TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115097.2.2
(1086 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 368 e-101
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 171 9e-083
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 301 2e-080
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 250 1e-076
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 209 2e-074
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 171 4e-073
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 171 1e-072
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 171 5e-072
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 150 7e-071
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 211 1e-070
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 163 4e-067
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 169 5e-067
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 202 6e-063
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 151 3e-062
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 218 1e-060
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 199 2e-060
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 152 1e-059
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 171 7e-057
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 103 2e-055
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 136 4e-055
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 169 8e-055
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 141 4e-054
gb|CW464658.1|CW464658 fsbb001f215a12k0 Sorghum methylation... 210 3e-053
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 121 9e-053
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 106 3e-051
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 150 1e-050
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 111 4e-050
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 111 4e-050
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 113 5e-050
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 109 2e-049
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 196 4e-049
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 109 1e-048
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 111 1e-048
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 194 2e-048
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 111 5e-048
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 109 7e-048
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 106 2e-047
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 191 2e-047
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 105 3e-047
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 105 4e-047
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 145 2e-046
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 109 3e-046
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 103 1e-045
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 119 2e-045
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 106 4e-045
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 98 3e-044
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 179 6e-044
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 145 7e-044
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 102 8e-044
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 106 1e-043
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 100 1e-043
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 106 3e-043
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 109 9e-043
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 104 1e-042
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 111 2e-042
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 109 5e-042
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 111 9e-041
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 105 7e-040
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 105 7e-040
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 95 7e-040
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 105 1e-039
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 102 3e-039
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 102 3e-039
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 109 4e-038
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 93 1e-037
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 158 1e-037
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 157 2e-037
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 108 3e-037
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 130 3e-037
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 98 3e-037
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 88 7e-037
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 111 2e-036
gb|CL159581.1|CL159581 104_349_10804357_116_31382_181 Sorgh... 72 3e-036
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 109 4e-036
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 152 8e-036
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 102 1e-035
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 88 2e-035
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 106 3e-035
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 150 4e-035
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 98 1e-034
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 98 1e-034
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 106 2e-034
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 69 7e-034
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 93 2e-033
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 98 2e-033
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 96 4e-033
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 67 2e-032
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 103 2e-032
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 93 4e-032
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 68 4e-032
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 90 2e-031
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 97 2e-031
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 111 4e-031
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 135 1e-030
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 135 1e-030
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 135 1e-030
gb|CW421780.1|CW421780 fsbb001f130l24f0 Sorghum methylation... 89 3e-030
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 105 1e-029
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 98 2e-029
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 103 2e-029
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 113 3e-029
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 92 4e-029
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 89 4e-029
gb|CW179534.1|CW179534 104_593_11160150_148_36628_019 Sorgh... 84 5e-029
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 94 9e-029
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 103 4e-028
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 78 4e-028
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 116 7e-028
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 100 1e-027
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 74 1e-027
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 74 2e-027
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 80 2e-027
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 74 2e-027
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 74 3e-027
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 88 7e-027
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 73 1e-026
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 82 1e-026
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 81 1e-026
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 74 2e-026
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 74 2e-026
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 74 2e-026
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 69 2e-026
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 71 1e-025
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 109 2e-025
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 109 2e-025
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 109 2e-025
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 71 3e-025
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 71 3e-025
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 115 5e-025
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 103 7e-025
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 109 1e-024
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 100 2e-024
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 100 2e-024
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 79 2e-024
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 79 2e-024
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 79 2e-024
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 64 4e-024
gb|CW381842.1|CW381842 fsbb001f063g24k0 Sorghum methylation... 113 4e-024
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 82 1e-023
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 71 1e-023
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 102 3e-023
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 110 4e-023
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 67 1e-022
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 102 2e-022
gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorgh... 67 9e-022
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 70 2e-021
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 71 2e-021
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 71 2e-021
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 65 3e-021
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 58 4e-021
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 73 6e-021
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 62 8e-021
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 62 8e-021
>gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942159, DNA
sequence
Length = 654
Score = 368 bits (798), Expect = e-101
Identities = 145/165 (87%), Positives = 153/165 (92%)
Frame = +3 / -2
Query: 369 GCKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISY 548
G AA LVVTAT+LCPPN+Q SADSGGWCNPPREHFDLSMPAFLQIA+EKAGIVP+SY
Sbjct: 653 GAAAAAAALVVTATNLCPPNEQ*SADSGGWCNPPREHFDLSMPAFLQIAEEKAGIVPVSY 474
Query: 549 RRVACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQ 728
RRVAC +QGGIRY I GNKYFNMVT+TNVGGAGD+AAVSVKGSKRVKWTE+KRNWG VWQ
Sbjct: 473 RRVACARQGGIRYAIAGNKYFNMVTVTNVGGAGDVAAVSVKGSKRVKWTELKRNWGVVWQ 294
Query: 729 TGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF* 863
TGEDLTCESLTFRVMT DHRKATSWHVLP DWKFGVTYQASKNF*
Sbjct: 293 TGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKFGVTYQASKNF* 159
Score = 334 bits (723), Expect(2) = 9e-091
Identities = 139/165 (84%), Positives = 143/165 (86%)
Frame = -3 / +1
Query: 862 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 683
*KFLDAWYVTPNFQS+GRTCH+VALRWS VIT NVSDSQVRSSPVCHT PQLRF SVHLT
Sbjct: 160 *KFLDAWYVTPNFQSSGRTCHDVALRWSPVITLNVSDSQVRSSPVCHTTPQLRFSSVHLT 339
Query: 682 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWR 503
RLLPFTDTAA SPAPPTLV VTMLKYLFP M YRMPPC HAT R*E GTMPAFS AIWR
Sbjct: 340 RLLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWR 519
Query: 502 NAGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSVAALGLHP 368
NAGM RSKCSRGGLHHPPLSAD SLGGH+ VAVTT+ AA P
Sbjct: 520 NAGMDRSKCSRGGLHHPPLSADYCSLGGHKFVAVTTNAAAAAAAP 654
Score = 324 bits (702), Expect = 1e-087
Identities = 139/165 (84%), Positives = 146/165 (88%)
Frame = -2 / +3
Query: 887 KKRRESGYLEVLGRLVRDAELPVSGENVP*GGLAVVASHHPERQRLAGEVLPGLPHLPPV 708
K+ + LEVLGRLVRDAELPV GE+VP GLAVVA HHPERQRLAGEVLPGLPH PPV
Sbjct: 135 KRESDGYSLEVLGRLVRDAELPVLGEDVPRRGLAVVAGHHPERQRLAGEVLPGLPHYPPV 314
Query: 707 ALHLRPLNALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDA 528
AL LRPL+ALAPLHRHRR VAGAA+VGDRHHVEVLVPGDGVPDAAL RARHP VGDGHDA
Sbjct: 315 ALQLRPLDALAPLHRHRRHVAGAAHVGDRHHVEVLVPGDGVPDAALPRARHPPVGDGHDA 494
Query: 527 GLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRHHQ 393
GLLL DLEER H +VEVLPRRVAPPAAVR LL+VGRAQV RRHHQ
Sbjct: 495 GLLLRDLEERRHGQVEVLPRRVAPPAAVRRLLLVGRAQVRRRHHQ 629
Score = 144 bits (308), Expect(2) = 7e-055
Identities = 58/74 (78%), Positives = 58/74 (78%)
Frame = -1 / +2
Query: 606 TCSR*WCTGCRPASCTPPCGRRWARCRPSPVRSGGTRAC*GRSAPAAGCTTRRCPRTAGR 427
TCSR W TGCRPAS TPP GRR ARCRPSP RSGGT A GRSAPAAGCTTRRCP T R
Sbjct: 416 TCSRRWRTGCRPASRTPPAGRRRARCRPSPPRSGGTPAWTGRSAPAAGCTTRRCPPTTAR 595
Query: 426 WAGTGRSPSPPVLP 385
WAGT SPSPP P
Sbjct: 596 WAGTSSSPSPPTPP 637
Score = 144 bits (308), Expect(2) = 7e-068
Identities = 60/75 (80%), Positives = 60/75 (80%)
Frame = +2 / -1
Query: 386 GNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVPPDRTGEGRHRAHLLPQGGVH 565
G GGDGD VPAQR V GQRRVVQPAAGALRP HA VPPDR GEGRHRA LLP GGV
Sbjct: 636 GGVGGDGDELVPAQRAVVGGQRRVVQPAAGALRPVHAGVPPDRGGEGRHRARLLPAGGVR 457
Query: 566 EAGRHPVHHHREQVL 610
EAGRHPV H REQVL
Sbjct: 456 EAGRHPVRHRREQVL 412
Score = 135 bits (290), Expect(2) = 7e-068
Identities = 58/67 (86%), Positives = 60/67 (89%)
Frame = +2 / -1
Query: 662 VGEGEQAR*VDGDEAQLGASVADRGGPHLRVADVPGDD*RPPQGHLMARSPR*LEVRRHV 841
VGEGEQAR VDG EAQLG SVADRGGPHLRVADV GDD RPPQGH++AR PR LEVRRHV
Sbjct: 360 VGEGEQARQVDGAEAQLGGSVADRGGPHLRVADVQGDDRRPPQGHVVARPPRGLEVRRHV 181
Query: 842 PGVQELL 862
PGVQELL
Sbjct: 180 PGVQELL 160
Score = 95.0 bits (201), Expect(2) = 7e-055
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -1 / +2
Query: 888 EEEEGKWLLRSSWTPGT*RRTSSQRGERAMRWPCGGR*SSPGTSATRR*GPPR 730
EE E L+RSSWTPGT*RRTSS RG RA WPCGGR SSP TSATRR*GPPR
Sbjct: 134 EEGE*WLLIRSSWTPGT*RRTSSPRGGRATTWPCGGRRSSP*TSATRR*GPPR 292
Score = 72.5 bits (152), Expect(2) = 4e-025
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +1 / -3
Query: 385 RQHWW*RRPTCARPTTSSPRTAAGGATRRGSTST 486
R+ WW*RR TCARPT+SS RTAAGGATRRGSTST
Sbjct: 637 RRRWW*RRRTCARPTSSSRRTAAGGATRRGSTST 536
Score = 66.6 bits (139), Expect(2) = 4e-025
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +1 / -3
Query: 721 CGRPGRTSPASR*RSG**LATTARPPHGTFSPLTG 825
CGRPGRTSPASR*RSG** ATTARP GT SP TG
Sbjct: 301 CGRPGRTSPASR*RSG**PATTARPRRGTSSPRTG 197
Score = 22.1 bits (42), Expect(2) = 9e-091
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 917 LHGCLRACRL 888
LHGCLR RL
Sbjct: 94 LHGCLRCRRL 123
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 171 bits (369), Expect(3) = 9e-083
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 370 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 549
Query: 570 QGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
+GGIR+TI G+ YFN+V +TNV GAGD+ +VS+KGS
Sbjct: 550 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 657
Score = 117 bits (250), Expect(2) = 2e-044
Identities = 55/97 (56%), Positives = 60/97 (61%)
Frame = -3 / -2
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 659 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 480
Query: 499 AGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSV 389
AG SKC RGGLH PP S LGG + VAVT V
Sbjct: 479 AGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 369
Score = 116 bits (247), Expect(2) = 3e-028
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -2 / -1
Query: 650 VAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLP 471
V GA +VG +H VEV V DG PD ALL ARHP VGDGHDAG +L DLEE VEV
Sbjct: 630 VPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRA 451
Query: 470 RRVAPPAAVRGLLVVGRAQVGRRH 399
RRVAP A V G VVGRA+VG RH
Sbjct: 450 RRVAPAAVVAGEAVVGRAEVGGRH 379
Score = 109 bits (233), Expect(3) = 9e-083
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +1
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 160 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 339
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 340 DNDGQSCLPGTITVTAT 390
Score = 84.0 bits (177), Expect(2) = 2e-044
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -2
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 389 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 210
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 209 DASPPP*NVAWA 174
Score = 79.0 bits (166), Expect(2) = 5e-022
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +2 / +3
Query: 368 RVQAQRGNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVPPDRTGEGRHRAHLL 547
R G+ DG + +PAQ + +RR+VQPAA ALR A +PPDR RHRA L
Sbjct: 348 RAVVPAGHHHRDGHQLLPAQLRPPQRRRRLVQPAAPALRHGAAGLPPDRAVPRRHRARRL 527
Query: 548 PQGGVHEAGRHPVHHHREQVL 610
+G V E GR PVHH R +L
Sbjct: 528 QEGAVREEGRDPVHHQRPLLL 590
Score = 67.0 bits (140), Expect(3) = 9e-083
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 854
W M RNWGQ WQ+ L +SL+F+V SD R TS V PA W+FG T++ ++
Sbjct: 667 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 831
Score = 47.3 bits (97), Expect(2) = 5e-022
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 173 WAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGREH 301
W RPR +LRR VRH+G RV V+ H + GV GG EH
Sbjct: 159 WWLAERPRHVLRRRRRVRHNGRRVWVREHVQHGVRHEHGGAEH 287
Score = 31.3 bits (62), Expect(2) = 3e-028
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1 / -3
Query: 291 PPSARHTPARACPCTRTRPPWCRT 220
PP + TP C T TR P CRT
Sbjct: 277 PPCSCRTPCCTCSRTHTRRPLCRT 206
>gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118204, DNA
sequence
Length = 597
Score = 301 bits (651), Expect = 2e-080
Identities = 118/131 (90%), Positives = 124/131 (94%)
Frame = +3 / -2
Query: 471 REHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTITNVGGAGD 650
REHFDLSMPAF QIA+EKAGIVP+SYRRVAC +QGGIRY I GNKYFNMVT+TNVGGAGD
Sbjct: 596 REHFDLSMPAFFQIAEEKAGIVPVSYRRVACARQGGIRYAIAGNKYFNMVTVTNVGGAGD 417
Query: 651 IAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKF 830
+AAVSVKGSKRVKWTE+KRNWG VWQTGEDLTCESLTFRVMT DHRKATSWHVLP DWKF
Sbjct: 416 VAAVSVKGSKRVKWTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKF 237
Query: 831 GVTYQASKNF* 863
GVTYQASKNF*
Sbjct: 236 GVTYQASKNF* 204
Score = 276 bits (598), Expect(2) = 1e-073
Identities = 114/131 (87%), Positives = 117/131 (89%)
Frame = -3 / +1
Query: 862 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 683
*KFLDAWYVTPNFQS+GRTCH+VALRWS VIT NVSDSQVRSSPVCHT PQLRF SVHLT
Sbjct: 205 *KFLDAWYVTPNFQSSGRTCHDVALRWSPVITLNVSDSQVRSSPVCHTTPQLRFSSVHLT 384
Query: 682 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWR 503
RLLPFTDTAA SPAPPTLV VTMLKYLFP M YRMPPC HAT R*E GTMPAFS AIW+
Sbjct: 385 RLLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWK 564
Query: 502 NAGMLRSKCSR 470
NAGM RSKCSR
Sbjct: 565 NAGMDRSKCSR 597
Score = 272 bits (589), Expect = 6e-072
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = -2 / +3
Query: 887 KKRRESGYLEVLGRLVRDAELPVSGENVP*GGLAVVASHHPERQRLAGEVLPGLPHLPPV 708
K+ + LEVLGRLVRDAELPV GE+VP GLAVVA HHPERQRLAGEVLPGLPH PPV
Sbjct: 180 KRESDGYSLEVLGRLVRDAELPVLGEDVPRRGLAVVAGHHPERQRLAGEVLPGLPHYPPV 359
Query: 707 ALHLRPLNALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDA 528
AL LRPL+ALAPLHRHRR VAGAA+VGDRHHVEVLVPGDGVPDAAL RARHP VGDGHDA
Sbjct: 360 ALQLRPLDALAPLHRHRRHVAGAAHVGDRHHVEVLVPGDGVPDAALPRARHPPVGDGHDA 539
Query: 527 GLLLCDLEERGHAEVEVLP 471
GLLL DLEER H +VEVLP
Sbjct: 540 GLLLRDLEERRHGQVEVLP 596
Score = 135 bits (290), Expect(2) = 3e-052
Identities = 58/67 (86%), Positives = 60/67 (89%)
Frame = +2 / -1
Query: 662 VGEGEQAR*VDGDEAQLGASVADRGGPHLRVADVPGDD*RPPQGHLMARSPR*LEVRRHV 841
VGEGEQAR VDG EAQLG SVADRGGPHLRVADV GDD RPPQGH++AR PR LEVRRHV
Sbjct: 405 VGEGEQARQVDGAEAQLGGSVADRGGPHLRVADVQGDDRRPPQGHVVARPPRGLEVRRHV 226
Query: 842 PGVQELL 862
PGVQELL
Sbjct: 225 PGVQELL 205
Score = 95.0 bits (201), Expect(2) = 1e-036
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -1 / +2
Query: 888 EEEEGKWLLRSSWTPGT*RRTSSQRGERAMRWPCGGR*SSPGTSATRR*GPPR 730
EE E L+RSSWTPGT*RRTSS RG RA WPCGGR SSP TSATRR*GPPR
Sbjct: 179 EEGE*WLLIRSSWTPGT*RRTSSPRGGRATTWPCGGRRSSP*TSATRR*GPPR 337
Score = 91.8 bits (194), Expect(2) = 3e-052
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = +2 / -1
Query: 470 AGALRPQHARVPPDRTGEGRHRAHLLPQGGVHEAGRHPVHHHREQVL 610
AGALRP HA V PDR GEGRHRA LLP GGV EAGRHPV H REQVL
Sbjct: 597 AGALRPVHAGVLPDRGGEGRHRARLLPAGGVREAGRHPVRHRREQVL 457
Score = 83.1 bits (175), Expect(2) = 1e-036
Identities = 35/45 (77%), Positives = 35/45 (77%)
Frame = -1 / +2
Query: 606 TCSR*WCTGCRPASCTPPCGRRWARCRPSPVRSGGTRAC*GRSAP 472
TCSR W TGCRPAS TPP GRR ARCRPSP RSG T A GRSAP
Sbjct: 461 TCSRRWRTGCRPASRTPPAGRRRARCRPSPPRSGRTPAWTGRSAP 595
Score = 22.1 bits (42), Expect(2) = 1e-073
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 917 LHGCLRACRL 888
LHGCLR RL
Sbjct: 139 LHGCLRCRRL 168
>gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 250 bits (540), Expect(3) = 1e-076
Identities = 98/130 (75%), Positives = 114/130 (87%)
Frame = +3 / +2
Query: 474 EHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTITNVGGAGDI 653
EHFDL+MPAFL+I +EKAGIVPI+YR+VAC +QGGIRYTITGN +NMV +TNVGGAGD+
Sbjct: 206 EHFDLTMPAFLKIDEEKAGIVPITYRKVACARQGGIRYTITGNPNYNMVMVTNVGGAGDV 385
Query: 654 AAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 833
A+SVKG+KRVKWT MKR+WGQ+W T +LT ESLTFRVMT DHRKATSWHV P DWK+
Sbjct: 386 VALSVKGNKRVKWTPMKRSWGQLWITEVNLTGESLTFRVMTGDHRKATSWHVAPRDWKYD 565
Query: 834 VTYQASKNF* 863
TYQA+KNF*
Sbjct: 566 KTYQATKNF* 595
Score = 234 bits (505), Expect(2) = 5e-062
Identities = 100/144 (69%), Positives = 110/144 (76%)
Frame = -3 / -1
Query: 904 CGHAXXXXXGKVAT*KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVC 725
C H + +*KFL AWYV FQS G TC EVALRWS V+TRNVSDS VR + V
Sbjct: 636 CMHKEEAGRKMIRS*KFLVAWYVLSYFQSRGATCQEVALRWSPVMTRNVSDSPVRLTSVI 457
Query: 724 HTCPQLRFISVHLTRLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR* 545
+CPQLRFI VHLTRLLPFTD+A SPAPPTLV +TML + FPVMVYRMPPC HATLR*
Sbjct: 456 QSCPQLRFIGVHLTRLLPFTDSATTSPAPPTLVTITML*FGFPVMVYRMPPCLAHATLR* 277
Query: 544 EMGTMPAFSCAIWRNAGMLRSKCS 473
MGTMPAFS +I RNAGM+RSKCS
Sbjct: 276 VMGTMPAFSSSILRNAGMVRSKCS 205
Score = 194 bits (419), Expect(2) = 8e-050
Identities = 92/144 (63%), Positives = 101/144 (70%)
Frame = -2 / -3
Query: 905 LRACRLKKRRESGYLEVLGRLVRDAELPVSGENVP*GGLAVVASHHPERQRLAGEVLPGL 726
+ A R + + LEVLG LV LPV+G +VP GGLAVVA H ERQRLAGEV
Sbjct: 637 MHA*RRGRPEDDPILEVLGGLVCFVVLPVAGRDVPGGGLAVVAGHDAERQRLAGEVDLRD 458
Query: 725 PHLPPVALHLRPLNALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAV 546
P L P ALH RPL+AL LHR R V GAA+VG HHV V VP DGVPDAAL RARH A+
Sbjct: 457 PELSPAALHRRPLDALVALHRQRHHVPGAAHVGHHHHVVVRVPRDGVPDAALPRARHLAI 278
Query: 545 GDGHDAGLLLCDLEERGHAEVEVL 474
GDGH+AGLLL DLEER H EVEVL
Sbjct: 277 GDGHNAGLLLVDLEERRHGEVEVL 206
Score = 100 bits (212), Expect(3) = 3e-040
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = +2 / +1
Query: 662 VGEGEQAR*VDGDEAQLGASVADRGGPHLRVADVPGDD*RPPQGHLMARSPR*LEVRRHV 841
VGEG+QAR VD DEAQLG ++ G PH RVADVP D RPPQGHL+AR LEVR+++
Sbjct: 394 VGEGQQARQVDADEAQLGTALDHGGQPHRRVADVPRHDRRPPQGHLLARRAPRLEVRQNI 573
Query: 842 PGVQELL 862
PG QELL
Sbjct: 574 PGHQELL 594
Score = 80.3 bits (169), Expect(3) = 3e-040
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = +2 / +1
Query: 476 ALRPQHARVPPDRTGEGRHRAHLLPQGGVHEAGRHPVHHHREQVL 610
ALRP HA VP DR GEGRH AH L QGGV EA RHPVHHH E L
Sbjct: 208 ALRPHHAGVPQDRRGEGRHCAHHLSQGGVREARRHPVHHHGEPEL 342
Score = 75.8 bits (159), Expect(2) = 5e-026
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = -1 / -2
Query: 600 SR*WCTGCRPASCTPPCGRRWARCRPSPVRSGGTRAC*GRSA 475
S *WCTGCR AS TPPC R WA+CRPSP RS GT A *GRSA
Sbjct: 332 SP*WCTGCRLASRTPPCDR*WAQCRPSPRRS*GTPAW*GRSA 207
Score = 66.6 bits (139), Expect(2) = 5e-026
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = -1 / -2
Query: 861 RSSWTPGT*RRTSSQRGERAMRWPCGGR*SSPGTSATRR*GPP 733
RSSW PG RTSS+ RA RWPCGGR S GTSATRR*G P
Sbjct: 593 RSSWWPGMFCRTSSRGARRARRWPCGGRRS*RGTSATRR*G*P 465
Score = 54.7 bits (113), Expect(3) = 1e-076
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3 / +2
Query: 228 TTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVR 350
T GACGYK + YG T AV L+ +GA CG CYE++
Sbjct: 14 TDGGACGYKGELGKDYGALTAAVGPSLYTNGAGCGACYELK 136
Score = 29.5 bits (58), Expect(3) = 3e-040
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 227 HHGGRVRVQGHARAGVWRADGGR 295
H RVR+QG A G+ RA GGR
Sbjct: 13 HGRRRVRLQGRAGKGLRRAHGGR 81
Score = 28.6 bits (56), Expect(2) = 5e-062
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 291 PPSARHTPARACPCTRTR 238
PP AR +P A PC+RTR
Sbjct: 77 PP*ARRSPFPARPCSRTR 24
Score = 27.2 bits (53), Expect(2) = 8e-050
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3 / -1
Query: 346 TS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 227
+S*H P AP S TA V P L PHAP V
Sbjct: 132 SS*HAPHPAPLV*SDGPTAAVSAP*SFPSSPL*PHAPPSV 13
Score = 23.1 bits (44), Expect(3) = 1e-076
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 375 KPNAATLVVTATDLCPP 425
K + T+VVTAT+ PP
Sbjct: 134 KGSKGTVVVTATNQAPP 184
>gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f244b09, DNA
sequence
Length = 515
Score = 209 bits (450), Expect(2) = 2e-074
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +3 / -2
Query: 117 KPLTPGGRVVHHNHGKFTAGPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAV 296
KPLTPGGRVVHH HGKFTAG K AHATFYGGRDGSGTTAGACGYKDTR++GYGVQTVAV
Sbjct: 436 KPLTPGGRVVHHTHGKFTAGEWKRAHATFYGGRDGSGTTAGACGYKDTRSEGYGVQTVAV 257
Query: 297 STVLFGDGAACGGCYEVRCVDSPSGCKPNAATLVVTA 407
S+VLFG+GAACGGCYEVRCVDSP GCKP A A
Sbjct: 256 SSVLFGNGAACGGCYEVRCVDSPDGCKPPGAAAAAAA 146
Score = 186 bits (401), Expect(2) = 1e-067
Identities = 76/95 (80%), Positives = 78/95 (82%)
Frame = -3 / +3
Query: 406 AVTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 227
A + A GLHP GLST RTS* PPQAAP PNST LTATVCTP P RVSLYPHAPAVV
Sbjct: 147 AAAAAAAPGGLHPSGLSTHRTS*QPPQAAPLPNSTELTATVCTP*PSDRVSLYPHAPAVV 326
Query: 226 PDPSRPP*KVAWAGFXGPAVNLPWLWCTTRPPGVR 122
PDPSRPP*KVAWA F PAVNLPW+WCTTRPPGVR
Sbjct: 327 PDPSRPP*KVAWARFHSPAVNLPWVWCTTRPPGVR 431
Score = 113 bits (242), Expect(3) = 2e-048
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = +3 / -2
Query: 363 PSGCKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKA 527
P G AA LVVTAT+LCPPN+Q SADSGGWCNPPREHFDLSMPAFLQIA+EKA
Sbjct: 175 PPGAAAAAAALVVTATNLCPPNEQ*SADSGGWCNPPREHFDLSMPAFLQIAEEKA 11
Score = 107 bits (228), Expect(2) = 3e-041
Identities = 51/87 (58%), Positives = 54/87 (62%)
Frame = -3 / +3
Query: 526 AFSCAIWRNAGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSVAALGLHPLGLSTQR 347
AFS AIWRNAGM RSKCSRGGLHHPPLSAD SLGGHR VAVTTS AA P GL
Sbjct: 12 AFSSAIWRNAGMDRSKCSRGGLHHPPLSADYCSLGGHRFVAVTTSAAAAAAAPGGLHPSG 191
Query: 346 TS*HPPQAAPSPNSTVLTATVCTPYPC 266
S H P + + +T T C
Sbjct: 192 LSTHRTS*QPPQAAPLPNSTELTATVC 272
Score = 93.6 bits (198), Expect(3) = 2e-048
Identities = 39/52 (75%), Positives = 40/52 (76%)
Frame = +2 / -1
Query: 143 GTPQPRQVHGWAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGRE 298
G P PRQVH E RPRDLLRR G VRHHGGRVRVQGHA G+ RADGGRE
Sbjct: 410 GAPHPRQVHRRRVEARPRDLLRRPGRVRHHGGRVRVQGHAVRGLRRADGGRE 255
Score = 92.7 bits (196), Expect(2) = 2e-074
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = +2 / -1
Query: 386 GNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVPPDRTGEG 526
G GGDGD PVPAQR V GQRRVVQPAAGALRP HA VPPDR GEG
Sbjct: 152 GGAGGDGDEPVPAQRAVVGGQRRVVQPAAGALRPVHAGVPPDRGGEG 12
Score = 92.3 bits (195), Expect(2) = 1e-067
Identities = 37/47 (78%), Positives = 37/47 (78%)
Frame = -1 / +1
Query: 525 PSPVRSGGTRAC*GRSAPAAGCTTRRCPRTAGRWAGTGRSPSPPVLP 385
PSP RSGGT A GRSAPAAGCTTRRCP T RWAGTG SPSPP P
Sbjct: 13 PSPPRSGGTPAWTGRSAPAAGCTTRRCPPTTARWAGTGSSPSPPAPP 153
Score = 84.9 bits (179), Expect(4) = 3e-028
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -2 / +2
Query: 524 LLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRHHQ 393
LLL DLEER H +VEVLPRRVAPPAAVR LL+VGRAQV RRHHQ
Sbjct: 14 LLLRDLEERRHGQVEVLPRRVAPPAAVRRLLLVGRAQVRRRHHQ 145
Score = 83.5 bits (176), Expect(2) = 3e-041
Identities = 31/50 (62%), Positives = 33/50 (66%)
Frame = -1 / +1
Query: 291 PPSARHTPARACPCTRTRPPWCRTHPAXXXXXXXRVSXAQP*TCRGCGVP 142
PPSAR +P ACPCTRTRPPWCRT P R S + *TCRGCG P
Sbjct: 262 PPSARRSPRTACPCTRTRPPWCRTRPGRRRRSRGRASTRRR*TCRGCGAP 411
Score = 42.8 bits (87), Expect(4) = 3e-028
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -2 / +2
Query: 206 VEGRVGGFPRPSRELAVVVVYHAPARRQ 123
VEGRVG P ELAV VV+HAPA RQ
Sbjct: 347 VEGRVGALPLAGGELAVGVVHHAPAGRQ 430
Score = 36.3 bits (73), Expect(4) = 3e-028
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +2
Query: 311 EQHRAHGHRLHAI 273
EQHRAHGHRLHA+
Sbjct: 242 EQHRAHGHRLHAV 280
Score = 25.8 bits (50), Expect(3) = 2e-048
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / -3
Query: 289 WP*ARCCS 312
WP*ARCCS
Sbjct: 264 WP*ARCCS 241
Score = 21.7 bits (41), Expect(4) = 3e-028
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / +1
Query: 408 SPSPPVLPRWACTR*G 361
+P PP R ACTR G
Sbjct: 145 APPPPPPRRAACTRRG 192
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 171 bits (369), Expect(3) = 4e-073
Identities = 64/102 (62%), Positives = 79/102 (77%)
Frame = +3 / +2
Query: 372 CKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYR 551
C+P + +++VTAT+ CPPN +D GGWCNPPR HFDL+MP FL IA+ +AGIVP+SYR
Sbjct: 197 CRPGSPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYR 376
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
RV C K GG+R+TI G +YFN+V ITNV GAGDI SVK S
Sbjct: 377 RVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKAS 502
Score = 122 bits (260), Expect(5) = 3e-042
Identities = 57/100 (57%), Positives = 60/100 (60%)
Frame = -3 / -2
Query: 670 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGM 491
FT MSPAP T VI T LKY P+MV R PP F H T R*E GTMPA A+WRN GM
Sbjct: 495 FTLARTMSPAPATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGM 316
Query: 490 LRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSVAALGLH 371
RSKC RGGLH PP S GG + VAVT G H
Sbjct: 315 ARSKCGRGGLHQPPSSEGSA*FGGQKLVAVTRMEGLPGRH 196
Score = 109 bits (232), Expect = 1e-022
Identities = 53/91 (58%), Positives = 58/91 (63%)
Frame = -2 / -1
Query: 671 LHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGH 492
LH DV A +V D+H VEV DG P AA L A HPAVGDG DAG +L D+EE GH
Sbjct: 496 LHARAHDVTRAGHVRDQHQVEVPEAVDGEPHAA*LPAWHPAVGDGDDAGAVLGDVEEHGH 317
Query: 491 AEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
EVEV RVAP A V G VV RA+VG RH
Sbjct: 316 GEVEVRAWRVAPAAVVGGERVVWRAEVGGRH 224
Score = 94.5 bits (200), Expect(3) = 4e-073
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3 / +1
Query: 192 HATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSP 365
HATFYGG D SGT GACGY + +QGYGV A+ST LF +G +CG C+E++C + P
Sbjct: 10 HATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGACFELKCENQP 183
Score = 49.6 bits (102), Expect(3) = 4e-073
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3 / +2
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATS 800
W M RNWGQ WQ+ L ++L+FRV SD R +TS
Sbjct: 512 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRTSTS 622
Score = 37.3 bits (75), Expect(5) = 3e-042
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 364 GLSTQRTS*HPPQAAPSPNSTVLTATVCTPYP 269
G + +S H PQ PS NS VL+A + TPYP
Sbjct: 182 GWFSHLSSKHAPQLRPSLNSAVLSAALFTPYP 87
Score = 31.8 bits (63), Expect(5) = 3e-042
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 247 PHAPAVVPDPSRPP*KVA 194
PHAP +VP+ S PP* VA
Sbjct: 65 PHAPPMVPEASLPP*NVA 12
Score = 29.9 bits (59), Expect(5) = 3e-042
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2 / -1
Query: 794 GLAVVASHHPERQRLAGEVLPGLPHLPPVALHLRPLNA 681
G A +A+ E +RLA E GLP L PV H +P A
Sbjct: 616 GGAAIAAGDAEGERLADEDGVGLPVLAPVPGHGQPPGA 503
Score = 26.3 bits (51), Expect(5) = 3e-042
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1 / -1
Query: 291 PPSARHTPARACPCTRTRPPWC 226
P +R TP +RTR PWC
Sbjct: 109 PRCSRRTPGCTGCHSRTRRPWC 44
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 171 bits (369), Expect(3) = 1e-072
Identities = 64/102 (62%), Positives = 79/102 (77%)
Frame = +3 / +3
Query: 372 CKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYR 551
C+P + +++VTAT+ CPPN +D GGWCNPPR HFDL+MP FL IA+ +AGIVP+SYR
Sbjct: 405 CRPGSPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYR 584
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
RV C K GG+R+TI G +YFN+V ITNV GAGDI SVK S
Sbjct: 585 RVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKAS 710
Score = 122 bits (260), Expect(5) = 3e-041
Identities = 57/100 (57%), Positives = 60/100 (60%)
Frame = -3 / -1
Query: 670 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGM 491
FT MSPAP T VI T LKY P+MV R PP F H T R*E GTMPA A+WRN GM
Sbjct: 703 FTLARTMSPAPATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGM 524
Query: 490 LRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSVAALGLH 371
RSKC RGGLH PP S GG + VAVT G H
Sbjct: 523 ARSKCGRGGLHQPPSSEGSA*FGGQKLVAVTRMEGLPGRH 404
Score = 109 bits (232), Expect = 1e-022
Identities = 53/91 (58%), Positives = 58/91 (63%)
Frame = -2 / -3
Query: 671 LHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGH 492
LH DV A +V D+H VEV DG P AA L A HPAVGDG DAG +L D+EE GH
Sbjct: 704 LHARAHDVTRAGHVRDQHQVEVPEAVDGEPHAA*LPAWHPAVGDGDDAGAVLGDVEEHGH 525
Query: 491 AEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
EVEV RVAP A V G VV RA+VG RH
Sbjct: 524 GEVEVRAWRVAPAAVVGGERVVWRAEVGGRH 432
Score = 97.3 bits (206), Expect(3) = 1e-072
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3 / +3
Query: 159 GKFTAGPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGC 338
G + G + AHATFYGG D SGT GACGY + +QGYGV A+ T LF +G +CG C
Sbjct: 186 GVYGGGGWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALGTALFNEGLSCGAC 365
Query: 339 YEVRCVDSP 365
+E++C + P
Sbjct: 366 FELKCENHP 392
Score = 45.5 bits (93), Expect(3) = 1e-072
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHR 788
W M RNWGQ WQ+ L ++L+FRV SD R
Sbjct: 720 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRR 818
Score = 34.1 bits (68), Expect(5) = 3e-041
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3 / -1
Query: 364 GLSTQRTS*HPPQAAPSPNSTVLTATVCTPYP 269
G + +S H PQ PS NS V +A + TPYP
Sbjct: 391 GWFSHLSSKHAPQLRPSLNSAVPSAALFTPYP 296
Score = 32.7 bits (65), Expect(5) = 3e-041
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / -1
Query: 247 PHAPAVVPDPSRPP*KVAWA 188
PHAP +VP+ S PP* VA A
Sbjct: 274 PHAPPMVPEASLPP*NVACA 215
Score = 29.0 bits (57), Expect(5) = 3e-041
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 788 AVVASHHPERQRLAGEVLPGLPHLPPVALHLRPLNA 681
A +A+ E +RLA E GLP L PV H +P A
Sbjct: 818 AAIAAGDAEGERLADEDGVGLPVLAPVPGHGQPPGA 711
Score = 26.3 bits (51), Expect(5) = 3e-041
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1 / -2
Query: 291 PPSARHTPARACPCTRTRPPWC 226
P +R TP +RTR PWC
Sbjct: 318 PRCSRRTPGCTGCHSRTRRPWC 253
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 171 bits (369), Expect(3) = 5e-072
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +3 / +3
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 357 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 536
Query: 570 QGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
+GGIR+TI G+ YFN+V +TNV GAGD+ +VS+KGS
Sbjct: 537 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 644
Score = 117 bits (250), Expect(2) = 2e-044
Identities = 55/97 (56%), Positives = 60/97 (61%)
Frame = -3 / -3
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 646 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 467
Query: 499 AGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSV 389
AG SKC RGGLH PP S LGG + VAVT V
Sbjct: 466 AGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 356
Score = 115 bits (246), Expect(2) = 3e-028
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -2 / -2
Query: 650 VAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLP 471
V GA +VG +H VEV V DG PD ALL ARHP VGDGHDAG +L DLEE VEV
Sbjct: 617 VPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRA 438
Query: 470 RRVAPPAAVRGLLVVGRAQVGRRH 399
RRVAP A V G VVGRA+VG RH
Sbjct: 437 RRVAPAAVVAGEAVVGRAKVGGRH 366
Score = 109 bits (233), Expect(3) = 5e-072
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +3
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 147 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 326
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 327 DNDGQSCLPGTITVTAT 377
Score = 84.0 bits (177), Expect(2) = 2e-044
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 376 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 197
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 196 DASPPP*NVAWA 161
Score = 79.0 bits (166), Expect(2) = 2e-022
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +2 / +2
Query: 368 RVQAQRGNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVPPDRTGEGRHRAHLL 547
R G+ DG + +PAQ + +RR+VQPAA ALR A +PPDR RHRA L
Sbjct: 335 RAVVPAGHHHRDGHQLLPAQLRPPQRRRRLVQPAAPALRHGAAGLPPDRAVPRRHRARRL 514
Query: 548 PQGGVHEAGRHPVHHHREQVL 610
+G V E GR PVHH R +L
Sbjct: 515 QEGAVREEGRDPVHHQRPLLL 577
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 173 WAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGREH 301
W RPR +LRR VRH+G RV V+ H + GV GG EH
Sbjct: 146 WRLAERPRHVLRRRRRVRHNGRRVWVREHVQHGVRHEHGGAEH 274
Score = 31.3 bits (62), Expect(2) = 3e-028
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 291 PPSARHTPARACPCTRTRPPWCRT 220
PP + TP C T TR P CRT
Sbjct: 264 PPCSCRTPCCTCSRTHTRRPLCRT 193
Score = 30.9 bits (61), Expect(3) = 5e-072
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 690 WTEMKRNWGQVWQT 731
W M RNWGQ WQ+
Sbjct: 654 WQPMSRNWGQNWQS 695
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 150 bits (323), Expect(3) = 7e-071
Identities = 55/85 (64%), Positives = 69/85 (81%)
Frame = +3 / +2
Query: 423 PNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGN 602
P A +GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+
Sbjct: 407 PTTASPATTGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGH 586
Query: 603 KYFNMVTITNVGGAGDIAAVSVKGS 677
YFN+V +TNV GAGD+ +VS+KGS
Sbjct: 587 SYFNLVLVTNVAGAGDVQSVSIKGS 661
Score = 109 bits (233), Expect(3) = 7e-071
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +1
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 163 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 342
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 343 DNDGQSCLPGTITVTAT 393
Score = 107 bits (228), Expect(2) = 2e-041
Identities = 47/80 (58%), Positives = 52/80 (65%)
Frame = -3 / -2
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 663 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 484
Query: 499 AGMLRSKCSRGGLHHPPLSA 440
AG SKC RGGLH PP+ A
Sbjct: 483 AGCAMSKCGRGGLHQPPVVA 424
Score = 84.0 bits (177), Expect(2) = 2e-041
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 392 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 213
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 212 DASPPP*NVAWA 177
Score = 67.0 bits (140), Expect(3) = 7e-023
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 452 RVVQPAAGALRPQHARVPPDRTGEGRHRAHLLPQGGVHEAGRHPVHHHREQVL 610
R+VQPAA ALR A +PPDR RHRA L +G V E GR PVHH R +L
Sbjct: 436 RLVQPAAPALRHGAAGLPPDRAVPRRHRARRLQEGAVREEGRDPVHHQRPLLL 594
Score = 48.3 bits (99), Expect(3) = 7e-071
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3 / +2
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATS 800
W M RNWGQ WQ+ L +SL+F+V SD R TS
Sbjct: 671 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTS 781
Score = 48.3 bits (99), Expect(3) = 7e-023
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 173 WAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGREH 301
W RPR +LRR VRH+G RV V+ H + GV GG EH
Sbjct: 162 WRLAERPRHVLRRRRRVRHNGRRVWVREHVQHGVRHEHGGAEH 290
Score = 31.3 bits (62), Expect(3) = 7e-023
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNP 467
T+ VTAT+ CPPN +D G P
Sbjct: 373 TITVTATNFCPPNYGLPSDDGRLVQP 450
>gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118204, DNA
sequence
Length = 526
Score = 211 bits (456), Expect(2) = 1e-070
Identities = 82/97 (84%), Positives = 86/97 (88%)
Frame = +3 / +3
Query: 117 KPLTPGGRVVHHNHGKFTAGPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAV 296
KPLTPGGRVVHHNHGKFTAG K AHATFYGGRDGSGTTAGACGYKDTR++GYGVQTVAV
Sbjct: 123 KPLTPGGRVVHHNHGKFTAGEWKRAHATFYGGRDGSGTTAGACGYKDTRSEGYGVQTVAV 302
Query: 297 STVLFGDGAACGGCYEVRCVDSPSGCKPNAATLVVTA 407
S+VLFG+GAACGGCYEVRCVDSP GCKP A A
Sbjct: 303 SSVLFGNGAACGGCYEVRCVDSPDGCKPPGAAAAAAA 413
Score = 188 bits (404), Expect(2) = 4e-064
Identities = 77/95 (81%), Positives = 78/95 (82%)
Frame = -3 / -1
Query: 406 AVTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 227
A + A GLHP GLST RTS* PPQAAP PNST LTATVCTP P RVSLYPHAPAVV
Sbjct: 412 AAAAAAAPGGLHPSGLSTHRTS*QPPQAAPLPNSTELTATVCTP*PSDRVSLYPHAPAVV 233
Query: 226 PDPSRPP*KVAWAGFXGPAVNLPWLWCTTRPPGVR 122
PDPSRPP*KVAWA F PAVNLPWLWCTTRPPGVR
Sbjct: 232 PDPSRPP*KVAWARFHSPAVNLPWLWCTTRPPGVR 128
Score = 98.7 bits (209), Expect(3) = 1e-044
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +3 / +3
Query: 363 PSGCKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAF 503
P G AA LVVTAT+LCPPN+Q SADSGGWCNPPREHFDLSMPAF
Sbjct: 384 PPGAAAAAAALVVTATNLCPPNEQ*SADSGGWCNPPREHFDLSMPAF 524
Score = 95.9 bits (203), Expect(3) = 1e-044
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = +2 / +2
Query: 143 GTPQPRQVHGWAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGRE 298
G PQPRQVH E RPRDLLRR G VRHHGGRVRVQGHA G+ RADGGRE
Sbjct: 149 GAPQPRQVHRRRVEARPRDLLRRPGRVRHHGGRVRVQGHAVRGLRRADGGRE 304
Score = 92.7 bits (196), Expect(2) = 7e-037
Identities = 45/80 (56%), Positives = 48/80 (60%)
Frame = -3 / -1
Query: 505 RNAGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSVAALGLHPLGLSTQRTS*HPPQ 326
RNAGM RSKCSRGGLHHPPLSAD SLGGHR VAVTTS AA P GL S H
Sbjct: 526 RNAGMDRSKCSRGGLHHPPLSADYCSLGGHRFVAVTTSAAAAAAAPGGLHPSGLSTHRTS 347
Query: 325 AAPSPNSTVLTATVCTPYPC 266
P + + +T T C
Sbjct: 346 *QPPQAAPLPNSTELTATVC 287
Score = 83.5 bits (176), Expect(2) = 7e-037
Identities = 31/50 (62%), Positives = 33/50 (66%)
Frame = -1 / -2
Query: 291 PPSARHTPARACPCTRTRPPWCRTHPAXXXXXXXRVSXAQP*TCRGCGVP 142
PPSAR +P ACPCTRTRPPWCRT P R S + *TCRGCG P
Sbjct: 297 PPSARRSPRTACPCTRTRPPWCRTRPGRRRRSRGRASTRRR*TCRGCGAP 148
Score = 79.4 bits (167), Expect(2) = 4e-064
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 504 GTRAC*GRSAPAAGCTTRRCPRTAGRWAGTGRSPSPPVLP 385
GT A GRSAPAAGCTTRRCP+T RWAGTG SPSPP P
Sbjct: 525 GTPAWTGRSAPAAGCTTRRCPQTTARWAGTGSSPSPPAPP 406
Score = 77.1 bits (162), Expect(2) = 1e-070
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +2 / +2
Query: 386 GNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVP 505
G GGDGD PVPAQR V GQRRVVQPAAGALRP HA VP
Sbjct: 407 GGAGGDGDEPVPAQRAVVCGQRRVVQPAAGALRPVHAGVP 526
Score = 73.9 bits (155), Expect(4) = 6e-026
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -2 / -3
Query: 503 ERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRHHQ 393
ER H +VEVLPRRVAPPAAVR LL+VGRAQV RRHHQ
Sbjct: 524 ERRHGQVEVLPRRVAPPAAVRRLLLVGRAQVRRRHHQ 414
Score = 46.0 bits (94), Expect(4) = 6e-026
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -2 / -3
Query: 206 VEGRVGGFPRPSRELAVVVVYHAPARRQ 123
VEGRVG P ELAVVVV+HAPA RQ
Sbjct: 212 VEGRVGALPLAGGELAVVVVHHAPAGRQ 129
Score = 36.3 bits (73), Expect(4) = 6e-026
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / -3
Query: 311 EQHRAHGHRLHAI 273
EQHRAHGHRLHA+
Sbjct: 317 EQHRAHGHRLHAV 279
Score = 25.8 bits (50), Expect(3) = 1e-044
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 289 WP*ARCCS 312
WP*ARCCS
Sbjct: 295 WP*ARCCS 318
Score = 21.7 bits (41), Expect(4) = 6e-026
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -2
Query: 408 SPSPPVLPRWACTR*G 361
+P PP R ACTR G
Sbjct: 414 APPPPPPRRAACTRRG 367
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 163 bits (350), Expect(3) = 4e-067
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +3 / +2
Query: 381 NAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVA 560
+ +++V+TAT+ CPPN +D+GGWCNPPR HFDLSMPAFL+IA +A IVP++YRRVA
Sbjct: 437 SVSSVVITATNFCPPNYALPSDAGGWCNPPRHHFDLSMPAFLRIADYRASIVPVTYRRVA 616
Query: 561 CTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
C K GGIR+ + G +YFN+V I+NVGGAGD+ +VK S
Sbjct: 617 CRKSGGIRFGVNGFRYFNLVLISNVGGAGDVVRAAVKAS 733
Score = 127 bits (271), Expect(3) = 9e-042
Identities = 56/85 (65%), Positives = 61/85 (71%)
Frame = -2 / -3
Query: 650 VAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLP 471
VAGAA+V D H VEV D PDAA L ARHP V DGHDAG ++CD EE H EVEV+
Sbjct: 706 VAGAAHVADEHQVEVAEAVDAEPDAAGLAARHPPVCDGHDAGAVVCDAEEGRHGEVEVVA 527
Query: 470 RRVAPPAAVRGLLVVGRAQVGRRHH 396
RRVAPPA VRG VVGRA+VG R H
Sbjct: 526 RRVAPPAGVRGQRVVGRAEVGGRDH 452
Score = 78.5 bits (165), Expect(3) = 4e-067
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +2
Query: 189 AHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
A T YGG D SGT GACGY + GYG+ T A+ST LF +G CG C+E++C
Sbjct: 230 ATMTMYGGSDASGTMGGACGYGNLYIAGYGMATGALSTPLFNNGLTCGACFEIKC 394
Score = 54.2 bits (112), Expect(3) = 4e-067
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3 / +2
Query: 675 SKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWH 806
+ +W + RNWGQ WQ L +L+FRV TSD R TSW+
Sbjct: 728 ASHTEWLPLARNWGQNWQCSSILVGGALSFRVTTSDRRTLTSWN 859
Score = 47.3 bits (97), Expect(3) = 9e-042
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -3 / -1
Query: 331 PQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP 206
PQ +P S VL+A V PYP YP AP +VPD S PP
Sbjct: 372 PQVSPLLKSGVLSAPVAMPYPAM*RLPYPQAPPMVPDASLPP 247
Score = 36.3 bits (73), Expect(3) = 9e-042
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -3 / -1
Query: 808 TCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVH 689
T EV +R SLV+TR S R C CPQLR H
Sbjct: 861 TFQEVRVRRSLVVTRKESAPPTRMELHCQFCPQLRARGSH 742
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 169 bits (363), Expect(2) = 5e-067
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +3 / +2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 374 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 553
Query: 570 QGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
+GGIR+TI G+ Y N+V +TNV GAGD+ +VS+KGS
Sbjct: 554 KGGIRFTINGHSYINLVLVTNVAGAGDVQSVSIKGS 661
Score = 114 bits (244), Expect(2) = 7e-028
Identities = 53/84 (63%), Positives = 58/84 (69%)
Frame = -2 / -1
Query: 650 VAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLP 471
V GA +VG +H V+V V DG PD ALL ARHP VGDGHDAG +L DLEE VEV
Sbjct: 634 VPGAGHVGHQHQVDVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRA 455
Query: 470 RRVAPPAAVRGLLVVGRAQVGRRH 399
RRVAP A V G VVGRA+VG RH
Sbjct: 454 RRVAPAAVVAGEAVVGRAEVGGRH 383
Score = 114 bits (244), Expect(2) = 5e-043
Identities = 54/97 (55%), Positives = 59/97 (60%)
Frame = -3 / -2
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L P +T SPAP TLV T L +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 663 LEPLMETDCTSPAPATLVTSTRLM*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 484
Query: 499 AGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSV 389
AG SKC RGGLH PP S LGG + VAVT V
Sbjct: 483 AGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 373
Score = 107 bits (229), Expect(2) = 5e-067
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +3 / +2
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT G CGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 164 GGWQSAHATFYGGGDASGTMGGVCGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 343
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 344 DNDGQSCLPGTITVTAT 394
Score = 82.2 bits (173), Expect(2) = 5e-043
Identities = 37/72 (51%), Positives = 43/72 (59%)
Frame = -3 / -2
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPH P +VP
Sbjct: 393 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHTPPIVP 214
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 213 DASPPP*NVAWA 178
Score = 78.0 bits (164), Expect(2) = 5e-022
Identities = 37/77 (48%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 368 RVQAQRGNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVPPDRTGEGRHRAHLL 547
R G+ DG + +PAQ + +RR+VQPAA ALR A +PPDR RHRA L
Sbjct: 352 RAVVPAGHHHRDGHQLLPAQLRPPQRRRRLVQPAAPALRHGAAGLPPDRAVPRRHRARRL 531
Query: 548 PQGGVHEAGRHPVHHHR 598
+G V E GR PVHH R
Sbjct: 532 QEGAVREEGRDPVHHQR 582
Score = 48.3 bits (99), Expect(2) = 5e-022
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 173 WAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGREH 301
W RPR +LRR VRH+G RV V+ H + GV GG EH
Sbjct: 163 WRLAERPRHVLRRRRRVRHNGRRVWVREHVQHGVRHEHGGAEH 291
Score = 31.3 bits (62), Expect(2) = 7e-028
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1 / -3
Query: 291 PPSARHTPARACPCTRTRPPWCRT 220
PP + TP C T TR P CRT
Sbjct: 281 PPCSCRTPCCTCSRTHTRRPLCRT 210
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 202 bits (435), Expect(2) = 6e-063
Identities = 76/156 (48%), Positives = 105/156 (67%)
Frame = +3 / +3
Query: 210 GRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGCKPNAA 389
G + + T GACGY + + GYG T A+S +F GAACG CY+V+C S
Sbjct: 3 GANAADTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGV 182
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+LCP + Q ++ GGWCNPPR+HFD+S P++ +I GIVP+ Y+RV+C++
Sbjct: 183 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 362
Query: 570 QGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
GG+R+TI GN+YF +V I NV G G I+AV +KGS
Sbjct: 363 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGS 470
Score = 85.8 bits (181), Expect(3) = 1e-028
Identities = 39/75 (52%), Positives = 44/75 (58%)
Frame = -3 / -1
Query: 673 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAG 494
P TA M P P TL + T LKYL P+MV R PP TL *+ GTMP I+ + G
Sbjct: 466 PLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDG 287
Query: 493 MLRSKCSRGGLHHPP 449
SKC RGGLHHPP
Sbjct: 286 WDMSKCCRGGLHHPP 242
Score = 61.1 bits (127), Expect(2) = 6e-063
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3 / +3
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 860
W M RNWG WQ DLT +S++FRV ++ R ++V ++W+ G T+ +NF
Sbjct: 480 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQNF 650
Score = 57.4 bits (119), Expect(3) = 1e-028
Identities = 30/65 (46%), Positives = 34/65 (52%)
Frame = -3 / -1
Query: 421 GHRSVAVTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPH 242
GHR VAVT +V H L + T *H P AAP N L+A V PYP YPH
Sbjct: 214 GHRLVAVTVTVTPGLHHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPH 35
Query: 241 APAVV 227
AP +V
Sbjct: 34 APPIV 20
Score = 23.1 bits (44), Expect(3) = 1e-028
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3 / -1
Query: 778 LVITRNVSDSQVRSSPVCHTCPQLRFISVH 689
+ +TR VRS C PQ R + +H
Sbjct: 568 VAVTRKEMLCLVRSLLACQLAPQFRDMVIH 479
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 151 bits (324), Expect(2) = 3e-062
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 379 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 558
Query: 570 QGGIRYTITGNKYFNMVTITNVGG 641
+GGIR+TI G+ YFN+V +TNV G
Sbjct: 559 KGGIRFTINGHSYFNLVLVTNVAG 630
Score = 111 bits (238), Expect(2) = 9e-043
Identities = 52/81 (64%), Positives = 56/81 (69%)
Frame = -2 / -3
Query: 641 AAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRV 462
A +VG +H VEV V DG PD ALL ARHP VGDGHDAG +L DLEE VEV RRV
Sbjct: 630 AGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRARRV 451
Query: 461 APPAAVRGLLVVGRAQVGRRH 399
AP A V G VVGRA+VG RH
Sbjct: 450 APAAVVAGEAVVGRAEVGGRH 388
Score = 109 bits (233), Expect(2) = 3e-062
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +1
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 169 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 348
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 349 DNDGQSCLPGTITVTAT 399
Score = 107 bits (228), Expect(2) = 1e-025
Identities = 50/85 (58%), Positives = 54/85 (63%)
Frame = -3 / -1
Query: 643 APPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGMLRSKCSRGG 464
AP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR AG SKC RGG
Sbjct: 632 APATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGG 453
Query: 463 LHHPPLSADCWSLGGHRSVAVTTSV 389
LH PP S LGG + VAVT V
Sbjct: 452 LHQPPSSLGRP*LGGQKLVAVTVMV 378
Score = 84.0 bits (177), Expect(2) = 9e-043
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -1
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 398 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 219
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 218 DASPPP*NVAWA 183
Score = 79.0 bits (166), Expect(2) = 2e-022
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +2 / +3
Query: 368 RVQAQRGNTGGDGDRPVPAQRPAVRGQRRVVQPAAGALRPQHARVPPDRTGEGRHRAHLL 547
R G+ DG + +PAQ + +RR+VQPAA ALR A +PPDR RHRA L
Sbjct: 357 RAVVPAGHHHRDGHQLLPAQLRPPQRRRRLVQPAAPALRHGAAGLPPDRAVPRRHRARRL 536
Query: 548 PQGGVHEAGRHPVHHHREQVL 610
+G V E GR PVHH R +L
Sbjct: 537 QEGAVREEGRDPVHHQRPLLL 599
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 173 WAXETRPRDLLRRAGWVRHHGGRVRVQGHARAGVWRADGGREH 301
W RPR +LRR VRH+G RV V+ H + GV GG EH
Sbjct: 168 WRLAERPRHVLRRRRRVRHNGRRVWVREHVQHGVRHEHGGAEH 296
Score = 31.3 bits (62), Expect(2) = 1e-025
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1 / -2
Query: 291 PPSARHTPARACPCTRTRPPWCRT 220
PP + TP C T TR P CRT
Sbjct: 286 PPCSCRTPCCTCSRTHTRRPLCRT 215
>gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 5', mRNA sequence
Length = 744
Score = 218 bits (470), Expect(2) = 1e-060
Identities = 82/161 (50%), Positives = 111/161 (68%)
Frame = +3 / +3
Query: 195 ATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGC 374
ATFYGG + +GT GACGY + + GYG T A+S +F GAACG CY+V+C S
Sbjct: 180 ATFYGGANAAGTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRW 359
Query: 375 KPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRR 554
T+ VTAT+LCP + Q ++ GGWCNPPR+HFD+S P++ +I GIVP+ Y+R
Sbjct: 360 CKPGVTVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQR 539
Query: 555 VACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
V+C++ GG+R+TI GN+YF +V I NV G G I+AV +KGS
Sbjct: 540 VSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGS 662
Score = 85.8 bits (181), Expect(2) = 2e-030
Identities = 39/75 (52%), Positives = 44/75 (58%)
Frame = -3 / -3
Query: 673 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAG 494
P TA M P P TL + T LKYL P+MV R PP TL *+ GTMP I+ + G
Sbjct: 658 PLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDG 479
Query: 493 MLRSKCSRGGLHHPP 449
SKC RGGLHHPP
Sbjct: 478 WDMSKCCRGGLHHPP 434
Score = 68.4 bits (143), Expect(2) = 2e-030
Identities = 36/76 (47%), Positives = 40/76 (52%)
Frame = -3 / -3
Query: 421 GHRSVAVTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPH 242
GHR VAVT +V H L + T *H P AAP N L+A V PYP YPH
Sbjct: 406 GHRLVAVTVTVTPGLHHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPH 227
Query: 241 APAVVPDPSRPP*KVA 194
AP +VP PP* VA
Sbjct: 226 APPIVPAALAPP*NVA 179
Score = 37.3 bits (75), Expect(2) = 1e-060
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 690 WTEMKRNWGQVWQTGEDLTCESLT 761
W M RNWG WQ DLT +S++
Sbjct: 672 WITMSRNWGANWQANSDLTRQSIS 743
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 199 bits (430), Expect(2) = 2e-060
Identities = 75/149 (50%), Positives = 102/149 (68%)
Frame = +3 / +1
Query: 231 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGCKPNAATLVVTAT 410
T GACGY + + GYG T A+S +F GAACG CY+V+C S T+ VTAT
Sbjct: 34 TGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGVTVTVTAT 213
Query: 411 DLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYT 590
+LCP + Q ++ GGWCNPPR+HFD+S P++ +I GIVP+ Y+RV+C++ GG+R+T
Sbjct: 214 NLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFT 393
Query: 591 ITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
I GN+YF +V I NV G G I+AV +KGS
Sbjct: 394 INGNRYFKLVLIFNVAGPGSISAVQIKGS 480
Score = 85.8 bits (181), Expect(3) = 3e-028
Identities = 39/75 (52%), Positives = 44/75 (58%)
Frame = -3 / -3
Query: 673 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAG 494
P TA M P P TL + T LKYL P+MV R PP TL *+ GTMP I+ + G
Sbjct: 476 PLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDG 297
Query: 493 MLRSKCSRGGLHHPP 449
SKC RGGLHHPP
Sbjct: 296 WDMSKCCRGGLHHPP 252
Score = 56.1 bits (116), Expect(3) = 3e-028
Identities = 30/64 (46%), Positives = 33/64 (51%)
Frame = -3 / -3
Query: 421 GHRSVAVTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPH 242
GHR VAVT +V H L + T *H P AAP N L+A V PYP YPH
Sbjct: 224 GHRLVAVTVTVTPGLHHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPH 45
Query: 241 APAV 230
AP V
Sbjct: 44 APPV 33
Score = 55.1 bits (114), Expect(2) = 2e-060
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3 / +1
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVT 839
W M RNWG WQ DLT +S++FRV ++ R ++V ++W+ G T
Sbjct: 490 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQT 639
Score = 23.1 bits (44), Expect(3) = 3e-028
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3 / -3
Query: 778 LVITRNVSDSQVRSSPVCHTCPQLRFISVH 689
+ +TR VRS C PQ R + +H
Sbjct: 578 VAVTRKEMLCLVRSLLACQLAPQFRDMVIH 489
>gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 5', mRNA sequence
Length = 665
Score = 152 bits (327), Expect(2) = 1e-059
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +3 / +1
Query: 372 CKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYR 551
C+P + +++VTAT+ CPPN +D GGWCNPPR HFDL+MP FL IA+ +AGIVP+SYR
Sbjct: 397 CRPGSPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYR 576
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNV 635
RV C K GG+R+TI G +YFN+V ITNV
Sbjct: 577 RVPCRKSGGVRFTINGFRYFNLVLITNV 660
Score = 110 bits (234), Expect(4) = 3e-035
Identities = 51/90 (56%), Positives = 54/90 (60%)
Frame = -3 / -1
Query: 640 PPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGMLRSKCSRGGL 461
P T VI T LKY P+MV R PP F H T R*E GTMPA A+WRN GM RSKC RGGL
Sbjct: 665 PATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGL 486
Query: 460 HHPPLSADCWSLGGHRSVAVTTSVAALGLH 371
H PP S GG + VAVT G H
Sbjct: 485 HQPPSSEGSA*FGGQKLVAVTRMEGLPGRH 396
Score = 99.6 bits (211), Expect(2) = 1e-059
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +3 / +1
Query: 159 GKFTAGPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGC 338
G + G + AHATFYGG D SGT GACGY + +QGYGV A+ST LF +G +CG C
Sbjct: 178 GVYGGGGWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGAC 357
Query: 339 YEVRCVDSP 365
+E++C + P
Sbjct: 358 FELKCENQP 384
Score = 37.3 bits (75), Expect(4) = 3e-035
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 364 GLSTQRTS*HPPQAAPSPNSTVLTATVCTPYP 269
G + +S H PQ PS NS VL+A + TPYP
Sbjct: 383 GWFSHLSSKHAPQLRPSLNSAVLSAALFTPYP 288
Score = 32.7 bits (65), Expect(4) = 3e-035
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / -1
Query: 247 PHAPAVVPDPSRPP*KVAWA 188
PHAP +VP+ S PP* VA A
Sbjct: 266 PHAPPMVPEASLPP*NVACA 207
Score = 26.3 bits (51), Expect(4) = 3e-035
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1 / -2
Query: 291 PPSARHTPARACPCTRTRPPWC 226
P +R TP +RTR PWC
Sbjct: 310 PRCSRRTPGCTGCHSRTRRPWC 245
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 171 bits (369), Expect(3) = 7e-057
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +3 / +2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 242 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 421
Query: 570 QGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
+GGIR+TI G+ YFN+V +TNV GAGD+ +VS+KGS
Sbjct: 422 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 529
Score = 117 bits (250), Expect(2) = 8e-036
Identities = 55/97 (56%), Positives = 60/97 (61%)
Frame = -3 / -3
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 531 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 352
Query: 499 AGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSV 389
AG SKC RGGLH PP S LGG + VAVT V
Sbjct: 351 AGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 241
Score = 112 bits (239), Expect = 1e-023
Identities = 53/84 (63%), Positives = 57/84 (67%)
Frame = -2 / -2
Query: 650 VAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLP 471
V GA +VG +H VEV V DG PD ALL A HP VGDGHDAG +L DLEE VEV
Sbjct: 502 VPGAGHVGHQHQVEVGVAVDGEPDPALLHAWHPPVGDGHDAGAVLRDLEEGRLRHVEVRA 323
Query: 470 RRVAPPAAVRGLLVVGRAQVGRRH 399
RRVAP A V G VVGRA+VG RH
Sbjct: 322 RRVAPAAVVAGEAVVGRAEVGGRH 251
Score = 57.9 bits (120), Expect(3) = 7e-057
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3 / +2
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVS 299
G + AHATFYGG D SGT GACGY + + GYG TV +
Sbjct: 137 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTITVTAT 262
Score = 55.1 bits (114), Expect(2) = 8e-036
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -3 / -3
Query: 301 VLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 188
++ TV PYP + YPHAP +VPD S PP* VAWA
Sbjct: 264 LVAVTVMVPYPVLYMFPYPHAPPIVPDASPPP*NVAWA 151
Score = 31.8 bits (63), Expect(3) = 7e-057
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 690 WTEMKRNWGQVWQTGEDLTCES 755
W M RNWGQ WQ+ L +S
Sbjct: 539 WQPMSRNWGQNWQSNSLLDGQS 604
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 103 bits (220), Expect(4) = 2e-055
Identities = 35/77 (45%), Positives = 55/77 (71%)
Frame = +3 / -1
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S P++ +I + GI+P+ Y++V C++ GG+R+ I G+ YF +V I
Sbjct: 442 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 263
Query: 627 TNVGGAGDIAAVSVKGS 677
N+GG+G + A VKG+
Sbjct: 262 QNLGGSGSVGAAWVKGT 212
Score = 84.5 bits (178), Expect(4) = 2e-055
Identities = 35/69 (50%), Positives = 41/69 (59%)
Frame = +3 / -1
Query: 204 YGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGCKPN 383
YGG DGSGT GACGY + + GYGV A+S LF DGA+CG CY + C S SG +
Sbjct: 685 YGGSDGSGTMGGACGYGNLYSAGYGVNNAALSQTLFNDGASCGQCYTITCDGSRSGSQYC 506
Query: 384 AATLVVTAT 410
VT T
Sbjct: 505 KPGNTVTVT 479
Score = 69.3 bits (145), Expect(4) = 2e-029
Identities = 32/80 (40%), Positives = 41/80 (51%)
Frame = -3 / +3
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L+P T A P PP ++T K L P M+ R PP H T G MP ++ I+ +
Sbjct: 210 LVPLTQAAPTEPLPPRFWMLTSRK*LEPAMLKRTPPLREHLTCWYSTGMMPPWTTPIFSH 389
Query: 499 AGMLRSKCSRGGLHHPPLSA 440
G SKC R G HHPPL +
Sbjct: 390 DGCDMSKCGRPGPHHPPLGS 449
Score = 61.1 bits (127), Expect(4) = 2e-029
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -3 / +3
Query: 340 *HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP 206
*H P APS NS L+A + TPYP YPHAP +VPDPS PP
Sbjct: 549 *HCPHDAPSLNSVWLSAALLTPYPALYRLPYPHAPPMVPDPSDPP 683
Score = 57.4 bits (119), Expect(4) = 2e-055
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3 / -1
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 860
W +M RNWG WQ LT ++L+F V T+ + +V P W+FG TY ++ F
Sbjct: 202 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 32
Score = 30.9 bits (61), Expect(4) = 2e-029
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2 / +2
Query: 764 ERQRLAGEVLPGLPHLPPVALHLRP 690
E +RLAGE GLP PV HL P
Sbjct: 128 EAERLAGEPREGLPISAPVPRHLDP 202
Score = 29.5 bits (58), Expect(4) = 2e-055
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 390 TLVVTATDLCPPN 428
T+ VTAT+LCPPN
Sbjct: 493 TVTVTATNLCPPN 455
Score = 25.4 bits (49), Expect(4) = 2e-029
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 427 LGGHRSVAVTTSV 389
LGGHR VAVT +V
Sbjct: 456 LGGHRLVAVTVTV 494
>gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 136 bits (291), Expect(4) = 4e-055
Identities = 53/70 (75%), Positives = 64/70 (91%)
Frame = +3 / +3
Query: 474 EHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTITNVGGAGDI 653
EHFDL+MPAFL+I +EKAGIVPI+YR+VAC +QGGIRYTITGN +NMV +TNVGGAGD+
Sbjct: 396 EHFDLTMPAFLKIDEEKAGIVPITYRKVACARQGGIRYTITGNPNYNMVMVTNVGGAGDV 575
Query: 654 AAVSVKGSKR 683
A+SVKG+KR
Sbjct: 576 VALSVKGNKR 605
Score = 134 bits (288), Expect(3) = 1e-041
Identities = 56/71 (78%), Positives = 61/71 (85%)
Frame = -3 / -1
Query: 685 TRLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIW 506
TRLLPFTD+A SPAPPTLV +TML + FPVMVYRMPPC HATLR* MGTMPAFS +I
Sbjct: 607 TRLLPFTDSATTSPAPPTLVTITML*FGFPVMVYRMPPCLAHATLR*VMGTMPAFSSSIL 428
Query: 505 RNAGMLRSKCS 473
RNAGM+RSKCS
Sbjct: 427 RNAGMVRSKCS 395
Score = 117 bits (250), Expect(3) = 5e-031
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = -2 / -3
Query: 683 ALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLE 504
AL LHR R V GAA+VG HHV V VP DGVPDAAL RARH A+GDGH+AGLLL DLE
Sbjct: 605 ALVALHRQRHHVPGAAHVGHHHHVVVRVPRDGVPDAALPRARHLAIGDGHNAGLLLVDLE 426
Query: 503 ERGHAEVEVL 474
ER H EVEVL
Sbjct: 425 ERRHGEVEVL 396
Score = 80.3 bits (169), Expect(3) = 1e-022
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = +2 / +2
Query: 476 ALRPQHARVPPDRTGEGRHRAHLLPQGGVHEAGRHPVHHHREQVL 610
ALRP HA VP DR GEGRH AH L QGGV EA RHPVHHH E L
Sbjct: 398 ALRPHHAGVPQDRRGEGRHCAHHLSQGGVREARRHPVHHHGEPEL 532
Score = 59.7 bits (124), Expect(4) = 4e-055
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +3 / +3
Query: 147 HHNHGKFTAGPXKPAHATFYGGRDGSGTTAG 239
H NHGKF A P HATFYGGRDGSGTT G
Sbjct: 120 HVNHGKFKADPWTDGHATFYGGRDGSGTTDG 212
Score = 54.7 bits (113), Expect(4) = 4e-055
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3 / +3
Query: 228 TTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVR 350
T GACGYK + YG T AV L+ +GA CG CYE++
Sbjct: 204 TDGGACGYKGELGKDYGALTAAVGPSLYTNGAGCGACYELK 326
Score = 51.0 bits (105), Expect(3) = 1e-041
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -3 / -1
Query: 238 PAVVPDPSRPP*KVAWAGFXGPAVNLPWL 152
P+VVPDPSRPP* VA G A+NLPWL
Sbjct: 211 PSVVPDPSRPP*NVACPSVHGSALNLPWL 125
Score = 40.0 bits (81), Expect(3) = 1e-022
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 155 PRQVHGWAXETRPRDLLRRAGWVRHHGGR 241
PRQV G + R RD+LRR VRHHG R
Sbjct: 128 PRQVQGGPVDGRARDVLRRPRRVRHHGRR 214
Score = 33.6 bits (67), Expect(3) = 5e-031
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / -2
Query: 240 RPPWCRTHPAXXXXXXXRVSXAQP*TCRG 154
R PWCRT R S P*TCRG
Sbjct: 213 RRPWCRTRRGRRRTSRARPSTGPP*TCRG 127
Score = 29.5 bits (58), Expect(3) = 1e-022
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 227 HHGGRVRVQGHARAGVWRADGGR 295
H RVR+QG A G+ RA GGR
Sbjct: 203 HGRRRVRLQGRAGKGLRRAHGGR 271
Score = 28.6 bits (56), Expect(3) = 1e-041
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 291 PPSARHTPARACPCTRTR 238
PP AR +P A PC+RTR
Sbjct: 267 PP*ARRSPFPARPCSRTR 214
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3 / -1
Query: 346 TS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 227
+S*H P AP S TA V P L PHAP V
Sbjct: 322 SS*HAPHPAPLV*SDGPTAAVSAP*SFPSSPL*PHAPPSV 203
Score = 23.1 bits (44), Expect(4) = 4e-055
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 375 KPNAATLVVTATDLCPP 425
K + T+VVTAT+ PP
Sbjct: 324 KGSKGTVVVTATNQAPP 374
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 169 bits (363), Expect(2) = 8e-055
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +3 / +2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR H D++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 35 TITVTATNFCPPNYGLPSDDGGWCNPPRPHLDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 214
Query: 570 QGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKGS 677
+GGIR+TI G+ YFN+V +TNV GAGD+ +VS+KGS
Sbjct: 215 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 322
Score = 117 bits (250), Expect = 3e-025
Identities = 55/97 (56%), Positives = 60/97 (61%)
Frame = -3 / -3
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 324 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 145
Query: 499 AGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSV 389
AG SKC RGGLH PP S LGG + VAVT V
Sbjct: 144 AGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 34
Score = 114 bits (244), Expect = 2e-024
Identities = 53/84 (63%), Positives = 58/84 (69%)
Frame = -2 / -2
Query: 650 VAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLP 471
V GA +VG +H VEV V DG PD ALL ARHP VGDGHDAG +L DLEE V+V
Sbjct: 295 VPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLRHVQVRA 116
Query: 470 RRVAPPAAVRGLLVVGRAQVGRRH 399
RRVAP A V G VVGRA+VG RH
Sbjct: 115 RRVAPAAVVAGEAVVGRAEVGGRH 44
Score = 67.0 bits (140), Expect(2) = 8e-055
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 854
W M RNWGQ WQ+ L +SL+F+V SD R TS V PA W+FG T++ ++
Sbjct: 332 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 496
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 141 bits (303), Expect(3) = 4e-054
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +3 / +3
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFL IAQ +AGIVP+++RRV C K
Sbjct: 402 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVK 581
Query: 570 QGGIRYTITGNKYFNMVTITN 632
+GGIR+TI G+ YFN+V +TN
Sbjct: 582 KGGIRFTINGHSYFNLVLVTN 644
Score = 115 bits (245), Expect(2) = 6e-033
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 632 VGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPP 453
VG +H VEV VP DG PDAALL ARH GDGHDAG +L D+EE G VEV PRRVAP
Sbjct: 644 VGHQHQVEVGVPVDGEPDAALLHARHSPEGDGHDAGAVLRDVEEGGLGHVEVRPRRVAPA 465
Query: 452 AAVRGLLVVGRAQVGRRH 399
A V G VVGRA+VG RH
Sbjct: 464 AVVAGEAVVGRAEVGGRH 411
Score = 99.6 bits (211), Expect(2) = 6e-021
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -3 / -1
Query: 634 TLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGMLRSKCSRGGLHH 455
TLV T LK P+MV RMPP F H TL GTMPA CA+WR AG SKC RGGLH
Sbjct: 646 TLVTSTRLK*ECPLMVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQ 467
Query: 454 PPLSADCWSLGGHRSVAVTTSV 389
PP S LGG + VAVT V
Sbjct: 466 PPSSLGRP*LGGQKLVAVTVMV 401
Score = 59.3 bits (123), Expect(3) = 4e-054
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAV 296
G + AHATFYGG D SGT GACGY + + GYG T A+
Sbjct: 191 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAAL 313
Score = 51.5 bits (106), Expect(3) = 4e-054
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3 / +3
Query: 300 TVLFGDGAACGGCYEVRCVDSPSGCKPNAATLVVT 404
T LF DGAACG CYE+RC ++ C P T+ T
Sbjct: 318 TALFNDGAACGSCYELRCDNAGRSCLPGTITVTAT 422
Score = 47.8 bits (98), Expect(2) = 6e-033
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = -3 / -2
Query: 298 LTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 188
L+A V PYP YPHAP +VPD S PP* VA A
Sbjct: 315 LSAAVFVPYPVLYRLPYPHAPPIVPDASPPP*NVACA 205
Score = 23.1 bits (44), Expect(2) = 6e-021
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1 / -3
Query: 291 PPSARHTPARACPCTRTRPPWCRT 220
PP + T TRTR P CRT
Sbjct: 308 PPCSCRTRCCTGCRTRTRRPLCRT 237
>gb|CW464658.1|CW464658 fsbb001f215a12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215a12, DNA
sequence
Length = 278
Score = 210 bits (453), Expect = 3e-053
Identities = 81/91 (89%), Positives = 85/91 (93%)
Frame = +3 / -1
Query: 117 KPLTPGGRVVHHNHGKFTAGPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAV 296
KPLTPGGRVVHHNHGKFTAG K AHATFYGGRDGSGTTAGACGYKDTR++GYGVQTVAV
Sbjct: 275 KPLTPGGRVVHHNHGKFTAGEWKRAHATFYGGRDGSGTTAGACGYKDTRSEGYGVQTVAV 96
Query: 297 STVLFGDGAACGGCYEVRCVDSPSGCKPNAA 389
S+VLFG+GAACGGCYEVRCVDSP GCKP A
Sbjct: 95 SSVLFGNGAACGGCYEVRCVDSPDGCKPPGA 3
Score = 186 bits (400), Expect = 6e-046
Identities = 75/86 (87%), Positives = 75/86 (87%)
Frame = -3 / +1
Query: 379 GLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*K 200
GLHP GLST RTS* PPQAAP PNST LTATVCTP P RVSLYPHAPAVVPDPSRPP*K
Sbjct: 13 GLHPSGLSTHRTS*QPPQAAPLPNSTELTATVCTP*PSDRVSLYPHAPAVVPDPSRPP*K 192
Query: 199 VAWAGFXGPAVNLPWLWCTTRPPGVR 122
VAWA F PAVNLPWLWCTTRPPGVR
Sbjct: 193 VAWARFHSPAVNLPWLWCTTRPPGVR 270
Score = 83.5 bits (176), Expect(3) = 5e-023
Identities = 31/50 (62%), Positives = 33/50 (66%)
Frame = -1 / +2
Query: 291 PPSARHTPARACPCTRTRPPWCRTHPAXXXXXXXRVSXAQP*TCRGCGVP 142
PPSAR +P ACPCTRTRPPWCRT P R S + *TCRGCG P
Sbjct: 101 PPSARRSPRTACPCTRTRPPWCRTRPGRRRRSRGRASTRRR*TCRGCGAP 250
Score = 36.3 bits (73), Expect(3) = 5e-023
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +3
Query: 311 EQHRAHGHRLHAI 273
EQHRAHGHRLHA+
Sbjct: 81 EQHRAHGHRLHAV 119
Score = 27.2 bits (53), Expect(3) = 5e-023
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 468 AGCTTRRCPRTAGR 427
A CT R CPRTA R
Sbjct: 11 AACTRRGCPRTAPR 52
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 121 bits (259), Expect(2) = 9e-053
Identities = 44/68 (64%), Positives = 56/68 (82%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D+GGWCNPPR HFD++ PAFL IAQ +AGIVP+++RRV C K
Sbjct: 403 TITVTATNFCPPNYGLPSDNGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVK 582
Query: 570 QGGIRYTI 593
+GGIR+TI
Sbjct: 583 KGGIRFTI 606
Score = 107 bits (229), Expect(2) = 9e-053
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +3 / +1
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CY++RC
Sbjct: 193 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYKLRC 372
Query: 354 VDSPSGCKPNAATLVVT 404
++ C P T+ T
Sbjct: 373 DNAGRSCLPGTITVTAT 423
Score = 99.1 bits (210), Expect(2) = 4e-035
Identities = 44/65 (67%), Positives = 47/65 (72%)
Frame = -2 / -2
Query: 593 DGVPDAALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQ 414
DG PDAALL ARH GDGHDAG +L D+EE G VEV PRRVAP A V G VVGRA+
Sbjct: 606 DGEPDAALLHARHSPEGDGHDAGAVLRDVEEGGLGHVEVRPRRVAPAAVVAGEAVVGRAE 427
Query: 413 VGRRH 399
VG RH
Sbjct: 426 VGGRH 412
Score = 71.2 bits (149), Expect(2) = 4e-035
Identities = 35/72 (48%), Positives = 40/72 (55%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H + R+ * P AAPS NS VL+A V PYP YPHAP +VP
Sbjct: 422 VAVTVMVPGRHDRPALSHRSL*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPYPHAPPIVP 243
Query: 223 DPSRPP*KVAWA 188
D S PP* VA A
Sbjct: 242 DASPPP*NVACA 207
>gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 5', mRNA sequence
Length = 816
Score = 106 bits (227), Expect(4) = 3e-051
Identities = 37/78 (47%), Positives = 56/78 (71%)
Frame = +3 / +3
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V I
Sbjct: 447 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 626
Query: 627 TNVGGAGDIAAVSVKGSK 680
N+GG+G + A VKG K
Sbjct: 627 QNLGGSGSVGAAWVKGDK 680
Score = 83.5 bits (176), Expect(4) = 3e-051
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = +3 / +3
Query: 195 ATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSG 371
ATFYGG D SGT GACGY + GYGV A+ LF DGA+CG CY + C S SG
Sbjct: 195 ATFYGGVDASGTMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCDTSRSG 371
Score = 64.3 bits (134), Expect(3) = 1e-023
Identities = 32/80 (40%), Positives = 38/80 (47%)
Frame = -3 / -3
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L PFT A P PP ++T KY P + R PP H T GT PA + +
Sbjct: 679 LSPFTHAAPTEPLPPRFWMLTSRKYWEPARLKRTPPVREHLTCWYRTGTTPAL*MPMCSH 500
Query: 499 AGMLRSKCSRGGLHHPPLSA 440
AG SK R G HHPPL +
Sbjct: 499 AGCDMSKWGRPGPHHPPLGS 440
Score = 62.0 bits (129), Expect(3) = 1e-023
Identities = 30/59 (50%), Positives = 34/59 (57%)
Frame = -3 / -3
Query: 370 PLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVA 194
PL +Q *H P APS N +A + TPYP YPHAP +VPD S PP*KVA
Sbjct: 370 PLRDVSQVMR*HCPHDAPSLNKVGPSAALFTPYPALYRLSYPHAPPIVPDASTPP*KVA 194
Score = 43.7 bits (89), Expect(4) = 3e-051
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3 / +3
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 815
W +M RNWG WQ L + L+F V T+ + W+V+P
Sbjct: 687 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVP 812
Score = 26.7 bits (52), Expect(4) = 3e-051
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 409 PTCARPTTSSP 441
PTCARPTT P
Sbjct: 415 PTCARPTTRCP 447
Score = 23.1 bits (44), Expect(3) = 1e-023
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 440 GLLVVGRAQVGRRH 399
G VVGRAQVG H
Sbjct: 446 GQRVVGRAQVGGGH 405
>gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221289, DNA
sequence
Length = 616
Score = 150 bits (322), Expect(2) = 1e-050
Identities = 54/100 (54%), Positives = 75/100 (75%)
Frame = +3 / +1
Query: 372 CKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYR 551
C + ++ VTAT+LCPPN Q ++GGWCNPPR HFDLS PAF+++AQ +AGIVP+ YR
Sbjct: 181 CYAGSPSITVTATNLCPPNWAQDTNNGGWCNPPRTHFDLSKPAFMKMAQWRAGIVPVMYR 360
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVK 671
RV C ++GG+R+ + GN Y+ + + NVGGAGD+ + VK
Sbjct: 361 RVPCVRRGGLRFALQGNPYWLLAYVMNVGGAGDVVEMWVK 480
Score = 100 bits (214), Expect(2) = 1e-029
Identities = 46/91 (50%), Positives = 52/91 (57%)
Frame = -3 / -3
Query: 670 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGM 491
FT + SPAPPT + + FP R PP T R GT+PA CAI+ AG+
Sbjct: 479 FTHISTTSPAPPTFITYASSQ*GFPWSANRRPPLRTQGTRRYMTGTIPARHCAIFMKAGL 300
Query: 490 LRSKCSRGGLHHPPLSADCWSLGGHRSVAVT 398
RSK RGGLHHPPL C LGGHR VAVT
Sbjct: 299 ERSKWVRGGLHHPPLLVSCAQLGGHRLVAVT 207
Score = 71.6 bits (150), Expect(2) = 1e-050
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +3 / +1
Query: 231 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSP 365
T GACGY + A GYG T A+ST LF DG CG CY++RC SP
Sbjct: 43 TGGACGYGNLYATGYGTDTAALSTTLFKDGHGCGTCYQIRCTGSP 177
Score = 51.0 bits (105), Expect(2) = 1e-029
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -3
Query: 364 GLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAV 230
G R *H PQ PS NS VL+A V PYP A YPHAP V
Sbjct: 176 GEPVHRIW*HVPQPCPSLNSVVLSAAVSVPYPVAYRLPYPHAPPV 42
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 111 bits (236), Expect(2) = 4e-050
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +3 / +3
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 360 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 539
Query: 570 Q 572
+
Sbjct: 540 K 542
Score = 109 bits (233), Expect(2) = 4e-050
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +3
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 150 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 329
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 330 DNDGQSCLPGTITVTAT 380
Score = 84.9 bits (179), Expect(2) = 1e-034
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = -2 / -1
Query: 572 LLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
LL ARHP VGDGHDAG +L DLEE VEV RRVAP A V G VVGRA+VG RH
Sbjct: 542 LLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRARRVAPAAVVAGEAVVGRAEVGGRH 369
Score = 84.0 bits (177), Expect(2) = 1e-034
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -2
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 379 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 200
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 199 DASPPP*NVAWA 164
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 111 bits (236), Expect(2) = 4e-050
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +3 / +3
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 357 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 536
Query: 570 Q 572
+
Sbjct: 537 K 539
Score = 109 bits (233), Expect(2) = 4e-050
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +3
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 147 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 326
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 327 DNDGQSCLPGTITVTAT 377
Score = 84.9 bits (179), Expect(2) = 1e-034
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = -2 / -1
Query: 572 LLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
LL ARHP VGDGHDAG +L DLEE VEV RRVAP A V G VVGRA+VG RH
Sbjct: 539 LLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRARRVAPAAVVAGEAVVGRAEVGGRH 366
Score = 84.0 bits (177), Expect(2) = 1e-034
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -2
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 376 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 197
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 196 DASPPP*NVAWA 161
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 113 bits (242), Expect(2) = 5e-050
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +3 / +2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C K
Sbjct: 359 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 538
Query: 570 QG 575
+G
Sbjct: 539 KG 544
Score = 106 bits (226), Expect(2) = 5e-050
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +3 / +2
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF GAACG CYE+RC
Sbjct: 149 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNGGAACGSCYELRC 328
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 329 DNDGQSCLPGTITVTAT 379
Score = 86.8 bits (183), Expect(2) = 1e-034
Identities = 40/59 (67%), Positives = 42/59 (71%)
Frame = -2 / -2
Query: 575 ALLRARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
ALL ARHP VGDGHDAG +L DLEE VEV RRVAP A V G VVGRA+VG RH
Sbjct: 544 ALLHARHPPVGDGHDAGAVLRDLEEGRLRHVEVRARRVAPAAVVAGEAVVGRAEVGGRH 368
Score = 81.7 bits (172), Expect(2) = 1e-034
Identities = 37/72 (51%), Positives = 43/72 (59%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAP NS VL+A V PYP + YPHAP +VP
Sbjct: 378 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPPLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 199
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 198 DASPPP*NVAWA 163
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 109 bits (233), Expect(2) = 2e-049
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +2
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 161 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 340
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 341 DNDGQSCLPGTITVTAT 391
Score = 108 bits (230), Expect(2) = 2e-049
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = +3 / +2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVAC 563
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRRV C
Sbjct: 371 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPC 544
Score = 84.0 bits (177), Expect(2) = 1e-033
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 390 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 211
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 210 DASPPP*NVAWA 175
Score = 81.3 bits (171), Expect(2) = 1e-033
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = -2 / -2
Query: 563 ARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
ARHP VGDGHDAG +L DLEE VEV RRVAP A V G VVGRA+VG RH
Sbjct: 544 ARHPPVGDGHDAGAVLRDLEEGRLRHVEVRARRVAPAAVVAGEAVVGRAEVGGRH 380
>gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11198028, DNA
sequence
Length = 626
Score = 196 bits (423), Expect = 4e-049
Identities = 72/139 (51%), Positives = 102/139 (73%)
Frame = +3 / -3
Query: 444 DSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVT 623
D+ GWCN PR HFD+S PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VT
Sbjct: 621 DANGWCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVT 442
Query: 624 ITNVGGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSW 803
ITNVGGAG +AA + G+ W M RNWG+ WQ+G +LT ++L+F+V T D + +
Sbjct: 441 ITNVGGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVAD 262
Query: 804 HVLPADWKFGVTYQASKNF 860
+V PA+W+FG TYQAS NF
Sbjct: 261 NVAPANWQFGSTYQASVNF 205
Score = 111 bits (238), Expect = 1e-023
Identities = 60/141 (42%), Positives = 73/141 (51%)
Frame = -3 / +2
Query: 862 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 683
*K +AW V PN Q AG T S V T N VR +P+C PQLR ++
Sbjct: 203 *KLTEAW*VLPNCQFAGATLSATTTLPSSVCTLNDRAFPVRLAPLCQFSPQLRLMASQSV 382
Query: 682 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWR 503
+P AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ +
Sbjct: 383 PPVPMIHAAATAPAPPTLVMVTRSK*SCPLMANLIPPDLWHDTLR*LTGITPAWYTPMVS 562
Query: 502 NAGMLRSKCSRGGLHHPPLSA 440
AG SKC RG LHHP S+
Sbjct: 563 QAGCDMSKCRRGELHHPLASS 625
Score = 96.8 bits (205), Expect(2) = 2e-021
Identities = 57/118 (48%), Positives = 65/118 (55%)
Frame = -2 / +1
Query: 863 LEVLGRLVRDAELPVSGENVP*GGLAVVASHHPERQRLAGEVLPGLPHLPPVALHLRPLN 684
+EV LV AELPV +V V H ERQ L GEV LP LPPVA H +P+
Sbjct: 202 VEVDRGLVGAAELPVRRRHVIRHDDLAVVRLHLERQGLPGEVGSALPVLPPVAAHGQPVR 381
Query: 683 ALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCD 510
A R AGAA VGD VEV+VP DG PD A AR+P V DG+ AGL+ D
Sbjct: 382 AAGAHDPRRGHRAGAADVGDGDKVEVVVPADGEPDPAGPLARYPPVVDGYYAGLVHAD 555
Score = 27.2 bits (53), Expect(2) = 2e-021
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 485 VEVLPRRVAPPAAV 444
VEV PRRVAPP V
Sbjct: 580 VEVPPRRVAPPVGV 621
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 109 bits (233), Expect(2) = 1e-048
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +3 / +1
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 154 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 333
Query: 354 VDSPSGCKPNAATLVVT 404
+ C P T+ T
Sbjct: 334 DNDGQSCLPGTITVTAT 384
Score = 105 bits (225), Expect(2) = 1e-048
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVAC 563
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YR V C
Sbjct: 364 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYREVPC 537
Score = 84.0 bits (177), Expect(2) = 3e-032
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP +VP
Sbjct: 383 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 204
Query: 223 DPSRPP*KVAWA 188
D S PP* VAWA
Sbjct: 203 DASPPP*NVAWA 168
Score = 76.7 bits (161), Expect(2) = 3e-032
Identities = 36/55 (65%), Positives = 38/55 (69%)
Frame = -2 / -2
Query: 563 ARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
ARH VGDGHDAG +L DLEE VEV RRVAP A V G VVGRA+VG RH
Sbjct: 537 ARHLPVGDGHDAGAVLRDLEEGRLRHVEVRARRVAPAAVVAGEAVVGRAEVGGRH 373
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 111 bits (236), Expect(4) = 1e-048
Identities = 40/78 (51%), Positives = 57/78 (73%)
Frame = +3 / -2
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S PA+ I +AGI+P+ Y++V CT+ GG+R++I G++YF +V I
Sbjct: 408 NGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNI 229
Query: 627 TNVGGAGDIAAVSVKGSK 680
NVGG+G + A VKG K
Sbjct: 228 QNVGGSGAVGAAWVKGDK 175
Score = 79.9 bits (168), Expect(3) = 1e-021
Identities = 36/80 (45%), Positives = 44/80 (55%)
Frame = -3 / +2
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L PFT A +P PPT ++T KY P M+ R PP VH T G MPA + + +
Sbjct: 176 LSPFTQAAPTAPLPPTFWMLTSRKYWEPAMLKRTPPVRVHLTCWYRTGMMPACTTPMCSH 355
Query: 499 AGMLRSKCSRGGLHHPPLSA 440
AG SKC R G HHPPL +
Sbjct: 356 AGCDMSKCGRPGPHHPPLGS 415
Score = 58.3 bits (121), Expect(4) = 1e-048
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +3 / -2
Query: 237 GACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSG 371
GACGY + GYG+ A+S LF +GA+CG CY + C S SG
Sbjct: 618 GACGYGNLYNAGYGINNAALSQTLFNNGASCGQCYLITCDRSRSG 484
Score = 55.6 bits (115), Expect(4) = 1e-048
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3 / -2
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKN 857
W +M RNWG WQ L + L+F V T+ + +V+P W+FG+T+ ++N
Sbjct: 168 WIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTFGTNRN 1
Score = 37.3 bits (75), Expect(3) = 1e-021
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -3 / +2
Query: 340 *HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAP 236
*H P AP NS L+A + PYP YPHAP
Sbjct: 515 *HCPHDAPLLNSVWLSAALLMPYPALYRLPYPHAP 619
Score = 26.7 bits (52), Expect(4) = 1e-048
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 387 ATLVVTATDLCPPN 428
+++ V+AT+LCPPN
Sbjct: 462 SSITVSATNLCPPN 421
Score = 25.4 bits (49), Expect(3) = 1e-021
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 431 VVGRAQVGRRH 399
VVGRAQVG RH
Sbjct: 418 VVGRAQVGGRH 450
>gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 194 bits (419), Expect = 2e-048
Identities = 72/139 (51%), Positives = 101/139 (72%)
Frame = +3 / +3
Query: 444 DSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVT 623
D+ GWCN PR HFD+S PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VT
Sbjct: 27 DANGWCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVT 206
Query: 624 ITNVGGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSW 803
ITNVGGAG +AA + G+ W M RNWG+ WQ+G LT ++L+F+V T D + +
Sbjct: 207 ITNVGGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGAYLTGKALSFKVQTDDGKVVVAD 386
Query: 804 HVLPADWKFGVTYQASKNF 860
+V PA+W+FG TYQAS NF
Sbjct: 387 NVAPANWQFGSTYQASVNF 443
Score = 116 bits (248), Expect = 6e-025
Identities = 69/140 (49%), Positives = 77/140 (55%)
Frame = -2 / -2
Query: 863 LEVLGRLVRDAELPVSGENVP*GGLAVVASHHPERQRLAGEVLPGLPHLPPVALHLRPLN 684
+EV LV AELPV +V V H ERQ L+GEV LP LPPVA H +P+
Sbjct: 446 VEVDRGLVGAAELPVRRRHVIRHDDLAVVRLHLERQGLSGEVGSALPVLPPVAAHGQPVR 267
Query: 683 ALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCDLE 504
A R AGAA VGD VEV+VP DG PD A AR P V DG+ AGL+ D
Sbjct: 266 AAGAHDPRRGHRAGAADVGDGDKVEVVVPADGEPDPAGPLARDPPVVDGYYAGLVHADGL 87
Query: 503 ERGHAEVEVLPRRVAPPAAV 444
R VEV PRRVAPP V
Sbjct: 86 PRRLRHVEVPPRRVAPPVGV 27
Score = 110 bits (235), Expect = 4e-023
Identities = 60/141 (42%), Positives = 74/141 (52%)
Frame = -3 / -3
Query: 862 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 683
*K +AW V PN Q AG T S V T N VR +P+C PQLR ++
Sbjct: 445 *KLTEAW*VLPNCQFAGATLSATTTLPSSVCTLNDRAFPVR*APLCQFSPQLRLMASQSV 266
Query: 682 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWR 503
+P AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ +
Sbjct: 265 PPVPMIHAAATAPAPPTLVMVTRSK*SCPLMANLIPPDRWHETLR*LTGITPAWYTPMVS 86
Query: 502 NAGMLRSKCSRGGLHHPPLSA 440
+AG SKC RG LHHP S+
Sbjct: 85 HAGCDMSKCRRGELHHPLASS 23
>gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 111 bits (236), Expect(2) = 5e-048
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +3 / +2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTK 569
++VVTAT+ CPPN+ +D GGWCNPPR HFD+S P F +IA +AGIVP+SYRRVAC K
Sbjct: 263 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 442
Query: 570 QG 575
+G
Sbjct: 443 KG 448
Score = 102 bits (217), Expect(2) = 5e-048
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = +3 / +2
Query: 150 HNHGKFTAGPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAAC 329
H H G AHATFYGG D SGT GACGY + +QGYG T A+ST LF G +C
Sbjct: 20 HGHAPLGGGAWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSC 199
Query: 330 GGCYEVRC 353
G C+EVRC
Sbjct: 200 GACFEVRC 223
Score = 71.6 bits (150), Expect(2) = 1e-025
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = -1 / -3
Query: 573 PASCTPPCGRRWARCRPSPVRSGGTRAC*GRSAPAAGCTTRRCPRTAGRWAGTGRSPSP 397
P+ CT PCGRR +CRP R GTRA RS AGCT+RR R A W G PSP
Sbjct: 446 PSCCTRPCGRRRGQCRPCRARCAGTRAATCRSGRGAGCTSRRRRRGARCWEGRSWWPSP 270
Score = 66.6 bits (139), Expect(2) = 1e-025
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -3 / -2
Query: 370 PLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAW 191
P ++QRTS PQ P S VL+A V PYP YPHAP +VPD S PP*KVA
Sbjct: 240 PPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPYPHAPPMVPDASPPP*KVA* 61
Query: 190 AGFXGPAVNLPW 155
A P + W
Sbjct: 60 AEDHAPPPSGAW 25
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 109 bits (233), Expect(2) = 7e-048
Identities = 42/77 (54%), Positives = 50/77 (64%)
Frame = +3 / +1
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 193 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRC 372
Query: 354 VDSPSGCKPNAATLVVT 404
++ C P T+ T
Sbjct: 373 DNAGRSCLPGTITVTAT 423
Score = 103 bits (219), Expect(2) = 7e-048
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVAC 563
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFL IAQ +AGIVP+++RRV C
Sbjct: 403 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPC 576
Score = 81.3 bits (171), Expect(2) = 1e-030
Identities = 36/55 (65%), Positives = 39/55 (70%)
Frame = -2 / -3
Query: 563 ARHPAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
ARH GDGHDAG +L D+EE G VEV PRRVAP A V G VVGRA+VG RH
Sbjct: 576 ARHSPEGDGHDAGAVLRDVEEGGLGHVEVRPRRVAPAAVVAGEAVVGRAEVGGRH 412
Score = 73.9 bits (155), Expect(2) = 1e-030
Identities = 36/72 (50%), Positives = 41/72 (56%)
Frame = -3 / -1
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H + R+S* P AAPS NS VL+A V PYP YPHAP +VP
Sbjct: 422 VAVTVMVPGRHDRPALSHRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPYPHAPPIVP 243
Query: 223 DPSRPP*KVAWA 188
D S PP* VA A
Sbjct: 242 DASPPP*NVACA 207
>gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_D09_A002 5', mRNA sequence
Length = 727
Score = 106 bits (226), Expect(3) = 2e-047
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +3 / +1
Query: 450 GGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTIT 629
GGWCN R HFD++ PAF +I GI+P+ Y+RV C K+GG+R+++ G+ Y N+V +T
Sbjct: 496 GGWCNQHRPHFDMAQPAFEKIGVYSGGIIPVMYKRVPCVKRGGVRFSVNGHDYINLVLVT 675
Query: 630 NVGGAGDIAAVSVKGS 677
NV AG I ++ VK S
Sbjct: 676 NVAAAGSIKSMEVKTS 723
Score = 95.9 bits (203), Expect(3) = 2e-047
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3 / +1
Query: 189 AHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
AHATFYGG D S T GACGY + +QGYG +T A+STVLF DGA+CG CY++ C
Sbjct: 235 AHATFYGGADASDTMGGACGYGNLYSQGYGTRTAALSTVLFNDGASCGQCYKIAC 399
Score = 27.6 bits (54), Expect(3) = 2e-047
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 390 TLVVTATDLCPPN 428
T+ VTAT+ CPPN
Sbjct: 442 TVTVTATNFCPPN 480
>gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889716, DNA
sequence
Length = 581
Score = 191 bits (411), Expect = 2e-047
Identities = 70/138 (50%), Positives = 100/138 (72%)
Frame = +3 / -1
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+ GWCN PR HFD+ PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VTI
Sbjct: 581 ANGWCNSPRRHFDMLQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTI 402
Query: 627 TNVGGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWH 806
TNVGGAG +AA + G+ W M RNWG+ WQ+G +LT ++L+F+V T D + + +
Sbjct: 401 TNVGGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADN 222
Query: 807 VLPADWKFGVTYQASKNF 860
V PA+W+FG TYQAS NF
Sbjct: 221 VAPANWQFGSTYQASVNF 168
Score = 111 bits (238), Expect = 1e-023
Identities = 59/137 (43%), Positives = 71/137 (51%)
Frame = -3 / +1
Query: 862 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 683
*K +AW V PN Q AG T S V T N VR +P+C PQLR ++
Sbjct: 166 *KLTEAW*VLPNCQFAGATLSATTTLPSSVCTLNDRAFPVRLAPLCQFSPQLRLMASQSV 345
Query: 682 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWR 503
+P AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ +
Sbjct: 346 PPVPMIHAAATAPAPPTLVMVTRSK*SCPLMANLIPPDLWHDTLR*LTGITPAWYTPMVS 525
Query: 502 NAGMLRSKCSRGGLHHP 452
AG SKC RG LHHP
Sbjct: 526 QAGCNMSKCRRGELHHP 576
Score = 96.8 bits (205), Expect(2) = 8e-021
Identities = 57/118 (48%), Positives = 65/118 (55%)
Frame = -2 / +3
Query: 863 LEVLGRLVRDAELPVSGENVP*GGLAVVASHHPERQRLAGEVLPGLPHLPPVALHLRPLN 684
+EV LV AELPV +V V H ERQ L GEV LP LPPVA H +P+
Sbjct: 165 VEVDRGLVGAAELPVRRRHVIRHDDLAVVRLHLERQGLPGEVGSALPVLPPVAAHGQPVR 344
Query: 683 ALAPLHRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPAVGDGHDAGLLLCD 510
A R AGAA VGD VEV+VP DG PD A AR+P V DG+ AGL+ D
Sbjct: 345 AAGAHDPRRGHRAGAADVGDGDKVEVVVPADGEPDPAGPLARYPPVVDGYYAGLVHAD 518
Score = 25.4 bits (49), Expect(2) = 8e-021
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 485 VEVLPRRVAPP 453
VEV PRRVAPP
Sbjct: 543 VEVPPRRVAPP 575
>gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 711
Score = 105 bits (223), Expect(4) = 3e-047
Identities = 36/78 (46%), Positives = 56/78 (71%)
Frame = +3 / -2
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S PA+ +I AG++P+ Y++V C++ GG+R+ I G++YF +V I
Sbjct: 512 NGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNI 333
Query: 627 TNVGGAGDIAAVSVKGSK 680
N+GG+G + A VKG +
Sbjct: 332 QNLGGSGSVGAAWVKGDR 279
Score = 64.3 bits (134), Expect(4) = 3e-047
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3 / -2
Query: 681 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 860
R W +M RNWG WQ L + L+F V T+ + W+V+P W+FG TY ++NF
Sbjct: 281 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 102
Score = 48.7 bits (100), Expect(4) = 3e-047
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3 / -2
Query: 249 YKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSG 371
Y + GYGV A+S+ LF DGA+CG CY + C S G
Sbjct: 710 YDNLYNAGYGVNNAALSSTLFNDGASCGQCYLITCDASRPG 588
Score = 29.0 bits (57), Expect(4) = 3e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 409 PTCARPTTSSP 441
PTCARPTT SP
Sbjct: 544 PTCARPTTRSP 512
>gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 704
Score = 105 bits (223), Expect(4) = 4e-047
Identities = 36/78 (46%), Positives = 56/78 (71%)
Frame = +3 / -1
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S PA+ +I AG++P+ Y++V C++ GG+R+ I G++YF +V I
Sbjct: 512 NGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNI 333
Query: 627 TNVGGAGDIAAVSVKGSK 680
N+GG+G + A VKG +
Sbjct: 332 QNLGGSGSVGAAWVKGDR 279
Score = 64.3 bits (134), Expect(4) = 4e-047
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3 / -1
Query: 681 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 860
R W +M RNWG WQ L + L+F V T+ + W+V+P W+FG TY ++NF
Sbjct: 281 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 102
Score = 48.3 bits (99), Expect(4) = 4e-047
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3 / -1
Query: 270 GYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSG 371
GYGV A+S+ LF DGA+CG CY + C S G
Sbjct: 689 GYGVNNAALSSTLFNDGASCGQCYLITCDASRPG 588
Score = 29.0 bits (57), Expect(4) = 4e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 409 PTCARPTTSSP 441
PTCARPTT SP
Sbjct: 544 PTCARPTTRSP 512
>gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f181j14, DNA
sequence
Length = 508
Score = 145 bits (311), Expect(2) = 2e-046
Identities = 52/101 (51%), Positives = 74/101 (73%)
Frame = +3 / +3
Query: 372 CKPNAATLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYR 551
C+ A + V+AT+LCPPN S +GGWCNPPR HFD+S PA+L+I + GI+P+ Y+
Sbjct: 204 CRQGAGPVTVSATNLCPPNYAYSGSNGGWCNPPRAHFDMSQPAWLKIGIYQGGIIPVLYQ 383
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSVKG 674
RV C KQGG+R+TITG ++ +V I+NV G+G +A+ V+G
Sbjct: 384 RVPCVKQGGVRFTITGFNHYELVLISNVAGSGSVASAWVQG 506
Score = 90.0 bits (190), Expect(2) = 4e-021
Identities = 44/94 (46%), Positives = 52/94 (55%)
Frame = -3 / -1
Query: 673 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAG 494
P+T A P P TL + T +L PVMV R PPCF T G MP + I +AG
Sbjct: 505 PWTQALATEPLPATLEMSTSS*WLNPVMVKRTPPCFTQGTRWYSTGMMPPW*MPILSHAG 326
Query: 493 MLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTS 392
SKC+RGGLH PPL + LGGHR VA T +
Sbjct: 325 WDMSKCARGGLHQPPLLPE*A*LGGHRLVAETVT 224
Score = 62.9 bits (131), Expect(2) = 2e-046
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3 / +3
Query: 231 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
+ GACGY + A GYG T A+S VL+ DGA+CG CY++ C
Sbjct: 57 SGGACGYGNLYATGYGQYTAALSQVLYNDGASCGQCYQISC 179
Score = 33.1 bits (66), Expect(2) = 4e-021
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -3 / -1
Query: 340 *HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAP 236
*H P APS T L A V P P A YPHAP
Sbjct: 166 *HCPHDAPSLYRTWLRAAVYCP*PVAYRLPYPHAP 62
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 109 bits (233), Expect(2) = 3e-046
Identities = 42/77 (54%), Positives = 50/77 (64%)
Frame = +3 / +3
Query: 174 GPXKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G + AHATFYGG D SGT GACGY + + GYG T A+ST LF DGAACG CYE+RC
Sbjct: 183 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRC 362
Query: 354 VDSPSGCKPNAATLVVT 404
++ C P T+ T
Sbjct: 363 DNAGRSCLPGTITVTAT 413
Score = 97.7 bits (207), Expect(2) = 3e-046
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3 / +3
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRR 554
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFL IAQ +AGIVP+++RR
Sbjct: 393 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRR 557
Score = 77.1 bits (162), Expect(2) = 2e-029
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = -2 / -2
Query: 554 PAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
P GDGHDAG +L D+EE G VEV PRRVAP A V G VVGRA+VG RH
Sbjct: 557 PPEGDGHDAGAVLRDVEEGGLGHVEVRPRRVAPAAVVAGEAVVGRAEVGGRH 402
Score = 73.9 bits (155), Expect(2) = 2e-029
Identities = 36/72 (50%), Positives = 41/72 (56%)
Frame = -3 / -3
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H + R+S* P AAPS NS VL+A V PYP YPHAP +VP
Sbjct: 412 VAVTVMVPGRHDRPALSHRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPYPHAPPIVP 233
Query: 223 DPSRPP*KVAWA 188
D S PP* VA A
Sbjct: 232 DASPPP*NVACA 197
>gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189567, DNA
sequence
Length = 675
Score = 103 bits (220), Expect(4) = 1e-045
Identities = 35/77 (45%), Positives = 55/77 (71%)
Frame = +3 / -3
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S P++ +I + GI+P+ Y++V C++ GG+R+ I G+ YF +V I
Sbjct: 490 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 311
Query: 627 TNVGGAGDIAAVSVKGS 677
N+GG+G + A VKG+
Sbjct: 310 QNLGGSGSVGAAWVKGT 260
Score = 69.3 bits (145), Expect(4) = 5e-021
Identities = 32/80 (40%), Positives = 41/80 (51%)
Frame = -3 / +3
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L+P T A P PP ++T K L P M+ R PP H T G MP ++ I+ +
Sbjct: 258 LVPLTQAAPTEPLPPRFWMLTSRK*LEPAMLKRTPPLREHLTCWYSTGMMPPWTTPIFSH 437
Query: 499 AGMLRSKCSRGGLHHPPLSA 440
G SKC R G HHPPL +
Sbjct: 438 DGCDMSKCGRPGPHHPPLGS 497
Score = 57.4 bits (119), Expect(4) = 1e-045
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3 / -3
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 860
W +M RNWG WQ LT ++L+F V T+ + +V P W+FG TY ++ F
Sbjct: 250 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 80
Score = 51.0 bits (105), Expect(4) = 1e-045
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +3 / -3
Query: 270 GYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGCKPNAATLVVTAT 410
GYGV A+S LF DGA+CG CY + C S SG + VT T
Sbjct: 667 GYGVTNAALSQTLFNDGASCGQCYTITCDGSRSGSQYCKPGNTVTVT 527
Score = 31.8 bits (63), Expect(4) = 5e-021
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3 / +3
Query: 340 *HPPQAAPSPNSTVLTATVCTPYP 269
*H P APS NS L+A TPYP
Sbjct: 597 *HCPHDAPSLNSVWLSAAFVTPYP 668
Score = 30.9 bits (61), Expect(4) = 5e-021
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2 / +2
Query: 764 ERQRLAGEVLPGLPHLPPVALHLRP 690
E +RLAGE GLP PV HL P
Sbjct: 176 EAERLAGEPREGLPISAPVPRHLDP 250
Score = 29.5 bits (58), Expect(4) = 1e-045
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 390 TLVVTATDLCPPN 428
T+ VTAT+LCPPN
Sbjct: 541 TVTVTATNLCPPN 503
Score = 25.4 bits (49), Expect(4) = 5e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 427 LGGHRSVAVTTSV 389
LGGHR VAVT +V
Sbjct: 504 LGGHRLVAVTVTV 542
>gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186581, DNA
sequence
Length = 562
Score = 119 bits (254), Expect(3) = 2e-045
Identities = 42/72 (58%), Positives = 58/72 (80%)
Frame = +3 / -3
Query: 444 DSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVT 623
D+ GWCN PR HFD+S PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VT
Sbjct: 218 DANGWCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVT 39
Query: 624 ITNVGGAGDIAA 659
ITNVGGAG +AA
Sbjct: 38 ITNVGGAGAVAA 3
Score = 72.5 bits (152), Expect(2) = 4e-023
Identities = 36/73 (49%), Positives = 43/73 (58%)
Frame = -3 / +1
Query: 658 AAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGMLRSK 479
AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ + AG SK
Sbjct: 4 AATAPAPPTLVMVTRSK*SCPLMANLIPPDLWHDTLR*LTGITPAWYTPMVSQAGCDMSK 183
Query: 478 CSRGGLHHPPLSA 440
C RG LHHP S+
Sbjct: 184 CRRGELHHPLASS 222
Score = 68.4 bits (143), Expect(3) = 2e-045
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3 / -3
Query: 237 GACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
G+CGY D + GYG QT A+ST L+GDGA+CG CY V C
Sbjct: 419 GSCGYGDLYSAGYGTQTTALSTALYGDGASCGACYLVTC 303
Score = 57.4 bits (119), Expect(2) = 4e-023
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -3 / +1
Query: 361 LSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAP 236
+++Q T *H PQ APSP S VL+A VC PYP S YPH P
Sbjct: 295 VASQVTR*HAPQEAPSP*SAVLSAVVCVPYPALYRSPYPHDP 420
Score = 35.4 bits (71), Expect(3) = 2e-045
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3 / -3
Query: 372 CKPNAATLVVTATDLCPPN 428
CKP + ++ VTAT+ CPPN
Sbjct: 281 CKPGSPSVTVTATNFCPPN 225
>gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103n01, DNA
sequence
Length = 667
Score = 106 bits (227), Expect(4) = 4e-045
Identities = 37/78 (47%), Positives = 56/78 (71%)
Frame = +3 / -1
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V I
Sbjct: 367 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 188
Query: 627 TNVGGAGDIAAVSVKGSK 680
N+GG+G + A VKG K
Sbjct: 187 QNLGGSGSVGAAWVKGDK 134
Score = 62.5 bits (130), Expect(4) = 4e-045
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 231 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSG 371
T GACGY + GYGV A+ LF DGA+CG CY + C S SG
Sbjct: 583 TGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCDTSRSG 443
Score = 43.7 bits (89), Expect(4) = 4e-045
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3 / -1
Query: 690 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 815
W +M RNWG WQ L + L+F V T+ + W+V+P
Sbjct: 127 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVP 2
Score = 26.7 bits (52), Expect(4) = 4e-045
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 409 PTCARPTTSSP 441
PTCARPTT P
Sbjct: 399 PTCARPTTRCP 367
>gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079i10, DNA
sequence
Length = 564
Score = 97.7 bits (207), Expect(3) = 3e-044
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3 / +3
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRR 554
++VVTAT+ CPPN+ +D GGWCNPPR HFD+S P F +IA +AGIVP+SYRR
Sbjct: 168 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 332
Score = 66.1 bits (138), Expect(3) = 3e-044
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 237 GACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRC 353
GACGY + +QGYG T A+ST LF G +CG C+EVRC
Sbjct: 12 GACGYGNLYSQGYGTNTAALSTALFNSGLSCGACFEVRC 128
Score = 63.4 bits (132), Expect(3) = 4e-023
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = -2 / -2
Query: 554 PAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRHHQCCR 384
PAVGDG +AG + D E G VEV RVAP A V G VVGRA+VG RHH R
Sbjct: 332 PAVGDGDNAGPVERDALEHGLRHVEVGAGRVAPAAVVGGERVVGRAEVGGRHHDGAR 162
Score = 58.8 bits (122), Expect(3) = 3e-044
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +3 / +2
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNVGG 641
RVAC K+GGIR+TI G+ YFN+V +TNVGG
Sbjct: 473 RVACNKKGGIRFTINGHSYFNLVLVTNVGG 562
Score = 44.6 bits (91), Expect(3) = 4e-023
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -3 / -1
Query: 643 APPTLVIVTMLKYLFPVMVYRMPPCFVHATLR 548
APPTLV T LK +P++V RMPP +HATL+
Sbjct: 564 APPTLVTSTRLK*EWPLIVNRMPPFLLHATLQ 469
Score = 43.2 bits (88), Expect(3) = 4e-023
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -3 / -3
Query: 370 PLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAP 236
P ++QRTS PQ P S VL+A V PYP YPHAP
Sbjct: 145 PPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPYPHAP 11
>gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899280, DNA
sequence
Length = 685
Score = 179 bits (386), Expect = 6e-044
Identities = 65/150 (43%), Positives = 95/150 (63%)
Frame = +3 / +1
Query: 411 DLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYT 590
+ CPPN +++ GGWCNPPR+HFD++ PA+ +I + GIVP+ +RRV C ++GG+R+T
Sbjct: 1 NFCPPNYALASNGGGWCNPPRQHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFT 180
Query: 591 ITGNKYFNMVTITNVGGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRV 770
++G YF +V +TNV GAG + A+ V+G+ W M RNWG WQ+ L + L+FRV
Sbjct: 181 VSGRDYFELVLVTNVAGAGAVRAMDVRGTSSAGWMPMSRNWGANWQSLAYLNGQGLSFRV 360
Query: 771 MTSDHRKATSWHVLPADWKFGVTYQASKNF 860
D + V+P W FG TY + F
Sbjct: 361 TADDGQTVVFADVVPPSWTFGQTYASRLQF 450
Score = 107 bits (228), Expect = 3e-022
Identities = 52/131 (39%), Positives = 65/131 (49%)
Frame = -3 / -3
Query: 841 YVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLTRLLPFTD 662
YV PN G T + S +TRN S +R + C PQ + +H L+P T
Sbjct: 431 YVCPNVHDGGTTSANTTVCPSSAVTRNESPCPLRYARDCQLAPQFLDMGIHPAELVPLTS 252
Query: 661 TAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRNAGMLRS 482
A +PAP TLV T K P+ V R PP + T R GT+P + I +AG S
Sbjct: 251 MARTAPAPATLVTSTSSK*SLPLTVNRTPPRRLQGTRRNSTGTIPPW*TPIRSHAGCAMS 72
Query: 481 KCSRGGLHHPP 449
KC RGGLHHPP
Sbjct: 71 KCCRGGLHHPP 39
>gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940470, DNA
sequence
Length = 627
Score = 145 bits (312), Expect(2) = 7e-044
Identities = 56/110 (50%), Positives = 74/110 (67%)
Frame = +3 / +3
Query: 237 GACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGCKPNAATLVVTATDL 416
GACGY + GYG T A+S+VLF DGAACG CY V C + S A + VTAT+
Sbjct: 108 GACGYGNLYQAGYGTNTAALSSVLFNDGAACGQCYLVMCDSNASPWCRRGAAVTVTATNF 287
Query: 417 CPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACT 566
CPPN Q ++SGGWCNPPR HFD++ PA+ +I +AGI+P+ Y++ C+
Sbjct: 288 CPPNWAQPSNSGGWCNPPRPHFDMAQPAWERIGVYRAGIIPVLYQQ*ECS 437
Score = 59.7 bits (124), Expect(3) = 9e-027
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = -3 / -3
Query: 538 GTMPAFSCAIWRNAGMLRSKCSRGGLHHPPLSADCWSLGGHRSVAVTTSVA 386
G MPA + AG SKC RGGLH PPL C LGG + VAVT + A
Sbjct: 409 GMMPAL*TPMRSQAGCAMSKCGRGGLHQPPLLLGCAQLGGQKLVAVTVTAA 257
Score = 53.8 bits (111), Expect(2) = 7e-044
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 552 RVACTKQGGIRYTITGNKYFNMVTITNVGGAGDIAAVSV 668
RV C +QGGIR TI G+ +F +V +NV G+G I +VSV
Sbjct: 511 RVTCWRQGGIRITIGGSSFFQLVQFSNVAGSGSIRSVSV 627
Score = 50.6 bits (104), Expect(3) = 9e-027
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -2 / -1
Query: 668 HRHRRDVAGAAYVGDRHHVEVLVPGDGVPDAALLRARHPA 549
HRH D A A +VG+ H +E P DG PD +L ARHPA
Sbjct: 627 HRHGPDGAAAGHVGELHQLEEAGPSDGDPDPSLPPARHPA 508
Score = 49.6 bits (102), Expect(3) = 9e-027
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = -3 / -3
Query: 346 TS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 227
T *H P AAPS NST L+A V PYP YPHAP ++
Sbjct: 217 TR*H*PHAAPSLNSTELSAAVFVPYPAWYRLPYPHAPPII 98
>gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047d01, DNA
sequence
Length = 642
Score = 102 bits (218), Expect(3) = 8e-044
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / -2
Query: 390 TLVVTATDLCPPNDQQSADSGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRR 554
T+ VTAT+ CPPN +D GGWCNPPR HFD++ PAFLQIAQ +AGIVP++YRR
Sbjct: 194 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 30
Score = 81.3 bits (171), Expect(3) = 8e-044
Identities = 31/66 (46%), Positives = 37/66 (56%)
Frame = +3 / -2
Query: 207 GGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSGCKPNA 386
G R GACGY + + GYG T A+ST LF DGAACG CYE+RC + C P
Sbjct: 371 GARSSICHAGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNDGQSCLPGT 192
Query: 387 ATLVVT 404
T+ T
Sbjct: 191 ITVTAT 174
Score = 73.5 bits (154), Expect(2) = 1e-023
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = -2 / +3
Query: 554 PAVGDGHDAGLLLCDLEERGHAEVEVLPRRVAPPAAVRGLLVVGRAQVGRRH 399
P VGDGHDAG +L DLEE VEV RRVAP A V G VVGRA+VG RH
Sbjct: 30 PPVGDGHDAGAVLRDLEEGRLRHVEVRARRVAPAAVVAGEAVVGRAEVGGRH 185
Score = 57.9 bits (120), Expect(2) = 1e-023
Identities = 29/66 (43%), Positives = 34/66 (51%)
Frame = -3 / +1
Query: 403 VTTSVAALGLHPLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 224
V +V G H +QR+S* P AAPS NS VL+A V PYP + YPHAP
Sbjct: 175 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPA*Q 354
Query: 223 DPSRPP 206
R P
Sbjct: 355 IEDRAP 372
Score = 33.6 bits (67), Expect(3) = 8e-044
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 174 GPXKPAHATFYGGRDGSGT 230
G + AHATFYGG D SGT
Sbjct: 528 GGWQSAHATFYGGGDASGT 472
>gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_C11_A002 5', mRNA sequence
Length = 688
Score = 106 bits (227), Expect(3) = 1e-043
Identities = 37/78 (47%), Positives = 56/78 (71%)
Frame = +3 / +3
Query: 447 SGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACTKQGGIRYTITGNKYFNMVTI 626
+GGWC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V I
Sbjct: 435 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 614
Query: 627 TNVGGAGDIAAVSVKGSK 680
N+GG+G + A VKG K
Sbjct: 615 QNLGGSGSVGAAWVKGDK 668
Score = 83.5 bits (176), Expect(3) = 1e-043
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = +3 / +3
Query: 195 ATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGAACGGCYEVRCVDSPSG 371
ATFYGG D SGT GACGY + GYGV A+ LF DGA+CG CY + C S SG
Sbjct: 183 ATFYGGVDASGTMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCDTSRSG 359
Score = 64.3 bits (134), Expect(3) = 1e-023
Identities = 32/80 (40%), Positives = 38/80 (47%)
Frame = -3 / -1
Query: 679 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFVHATLR*EMGTMPAFSCAIWRN 500
L PFT A P PP ++T KY P + R PP H T GT PA + +
Sbjct: 667 LSPFTHAAPTEPLPPRFWMLTSRKYWEPARLKRTPPVREHLTCWYRTGTTPAL*MPMCSH 488
Query: 499 AGMLRSKCSRGGLHHPPLSA 440
AG SK R G HHPPL +
Sbjct: 487 AGCDMSKWGRPGPHHPPLGS 428
Score = 62.0 bits (129), Expect(3) = 1e-023
Identities = 30/59 (50%), Positives = 34/59 (57%)
Frame = -3 / -1
Query: 370 PLGLSTQRTS*HPPQAAPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVA 194
PL +Q *H P APS N +A + TPYP YPHAP +VPD S PP*KVA
Sbjct: 358 PLRDVSQVMR*HCPHDAPSLNKVGPSAALFTPYPALYRLSYPHAPPIVPDASTPP*KVA 182
Score = 26.7 bits (52), Expect(3) = 1e-043
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 409 PTCARPTTSSP 441
PTCARPTT P
Sbjct: 403 PTCARPTTRCP 435
Score = 23.1 bits (44), Expect(3) = 1e-023
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -3
Query: 440 GLLVVGRAQVGRRH 399
G VVGRAQVG H
Sbjct: 434 GQRVVGRAQVGGGH 393
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,397,093,725
Number of Sequences: 832831
Number of extensions: 24955367
Number of successful extensions: 363198
Number of sequences better than 1.0e-020: 160
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 36102140406
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)