
Identities = 96/115 (83%), Positives = 103/115 (89%)
Frame = +1 / -2
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 504 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 325
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 324 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 160
Score = 198 bits (427), Expect = 1e-049
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -1 / +2
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 161 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 340
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 341 RASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 505
Score = 162 bits (348), Expect = 1e-038
Identities = 73/89 (82%), Positives = 74/89 (83%)
Frame = -3 / +1
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 163 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 342
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG V A QHRR ADVPP GA GLVRQ
Sbjct: 343 REQGD*VTAAQHRRVADVPPVGAGGLVRQ 429
Score = 138 bits (295), Expect = 2e-031
Identities = 58/101 (57%), Positives = 62/101 (61%)
Frame = +2 / -3
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A T PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 437 ATSWRTSPPAPTGGTSATRRCCAAVT*SPCSRGGSRRIRSRGACPACTASRRTASTRPRP 258
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLLV 1015
A WGW MAISPPPR + + L+
Sbjct: 257 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSLL 135
>gb|CW128866.1|CW128866 104_510_11114251_116_34758_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114251, DNA
sequence
Length = 563
Score = 229 bits (494), Expect = 7e-059
Identities = 92/110 (83%), Positives = 98/110 (89%)
Frame = +1 / +1
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAY 825
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAY
Sbjct: 232 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAY 411
Query: 826 PVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHL 975
P+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHL
Sbjct: 412 PIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHL 561
Score = 191 bits (411), Expect = 2e-047
Identities = 79/111 (71%), Positives = 83/111 (74%)
Frame = -1 / -1
Query: 977 GRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNXXXXX 798
GRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 563 GRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNRRASR 384
Query: 797 XXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
ALQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 383 ATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 231
Score = 156 bits (335), Expect = 6e-037
Identities = 70/85 (82%), Positives = 71/85 (83%)
Frame = -3 / -3
Query: 975 EMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPPREQG 796
EMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPPREQG
Sbjct: 561 EMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPPREQG 382
Query: 795 GEVAAVQHRRAADVPPSGARGLVRQ 721
EV A QHRR ADVPP GA GLVRQ
Sbjct: 381 DEVTAAQHRRVADVPPVGAGGLVRQ 307
Score = 127 bits (273), Expect = 2e-028
Identities = 54/88 (61%), Positives = 55/88 (62%)
Frame = +2 / +2
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 299 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 478
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAIS 976
A WGW MAIS
Sbjct: 479 AHWGWWTSRASRRCSTTPSTRSEAMAIS 562
>gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 496
Score = 182 bits (393), Expect(3) = 2e-057
Identities = 74/93 (79%), Positives = 83/93 (89%)
Frame = +1 / +1
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KGKVCVTGASGFIASWL+KRLLESGYHV+GTVRDPGN +K HLW L GAKERLQ+VRAD
Sbjct: 43 KGKVCVTGASGFIASWLIKRLLESGYHVVGTVRDPGNLQKTAHLWKLPGAKERLQIVRAD 222
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
LLEEGSFD+AVM C+GVFHTASPV+ S+S +
Sbjct: 223 LLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSK 321
Score = 150 bits (323), Expect(2) = 1e-049
Identities = 66/91 (72%), Positives = 71/91 (78%)
Frame = -1 / -3
Query: 287 LELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLT 108
LE D +TGDAVWKTPSQ++TA SKLPSS RSA T CSLS AP QRC F FPGSLT
Sbjct: 314 LESDLASTGDAVWKTPSQSMTALSKLPSSNRSARTICSLSLAPGNFQRCAVFWRFPGSLT 135
Query: 107 VPRTWYPDSRSRLTSQEAMKPDAPVTQTLPL 15
VP T YPDS SRL SQEA+KP+APVT TLPL
Sbjct: 134 VPTT*YPDSSSRLISQEAIKPEAPVTHTLPL 42
Score = 91.3 bits (193), Expect(2) = 2e-027
Identities = 41/89 (46%), Positives = 53/89 (59%)
Frame = -3 / -2
Query: 282 IRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVSDCS 103
IR + C VEDA+ H S+V+APF Q+ISSH LQP P+V FL I WVSD
Sbjct: 309 IRFSEHRGCSVEDAITVHDSIVKAPFFQQISSHNLQPLFGTR*FPKVCCFLEISWVSDSP 130
Query: 102 QDMVPRLKKPLDEPGGDETRRPSDTDLTL 16
M+ RL++P D+P G++ PS T L
Sbjct: 129 YHMISRLEQPFDKPRGNKA*SPSYTYFAL 43
Score = 68.0 bits (142), Expect(2) = 1e-049
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1 / -3
Query: 401 ILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELD 276
ILT DDEDVRTTL +GFFLH+ STF VPF A +S+SSL L+
Sbjct: 434 ILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSLLLE 309
Score = 53.3 bits (110), Expect(2) = 2e-027
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -3 / -2
Query: 402 DPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLLGIR 277
+PHCR ++NP ++WVLLAR+*H+ VYC K LL R
Sbjct: 435 NPHCR**RRKNNPFQKWVLLARS*HIQSTVYCWNKRFLLATR 310
Score = 52.8 bits (109), Expect(3) = 2e-057
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 277 SNSKEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDE 411
S+SKEE L A+NGT+NVLRSCKKNP I+D+
Sbjct: 310 SSSKEETLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDD 444
Score = 27.6 bits (54), Expect(3) = 2e-057
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 415 DLPPNVLLDESSWSSI 462
D PN+ LDE++WSS+
Sbjct: 442 DDQPNISLDETTWSSV 489
>gb|CL160199.1|CL160199 104_350_10804807_116_31823_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804807, DNA
sequence
Length = 729
Score = 124 bits (265), Expect(2) = 4e-057
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1 / +1
Query: 484 IWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
IWYAVAKILAEKAAWEFA EHRIDLVTVLPTFV+GP LSPEL PTASDVLGLFQG
Sbjct: 97 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 261
Score = 122 bits (261), Expect(2) = 4e-057
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1 / +1
Query: 646 GETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRF 816
GET KFT YGRMGYVHIDDVARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRF
Sbjct: 559 GETVKFTVYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRF 729
Score = 119 bits (255), Expect(2) = 6e-045
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / -2
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHI 483
PWN+PRTSEAVG SSGDR+GP TKVGRTVTRSILCS ANSQAAFSARIFATAYHI
Sbjct: 260 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYHI 96
Score = 99.6 bits (211), Expect(2) = 3e-032
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3 / -1
Query: 648 SLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYL 481
+LE AEDIRS GAELRRQ RSDN+GRKN +VDPVL G+LPG LLG DLC+G+PYL
Sbjct: 261 TLE*AEDIRSSGAELRRQVRSDNKGRKNSHKVDPVLFGKLPGRLLG*DLCNGIPYL 94
Score = 86.3 bits (182), Expect(2) = 6e-045
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 764 LQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNFPVSP 645
LQMYLP APA SYA MWHLATSSMWTYPILPY VN VSP
Sbjct: 677 LQMYLPWAPADSYARMWHLATSSMWTYPILPYTVNLTVSP 558
Score = 85.8 bits (181), Expect(2) = 6e-033
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3 / +3
Query: 645 RRDGEVHDVREDGVRPHRRRGEVPHAGVRGRGRPREVHLQ 764
RRDG VH VREDGVRPHRRRGEVPH GVR R RPREVHLQ
Sbjct: 558 RRDG*VHGVREDGVRPHRRRGEVPHPGVRVRRRPREVHLQ 677
Score = 79.9 bits (168), Expect(2) = 6e-033
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3 / +3
Query: 483 DMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF*CPRPVPR 647
DMV R KDP REG LGV +RAQDRP SSDL RT VS*A+PH F*CPR +PR
Sbjct: 96 DMVCRCKDPSREGGLGVCQRAQDRPCDCSSDLCYRT*PVS*AQPHCF*CPRLIPR 260
Score = 63.8 bits (133), Expect(2) = 3e-032
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = -3 / -1
Query: 816 EPPREQGGEVAAVQHRRAADVPPSGARGLVRQ 721
EPPREQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 729 EPPREQGDEVTAAQHRRVADVPPVGAGGLVRQ 634
>gb|CW446802.1|CW446802 fsbb001f179k03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179k03, DNA
sequence
Length = 712
Score = 124 bits (265), Expect(3) = 1e-056
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1 / +1
Query: 484 IWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
IWYAVAKILAEKAAWEFA EHRIDLVTVLPTFV+GP LSPEL PTASDVLGLFQG
Sbjct: 460 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 624
Score = 119 bits (255), Expect(2) = 1e-053
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / -3
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHI 483
PWN+PRTSEAVG SSGDR+GP TKVGRTVTRSILCS ANSQAAFSARIFATAYHI
Sbjct: 623 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYHI 459
Score = 113 bits (242), Expect(3) = 1e-056
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIE 465
+EEML+SAINGT+NVLRSCKKNP IKDEADLPPNVLLDE+SWSSIE
Sbjct: 154 QEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWSSIE 333
Query: 466 FCESLQI 486
+CESLQ+
Sbjct: 334 YCESLQV 354
Score = 112 bits (239), Expect(2) = 1e-053
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = -3 / -2
Query: 486 YLETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC 307
+LETFA L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V AVYC
Sbjct: 354 HLETFAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC 175
Query: 306 *IKHLLL 286
*IKH LL
Sbjct: 174 *IKHFLL 154
Score = 99.6 bits (211), Expect(2) = 5e-043
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3 / -2
Query: 648 SLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYL 481
+LE AEDIRS GAELRRQ RSDN+GRKN +VDPVL G+LPG LLG DLC+G+PYL
Sbjct: 624 TLE*AEDIRSSGAELRRQVRSDNKGRKNSHKVDPVLFGKLPGRLLG*DLCNGIPYL 457
Score = 97.3 bits (206), Expect(2) = 5e-043
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1 / -3
Query: 482 WRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAE 303
WRLSQ SMELHD LILTV DEDVRTTLL DGFFLHER TF VPFIAE
Sbjct: 350 WRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAE 171
Query: 302 SSISSLEL 279
SISS ++
Sbjct: 170 LSISSCKV 147
Score = 79.9 bits (168), Expect(2) = 5e-031
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3 / +3
Query: 483 DMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF*CPRPVPR 647
DMV R KDP REG LGV +RAQDRP SSDL RT VS*A+PH F*CPR +PR
Sbjct: 459 DMVCRCKDPSREGGLGVCQRAQDRPCDCSSDLCYRT*PVS*AQPHCF*CPRLIPR 623
Score = 76.7 bits (161), Expect(2) = 5e-031
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +2 / +2
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSR 484
S GLS* RRR *GSRTKPTCPLTCCW GAP S+AKVSR
Sbjct: 227 SGGLS*RLRRRP*GSRTKPTCPLTCCWMKHHGAPLSTAKVSR 352
Score = 23.1 bits (44), Expect(3) = 1e-056
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 253 TASPVVTGSNSK 288
TASPV+T S+SK
Sbjct: 1 TASPVITKSDSK 36
>gb|CW055082.1|CW055082 104_296_10516884_114_30174 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516884, DNA
sequence
Length = 576
Score = 124 bits (265), Expect(2) = 2e-055
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1 / +3
Query: 484 IWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
IWYAVAKILAEKAAWEFA EHRIDLVTVLPTFV+GP LSPEL PTASDVLGLFQG
Sbjct: 330 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 494
Score = 119 bits (255), Expect(2) = 1e-053
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / -3
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHI 483
PWN+PRTSEAVG SSGDR+GP TKVGRTVTRSILCS ANSQAAFSARIFATAYHI
Sbjct: 493 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYHI 329
Score = 113 bits (242), Expect(2) = 2e-055
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIE 465
+EEML+SAINGT+NVLRSCKKNP IKDEADLPPNVLLDE+SWSSIE
Sbjct: 24 QEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWSSIE 203
Query: 466 FCESLQI 486
+CESLQ+
Sbjct: 204 YCESLQV 224
Score = 112 bits (239), Expect(2) = 1e-053
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = -3 / -2
Query: 486 YLETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC 307
+LETFA L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V AVYC
Sbjct: 224 HLETFAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC 45
Query: 306 *IKHLLL 286
*IKH LL
Sbjct: 44 *IKHFLL 24
Score = 99.6 bits (211), Expect(2) = 5e-043
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3 / -2
Query: 648 SLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYL 481
+LE AEDIRS GAELRRQ RSDN+GRKN +VDPVL G+LPG LLG DLC+G+PYL
Sbjct: 494 TLE*AEDIRSSGAELRRQVRSDNKGRKNSHKVDPVLFGKLPGRLLG*DLCNGIPYL 327
Score = 97.3 bits (206), Expect(2) = 5e-043
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1 / -3
Query: 482 WRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAE 303
WRLSQ SMELHD LILTV DEDVRTTLL DGFFLHER TF VPFIAE
Sbjct: 220 WRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAE 41
Query: 302 SSISSLEL 279
SISS ++
Sbjct: 40 LSISSCKV 17
Score = 79.9 bits (168), Expect(2) = 5e-031
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3 / +2
Query: 483 DMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF*CPRPVPR 647
DMV R KDP REG LGV +RAQDRP SSDL RT VS*A+PH F*CPR +PR
Sbjct: 329 DMVCRCKDPSREGGLGVCQRAQDRPCDCSSDLCYRT*PVS*AQPHCF*CPRLIPR 493
Score = 76.7 bits (161), Expect(2) = 5e-031
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +2 / +1
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSR 484
S GLS* RRR *GSRTKPTCPLTCCW GAP S+AKVSR
Sbjct: 97 SGGLS*RLRRRP*GSRTKPTCPLTCCWMKHHGAPLSTAKVSR 222
>gb|CW501374.1|CW501374 fsbb001f297c11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f297c11, DNA
sequence
Length = 657
Score = 122 bits (261), Expect(2) = 8e-055
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1 / -3
Query: 121 GNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSK 288
GN KKVGHLW LEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV+T S+SK
Sbjct: 508 GNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVITKSDSK 341
Score = 116 bits (249), Expect(2) = 9e-053
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = -1 / +3
Query: 290 SLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFP 120
+LE D V TGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPS+ QRCPTFL FP
Sbjct: 339 ALESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FP 509
Score = 113 bits (242), Expect(2) = 8e-055
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +1 / -3
Query: 286 KEEMLDSAINGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIE 465
+EEML+SAINGT+NVLRSCKKNP IKDEADLPPNVLLDE+SWSSIE
Sbjct: 223 QEEMLNSAINGTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWSSIE 44
Query: 466 FCESLQI 486
+CESLQ+
Sbjct: 43 YCESLQV 23
Score = 112 bits (239), Expect(2) = 9e-053
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = -3 / +2
Query: 486 YLETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC 307
+LETFA L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V AVYC
Sbjct: 23 HLETFAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSAVYC 202
Query: 306 *IKHLLL 286
*IKH LL
Sbjct: 203 *IKHFLL 223
Score = 110 bits (235), Expect(2) = 2e-046
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3 / +2
Query: 288 LGIRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPW 118
LGIR DD RC VEDAL SHHSVV+APFLQE+SSH+LQP LCAFQ PEV YFL IP+
Sbjct: 341 LGIRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEVSYFLVIPY 511
Score = 97.3 bits (206), Expect(2) = 2e-046
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1 / +3
Query: 482 WRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAE 303
WRLSQ SMELHD LILTV DEDVRTTLL DGFFLHER TF VPFIAE
Sbjct: 27 WRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRVPFIAE 206
Query: 302 SSISSLEL 279
SISS ++
Sbjct: 207 LSISSCKV 230
Score = 94.1 bits (199), Expect(3) = 4e-036
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +2 / -1
Query: 122 GMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSSPDLIPR 289
G+ RK* TSG WKAQR+GCS *EL SWRKGA TTL*WL RASST H SS +LIPR
Sbjct: 507 GITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSSLNLIPR 340
Score = 73.5 bits (154), Expect(3) = 4e-036
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3 / -2
Query: 282 FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSEDQ 404
F GG+A*FSNKRH ER+T +QEE I QEGCPD+ V D EDQ
Sbjct: 227 FAGGNA*FSNKRHSERSTFMQEESIPQEGCPDVFVGDREDQ 105
Score = 24.0 bits (46), Expect(3) = 4e-036
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 447 VVELHRVLRKSP 482
++ELH VLRKSP
Sbjct: 62 IMELH*VLRKSP 27
>gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_A06_A002 5', mRNA sequence
Length = 857
Score = 122 bits (262), Expect(4) = 2e-054
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+V+ LL+ GY V TVRD + KK HL L+GAK+RL L +A LLE
Sbjct: 142 VCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPKKTLHLTALDGAKDRLHLFKASLLE 321
Query: 205 EGSFDDAVMACEGVFHTASP 264
EGSFD AV C+ VFHTASP
Sbjct: 322 EGSFDAAVHGCDTVFHTASP 381
Score = 98.2 bits (208), Expect(3) = 7e-024
Identities = 48/80 (60%), Positives = 51/80 (63%)
Frame = -1 / -1
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVW T S TA+SK PSS R AL CSLS APSR RC F S TV RT P
Sbjct: 380 GEAVWNTVSHP*TAASKEPSSSRLALNKCSLSLAPSRAVRCNVFFGSAVSRTVARTV*PR 201
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
SRS LT Q+AM PDAPVT T
Sbjct: 200 SRSSLTIQDAMYPDAPVTHT 141
Score = 81.7 bits (172), Expect(4) = 2e-054
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +1 / +1
Query: 406 DEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVV 585
+E P V +DE+ ++ + CE Q WY ++K LAE+AAW+F+ ++ ++VT+ P V+
Sbjct: 520 NEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVI 699
Query: 586 GPTLSPELGPTASDVLGLFQGET 654
GP L P L +A +L L G +
Sbjct: 700 GPLLQPTLNTSAEAILKLINGSS 768
Score = 37.3 bits (75), Expect(4) = 2e-054
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+ GT+NVL SCKK
Sbjct: 406 KAELLDPAVKGTLNVLGSCKK 468
Score = 30.4 bits (60), Expect(3) = 7e-024
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = -1 / -1
Query: 632 RTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQ 468
R + A+ S G GP T G VT S S N QAA SA + YH SQ
Sbjct: 746 RIASALVFSVGWSRGPITIAGFIVTISNPLSLENFQAACSASVLDKTYHC*VFSQ 582
Score = 29.5 bits (58), Expect(4) = 2e-054
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 682 GYVHIDDVARCHMLAYEAAGA 744
G+V++ DVA H+LAYE A
Sbjct: 790 GWVNVKDVALAHILAYEIPSA 852
Score = 26.3 bits (51), Expect(3) = 7e-024
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1 / -1
Query: 749 PRAPAASYASMWHLATSSMWTYPIL 675
P A SYA +W ATS T+P L
Sbjct: 857 PFAEGISYARIWARATSLTLTHPKL 783
>gb|CW464926.1|CW464926 fsbb001f215g22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215g22, DNA
sequence
Length = 613
Score = 124 bits (265), Expect(2) = 5e-050
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1 / +1
Query: 484 IWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
IWYAVAKILAEKAAWEFA EHRIDLVTVLPTFV+GP LSPEL PTASDVLGLFQG
Sbjct: 277 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 441
Score = 119 bits (255), Expect(2) = 3e-047
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / -3
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHI 483
PWN+PRTSEAVG SSGDR+GP TKVGRTVTRSILCS ANSQAAFSARIFATAYHI
Sbjct: 440 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYHI 276
Score = 99.6 bits (211), Expect(2) = 2e-037
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3 / -2
Query: 648 SLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYL 481
+LE AEDIRS GAELRRQ RSDN+GRKN +VDPVL G+LPG LLG DLC+G+PYL
Sbjct: 441 TLE*AEDIRSSGAELRRQVRSDNKGRKNSHKVDPVLFGKLPGRLLG*DLCNGIPYL 274
Score = 95.9 bits (203), Expect(2) = 5e-050
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = +1 / +1
Query: 316 GTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIEFCESLQI 486
GT+NVLRSCKKNP IKDEADLPPNVLLDE+SWSSIE+CESLQ+
Sbjct: 1 GTLNVLRSCKKNPSLRRVVLTSSSATVRIKDEADLPPNVLLDETSWSSIEYCESLQV 171
Score = 91.3 bits (193), Expect(2) = 3e-047
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = -3 / -2
Query: 486 YLETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRA 316
+LETFA L+GAP F+QQHVRGQVGFVLDPH RRR QDNP E W+LLA *+V A
Sbjct: 171 HLETFAVLNGAP*CFIQQHVRGQVGFVLDPHGRRRRRQDNPPEGWILLA*T*NVQSA 1
Score = 79.9 bits (168), Expect(2) = 5e-031
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3 / +3
Query: 483 DMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF*CPRPVPR 647
DMV R KDP REG LGV +RAQDRP SSDL RT VS*A+PH F*CPR +PR
Sbjct: 276 DMVCRCKDPSREGGLGVCQRAQDRPCDCSSDLCYRT*PVS*AQPHCF*CPRLIPR 440
Score = 78.5 bits (165), Expect(2) = 2e-037
Identities = 36/55 (65%), Positives = 36/55 (65%)
Frame = -1 / -3
Query: 482 WRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIV 318
WRLSQ SMELHD LILTV DEDVRTTLL DGFFLHER TF V
Sbjct: 167 WRLSQYSMELHDVSSSNTLGGRSASSLILTVADEDVRTTLLRDGFFLHERRTFRV 3
Score = 76.7 bits (161), Expect(2) = 5e-031
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +2 / +2
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSR 484
S GLS* RRR *GSRTKPTCPLTCCW GAP S+AKVSR
Sbjct: 44 SGGLS*RLRRRP*GSRTKPTCPLTCCWMKHHGAPLSTAKVSR 169
>gb|BG946880.1|BG946880 IP1_1_H02.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 459
Score = 194 bits (419), Expect = 2e-048
Identities = 78/95 (82%), Positives = 85/95 (89%)
Frame = +1 / +1
Query: 706 ARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAYPVPRSLPRAYGEQSYGFDTS 885
ARCH+LAYE+AGA GRYIC+AAVL CGDL ALLARRFPAYP+PRSLP YGEQ+YGFDTS
Sbjct: 1 ARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTS 180
Query: 886 KARALGLAEFKGVEEMFDDAVASFIGHGHLPAAEE 990
KARALGL + KGVEEMFDDAV S GHGHLPAAE+
Sbjct: 181 KARALGLVDLKGVEEMFDDAVDSLRGHGHLPAAED 285
Score = 166 bits (357), Expect = 5e-040
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = -3 / -1
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 282 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 103
Query: 807 REQGGEVAAVQHRRAADVPPSGARGLVRQ 721
REQG EV A QHRR ADVPP GA GLVRQ
Sbjct: 102 REQGDEVTAAQHRRVADVPPVGAGGLVRQ 16
Score = 153 bits (329), Expect = 4e-036
Identities = 65/94 (69%), Positives = 69/94 (73%)
Frame = -1 / -2
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGNX 810
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 284 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGNR 105
Query: 809 XXXXXXXXXXXXXXALQMYLPRAPAASYASMWHL 708
ALQMYLP APA SYA MWHL
Sbjct: 104 RASRATRSPQHSTAALQMYLPWAPADSYARMWHL 3
Score = 141 bits (303), Expect = 2e-032
Identities = 59/101 (58%), Positives = 63/101 (62%)
Frame = +2 / +2
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRP 892
AT WRT P AP GGTSA RRC A TS PCSRGGS+R SRGACPA TAS RTASTRPRP
Sbjct: 8 ATSWRTSPPAPTGGTSATRRCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRP 187
Query: 893 ARWGWRNXXXXXXXXXXXXXXXXXMAISPPPRNAGTRSLLV 1015
A WGW MAISPPPR + + L+
Sbjct: 188 AHWGWWTSRASRRCSTTPSTRSEAMAISPPPRTSASMDSLL 310
>gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylase subunit SH2,
transcriptional regulator, NADPH-dependent reductase A1-a
and NADPH-dependent reductase A1-b genes, complete cds
Length = 42446
Score = 116 bits (247), Expect(3) = 2e-048
Identities = 51/134 (38%), Positives = 75/134 (55%)
Frame = +1 / +3
Query: 457 SIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLG 636
+I C + Y V+K LAEKAA +A EH ++LVT++ T VVGP LS + P+ L
Sbjct: 40365 TIYACPPGRQMYFVSKTLAEKAALAYAAEHGMELVTIITTLVVGPFLSTGMPPSMITRLA 40544
Query: 637 LFQGETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRF 816
L G ++ ++ +VH+DD+ H+ +E A GRY+CS+ DLAA+L R+
Sbjct: 40545 LVTGNEAHYSILKQVQFVHLDDLCDAHIFLFEHPAAAGRYVCSSCDTTIHDLAAMLRDRY 40724
Query: 817 PAYPVPRSLPRAYG 858
P Y +P P G
Sbjct: 40725 PEYDIPERFPAGTG 40766
Score = 113 bits (242), Expect = 4e-024
Identities = 46/119 (38%), Positives = 69/119 (57%)
Frame = +1 / +1
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKFTT 669
Y V+K LAEKAA +A EH +D ++++PT VVGP LS + P+ L L G ++
Sbjct: 29242 YFVSKSLAEKAAMAYAAEHGLDFISIIPTLVVGPFLSAGMPPSLITALALVTGNEAHYSI 29421
Query: 670 YGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAYPVPRSLP 846
++ +VH+DD+ H+ +E A GRY+CS+ LAA+L R+P Y +P P
Sbjct: 29422 LKQVQFVHLDDLCDAHLFLFEHPAAAGRYVCSSHDATIHGLAAMLRDRYPEYDIPERFP 29598
Score = 70.7 bits (148), Expect(3) = 2e-048
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +1 / +2
Query: 109 VRDPGNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSK 288
VR P N K L L GA ERL L +ADL +EGSFDDA+ C GVFH A+P+ S
Sbjct: 28640 VRSPANVVKTKPLLDLPGATERLSLWKADLADEGSFDDAIRGCTGVFHVATPMDFESKDP 28819
Query: 289 E 291
E
Sbjct: 28820 E 28822
Score = 66.6 bits (139), Expect(5) = 2e-026
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 109 VRDPGNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSK 288
V P N K L L GA ERL L +ADL EGSFDDA+ C GVFH A+P+ S
Sbjct: 39781 VHSPANVVKTKPLLDLPGATERLSLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDP 39960
Query: 289 E 291
E
Sbjct: 39961 E 39963
Score = 63.8 bits (133), Expect(5) = 2e-026
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +1 / +2
Query: 10 TAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPG 123
+ KG V VTGASGF+ SWLV +LL++GY V TVRDPG
Sbjct: 39536 SVKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPG 39649
Score = 62.9 bits (131), Expect(3) = 2e-048
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPG 123
KG V VTGASGF+ SWLV +LL++GY V TVRDPG
Sbjct: 28400 KGPVVVTGASGFLGSWLVMKLLQAGYTVRATVRDPG 28507
Score = 54.7 bits (113), Expect(5) = 2e-021
Identities = 29/63 (46%), Positives = 33/63 (52%)
Frame = -1 / -1
Query: 296 ISSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPG 117
I+S LD + G A WKTP Q + ASSKLPS+ RSA S AP R F F G
Sbjct: 39968 ITSGSLDSKSMGVATWKTPVQPLMASSKLPSTARSAFHRDRRSVAPGRSSNGFVFTTFAG 39789
Query: 116 SLT 108
T
Sbjct: 39788 E*T 39780
Score = 48.3 bits (99), Expect(5) = 2e-021
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 122 PGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQTLPLAV 9
PGS TV RT P RS +TSQE KPDAPVT T P +
Sbjct: 39648 PGSRTVARTV*PAWRSFMTSQEPTKPDAPVTTTGPFTL 39535
Score = 43.7 bits (89), Expect(5) = 2e-021
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 596 RVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAY 489
R GPTT V VT S+ CS A + AAFSAR+ T Y
Sbjct: 40504 RKGPTTSVVMMVTSSMPCSAAYASAAFSARVLDTKY 40397
Score = 35.9 bits (72), Expect(5) = 2e-026
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +2 / +1
Query: 737 RAPEGGTSAARRCWTAATSPPCSRGGSQRTPSR 835
R P G TSA R TSPPCS G+ T SR
Sbjct: 40645 RPPPGATSAPRATPPYTTSPPCSGIGTPSTTSR 40743
Score = 30.4 bits (60), Expect(5) = 2e-021
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -3 / -1
Query: 834 RDGVRWEPPREQGGEVAAVQHRRAADVPPSGARGL 730
RD V P E GGEV R ADV P G R L
Sbjct: 40742 RDVVLGVPIPEHGGEVVYGGVARGADVAPGGGRVL 40638
Score = 27.6 bits (54), Expect(5) = 2e-026
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3 / +2
Query: 654 GEVHDVREDGVRPHRRRGEVPHAGVRGRGRPREVHL 761
G + D VRP RR PH +R GR R + L
Sbjct: 40562 GALLDPEAGAVRPPRRPLRRPHLPLRAPGRRRALRL 40669
Score = 27.6 bits (54), Expect(5) = 2e-026
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3 / +2
Query: 480 PDMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTY 593
P V R +P EG GVR A+ RH D R R +
Sbjct: 40388 PADVLRV*NPGGEGGAGVRGGARHGARHHHHDARGRAF 40501
Score = 27.2 bits (53), Expect(5) = 2e-021
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3 / -1
Query: 1008 RLRVPAFLGGGEMAMAYERGDGVVEHLL 925
R VP+ G G+ A+ R DGVV H+L
Sbjct: 40931 RAVVPSGSGEGDEALLPARPDGVVVHVL 40848
>gb|CW498402.1|CW498402 fsbb001f291j19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f291j19, DNA
sequence
Length = 649
Score = 122 bits (261), Expect(2) = 2e-046
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1 / -2
Query: 121 GNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSK 288
GN KKVGHLW LEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV+T S+SK
Sbjct: 303 GNHKKVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVITKSDSK 136
Score = 116 bits (249), Expect(2) = 1e-044
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = -1 / +2
Query: 290 SLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFP 120
+LE D V TGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPS+ QRCPTFL FP
Sbjct: 134 ALESDLVMTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSKTQRCPTFL*FP 304
Score = 110 bits (235), Expect(2) = 5e-041
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3 / +1
Query: 288 LGIRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPW 118
LGIR DD RC VEDAL SHHSVV+APFLQE+SSH+LQP LCAFQ PEV YFL IP+
Sbjct: 136 LGIRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEVSYFLVIPY 306
Score = 94.1 bits (199), Expect(2) = 4e-037
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +2 / -3
Query: 122 GMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSSPDLIPR 289
G+ RK* TSG WKAQR+GCS *EL SWRKGA TTL*WL RASST H SS +LIPR
Sbjct: 302 GITRK*DTSGFWKAQRRGCSL*ELTSWRKGALTTL*WLVRASSTLHLLSSLNLIPR 135
Score = 88.1 bits (186), Expect(2) = 2e-046
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1 / -2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPG 123
+GKVCVTGASGFIASWL+KRLLESGYHVLGTVRDPG
Sbjct: 540 RGKVCVTGASGFIASWLIKRLLESGYHVLGTVRDPG 433
Score = 87.7 bits (185), Expect(2) = 1e-044
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -1 / +2
Query: 122 PGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQTLPL 15
PGSLTVPRTWYPDSRSRL SQEAMKPDAPVTQTLPL
Sbjct: 434 PGSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTLPL 541
Score = 85.4 bits (180), Expect(2) = 4e-037
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3 / -1
Query: 18 G*GLCHWGVWFHRLLARQAAS*VWVPCPGNSQRPR 122
G* LCHWG+WFHRLLA QAAS*VWVPCP NSQRPR
Sbjct: 538 G*SLCHWGIWFHRLLAHQAAS*VWVPCPRNSQRPR 434
Score = 82.2 bits (173), Expect(2) = 5e-041
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -3 / +1
Query: 120 WVSDCSQDMVPRLKKPLDEPGGDETRRPSDTDLT 19
WVSDCS+DMVPRLKKPLDEPGGDETR PSDTD T
Sbjct: 436 WVSDCSEDMVPRLKKPLDEPGGDETRCPSDTDFT 537
>gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_F11_A002 5', mRNA sequence
Length = 773
Score = 81.7 bits (172), Expect(4) = 1e-042
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +1 / +1
Query: 406 DEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVV 585
+E P V +DE+ ++ + CE Q WY ++K LAE+AAW+F+ ++ ++VT+ P V+
Sbjct: 502 NEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVI 681
Query: 586 GPTLSPELGPTASDVLGLFQGET 654
GP L P L +A +L L G +
Sbjct: 682 GPLLQPTLNTSAEAILKLINGSS 750
Score = 56.5 bits (117), Expect(4) = 1e-042
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / +1
Query: 142 HLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASP 264
H G K+RL L +A LLEEGSFD AV C+ VFHTASP
Sbjct: 241 HRAGHR*PKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 363
Score = 56.1 bits (116), Expect(4) = 1e-042
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRD 117
VCVTGASG+IASW+V+ LL+ GY V TVRD
Sbjct: 161 VCVTGASGYIASWIVRLLLDRGYTVRATVRD 253
Score = 37.3 bits (75), Expect(4) = 1e-042
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+ GT+NVL SCKK
Sbjct: 388 KAELLDPAVKGTLNVLGSCKK 450
>gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_6_A05_A002 5', mRNA sequence
Length = 782
Score = 81.7 bits (172), Expect(4) = 4e-042
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +1 / +2
Query: 406 DEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVV 585
+E P V +DE+ ++ + CE Q WY ++K LAE+AAW+F+ ++ ++VT+ P V+
Sbjct: 446 NEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVI 625
Query: 586 GPTLSPELGPTASDVLGLFQGET 654
GP L P L +A +L L G +
Sbjct: 626 GPLLQPTLNTSAEAILKLINGSS 694
Score = 81.3 bits (171), Expect(4) = 4e-042
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = +1 / +2
Query: 85 SGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASP 264
+G V TVRD + KK HL L+GAK+RL L +A LLEEGSFD AV C+ VFHTASP
Sbjct: 128 AGKVVCATVRDTADPKKTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 307
Score = 37.3 bits (75), Expect(4) = 4e-042
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+ GT+NVL SCKK
Sbjct: 332 KAELLDPAVKGTLNVLGSCKK 394
Score = 29.5 bits (58), Expect(4) = 4e-042
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 682 GYVHIDDVARCHMLAYEAAGA 744
G+V++ DVA H+LAYE A
Sbjct: 716 GWVNVKDVALAHILAYEIPSA 778
>gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_H04_A007 5', mRNA sequence
Length = 659
Score = 122 bits (262), Expect(3) = 2e-041
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+V+ LL+ GY V TVRD + KK HL L+GAK+RL L +A LLE
Sbjct: 153 VCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPKKTLHLTALDGAKDRLHLFKASLLE 332
Query: 205 EGSFDDAVMACEGVFHTASP 264
EGSFD AV C+ VFHTASP
Sbjct: 333 EGSFDAAVHGCDTVFHTASP 392
Score = 49.2 bits (101), Expect(3) = 2e-041
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 406 DEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEF 534
+E P V +DE+ ++ + CE Q WY ++K LAE+AAW+F
Sbjct: 531 NEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKF 659
Score = 37.3 bits (75), Expect(3) = 2e-041
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+ GT+NVL SCKK
Sbjct: 417 KAELLDPAVKGTLNVLGSCKK 479
>gb|CW146118.1|CW146118 104_538_11138820_148_34983_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138820, DNA
sequence
Length = 645
Score = 124 bits (265), Expect(2) = 9e-040
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1 / +2
Query: 484 IWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
IWYAVAKILAEKAAWEFA EHRIDLVTVLPTFV+GP LSPEL PTASDVLGLFQG
Sbjct: 185 IWYAVAKILAEKAAWEFAKEHRIDLVTVLPTFVIGPNLSPELSPTASDVLGLFQG 349
Score = 119 bits (255), Expect(2) = 7e-035
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / -1
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHI 483
PWN+PRTSEAVG SSGDR+GP TKVGRTVTRSILCS ANSQAAFSARIFATAYHI
Sbjct: 348 PWNKPRTSEAVGLSSGDRLGPITKVGRTVTRSILCSLANSQAAFSARIFATAYHI 184
Score = 99.6 bits (211), Expect(2) = 5e-023
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3 / -3
Query: 648 SLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYL 481
+LE AEDIRS GAELRRQ RSDN+GRKN +VDPVL G+LPG LLG DLC+G+PYL
Sbjct: 349 TLE*AEDIRSSGAELRRQVRSDNKGRKNSHKVDPVLFGKLPGRLLG*DLCNGIPYL 182
Score = 79.9 bits (168), Expect(2) = 2e-024
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3 / +1
Query: 483 DMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF*CPRPVPR 647
DMV R KDP REG LGV +RAQDRP SSDL RT VS*A+PH F*CPR +PR
Sbjct: 184 DMVCRCKDPSREGGLGVCQRAQDRPCDCSSDLCYRT*PVS*AQPHCF*CPRLIPR 348
Score = 61.6 bits (128), Expect(2) = 9e-040
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +1 / +2
Query: 409 EADLPPNVLLDESSWSSIEFCESLQI 486
EADLPPNVLLDE+SWSSIE+CESLQ+
Sbjct: 2 EADLPPNVLLDETSWSSIEYCESLQV 79
Score = 54.2 bits (112), Expect(2) = 2e-024
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2 / +3
Query: 410 KPTCPLTCCWTNRRGAPSSSAKVSR 484
KPTCPLTCCW GAP S+AKVSR
Sbjct: 3 KPTCPLTCCWMKHHGAPLSTAKVSR 77
Score = 49.6 bits (102), Expect(2) = 7e-035
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3 / -3
Query: 486 YLETFAELDGAPRRFVQQHVRGQVGF 409
+LETFA L+GAP F+QQHVRGQVGF
Sbjct: 79 HLETFAVLNGAP*CFIQQHVRGQVGF 2
Score = 29.9 bits (59), Expect(2) = 5e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 482 WRLSQNSMELHD 447
WRLSQ SMELHD
Sbjct: 75 WRLSQYSMELHD 40
>gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_B03_A002 5', mRNA sequence
Length = 737
Score = 95.0 bits (201), Expect(3) = 6e-039
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTG SGFI SWLV+ LL GY V TV++ + + HL ++GA RL+L + DLLE
Sbjct: 89 VCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQDESETKHLQAMDGANSRLRLFQMDLLE 268
Query: 205 EGSFDDAVMACEGVFHTASPVV 270
S AV GVFH ASPV+
Sbjct: 269 PASIRPAVEGARGVFHVASPVI 334
Score = 80.8 bits (170), Expect(3) = 6e-039
Identities = 32/77 (41%), Positives = 50/77 (64%)
Frame = +1 / +2
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
P + ++DE SW+ IE + LQ+WY V+K LAEKAAW+FA + ++ V + P V+GPTL+
Sbjct: 482 PADKVVDEDSWADIEQLKKLQLWYNVSKTLAEKAAWDFAEKEGLEPVVLNPALVLGPTLT 661
Query: 601 PELGPTASDVLGLFQGE 651
P + + L + G+
Sbjct: 662 PNIMASLQMFLQIMGGK 712
Score = 25.4 bits (49), Expect(3) = 6e-039
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCK 345
+ E+++ A+ GT++VLR+ K
Sbjct: 356 ENELVEPALKGTLSVLRAAK 415
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 98.7 bits (209), Expect(3) = 9e-037
Identities = 44/81 (54%), Positives = 53/81 (65%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGA GF+ASWLV+RLL G +V+ K HL ++GA RL+L RADLL+
Sbjct: 72 VCVTGAGGFVASWLVERLLAGGRYVVHGTVRDPGDAKNAHLAAMDGAAARLRLFRADLLD 251
Query: 205 EGSFDDAVMACEGVFHTASPV 267
GS AV C+GVFH ASPV
Sbjct: 252 YGSVAAAVAGCDGVFHVASPV 314
Score = 70.3 bits (147), Expect(3) = 9e-037
Identities = 25/71 (35%), Positives = 46/71 (64%)
Frame = +1 / +3
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
P + ++DE+ WS +EFC + Q WY ++K LAE A+++A +D+V+V P+ V+GP
Sbjct: 468 PQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLRQ 647
Query: 601 PELGPTASDVL 633
+ ++S ++
Sbjct: 648 STVNASSSIIV 680
Score = 24.9 bits (48), Expect(3) = 9e-037
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 292 EMLDSAINGTMNVLRS 339
E+L A+ GTMNVL++
Sbjct: 348 ELLAPAVTGTMNVLKA 395
>gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 73.5 bits (154), Expect(3) = 3e-035
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTL 597
PN +D++ WS +E+C++ Q WY AK +AE+ AWE A + +DL+ V P V+GP L
Sbjct: 383 PNKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRGLDLIVVNPVLVLGPLL 556
Score = 61.1 bits (127), Expect(3) = 3e-035
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 31 VTGASGFIASWLVKRLLESGYHVLGTVRDPGNGK 132
VTGA GFIASWLVKRLLE GY V GTVR+P + K
Sbjct: 11 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 112
Score = 57.9 bits (120), Expect(3) = 3e-035
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1 / +2
Query: 133 KVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 267
K HL L+GA +RL L+RADLL+ S +A C+GVFH ASPV
Sbjct: 110 KNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPV 244
>gb|CW117055.1|CW117055 104_493_11107455_148_34610_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107455, DNA
sequence
Length = 257
Score = 149 bits (321), Expect = 5e-035
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1 / -2
Query: 769 AVLDCGDLAALLARRFPAYPVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAV 948
AVL CGDL ALLARRFPAYP+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV
Sbjct: 256 AVLCCGDLVALLARRFPAYPIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAV 77
Query: 949 ASFIGHGHLPAAEE 990
S GHGHLPAAE+
Sbjct: 76 DSLRGHGHLPAAED 35
Score = 137 bits (294), Expect = 3e-031
Identities = 61/73 (83%), Positives = 62/73 (84%)
Frame = -3 / +2
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 38 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 217
Query: 807 REQGGEVAAVQHR 769
REQG EV A QHR
Sbjct: 218 REQGDEVTAAQHR 256
Score = 118 bits (253), Expect = 1e-025
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = -1 / +3
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGN 813
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 36 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGN 212
Score = 108 bits (230), Expect = 2e-022
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2 / -3
Query: 770 RCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPRPARWGWRNXXXXXXXXXXXX 949
RC A TS PCSRGGS+R SRGACPA TAS RTASTRPRPA WGW
Sbjct: 255 RCCAAVTSSPCSRGGSRRIRSRGACPACTASRRTASTRPRPAHWGWWTSRASRRCSTTPS 76
Query: 950 XXXXXMAISPPPRNAGTRSLLV 1015
MAISPPPR + + L+
Sbjct: 75 TRSEAMAISPPPRTSASMDSLL 10
>gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 5', mRNA sequence
Length = 626
Score = 60.6 bits (126), Expect(4) = 7e-035
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +1 / +3
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTL 597
P + DES WS FC + WY AK +AE+ A E+ ++ +++VTV P V+GP L
Sbjct: 450 PHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNGLNVVTVCPCIVLGPLL 626
Score = 58.8 bits (122), Expect(4) = 7e-035
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 22 KVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGK 132
+VCVTG G++ASWLVK LL GY V TVRDP + K
Sbjct: 58 RVCVTGGGGYVASWLVKLLLSRGYAVHATVRDPSDPK 168
Score = 55.1 bits (114), Expect(4) = 7e-035
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +1
Query: 133 KVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNS 285
K HL L+GA E L L +AD+L+ + AV CEGVFH ASPV+ +S
Sbjct: 166 KNAHLRRLDGAPESLLLFKADVLDRDALAAAVAGCEGVFHVASPVLQTRSS 318
Score = 30.4 bits (60), Expect(4) = 7e-035
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKKN 351
+ E+L A+ GT+NVL++C N
Sbjct: 324 ESEVLSPAVKGTLNVLQACSAN 389
>gb|BI211709.1|BI211709 IP1_60_H10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 578
Score = 131 bits (280), Expect(2) = 7e-034
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = +1 / +2
Query: 643 QGETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPA 822
QG+T +F++YGRMGYVHIDDVA H+L YE A GRY+CS+ VLD +L +LLA+R+P
Sbjct: 2 QGDTARFSSYGRMGYVHIDDVASSHILVYETPHATGRYLCSSVVLDNDELVSLLAKRYPV 181
Query: 823 YPVPRSLPRAYGEQSYGFDTSKARALG 903
+P+PR L YG+QSY +TSK + LG
Sbjct: 182 FPIPRRLNSPYGKQSYQLNTSKLQGLG 262
Score = 35.0 bits (70), Expect(2) = 7e-034
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 910 EFKGVEEMFDDAVASFIGHGHL 975
+F+GV+EMFDD V S GHL
Sbjct: 266 KFRGVQEMFDDCVQSLKDQGHL 331
>gb|CW486984.1|CW486984 fsbb001f252j04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252j04, DNA
sequence
Length = 454
Score = 105 bits (223), Expect(3) = 2e-033
Identities = 43/61 (70%), Positives = 52/61 (85%)
Frame = +1 / +3
Query: 481 QIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGK 660
++WYA+AK+ AEKAAWEFA E+ IDLVTVLP+FV+GP+LS EL TASDVLGLFQG +
Sbjct: 252 KLWYALAKVFAEKAAWEFAKENNIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGNSFM 431
Query: 661 F 663
F
Sbjct: 432 F 434
Score = 88.1 bits (186), Expect(2) = 3e-025
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = -1 / -1
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYH 486
PWN+PRTSEAV SS D++GP T GRTVTRS+L S ANS AAFSA FA AYH
Sbjct: 418 PWNKPRTSEAVTHSSWDKLGPITNDGRTVTRSMLFSLANSHAAFSANTFARAYH 257
Score = 51.0 bits (105), Expect(2) = 3e-025
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / -2
Query: 401 ILTVDDEDVRTTLLSDGFFLHERSTFIV 318
ILT DDEDVRTTL +GFFLH+ STF V
Sbjct: 84 ILTADDEDVRTTLFRNGFFLHDLSTFRV 1
Score = 40.0 bits (81), Expect(3) = 2e-033
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 415 DLPPNVLLDESSWSSIEFCESLQIWY 492
D PN+ LDE++WSS+ CE +Q+ Y
Sbjct: 92 DDQPNISLDETTWSSVPLCEKMQVIY 169
Score = 37.3 bits (75), Expect(3) = 2e-033
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3 / +1
Query: 318 HDERATLVQEEPIAQEGCPDILVVDSED 401
+ E A +VQEEPI+++GC + ++ SED
Sbjct: 1 YSECAKIVQEEPISEKGCSYVFIICSED 84
>gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 97.7 bits (207), Expect(3) = 7e-033
Identities = 43/80 (53%), Positives = 51/80 (63%)
Frame = +1 / +1
Query: 52 IASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLEEGSFDDAVM 231
+ SWLV +LL +GY V TVRDP N +K L L GA ERL L +ADL EGSFDDA+
Sbjct: 1 VGSWLVMKLLHAGYTVRATVRDPANVEKTKPLLDLPGATERLSLWKADLAVEGSFDDAIR 180
Query: 232 ACEGVFHTASPVVTGSNSKE 291
C GVFH A+P+ S E
Sbjct: 181 GCTGVFHVATPMDFESKDPE 240
Score = 61.1 bits (127), Expect(3) = 7e-033
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +1 / +1
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPT 618
Y V+K LAEKAA +A EH +DL+TV+PT VVGP LS + P+
Sbjct: 439 YFVSKTLAEKAAMAYAAEHGVDLITVIPTLVVGPFLSAGMPPS 567
Score = 25.4 bits (49), Expect(3) = 7e-033
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 439 DESSWSSIEFCESLQI 486
DE SW+ ++FC +++
Sbjct: 379 DEDSWTDVDFCRRVKM 426
>gb|BI245710.1|BI245710 IP1_63_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 510
Score = 130 bits (278), Expect(3) = 1e-032
Identities = 55/95 (57%), Positives = 70/95 (73%)
Frame = +1 / +3
Query: 28 CVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLEE 207
CVTG +GFIA+ L++ LL +G+ V TVRDP + KVG LW LEGA ERLQLVRADL+ E
Sbjct: 45 CVTGGTGFIAAHLIRALLAAGHSVRATVRDPEDEGKVGFLWELEGAGERLQLVRADLMVE 224
Query: 208 GSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAI 312
GSFDDAV +GVFHTASPVV +++ ++ +
Sbjct: 225 GSFDDAVSGVDGVFHTASPVVVVGKDNKDVQETLV 329
Score = 105 bits (223), Expect = 2e-021
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = -1 / -3
Query: 326 FIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQ 147
F + + S S L L TTG+AVWKTPS +TASSKLPS+ RSA TSCS S APS
Sbjct: 343 FTIGSTSVSWTSLLSLPTTTTGEAVWKTPSTPLTASSKLPSTIRSARTSCSRSPAPSSSH 164
Query: 146 RCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQ 27
R PT GSLTV RT +P + S AMKP PVTQ
Sbjct: 163 RNPTLPSSSGSLTVARTEWPAASSARMRCAAMKPVPPVTQ 44
Score = 25.4 bits (49), Expect(3) = 1e-032
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
+E +++ + G NVLRSC +
Sbjct: 315 QETLVEPIVKGAANVLRSCAR 377
Score = 24.0 bits (46), Expect(3) = 1e-032
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 436 LDESSWSSIEFCES 477
L+ES WS ++C+S
Sbjct: 459 LNESHWSDADYCKS 500
>gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 503
Score = 122 bits (262), Expect(2) = 1e-031
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+V+ LL+ GY V TVRD + KK HL L+GAK+RL L +A LLE
Sbjct: 132 VCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPKKTLHLTALDGAKDRLHLFKASLLE 311
Query: 205 EGSFDDAVMACEGVFHTASP 264
EGSFD AV C+ VFHTASP
Sbjct: 312 EGSFDAAVHGCDTVFHTASP 371
Score = 35.9 bits (72), Expect(2) = 1e-031
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+ GT+NVL SCK+
Sbjct: 396 KAELLDPAVKGTLNVLGSCKR 458
>gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 5', mRNA sequence
Length = 742
Score = 64.3 bits (134), Expect(3) = 1e-031
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFV 582
P+V++DES WS + FC+ + WY K +AE+AAW+ A +DLV V P V
Sbjct: 584 PDVVVDESCWSDL*FCKKTRNWYCYGKAVAEQAAWDAARHRGVDLVVVNPVLV 742
Score = 60.6 bits (126), Expect(3) = 1e-031
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGK 132
VCVTGA+G+IASWLVK LLE GY V GTV +P + K
Sbjct: 203 VCVTGAAGYIASWLVKMLLEKGYTVKGTVWNPDDPK 310
Score = 56.1 bits (116), Expect(3) = 1e-031
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1 / +2
Query: 133 KVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 267
K HL GL+GA ERL L +ADLL+ + AV C+GVF T SPV
Sbjct: 308 KNAHLKGLDGAAERLILCKADLLDYDAICRAVQGCQGVFRTGSPV 442
>gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_F05_A012 5', mRNA sequence
Length = 645
Score = 92.3 bits (195), Expect(2) = 5e-031
Identities = 41/92 (44%), Positives = 57/92 (61%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASGFI SWLV+ LL+ GY V TV++ + + HL + GA RL+L + DL++
Sbjct: 105 VCVTGASGFIGSWLVRCLLDRGYTVHATVKNLQDEGETKHLQAMGGADARLRLFQMDLVD 284
Query: 205 EGSFDDAVMACEGVFHTASPVVTGSNSKEEML 300
S A+ GVFH ASP++ + E+ L
Sbjct: 285 PASVQPAIEGAHGVFHLASPMILQAEDPEKEL 380
Score = 64.3 bits (134), Expect(2) = 5e-031
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +1 / +3
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTV 567
PP ++D+ W+ +E + LQ+WY+V+K LAEKAAW+FA + + + +
Sbjct: 495 PPGKVIDDDCWADVELLKKLQLWYSVSKTLAEKAAWDFAEKEELQIAVL 641
>gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C04_A002 5', mRNA sequence
Length = 659
Score = 90.0 bits (190), Expect(2) = 3e-030
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASGFI SWLV+ LL+ GY V TV++ + + HL + GA RL+L + DL++
Sbjct: 124 VCVTGASGFIGSWLVRCLLDRGYTVHATVKNLQDEGETKHLQAMGGADARLRLFQMDLVD 303
Query: 205 EGSFDDAVMACEGVFHTASPVVTGSNSKEEML 300
A+ GVFH ASP++ + E+ L
Sbjct: 304 PAPVQPAIEGAHGVFHLASPMILQAEDPEKEL 399
Score = 63.8 bits (133), Expect(2) = 3e-030
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDL 558
PP ++D+ W+ +E + LQ+WY+V+K LAEKAAW+FA + + +
Sbjct: 514 PPGKVIDDDCWADVELLKKLQLWYSVSKTLAEKAAWDFAEKEELQI 651
>gb|CN131058.1|CN131058 RHOH1_45_C08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_45_C08_A002 5', mRNA sequence
Length = 769
Score = 57.4 bits (119), Expect(5) = 9e-030
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +1 / +2
Query: 1 RANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLE 159
R T CVTG +G+I S L+K LLE GY V TVR+P + +K HL GL+
Sbjct: 101 RNTTKLKTACVTGGNGYIGSALIKMLLEEGYAVKTTVRNPDDMEKNSHLKGLQ 259
Score = 55.1 bits (114), Expect(5) = 9e-030
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGE 651
Y V+K+L EKAA FA EH I LVTV P VG +P++ + D L + G+
Sbjct: 596 YCVSKVLLEKAACRFAEEHGISLVTVCPVLTVGAAPAPKVRTSIVDSLSMLSGD 757
Score = 41.4 bits (84), Expect(5) = 9e-030
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 175 LQLVRADLLEEGSFDDAVMACEGVFHTASPV 267
L ++RAD+ EEGS DDAV C+ F A+PV
Sbjct: 272 LTVLRADMDEEGSLDDAVAGCDYAFLVAAPV 364
Score = 26.7 bits (52), Expect(5) = 9e-030
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
+++ ++ ++ GT+N +RSC K
Sbjct: 386 EKQQIEPSVRGTLNAVRSCVK 448
Score = 23.5 bits (45), Expect(5) = 9e-030
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 436 LDESSWSSIEF 468
LDE SWS ++F
Sbjct: 533 LDEDSWSDVDF 565
>gb|CN128490.1|CN128490 RHOH1_29_G12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_29_G12_A002 5', mRNA sequence
Length = 798
Score = 55.1 bits (114), Expect(5) = 2e-029
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +1 / +1
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGE 651
Y V+K+L EKAA FA EH I LVTV P VG +P++ + D L + G+
Sbjct: 433 YCVSKVLLEKAACRFAEEHGISLVTVCPVLTVGAAPAPKVRTSIVDSLSMLSGD 594
Score = 54.7 bits (113), Expect(5) = 2e-029
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = +1 / +1
Query: 664 TTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAYPV 831
TT G + VHIDD+ R + E A A GRYIC + +LA LA ++P Y V
Sbjct: 628 TTSGALQLVHIDDLCRAELFLAEEAAAGGRYICCSLNTTVVELARFLAHKYPQYRV 795
Score = 42.3 bits (86), Expect(5) = 2e-029
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 175 LQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEM 297
L ++RAD+ EEGS DDAV C+ F A+PV + E++
Sbjct: 115 LTVLRADMDEEGSLDDAVAGCDYAFLVAAPVNLWAQDPEQI 237
Score = 27.2 bits (53), Expect(5) = 2e-029
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 292 EMLDSAINGTMNVLRSCKK 348
E ++ ++ GT+N +RSC K
Sbjct: 229 EQIEPSVRGTLNAVRSCVK 285
Score = 23.5 bits (45), Expect(5) = 2e-029
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 436 LDESSWSSIEF 468
LDE SWS ++F
Sbjct: 370 LDEDSWSDVDF 402
>gb|CW055083.1|CW055083 104_296_10516884_115_30175 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516884, DNA
sequence
Length = 344
Score = 129 bits (276), Expect = 8e-029
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = +1 / -3
Query: 799 LLARRFPAYPVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLP 978
LLA RFPAYP+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLP
Sbjct: 309 LLAPRFPAYPIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLP 130
Query: 979 AAEE 990
AAE+
Sbjct: 129 AAED 118
Score = 119 bits (255), Expect = 6e-026
Identities = 54/64 (84%), Positives = 55/64 (85%)
Frame = -3 / +1
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EP
Sbjct: 121 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPR 300
Query: 807 REQG 796
REQG
Sbjct: 301 REQG 312
Score = 118 bits (253), Expect = 1e-025
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = -1 / +2
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGN 813
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 119 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGN 295
>gb|BI141403.1|BI141403 IP1_55_E06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 327
Score = 128 bits (275), Expect = 1e-028
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = +1 / +3
Query: 805 ARRFPAYPVPRSLPRAYGEQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHLPAA 984
ARRFPAYP+PRSLP YGEQ+YGFDTSKARALGL + KGVEEMFDDAV S GHGHLPAA
Sbjct: 3 ARRFPAYPIPRSLPSVYGEQTYGFDTSKARALGLVDLKGVEEMFDDAVDSLRGHGHLPAA 182
Query: 985 EE 990
E+
Sbjct: 183 ED 188
Score = 118 bits (253), Expect = 1e-025
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = -1 / -3
Query: 989 SSAAGRWPWPMNEATASSNISSTPLNSASPSARALDVSKPYDCSP*ARGRLLGTGYAGN 813
SSAAGRWPWP++E+TASSNISSTPL S SP+ARALDVSKPY CSP GRLLG GYAGN
Sbjct: 187 SSAAGRWPWPLSESTASSNISSTPLRSTSPNARALDVSKPYVCSPYTLGRLLGIGYAGN 11
Score = 116 bits (248), Expect = 6e-025
Identities = 52/61 (85%), Positives = 53/61 (86%)
Frame = -3 / -2
Query: 987 LGGGEMAMAYERGDGVVEHLLDALEFRQPQRAGLGRVEAVRLLAVGAGQAPRDGVRWEPP 808
LGGGEMAMA ER DGVVEHLLDALE QPQ AGLGRVEAVRLLAV AGQAPRD +R EPP
Sbjct: 185 LGGGEMAMASERVDGVVEHLLDALEVHQPQCAGLGRVEAVRLLAVHAGQAPRDRIRREPP 6
Query: 807 R 805
R
Sbjct: 5 R 3
>gb|BI351046.1|BI351046 IP1_69_B03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 638
Score = 68.4 bits (143), Expect(4) = 2e-028
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +1 / +1
Query: 499 AKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKF 663
AK +AEK AW A EH IDLV V P+FV+GP L P+ T VL + +GE GK+
Sbjct: 1 AKTVAEKEAWRLAKEHGIDLVVVNPSFVIGPALGPKPTSTILIVLAMLKGELGKY 165
Score = 49.2 bits (101), Expect(4) = 2e-028
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1 / +1
Query: 679 MGYVHIDDVARCHMLAYEAAGARGRYICSAAV 774
+G+VH+DDV CH+LA E A A GR ICS V
Sbjct: 178 IGFVHVDDVVLCHVLAMEDARASGRLICSCDV 273
Score = 40.9 bits (83), Expect(4) = 2e-028
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1 / +1
Query: 859 EQSYGFDTSKARALGLAEFKGVEEMFDDAVASFIGHGHL 975
++ + DTSK +ALG F V +MFDD + SF G L
Sbjct: 367 DRPHRMDTSKVKALGFPPFLSVHQMFDDCIKSFQDKGLL 483
Score = 24.0 bits (46), Expect(4) = 2e-028
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 802 LARRFPAYPVPR 837
L R+P YP+PR
Sbjct: 304 LRERYPQYPIPR 339
>gb|CW410405.1|CW410405 fsbb001f105c06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105c06, DNA
sequence
Length = 673
Score = 88.6 bits (187), Expect(3) = 3e-028
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = +1 / +2
Query: 133 KVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAI 312
KVG LW LEGA ERLQLVRADL+ EGSFDDAV +GVFHTASPVV +++ ++ +
Sbjct: 287 KVGFLWELEGAGERLQLVRADLMVEGSFDDAVSGVDGVFHTASPVVVVGKDNKDVQETLV 466
Score = 51.0 bits (105), Expect(3) = 3e-028
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1 / +2
Query: 28 CVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGH 144
CVTG +GFIA+ L++ LL +G+ V TVRDPG H
Sbjct: 56 CVTGGTGFIAAHLIRALLAAGHSVRATVRDPGTPTSPSH 172
Score = 25.4 bits (49), Expect(3) = 3e-028
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
+E +++ + G NVLRSC +
Sbjct: 452 QETLVEPIVKGAANVLRSCAR 514
>gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 86.3 bits (182), Expect(3) = 4e-028
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
P+V++DES WS +EFC+ + WY K +AE+AAW+ A + +DLV V P VVGP L P
Sbjct: 328 PDVVVDESCWSDLEFCKKTRNWYCYGKAVAEQAAWDAARQRGVDLVVVNPVLVVGPLLQP 507
Query: 604 ELGPTASDVLGLFQG 648
+ + + VL G
Sbjct: 508 TVNASIAHVLKYLDG 552
Score = 58.8 bits (122), Expect(3) = 4e-028
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +1 / +1
Query: 133 KVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 267
K HL L+GA ERL L +ADLL+ + AV C+GVFHTASPV
Sbjct: 52 KNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPV 186
Score = 23.1 bits (44), Expect(3) = 4e-028
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 88 GYHVLGTVRDPGNGK 132
GY V GTVR+P + K
Sbjct: 10 GYTVKGTVRNPDDPK 54
>gb|CW044897.1|CW044897 104_281_10509231_115_30234 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509231, DNA
sequence
Length = 552
Score = 107 bits (228), Expect(3) = 1e-027
Identities = 40/69 (57%), Positives = 53/69 (76%)
Frame = +1 / +1
Query: 637 LFQGETGKFTTYGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRF 816
L G+T +F++YGRMGYVHIDDVA H+L YE A GRY+CS+ VLD +L +LLA+R+
Sbjct: 118 LSSGDTARFSSYGRMGYVHIDDVASSHILVYETPHATGRYLCSSVVLDNDELVSLLAKRY 297
Query: 817 PAYPVPRSL 843
P +P+PR L
Sbjct: 298 PVFPIPRRL 324
Score = 28.6 bits (56), Expect(3) = 1e-027
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 910 EFKGVEEMFDDAVAS 954
+F+GV+EMFDD V S
Sbjct: 470 KFRGVQEMFDDCVQS 514
Score = 27.2 bits (53), Expect(3) = 1e-027
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 853 YGEQSYGFDTSKARALG 903
YG+QSY +TSK + LG
Sbjct: 416 YGKQSYQLNTSKLQGLG 466
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,189,245,641
Number of Sequences: 832831
Number of extensions: 19624125
Number of successful extensions: 386026
Number of sequences better than 1.0e-020: 148
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 35866178704
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)