TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115097.2.1
(987 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 320 1e-090
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 303 4e-081
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 252 2e-075
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 138 2e-073
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 138 8e-068
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 131 6e-066
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 131 1e-064
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 138 1e-062
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 136 1e-057
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 182 4e-057
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 129 5e-057
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 138 6e-054
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 114 9e-054
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 118 8e-053
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 112 8e-053
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 114 1e-052
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 182 1e-052
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 99 3e-052
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 114 2e-051
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 101 5e-048
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 138 7e-048
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 188 2e-046
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 186 6e-046
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 185 1e-045
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 136 5e-045
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 108 8e-045
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 103 1e-044
gb|CW464658.1|CW464658 fsbb001f215a12k0 Sorghum methylation... 180 3e-044
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 100 2e-043
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 109 3e-043
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 100 1e-042
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 99 2e-042
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 100 6e-042
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 100 8e-042
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 113 8e-042
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 110 7e-041
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 111 9e-041
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 111 9e-041
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 107 1e-040
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 101 2e-040
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 101 2e-040
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 107 2e-040
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 111 6e-040
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 100 1e-039
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 111 3e-039
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 101 1e-038
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 111 2e-038
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 103 2e-038
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 88 2e-038
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 100 4e-038
gb|CL159581.1|CL159581 104_349_10804357_116_31382_181 Sorgh... 72 5e-038
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 159 8e-038
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 108 2e-037
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 157 2e-037
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 105 6e-037
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 111 8e-037
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 103 8e-037
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 100 2e-036
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 100 2e-036
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 100 4e-036
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 152 7e-036
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 66 2e-035
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 73 2e-035
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 150 3e-035
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 149 5e-035
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 77 2e-034
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 79 2e-034
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 88 4e-034
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 101 8e-034
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 87 1e-033
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 111 2e-033
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 96 4e-033
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 79 2e-032
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 93 3e-032
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 105 5e-032
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 100 3e-031
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 99 6e-031
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 65 9e-031
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 134 2e-030
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 134 2e-030
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 134 2e-030
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 69 4e-030
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 89 3e-029
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 69 6e-029
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 67 6e-029
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 111 9e-029
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 90 2e-028
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 100 4e-028
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 77 4e-028
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 77 4e-028
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 74 1e-027
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 103 1e-027
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 74 1e-027
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 74 2e-027
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 83 2e-027
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 74 3e-027
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 100 4e-027
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 100 8e-027
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 111 1e-026
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 73 1e-026
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 81 1e-026
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 74 1e-026
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 74 1e-026
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 74 1e-026
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 75 5e-026
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 71 5e-026
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 71 5e-026
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 94 5e-026
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 98 5e-026
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 69 6e-026
gb|CW421780.1|CW421780 fsbb001f130l24f0 Sorghum methylation... 82 1e-025
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 71 1e-025
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 71 3e-025
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 71 3e-025
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 99 3e-025
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 91 3e-025
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 105 8e-025
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 105 8e-025
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 105 8e-025
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 70 1e-024
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 100 2e-024
gb|CW179534.1|CW179534 104_593_11160150_148_36628_019 Sorgh... 78 2e-024
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 79 2e-024
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 79 2e-024
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 79 2e-024
gb|CW381842.1|CW381842 fsbb001f063g24k0 Sorghum methylation... 113 4e-024
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 71 4e-024
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 71 1e-023
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 99 1e-023
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 107 2e-023
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 111 2e-023
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 111 2e-023
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 111 2e-023
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 111 2e-023
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 107 2e-023
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 82 3e-023
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 110 3e-023
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 67 1e-022
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 106 1e-022
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 73 3e-022
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 65 3e-022
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 107 3e-022
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 107 3e-022
gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorgh... 67 8e-022
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 105 1e-021
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 70 1e-021
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 71 1e-021
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 104 2e-021
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 73 5e-021
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 73 5e-021
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 62 1e-020
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 62 1e-020
gb|CW146462.1|CW146462 104_539_11139005_148_34986_025 Sorgh... 71 1e-020
>gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942159, DNA
sequence
Length = 654
Score = 320 bits (693), Expect(2) = 1e-090
Identities = 124/136 (91%), Positives = 130/136 (95%)
Frame = -1 / -2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPREHFDLSMPAFLQIA+EKAGIVP+SYRRVACA+QGGIRY I GNKYFNMVT+TNV
Sbjct: 566 WCNPPREHFDLSMPAFLQIAEEKAGIVPVSYRRVACARQGGIRYAIAGNKYFNMVTVTNV 387
Query: 525 GGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
GGAGD+AAVSVKGSKRVKWTE+KRNWG VWQTGEDLTCESLTFRVMT DHRKATSWHVLP
Sbjct: 386 GGAGDVAAVSVKGSKRVKWTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLP 207
Query: 345 ADWKFGVTYQASKNF* 298
DWKFGVTYQASKNF*
Sbjct: 206 EDWKFGVTYQASKNF* 159
Score = 294 bits (637), Expect(2) = 5e-082
Identities = 121/136 (88%), Positives = 123/136 (90%)
Frame = +2 / +1
Query: 299 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 478
*KFLDAWYVTPNFQS+GRTCH+VALRWS VIT NVSDSQVRSSPVCHT PQLRF SVHLT
Sbjct: 160 *KFLDAWYVTPNFQSSGRTCHDVALRWSPVITLNVSDSQVRSSPVCHTTPQLRFSSVHLT 339
Query: 479 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWR 658
RLLPFTDTAA SPAPPTLV VTMLKYLFP M YRMPPC AHAT R*E GTMPAFS AIWR
Sbjct: 340 RLLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWR 519
Query: 659 NAGMLRSKCSRGGLHH 706
NAGM RSKCSRGGLHH
Sbjct: 520 NAGMDRSKCSRGGLHH 567
Score = 280 bits (605), Expect = 3e-074
Identities = 119/144 (82%), Positives = 125/144 (86%)
Frame = +1 / +3
Query: 274 KKRRESGYLEVLGCLVRDAELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPV 453
K+ + LEVLG LVRDAELPV GE+VP GLAVVAGHHPERQRLAGEVLPGLPH PPV
Sbjct: 135 KRESDGYSLEVLGRLVRDAELPVLGEDVPRRGLAVVAGHHPERQRLAGEVLPGLPHYPPV 314
Query: 454 ALHLRPLDALAPLHRHRRDVASAAHIGDRHHVEVLVPGDGVPDAALLRARHPAVGDRHDA 633
AL LRPLDALAPLHRHRR VA AAH+GDRHHVEVLVPGDGVPDAAL RARHP VGD HDA
Sbjct: 315 ALQLRPLDALAPLHRHRRHVAGAAHVGDRHHVEVLVPGDGVPDAALPRARHPPVGDGHDA 494
Query: 634 GLLLRDLEERGHAEVEVLPRWLAP 705
GLLLRDLEER H +VEVLPR +AP
Sbjct: 495 GLLLRDLEERRHGQVEVLPRRVAP 566
Score = 273 bits (590), Expect = 4e-072
Identities = 119/160 (74%), Positives = 124/160 (77%)
Frame = +3 / +2
Query: 228 MHVIICMVACGHMQDEEEEGKWLLRSSWMPGT*RRTSSQRGERAMRWPCGGRWSSPGTSA 407
MH + A G +EE E L+RSSW PGT*RRTSS RG RA WPCGGR SSP TSA
Sbjct: 89 MHCMAACDAGGCQVEEEGE*WLLIRSSWTPGT*RRTSSPRGGRATTWPCGGRRSSP*TSA 268
Query: 408 TRR*GPPRSATLAPSCASSPST*RACSPSPTPPRCRQRRPHW*SSPC*STCSR*WCTGCR 587
TRR*GPPRSATL PSCAS+PST*RACSPSPTPP R+RRP W* SPC*STCSR W TGCR
Sbjct: 269 TRR*GPPRSATLPPSCASAPST*RACSPSPTPPPRRRRRPRW*PSPC*STCSRRWRTGCR 448
Query: 588 PASRTPPCGRRSARCRPSLARSGGTRAC*GRSAPAVACTT 707
PASRTPP GRR ARCRPS RSGGT A GRSAPA CTT
Sbjct: 449 PASRTPPAGRRRARCRPSPPRSGGTPAWTGRSAPAAGCTT 568
Score = 270 bits (585), Expect = 2e-071
Identities = 117/163 (71%), Positives = 124/163 (76%)
Frame = -3 / -1
Query: 715 QGPVVQATAGALRPQHARVPPDRAREGRHRADLLPQGGVREAGRHPVHHHREQVLQHGDD 536
Q VVQ AGALRP HA VPPDR EGRHRA LLP GGVREAGRHPV H REQVLQHGD
Sbjct: 576 QRRVVQPAAGALRPVHAGVPPDRGGEGRHRARLLPAGGVREAGRHPVRHRREQVLQHGDG 397
Query: 535 HQCGRRWRHRGGVGEGEQARQVDGDEAQLGASVADRGGPHLRVADVPGDDQRPPQGHLMA 356
HQ GRR R GGVGEGEQARQVDG EAQLG SVADRGGPHLRVADV GDD+RPPQGH++A
Sbjct: 396 HQRGRRRRRGGGVGEGEQARQVDGAEAQLGGSVADRGGPHLRVADVQGDDRRPPQGHVVA 217
Query: 355 RSPR*LEVRRHVPGIQELLXXXXXXXXXSCICPQATMQMITCI 227
R PR LEVRRHVPG+QELL S P A+ + C+
Sbjct: 216 RPPRGLEVRRHVPGVQELLMSSHHSPSSST*QPPASQAAMQCM 88
Score = 95.5 bits (202), Expect(2) = 1e-021
Identities = 45/56 (80%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 440 CGRPGRTSPASR*RSG**PATTARPPHGTFSPLTGSSASRTRHPRTSK*PLSLLFF 273
CGRPGRTSPASR*RSG**PATTARP GT SP TGSSASRTR PRTS SL F
Sbjct: 301 CGRPGRTSPASR*RSG**PATTARPRRGTSSPRTGSSASRTRRPRTSNE*PSLSLF 134
Score = 35.4 bits (71), Expect(2) = 1e-090
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 771 GCKPDAAALVVTVTDLCPPKDQ 706
G AAALVVT T+LCPP +Q
Sbjct: 653 GAAAAAAALVVTATNLCPPNEQ 588
Score = 32.2 bits (64), Expect(2) = 5e-082
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 710 SLGGHRSVTVTTSAAASGLHP 772
SLGGH+ V VTT+AAA+ P
Sbjct: 592 SLGGHKFVAVTTNAAAAAAAP 654
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2 / -3
Query: 614 TAGWXXXXXXXXXXXXXXXXXXTW*RSPMWAA 519
T GW TW*RSP WAA
Sbjct: 475 TGGWRARGRAASGTPSPGTSTSTW*RSPTWAA 380
>gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118204, DNA
sequence
Length = 597
Score = 303 bits (655), Expect = 4e-081
Identities = 119/131 (90%), Positives = 125/131 (95%)
Frame = -1 / -2
Query: 690 REHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNVGGAGD 511
REHFDLSMPAF QIA+EKAGIVP+SYRRVACA+QGGIRY I GNKYFNMVT+TNVGGAGD
Sbjct: 596 REHFDLSMPAFFQIAEEKAGIVPVSYRRVACARQGGIRYAIAGNKYFNMVTVTNVGGAGD 417
Query: 510 IAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKF 331
+AAVSVKGSKRVKWTE+KRNWG VWQTGEDLTCESLTFRVMT DHRKATSWHVLP DWKF
Sbjct: 416 VAAVSVKGSKRVKWTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKF 237
Query: 330 GVTYQASKNF* 298
GVTYQASKNF*
Sbjct: 236 GVTYQASKNF* 204
Score = 278 bits (602), Expect = 8e-074
Identities = 115/131 (87%), Positives = 118/131 (90%)
Frame = +2 / +1
Query: 299 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 478
*KFLDAWYVTPNFQS+GRTCH+VALRWS VIT NVSDSQVRSSPVCHT PQLRF SVHLT
Sbjct: 205 *KFLDAWYVTPNFQSSGRTCHDVALRWSPVITLNVSDSQVRSSPVCHTTPQLRFSSVHLT 384
Query: 479 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWR 658
RLLPFTDTAA SPAPPTLV VTMLKYLFP M YRMPPC AHAT R*E GTMPAFS AIW+
Sbjct: 385 RLLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWK 564
Query: 659 NAGMLRSKCSR 691
NAGM RSKCSR
Sbjct: 565 NAGMDRSKCSR 597
Score = 273 bits (591), Expect = 3e-072
Identities = 116/139 (83%), Positives = 121/139 (87%)
Frame = +1 / +3
Query: 274 KKRRESGYLEVLGCLVRDAELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPV 453
K+ + LEVLG LVRDAELPV GE+VP GLAVVAGHHPERQRLAGEVLPGLPH PPV
Sbjct: 180 KRESDGYSLEVLGRLVRDAELPVLGEDVPRRGLAVVAGHHPERQRLAGEVLPGLPHYPPV 359
Query: 454 ALHLRPLDALAPLHRHRRDVASAAHIGDRHHVEVLVPGDGVPDAALLRARHPAVGDRHDA 633
AL LRPLDALAPLHRHRR VA AAH+GDRHHVEVLVPGDGVPDAAL RARHP VGD HDA
Sbjct: 360 ALQLRPLDALAPLHRHRRHVAGAAHVGDRHHVEVLVPGDGVPDAALPRARHPPVGDGHDA 539
Query: 634 GLLLRDLEERGHAEVEVLP 690
GLLLRDLEER H +VEVLP
Sbjct: 540 GLLLRDLEERRHGQVEVLP 596
Score = 260 bits (562), Expect(2) = 1e-068
Identities = 112/155 (72%), Positives = 119/155 (76%)
Frame = -3 / -1
Query: 691 AGALRPQHARVPPDRAREGRHRADLLPQGGVREAGRHPVHHHREQVLQHGDDHQCGRRWR 512
AGALRP HA V PDR EGRHRA LLP GGVREAGRHPV H REQVLQHGD HQ GRR R
Sbjct: 597 AGALRPVHAGVLPDRGGEGRHRARLLPAGGVREAGRHPVRHRREQVLQHGDGHQRGRRRR 418
Query: 511 HRGGVGEGEQARQVDGDEAQLGASVADRGGPHLRVADVPGDDQRPPQGHLMARSPR*LEV 332
GGVGEGEQARQVDG EAQLG SVADRGGPHLRVADV GDD+RPPQGH++AR PR LEV
Sbjct: 417 RGGGVGEGEQARQVDGAEAQLGGSVADRGGPHLRVADVQGDDRRPPQGHVVARPPRGLEV 238
Query: 331 RRHVPGIQELLXXXXXXXXXSCICPQATMQMITCI 227
RRHVPG+QELL S P A+ + C+
Sbjct: 237 RRHVPGVQELLMSSHHSPSSST*QPPASQAAMQCM 133
Score = 259 bits (559), Expect = 7e-068
Identities = 114/154 (74%), Positives = 119/154 (77%)
Frame = +3 / +2
Query: 228 MHVIICMVACGHMQDEEEEGKWLLRSSWMPGT*RRTSSQRGERAMRWPCGGRWSSPGTSA 407
MH + A G +EE E L+RSSW PGT*RRTSS RG RA WPCGGR SSP TSA
Sbjct: 134 MHCMAACDAGGCQVEEEGE*WLLIRSSWTPGT*RRTSSPRGGRATTWPCGGRRSSP*TSA 313
Query: 408 TRR*GPPRSATLAPSCASSPST*RACSPSPTPPRCRQRRPHW*SSPC*STCSR*WCTGCR 587
TRR*GPPRSATL PSCAS+PST*RACSPSPTPP R+RRP W* SPC*STCSR W TGCR
Sbjct: 314 TRR*GPPRSATLPPSCASAPST*RACSPSPTPPPRRRRRPRW*PSPC*STCSRRWRTGCR 493
Query: 588 PASRTPPCGRRSARCRPSLARSGGTRAC*GRSAP 689
PASRTPP GRR ARCRPS RSG T A GRSAP
Sbjct: 494 PASRTPPAGRRRARCRPSPPRSGRTPAWTGRSAP 595
Score = 95.5 bits (202), Expect(2) = 1e-021
Identities = 45/56 (80%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 440 CGRPGRTSPASR*RSG**PATTARPPHGTFSPLTGSSASRTRHPRTSK*PLSLLFF 273
CGRPGRTSPASR*RSG**PATTARP GT SP TGSSASRTR PRTS SL F
Sbjct: 346 CGRPGRTSPASR*RSG**PATTARPRRGTSSPRTGSSASRTRRPRTSNE*PSLSLF 179
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2 / -3
Query: 614 TAGWXXXXXXXXXXXXXXXXXXTW*RSPMWAA 519
T GW TW*RSP WAA
Sbjct: 520 TGGWRARGRAASGTPSPGTSTSTW*RSPTWAA 425
Score = 22.1 bits (42), Expect(2) = 1e-068
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 163 NQCANSND 140
NQCANSN+
Sbjct: 55 NQCANSNE 32
>gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 252 bits (544), Expect(2) = 2e-075
Identities = 99/130 (76%), Positives = 115/130 (88%)
Frame = -1 / +2
Query: 687 EHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNVGGAGDI 508
EHFDL+MPAFL+I +EKAGIVPI+YR+VACA+QGGIRYTITGN +NMV +TNVGGAGD+
Sbjct: 206 EHFDLTMPAFLKIDEEKAGIVPITYRKVACARQGGIRYTITGNPNYNMVMVTNVGGAGDV 385
Query: 507 AAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 328
A+SVKG+KRVKWT MKR+WGQ+W T +LT ESLTFRVMT DHRKATSWHV P DWK+
Sbjct: 386 VALSVKGNKRVKWTPMKRSWGQLWITEVNLTGESLTFRVMTGDHRKATSWHVAPRDWKYD 565
Query: 327 VTYQASKNF* 298
TYQA+KNF*
Sbjct: 566 KTYQATKNF* 595
Score = 231 bits (498), Expect(2) = 6e-061
Identities = 98/133 (73%), Positives = 109/133 (81%)
Frame = +2 / -1
Query: 290 VAT*KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISV 469
+ +*KFL AWYV FQS G TC EVALRWS V+TRNVSDS VR + V +CPQLRFI V
Sbjct: 603 IRS*KFLVAWYVLSYFQSRGATCQEVALRWSPVMTRNVSDSPVRLTSVIQSCPQLRFIGV 424
Query: 470 HLTRLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCA 649
HLTRLLPFTD+A SPAPPTLV +TML + FPVMVYRMPPC AHATLR* +GTMPAFS +
Sbjct: 423 HLTRLLPFTDSATTSPAPPTLVTITML*FGFPVMVYRMPPCLAHATLR*VMGTMPAFSSS 244
Query: 650 IWRNAGMLRSKCS 688
I RNAGM+RSKCS
Sbjct: 243 ILRNAGMVRSKCS 205
Score = 197 bits (425), Expect = 2e-049
Identities = 87/134 (64%), Positives = 96/134 (71%)
Frame = -3 / +1
Query: 700 QATAGALRPQHARVPPDRAREGRHRADLLPQGGVREAGRHPVHHHREQVLQHGDDHQCGR 521
+A ALRP HA VP DR EGRH A L QGGVREA RHPVHHH E LQHGD Q GR
Sbjct: 193 RAEGRALRPHHAGVPQDRRGEGRHCAHHLSQGGVREARRHPVHHHGEPELQHGDGDQRGR 372
Query: 520 RWRHRGGVGEGEQARQVDGDEAQLGASVADRGGPHLRVADVPGDDQRPPQGHLMARSPR* 341
R G VGEG+QARQVD DEAQLG ++ G PH RVADVP D+RPPQGHL+AR
Sbjct: 373 RRGRGGAVGEGQQARQVDADEAQLGTALDHGGQPHRRVADVPRHDRRPPQGHLLARRAPR 552
Query: 340 LEVRRHVPGIQELL 299
LEVR+++PG QELL
Sbjct: 553 LEVRQNIPGHQELL 594
Score = 193 bits (417), Expect = 3e-048
Identities = 91/140 (65%), Positives = 98/140 (70%)
Frame = +1 / -3
Query: 268 RMKKRRESGYLEVLGCLVRDAELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLP 447
R + + LEVLG LV LPV+G +VP GGLAVVAGH ERQRLAGEV P L
Sbjct: 625 RRGRPEDDPILEVLGGLVCFVVLPVAGRDVPGGGLAVVAGHDAERQRLAGEVDLRDPELS 446
Query: 448 PVALHLRPLDALAPLHRHRRDVASAAHIGDRHHVEVLVPGDGVPDAALLRARHPAVGDRH 627
P ALH RPLDAL LHR R V AAH+G HHV V VP DGVPDAAL RARH A+GD H
Sbjct: 445 PAALHRRPLDALVALHRQRHHVPGAAHVGHHHHVVVRVPRDGVPDAALPRARHLAIGDGH 266
Query: 628 DAGLLLRDLEERGHAEVEVL 687
+AGLLL DLEER H EVEVL
Sbjct: 265 NAGLLLVDLEERRHGEVEVL 206
Score = 186 bits (401), Expect = 4e-046
Identities = 86/129 (66%), Positives = 91/129 (70%)
Frame = +3 / -2
Query: 300 RSSWMPGT*RRTSSQRGERAMRWPCGGRWSSPGTSATRR*GPPRSATLAPSCASSPST*R 479
RSSW PG RTSS+ RA RWPCGGR S GTSATRR*G P + PSCASS ST*R
Sbjct: 593 RSSWWPGMFCRTSSRGARRARRWPCGGRRS*RGTSATRR*G*PP*SRAVPSCASSAST*R 414
Query: 480 ACSPSPTPPRCRQRRPHW*SSPC*STCSR*WCTGCRPASRTPPCGRRSARCRPSLARSGG 659
AC PSPT P +RRP W SPC S+ S *WCTGCR ASRTPPC R A+CRPS RS G
Sbjct: 413 ACCPSPTAPPRPRRRPRWSPSPCCSSGSP*WCTGCRLASRTPPCDR*WAQCRPSPRRS*G 234
Query: 660 TRAC*GRSA 686
T A *GRSA
Sbjct: 233 TPAW*GRSA 207
Score = 52.8 bits (109), Expect(2) = 2e-075
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / +2
Query: 912 TTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
T GACGYK + YG T AV L+ +G CG CYE++
Sbjct: 14 TDGGACGYKGELGKDYGALTAAVGPSLYTNGAGCGACYELK 136
Score = 25.4 bits (49), Expect(2) = 6e-061
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2 / -1
Query: 794 TS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 913
+S*H P P S TA V P L PHAP V
Sbjct: 132 SS*HAPHPAPLV*SDGPTAAVSAP*SFPSSPL*PHAPPSV 13
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 138 bits (297), Expect(3) = 2e-073
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ YFN+V +TNV
Sbjct: 436 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNV 615
Query: 525 GGAGDIAAVSVKGS 484
GAGD+ +VS+KGS
Sbjct: 616 AGAGDVQSVSIKGS 657
Score = 111 bits (236), Expect(3) = 2e-073
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 160 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 339
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 340 DNDGQSCLPGTITVTAT 390
Score = 99.6 bits (211), Expect(3) = 6e-042
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 659 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 480
Query: 662 AGMLRSKCSRGGLH 703
AG SKC RGGLH
Sbjct: 479 AGCAMSKCGRGGLH 438
Score = 79.0 bits (166), Expect(3) = 6e-042
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -2
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 389 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 210
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 209 DASPPP*NVAWA 174
Score = 67.0 bits (140), Expect(3) = 2e-073
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W M RNWGQ WQ+ L +SL+F+V SD R TS V PA W+FG T++ ++
Sbjct: 667 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 831
Score = 32.7 bits (65), Expect(3) = 6e-042
Identities = 23/55 (41%), Positives = 25/55 (45%)
Frame = +1 / -1
Query: 307 LGCLVRDAELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
LG L AELP + G A VAG E + LA E LP L PV H P
Sbjct: 831 LGALEGLAELPARRRDAVAGDGAAVAGGDLEGEALAVEERVALPVLAPVPGHGLP 667
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 138 bits (297), Expect(3) = 8e-068
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ YFN+V +TNV
Sbjct: 440 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNV 619
Query: 525 GGAGDIAAVSVKGS 484
GAGD+ +VS+KGS
Sbjct: 620 AGAGDVQSVSIKGS 661
Score = 111 bits (236), Expect(3) = 8e-068
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 163 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 342
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 343 DNDGQSCLPGTITVTAT 393
Score = 99.6 bits (211), Expect(3) = 1e-040
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 663 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 484
Query: 662 AGMLRSKCSRGGLH 703
AG SKC RGGLH
Sbjct: 483 AGCAMSKCGRGGLH 442
Score = 79.0 bits (166), Expect(3) = 1e-040
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 392 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 213
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 212 DASPPP*NVAWA 177
Score = 48.3 bits (99), Expect(3) = 8e-068
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATS 361
W M RNWGQ WQ+ L +SL+F+V SD R TS
Sbjct: 671 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTS 781
Score = 28.6 bits (56), Expect(3) = 1e-040
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3 / -3
Query: 372 CGGRWSSPGTSATRR*GPPRSATLAPSCASSPST 473
CG RW PG + R G SA+ PS + +T
Sbjct: 770 CGRRWR*PGRRGSGRRGASCSASSGPSSGTWAAT 669
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 131 bits (281), Expect(4) = 6e-066
Identities = 50/74 (67%), Positives = 58/74 (78%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDL+MP FL IA+ +AGIVP+SYRRV C K GG+R+TI G +YFN+V ITNV
Sbjct: 489 WCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLITNV 668
Query: 525 GGAGDIAAVSVKGS 484
GAGDI SVK S
Sbjct: 669 AGAGDIVRASVKAS 710
Score = 105 bits (223), Expect(4) = 3e-034
Identities = 46/71 (64%), Positives = 48/71 (67%)
Frame = +2 / -1
Query: 491 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGM 670
FT MSPAP T VI T LKY P+MV R PP F H T R*E GTMPA A+WRN GM
Sbjct: 703 FTLARTMSPAPATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGM 524
Query: 671 LRSKCSRGGLH 703
RSKC RGGLH
Sbjct: 523 ARSKCGRGGLH 491
Score = 103 bits (219), Expect(4) = 6e-066
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = -1 / +3
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + G W+ AHATFYGG D SGT GACGY + +QGYGV A+ T LF +G +CG C
Sbjct: 186 GVYGGGGWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALGTALFNEGLSCGAC 365
Query: 801 YEVRCVDSP 775
+E++C + P
Sbjct: 366 FELKCENHP 392
Score = 45.5 bits (93), Expect(4) = 6e-066
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHR 373
W M RNWGQ WQ+ L ++L+FRV SD R
Sbjct: 720 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRR 818
Score = 36.8 bits (74), Expect(4) = 3e-034
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 776 GLSTHRTS*HPPQAVPSPNSTVLTATVCTPYP 871
G +H +S H PQ PS NS V +A + TPYP
Sbjct: 391 GWFSHLSSKHAPQLRPSLNSAVPSAALFTPYP 296
Score = 32.7 bits (65), Expect(4) = 3e-034
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
PHAP +VP+ S PP* VA A
Sbjct: 274 PHAPPMVPEASLPP*NVACA 215
Score = 29.9 bits (59), Expect(4) = 6e-066
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 768 CKPDAAALVVTVTDLCPP 715
C+P + +++VT T+ CPP
Sbjct: 405 CRPGSPSILVTATNFCPP 458
Score = 28.1 bits (55), Expect(4) = 3e-034
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1 / -3
Query: 373 AVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A +A E +RLA E GLP L PV H +P
Sbjct: 818 AAIAAGDAEGERLADEDGVGLPVLAPVPGHGQP 720
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 131 bits (281), Expect(4) = 1e-064
Identities = 50/74 (67%), Positives = 58/74 (78%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDL+MP FL IA+ +AGIVP+SYRRV C K GG+R+TI G +YFN+V ITNV
Sbjct: 281 WCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLITNV 460
Query: 525 GGAGDIAAVSVKGS 484
GAGDI SVK S
Sbjct: 461 AGAGDIVRASVKAS 502
Score = 105 bits (223), Expect(4) = 3e-035
Identities = 46/71 (64%), Positives = 48/71 (67%)
Frame = +2 / -2
Query: 491 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGM 670
FT MSPAP T VI T LKY P+MV R PP F H T R*E GTMPA A+WRN GM
Sbjct: 495 FTLARTMSPAPATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGM 316
Query: 671 LRSKCSRGGLH 703
RSKC RGGLH
Sbjct: 315 ARSKCGRGGLH 283
Score = 94.5 bits (200), Expect(4) = 1e-064
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = -1 / +1
Query: 948 HATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSP 775
HATFYGG D SGT GACGY + +QGYGV A+ST LF +G +CG C+E++C + P
Sbjct: 10 HATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGACFELKCENQP 183
Score = 49.6 bits (102), Expect(4) = 1e-064
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATS 361
W M RNWGQ WQ+ L ++L+FRV SD R +TS
Sbjct: 512 WLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRTSTS 622
Score = 40.0 bits (81), Expect(4) = 3e-035
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 776 GLSTHRTS*HPPQAVPSPNSTVLTATVCTPYP 871
G +H +S H PQ PS NS VL+A + TPYP
Sbjct: 182 GWFSHLSSKHAPQLRPSLNSAVLSAALFTPYP 87
Score = 31.8 bits (63), Expect(4) = 3e-035
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / -3
Query: 893 PHAPAVVPDPSRPP*KVA 946
PHAP +VP+ S PP* VA
Sbjct: 65 PHAPPMVPEASLPP*NVA 12
Score = 29.9 bits (59), Expect(4) = 1e-064
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 768 CKPDAAALVVTVTDLCPP 715
C+P + +++VT T+ CPP
Sbjct: 197 CRPGSPSILVTATNFCPP 250
Score = 29.0 bits (57), Expect(4) = 3e-035
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1 / -1
Query: 367 GLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
G A +A E +RLA E GLP L PV H +P
Sbjct: 616 GGAAIAAGDAEGERLADEDGVGLPVLAPVPGHGQP 512
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 138 bits (297), Expect(3) = 1e-062
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ YFN+V +TNV
Sbjct: 423 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNV 602
Query: 525 GGAGDIAAVSVKGS 484
GAGD+ +VS+KGS
Sbjct: 603 AGAGDVQSVSIKGS 644
Score = 111 bits (236), Expect(3) = 1e-062
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +3
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 147 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 326
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 327 DNDGQSCLPGTITVTAT 377
Score = 99.6 bits (211), Expect(2) = 1e-037
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 646 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 467
Query: 662 AGMLRSKCSRGGLH 703
AG SKC RGGLH
Sbjct: 466 AGCAMSKCGRGGLH 425
Score = 79.0 bits (166), Expect(2) = 1e-037
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 376 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 197
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 196 DASPPP*NVAWA 161
Score = 30.9 bits (61), Expect(3) = 1e-062
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQT 430
W M RNWGQ WQ+
Sbjct: 654 WQPMSRNWGQNWQS 695
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 136 bits (291), Expect(2) = 1e-057
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ Y N+V +TNV
Sbjct: 440 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYINLVLVTNV 619
Query: 525 GGAGDIAAVSVKGS 484
GAGD+ +VS+KGS
Sbjct: 620 AGAGDVQSVSIKGS 661
Score = 109 bits (232), Expect(2) = 1e-057
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT G CGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 164 GGWQSAHATFYGGGDASGTMGGVCGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 343
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 344 DNDGQSCLPGTITVTAT 394
Score = 96.8 bits (205), Expect(2) = 3e-036
Identities = 43/74 (58%), Positives = 47/74 (63%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +T SPAP TLV T L +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 663 LEPLMETDCTSPAPATLVTSTRLM*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 484
Query: 662 AGMLRSKCSRGGLH 703
AG SKC RGGLH
Sbjct: 483 AGCAMSKCGRGGLH 442
Score = 77.1 bits (162), Expect(2) = 3e-036
Identities = 34/72 (47%), Positives = 40/72 (55%)
Frame = +2 / -2
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPH P +VP
Sbjct: 393 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHTPPIVP 214
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 213 DASPPP*NVAWA 178
>gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f244b09, DNA
sequence
Length = 515
Score = 182 bits (392), Expect(2) = 4e-057
Identities = 69/79 (87%), Positives = 73/79 (92%)
Frame = -1 / -2
Query: 984 HGKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGG 805
HGKFTAG WK AHATFYGGRDGSGTTAGACGYKDTR++GYGVQTVAVS+VLFG+G ACGG
Sbjct: 397 HGKFTAGEWKRAHATFYGGRDGSGTTAGACGYKDTRSEGYGVQTVAVSSVLFGNGAACGG 218
Query: 804 CYEVRCVDSPSGCKPDAAA 748
CYEVRCVDSP GCKP AA
Sbjct: 217 CYEVRCVDSPDGCKPPGAA 161
Score = 159 bits (342), Expect(2) = 5e-049
Identities = 66/79 (83%), Positives = 67/79 (84%)
Frame = +2 / +3
Query: 746 SAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPS 925
+AA GLHP GLSTHRTS* PPQA P PNST LTATVCTP P RVSLYPHAPAVVPDPS
Sbjct: 159 AAAPGGLHPSGLSTHRTS*QPPQAAPLPNSTELTATVCTP*PSDRVSLYPHAPAVVPDPS 338
Query: 926 RPP*KVAWAGFHGPAVNLP 982
RPP*KVAWA FH PAVNLP
Sbjct: 339 RPP*KVAWARFHSPAVNLP 395
Score = 64.3 bits (134), Expect(4) = 3e-027
Identities = 25/30 (83%), Positives = 25/30 (83%)
Frame = -2 / -3
Query: 851 WP*ARCCSVTARPAAGATRCGAWTALAGAS 762
WP*ARCCS ARPAA ATRCGAWTA GAS
Sbjct: 264 WP*ARCCSAMARPAAVATRCGAWTAPTGAS 175
Score = 61.1 bits (127), Expect(2) = 4e-057
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -1 / -2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKA 634
WC PPREHFDLSMPAFLQIA+EKA
Sbjct: 82 WCNPPREHFDLSMPAFLQIAEEKA 11
Score = 57.0 bits (118), Expect(2) = 5e-049
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 635 AFSCAIWRNAGMLRSKCSRGGLHH 706
AFS AIWRNAGM RSKCSRGGLHH
Sbjct: 12 AFSSAIWRNAGMDRSKCSRGGLHH 83
Score = 43.7 bits (89), Expect(4) = 3e-027
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -3 / -1
Query: 715 QGPVVQATAGALRPQHARVPPDRAREG 635
Q VVQ AGALRP HA VPPDR EG
Sbjct: 92 QRRVVQPAAGALRPVHAGVPPDRGGEG 12
Score = 38.2 bits (77), Expect(4) = 3e-027
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / -2
Query: 777 PSGCKPDAAALVVTVTDLCPPKDQ 706
P G AAALVVT T+LCPP +Q
Sbjct: 175 PPGAAAAAAALVVTATNLCPPNEQ 104
Score = 32.2 bits (64), Expect(4) = 3e-027
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 982 RQVHGRAVETRPRDLL 935
RQVH R VE RPRDLL
Sbjct: 395 RQVHRRRVEARPRDLL 348
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 129 bits (276), Expect(3) = 5e-057
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMPAFL+IA +A IVP++YRRVAC K GGIR+ + G +YFN+V I+NV
Sbjct: 512 WCNPPRHHFDLSMPAFLRIADYRASIVPVTYRRVACRKSGGIRFGVNGFRYFNLVLISNV 691
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ +VK S
Sbjct: 692 GGAGDVVRAAVKAS 733
Score = 81.7 bits (172), Expect(3) = 6e-029
Identities = 37/65 (56%), Positives = 42/65 (64%)
Frame = +1 / -3
Query: 511 VASAAHIGDRHHVEVLVPGDGVPDAALLRARHPAVGDRHDAGLLLRDLEERGHAEVEVLP 690
VA AAH+ D H VEV D PDAA L ARHP V D HDAG ++ D EE H EVEV+
Sbjct: 706 VAGAAHVADEHQVEVAEAVDAEPDAAGLAARHPPVCDGHDAGAVVCDAEEGRHGEVEVVA 527
Query: 691 RWLAP 705
R +AP
Sbjct: 526 RRVAP 512
Score = 78.5 bits (165), Expect(3) = 5e-057
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 951 AHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
A T YGG D SGT GACGY + GYG+ T A+ST LF +G CG C+E++C
Sbjct: 230 ATMTMYGGSDASGTMGGACGYGNLYIAGYGMATGALSTPLFNNGLTCGACFEIKC 394
Score = 54.2 bits (112), Expect(3) = 5e-057
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = -1 / +2
Query: 486 SKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWH 355
+ +W + RNWGQ WQ L +L+FRV TSD R TSW+
Sbjct: 728 ASHTEWLPLARNWGQNWQCSSILVGGALSFRVTTSDRRTLTSWN 859
Score = 49.2 bits (101), Expect(3) = 6e-029
Identities = 24/52 (46%), Positives = 26/52 (50%)
Frame = +2 / -1
Query: 779 LSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP 934
L H S PQ P S VL+A V PYP YP AP +VPD S PP
Sbjct: 402 LQLHLISKQAPQVSPLLKSGVLSAPVAMPYPAM*RLPYPQAPPMVPDASLPP 247
Score = 36.3 bits (73), Expect(3) = 6e-029
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +2 / -1
Query: 353 TCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVH 472
T EV +R SLV+TR S R C CPQLR H
Sbjct: 861 TFQEVRVRRSLVVTRKESAPPTRMELHCQFCPQLRARGSH 742
>gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 138 bits (295), Expect(3) = 6e-054
Identities = 54/70 (77%), Positives = 65/70 (92%)
Frame = -1 / +3
Query: 687 EHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNVGGAGDI 508
EHFDL+MPAFL+I +EKAGIVPI+YR+VACA+QGGIRYTITGN +NMV +TNVGGAGD+
Sbjct: 396 EHFDLTMPAFLKIDEEKAGIVPITYRKVACARQGGIRYTITGNPNYNMVMVTNVGGAGDV 575
Query: 507 AAVSVKGSKR 478
A+SVKG+KR
Sbjct: 576 VALSVKGNKR 605
Score = 134 bits (288), Expect(3) = 4e-041
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +2 / -1
Query: 476 TRLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIW 655
TRLLPFTD+A SPAPPTLV +TML + FPVMVYRMPPC AHATLR* +GTMPAFS +I
Sbjct: 607 TRLLPFTDSATTSPAPPTLVTITML*FGFPVMVYRMPPCLAHATLR*VMGTMPAFSSSIL 428
Query: 656 RNAGMLRSKCS 688
RNAGM+RSKCS
Sbjct: 427 RNAGMVRSKCS 395
Score = 112 bits (239), Expect = 9e-024
Identities = 49/70 (70%), Positives = 52/70 (74%)
Frame = +1 / -3
Query: 478 ALAPLHRHRRDVASAAHIGDRHHVEVLVPGDGVPDAALLRARHPAVGDRHDAGLLLRDLE 657
AL LHR R V AAH+G HHV V VP DGVPDAAL RARH A+GD H+AGLLL DLE
Sbjct: 605 ALVALHRQRHHVPGAAHVGHHHHVVVRVPRDGVPDAALPRARHLAIGDGHNAGLLLVDLE 426
Query: 658 ERGHAEVEVL 687
ER H EVEVL
Sbjct: 425 ERRHGEVEVL 396
Score = 111 bits (236), Expect = 2e-023
Identities = 49/75 (65%), Positives = 51/75 (68%)
Frame = -3 / +2
Query: 700 QATAGALRPQHARVPPDRAREGRHRADLLPQGGVREAGRHPVHHHREQVLQHGDDHQCGR 521
+A ALRP HA VP DR EGRH A L QGGVREA RHPVHHH E LQHGD Q GR
Sbjct: 383 RAEGRALRPHHAGVPQDRRGEGRHCAHHLSQGGVREARRHPVHHHGEPELQHGDGDQRGR 562
Query: 520 RWRHRGGVGEGEQAR 476
R G VGEG+QAR
Sbjct: 563 RRGRGGAVGEGQQAR 607
Score = 106 bits (226), Expect = 6e-022
Identities = 47/70 (67%), Positives = 50/70 (71%)
Frame = +3 / -2
Query: 477 RACSPSPTPPRCRQRRPHW*SSPC*STCSR*WCTGCRPASRTPPCGRRSARCRPSLARSG 656
RAC PSPT P +RRP W SPC S+ S *WCTGCR ASRTPPC R A+CRPS RS
Sbjct: 606 RACCPSPTAPPRPRRRPRWSPSPCCSSGSP*WCTGCRLASRTPPCDR*WAQCRPSPRRS* 427
Query: 657 GTRAC*GRSA 686
GT A *GRSA
Sbjct: 426 GTPAW*GRSA 397
Score = 60.6 bits (126), Expect(3) = 6e-054
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = -1 / +3
Query: 984 HGKFTAGPWKPAHATFYGGRDGSGTTAG 901
HGKF A PW HATFYGGRDGSGTT G
Sbjct: 129 HGKFKADPWTDGHATFYGGRDGSGTTDG 212
Score = 52.8 bits (109), Expect(3) = 6e-054
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / +3
Query: 912 TTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
T GACGYK + YG T AV L+ +G CG CYE++
Sbjct: 204 TDGGACGYKGELGKDYGALTAAVGPSLYTNGAGCGACYELK 326
Score = 48.3 bits (99), Expect(3) = 4e-041
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 902 PAVVPDPSRPP*KVAWAGFHGPAVNLP 982
P+VVPDPSRPP* VA HG A+NLP
Sbjct: 211 PSVVPDPSRPP*NVACPSVHGSALNLP 131
Score = 25.4 bits (49), Expect(3) = 4e-041
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2 / -1
Query: 794 TS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVV 913
+S*H P P S TA V P L PHAP V
Sbjct: 322 SS*HAPHPAPLV*SDGPTAAVSAP*SFPSSPL*PHAPPSV 203
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 114 bits (243), Expect(3) = 9e-054
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR+HFD+S P++ +I GIVP+ Y+RV+C++ GG+R+TI GN+YF +V I NV
Sbjct: 249 WCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNV 428
Query: 525 GGAGDIAAVSVKGS 484
G G I+AV +KGS
Sbjct: 429 AGPGSISAVQIKGS 470
Score = 79.9 bits (168), Expect(3) = 2e-027
Identities = 37/73 (50%), Positives = 42/73 (57%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
P TA M P P TL + T LKYL P+MV R PP TL *+ GTMP I+ + G
Sbjct: 466 PLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDG 287
Query: 668 MLRSKCSRGGLHH 706
SKC RGGLHH
Sbjct: 286 WDMSKCCRGGLHH 248
Score = 75.8 bits (159), Expect(3) = 9e-054
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = -1 / +3
Query: 930 GRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPDAA 751
G + + T GACGY + + GYG T A+S +F G ACG CY+V+C S
Sbjct: 3 GANAADTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGV 182
Query: 750 ALVVTVTDLCP 718
+ VT T+LCP
Sbjct: 183 TVTVTATNLCP 215
Score = 61.1 bits (127), Expect(3) = 9e-054
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
W M RNWG WQ DLT +S++FRV ++ R ++V ++W+ G T+ +NF
Sbjct: 480 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQNF 650
Score = 57.4 bits (119), Expect(3) = 2e-027
Identities = 28/65 (43%), Positives = 32/65 (49%)
Frame = +2 / -1
Query: 719 GHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPH 898
GHR V VT + H L +H T *H P A P N L+A V PYP YPH
Sbjct: 214 GHRLVAVTVTVTPGLHHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPH 35
Query: 899 APAVV 913
AP +V
Sbjct: 34 APPIV 20
Score = 24.4 bits (47), Expect(3) = 2e-027
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1 / -3
Query: 379 VAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
V G E L GEV GLP PV H P
Sbjct: 572 VGGGDTEGDALPGEVAVGLPVGAPVPGHGDP 480
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 118 bits (252), Expect(2) = 8e-053
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ YFN+V +TNV
Sbjct: 445 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNV 624
Query: 525 GG 520
G
Sbjct: 625 AG 630
Score = 111 bits (236), Expect(2) = 8e-053
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 169 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 348
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 349 DNDGQSCLPGTITVTAT 399
Score = 89.5 bits (189), Expect(2) = 1e-034
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = +2 / -1
Query: 518 APPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGG 697
AP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR AG SKC RGG
Sbjct: 632 APATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGG 453
Query: 698 LH 703
LH
Sbjct: 452 LH 447
Score = 79.0 bits (166), Expect(2) = 1e-034
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -1
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 398 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 219
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 218 DASPPP*NVAWA 183
>gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 5', mRNA sequence
Length = 665
Score = 112 bits (239), Expect(3) = 8e-053
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDL+MP FL IA+ +AGIVP+SYRRV C K GG+R+TI G +YFN+V ITNV
Sbjct: 481 WCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLITNV 660
Score = 105 bits (224), Expect(3) = 8e-053
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = -1 / +1
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + G W+ AHATFYGG D SGT GACGY + +QGYGV A+ST LF +G +CG C
Sbjct: 178 GVYGGGGWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGAC 357
Query: 801 YEVRCVDSP 775
+E++C + P
Sbjct: 358 FELKCENQP 384
Score = 93.2 bits (197), Expect(3) = 1e-028
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = +2 / -1
Query: 521 PPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGL 700
P T VI T LKY P+MV R PP F H T R*E GTMPA A+WRN GM RSKC RGGL
Sbjct: 665 PATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGL 486
Query: 701 H 703
H
Sbjct: 485 H 483
Score = 40.0 bits (81), Expect(3) = 1e-028
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2 / -1
Query: 776 GLSTHRTS*HPPQAVPSPNSTVLTATVCTPYP 871
G +H +S H PQ PS NS VL+A + TPYP
Sbjct: 383 GWFSHLSSKHAPQLRPSLNSAVLSAALFTPYP 288
Score = 32.7 bits (65), Expect(3) = 1e-028
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
PHAP +VP+ S PP* VA A
Sbjct: 266 PHAPPMVPEASLPP*NVACA 207
Score = 29.9 bits (59), Expect(3) = 8e-053
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 768 CKPDAAALVVTVTDLCPP 715
C+P + +++VT T+ CPP
Sbjct: 397 CRPGSPSILVTATNFCPP 450
>gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 5', mRNA sequence
Length = 744
Score = 114 bits (243), Expect(3) = 1e-052
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR+HFD+S P++ +I GIVP+ Y+RV+C++ GG+R+TI GN+YF +V I NV
Sbjct: 441 WCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNV 620
Query: 525 GGAGDIAAVSVKGS 484
G G I+AV +KGS
Sbjct: 621 AGPGSISAVQIKGS 662
Score = 95.9 bits (203), Expect(3) = 1e-052
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = -1 / +3
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ ATFYGG + +GT GACGY + + GYG T A+S +F G ACG CY+V+C
Sbjct: 165 WQRGSATFYGGANAAGTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQ 344
Query: 780 SPSGCKPDAAALVVTVTDLCP 718
S + VT T+LCP
Sbjct: 345 QNSRWCKPGVTVTVTATNLCP 407
Score = 79.9 bits (168), Expect(2) = 1e-028
Identities = 37/73 (50%), Positives = 42/73 (57%)
Frame = +2 / -3
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
P TA M P P TL + T LKYL P+MV R PP TL *+ GTMP I+ + G
Sbjct: 658 PLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDG 479
Query: 668 MLRSKCSRGGLHH 706
SKC RGGLHH
Sbjct: 478 WDMSKCCRGGLHH 440
Score = 68.4 bits (143), Expect(2) = 1e-028
Identities = 34/76 (44%), Positives = 38/76 (50%)
Frame = +2 / -3
Query: 719 GHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPH 898
GHR V VT + H L +H T *H P A P N L+A V PYP YPH
Sbjct: 406 GHRLVAVTVTVTPGLHHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPH 227
Query: 899 APAVVPDPSRPP*KVA 946
AP +VP PP* VA
Sbjct: 226 APPIVPAALAPP*NVA 179
Score = 37.3 bits (75), Expect(3) = 1e-052
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLT 400
W M RNWG WQ DLT +S++
Sbjct: 672 WITMSRNWGANWQANSDLTRQSIS 743
>gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118204, DNA
sequence
Length = 526
Score = 182 bits (392), Expect(2) = 1e-052
Identities = 69/79 (87%), Positives = 73/79 (92%)
Frame = -1 / +3
Query: 984 HGKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGG 805
HGKFTAG WK AHATFYGGRDGSGTTAGACGYKDTR++GYGVQTVAVS+VLFG+G ACGG
Sbjct: 162 HGKFTAGEWKRAHATFYGGRDGSGTTAGACGYKDTRSEGYGVQTVAVSSVLFGNGAACGG 341
Query: 804 CYEVRCVDSPSGCKPDAAA 748
CYEVRCVDSP GCKP AA
Sbjct: 342 CYEVRCVDSPDGCKPPGAA 398
Score = 159 bits (342), Expect(2) = 1e-044
Identities = 66/79 (83%), Positives = 67/79 (84%)
Frame = +2 / -1
Query: 746 SAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPS 925
+AA GLHP GLSTHRTS* PPQA P PNST LTATVCTP P RVSLYPHAPAVVPDPS
Sbjct: 400 AAAPGGLHPSGLSTHRTS*QPPQAAPLPNSTELTATVCTP*PSDRVSLYPHAPAVVPDPS 221
Query: 926 RPP*KVAWAGFHGPAVNLP 982
RPP*KVAWA FH PAVNLP
Sbjct: 220 RPP*KVAWARFHSPAVNLP 164
Score = 64.3 bits (134), Expect(4) = 1e-023
Identities = 25/30 (83%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 851 WP*ARCCSVTARPAAGATRCGAWTALAGAS 762
WP*ARCCS ARPAA ATRCGAWTA GAS
Sbjct: 295 WP*ARCCSAMARPAAVATRCGAWTAPTGAS 384
Score = 46.0 bits (94), Expect(2) = 1e-052
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAF 658
WC PPREHFDLSMPAF
Sbjct: 477 WCNPPREHFDLSMPAF 524
Score = 42.3 bits (86), Expect(2) = 1e-044
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / -1
Query: 656 RNAGMLRSKCSRGGLHH 706
RNAGM RSKCSRGGLHH
Sbjct: 526 RNAGMDRSKCSRGGLHH 476
Score = 38.2 bits (77), Expect(4) = 1e-023
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / +3
Query: 777 PSGCKPDAAALVVTVTDLCPPKDQ 706
P G AAALVVT T+LCPP +Q
Sbjct: 384 PPGAAAAAAALVVTATNLCPPNEQ 455
Score = 32.2 bits (64), Expect(4) = 1e-023
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 982 RQVHGRAVETRPRDLL 935
RQVH R VE RPRDLL
Sbjct: 164 RQVHRRRVEARPRDLL 211
Score = 31.3 bits (62), Expect(4) = 1e-023
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / +2
Query: 715 QGPVVQATAGALRPQHARVP 656
Q VVQ AGALRP HA VP
Sbjct: 467 QRRVVQPAAGALRPVHAGVP 526
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 98.7 bits (209), Expect(4) = 3e-052
Identities = 34/78 (43%), Positives = 53/78 (67%)
Frame = -1 / -1
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S P++ +I + GI+P+ Y++V C++ GG+R+ I G+ YF +V
Sbjct: 445 PNGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVN 266
Query: 537 ITNVGGAGDIAAVSVKGS 484
I N+GG+G + A VKG+
Sbjct: 265 IQNLGGSGSVGAAWVKGT 212
Score = 85.4 bits (180), Expect(4) = 3e-052
Identities = 35/69 (50%), Positives = 41/69 (59%)
Frame = -1 / -1
Query: 936 YGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPD 757
YGG DGSGT GACGY + + GYGV A+S LF DG +CG CY + C S SG +
Sbjct: 685 YGGSDGSGTMGGACGYGNLYSAGYGVNNAALSQTLFNDGASCGQCYTITCDGSRSGSQYC 506
Query: 756 AAALVVTVT 730
VTVT
Sbjct: 505 KPGNTVTVT 479
Score = 63.4 bits (132), Expect(3) = 5e-026
Identities = 31/79 (39%), Positives = 39/79 (49%)
Frame = +2 / +3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L+P T A P PP ++T K L P M+ R PP H T G MP ++ I+ +
Sbjct: 210 LVPLTQAAPTEPLPPRFWMLTSRK*LEPAMLKRTPPLREHLTCWYSTGMMPPWTTPIFSH 389
Query: 662 AGMLRSKCSRGGLHHWSLG 718
G SKC R G HH LG
Sbjct: 390 DGCDMSKCGRPGPHHPPLG 446
Score = 60.6 bits (126), Expect(3) = 5e-026
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2 / +3
Query: 785 THRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP 934
+H *H P PS NS L+A + TPYP YPHAP +VPDPS PP
Sbjct: 534 SHVMV*HCPHDAPSLNSVWLSAALLTPYPALYRLPYPHAPPMVPDPSDPP 683
Score = 57.4 bits (119), Expect(4) = 3e-052
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -1 / -1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
W +M RNWG WQ LT ++L+F V T+ + +V P W+FG TY ++ F
Sbjct: 202 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 32
Score = 33.1 bits (66), Expect(3) = 5e-026
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1 / +2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
+ELP +V + G E +RLAGE GLP PV HL P
Sbjct: 59 SELPPRRRHVQELYVLPAGGSDGEAERLAGEPREGLPISAPVPRHLDP 202
Score = 22.6 bits (43), Expect(4) = 3e-052
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 490 VTVTATNLCPP 458
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 114 bits (243), Expect(3) = 2e-051
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR+HFD+S P++ +I GIVP+ Y+RV+C++ GG+R+TI GN+YF +V I NV
Sbjct: 259 WCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNV 438
Query: 525 GGAGDIAAVSVKGS 484
G G I+AV +KGS
Sbjct: 439 AGPGSISAVQIKGS 480
Score = 79.9 bits (168), Expect(3) = 6e-027
Identities = 37/73 (50%), Positives = 42/73 (57%)
Frame = +2 / -3
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
P TA M P P TL + T LKYL P+MV R PP TL *+ GTMP I+ + G
Sbjct: 476 PLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDG 297
Query: 668 MLRSKCSRGGLHH 706
SKC RGGLHH
Sbjct: 296 WDMSKCCRGGLHH 258
Score = 73.5 bits (154), Expect(3) = 2e-051
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = -1 / +1
Query: 909 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPDAAALVVTVT 730
T GACGY + + GYG T A+S +F G ACG CY+V+C S + VT T
Sbjct: 34 TGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCDQQNSRWCKPGVTVTVTAT 213
Query: 729 DLCP 718
+LCP
Sbjct: 214 NLCP 225
Score = 56.1 bits (116), Expect(3) = 6e-027
Identities = 28/64 (43%), Positives = 31/64 (48%)
Frame = +2 / -3
Query: 719 GHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPH 898
GHR V VT + H L +H T *H P A P N L+A V PYP YPH
Sbjct: 224 GHRLVAVTVTVTPGLHHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPH 45
Query: 899 APAV 910
AP V
Sbjct: 44 APPV 33
Score = 55.1 bits (114), Expect(3) = 2e-051
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVT 322
W M RNWG WQ DLT +S++FRV ++ R ++V ++W+ G T
Sbjct: 490 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQT 639
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1 / -2
Query: 379 VAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
V G E L GEV GLP PV H P
Sbjct: 582 VGGGDTEGDALPGEVAVGLPVGAPVPGHGDP 490
>gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 5', mRNA sequence
Length = 816
Score = 101 bits (216), Expect(3) = 5e-048
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1 / +3
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V
Sbjct: 444 PNGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVN 623
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG K
Sbjct: 624 IQNLGGSGSVGAAWVKGDK 680
Score = 86.3 bits (182), Expect(3) = 5e-048
Identities = 34/67 (50%), Positives = 38/67 (56%)
Frame = -1 / +3
Query: 969 AGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
A W ATFYGG D SGT GACGY + GYGV A+ LF DG +CG CY +
Sbjct: 171 AAGWSQGTATFYGGVDASGTMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLIT 350
Query: 789 CVDSPSG 769
C S SG
Sbjct: 351 CDTSRSG 371
Score = 43.7 bits (89), Expect(3) = 5e-048
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
W +M RNWG WQ L + L+F V T+ + W+V+P
Sbjct: 687 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVP 812
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 138 bits (297), Expect(3) = 7e-048
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ YFN+V +TNV
Sbjct: 308 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNV 487
Query: 525 GGAGDIAAVSVKGS 484
GAGD+ +VS+KGS
Sbjct: 488 AGAGDVQSVSIKGS 529
Score = 99.6 bits (211), Expect(2) = 7e-030
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 531 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 352
Query: 662 AGMLRSKCSRGGLH 703
AG SKC RGGLH
Sbjct: 351 AGCAMSKCGRGGLH 310
Score = 63.8 bits (133), Expect(3) = 7e-048
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVS 841
G W+ AHATFYGG D SGT GACGY + + GYG TV +
Sbjct: 137 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTITVTAT 262
Score = 55.1 bits (114), Expect(2) = 7e-030
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2 / -3
Query: 839 VLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
++ TV PYP + YPHAP +VPD S PP* VAWA
Sbjct: 264 LVAVTVMVPYPVLYMFPYPHAPPIVPDASPPP*NVAWA 151
Score = 31.8 bits (63), Expect(3) = 7e-048
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCES 406
W M RNWGQ WQ+ L +S
Sbjct: 539 WQPMSRNWGQNWQSNSLLDGQS 604
>gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11198028, DNA
sequence
Length = 626
Score = 188 bits (404), Expect = 2e-046
Identities = 69/135 (51%), Positives = 98/135 (72%)
Frame = -1 / -3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PR HFD+S PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VTITNV
Sbjct: 609 WCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNV 430
Query: 525 GGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
GGAG +AA + G+ W M RNWG+ WQ+G +LT ++L+F+V T D + + +V P
Sbjct: 429 GGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAP 250
Query: 345 ADWKFGVTYQASKNF 301
A+W+FG TYQAS NF
Sbjct: 249 ANWQFGSTYQASVNF 205
Score = 108 bits (230), Expect = 2e-022
Identities = 58/136 (42%), Positives = 70/136 (51%)
Frame = +2 / +2
Query: 299 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 478
*K +AW V PN Q AG T S V T N VR +P+C PQLR ++
Sbjct: 203 *KLTEAW*VLPNCQFAGATLSATTTLPSSVCTLNDRAFPVRLAPLCQFSPQLRLMASQSV 382
Query: 479 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWR 658
+P AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ +
Sbjct: 383 PPVPMIHAAATAPAPPTLVMVTRSK*SCPLMANLIPPDLWHDTLR*LTGITPAWYTPMVS 562
Query: 659 NAGMLRSKCSRGGLHH 706
AG SKC RG LHH
Sbjct: 563 QAGCDMSKCRRGELHH 610
>gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 186 bits (400), Expect = 6e-046
Identities = 69/135 (51%), Positives = 97/135 (71%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PR HFD+S PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VTITNV
Sbjct: 39 WCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNV 218
Query: 525 GGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
GGAG +AA + G+ W M RNWG+ WQ+G LT ++L+F+V T D + + +V P
Sbjct: 219 GGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGAYLTGKALSFKVQTDDGKVVVADNVAP 398
Query: 345 ADWKFGVTYQASKNF 301
A+W+FG TYQAS NF
Sbjct: 399 ANWQFGSTYQASVNF 443
Score = 106 bits (227), Expect = 4e-022
Identities = 58/136 (42%), Positives = 71/136 (52%)
Frame = +2 / -3
Query: 299 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 478
*K +AW V PN Q AG T S V T N VR +P+C PQLR ++
Sbjct: 445 *KLTEAW*VLPNCQFAGATLSATTTLPSSVCTLNDRAFPVR*APLCQFSPQLRLMASQSV 266
Query: 479 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWR 658
+P AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ +
Sbjct: 265 PPVPMIHAAATAPAPPTLVMVTRSK*SCPLMANLIPPDRWHETLR*LTGITPAWYTPMVS 86
Query: 659 NAGMLRSKCSRGGLHH 706
+AG SKC RG LHH
Sbjct: 85 HAGCDMSKCRRGELHH 38
>gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889716, DNA
sequence
Length = 581
Score = 185 bits (398), Expect = 1e-045
Identities = 68/135 (50%), Positives = 97/135 (71%)
Frame = -1 / -1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PR HFD+ PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VTITNV
Sbjct: 572 WCNSPRRHFDMLQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNV 393
Query: 525 GGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
GGAG +AA + G+ W M RNWG+ WQ+G +LT ++L+F+V T D + + +V P
Sbjct: 392 GGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAP 213
Query: 345 ADWKFGVTYQASKNF 301
A+W+FG TYQAS NF
Sbjct: 212 ANWQFGSTYQASVNF 168
Score = 108 bits (231), Expect = 1e-022
Identities = 58/136 (42%), Positives = 70/136 (51%)
Frame = +2 / +1
Query: 299 *KFLDAWYVTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHLT 478
*K +AW V PN Q AG T S V T N VR +P+C PQLR ++
Sbjct: 166 *KLTEAW*VLPNCQFAGATLSATTTLPSSVCTLNDRAFPVRLAPLCQFSPQLRLMASQSV 345
Query: 479 RLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWR 658
+P AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ +
Sbjct: 346 PPVPMIHAAATAPAPPTLVMVTRSK*SCPLMANLIPPDLWHDTLR*LTGITPAWYTPMVS 525
Query: 659 NAGMLRSKCSRGGLHH 706
AG SKC RG LHH
Sbjct: 526 QAGCNMSKCRRGELHH 573
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 136 bits (291), Expect(2) = 5e-045
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR H D++ PAFLQIAQ +AGIVP++YRRV C K+GGIR+TI G+ YFN+V +TNV
Sbjct: 101 WCNPPRPHLDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNV 280
Query: 525 GGAGDIAAVSVKGS 484
GAGD+ +VS+KGS
Sbjct: 281 AGAGDVQSVSIKGS 322
Score = 99.6 bits (211), Expect(2) = 7e-024
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +T SPAP TLV T LK +P+MV R+PP F H TL * GTMPA CAIWR
Sbjct: 324 LEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRK 145
Query: 662 AGMLRSKCSRGGLH 703
AG SKC RGGLH
Sbjct: 144 AGCAMSKCGRGGLH 103
Score = 67.0 bits (140), Expect(2) = 5e-045
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W M RNWGQ WQ+ L +SL+F+V SD R TS V PA W+FG T++ ++
Sbjct: 332 WQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 496
Score = 32.7 bits (65), Expect(2) = 7e-024
Identities = 23/55 (41%), Positives = 25/55 (45%)
Frame = +1 / -2
Query: 307 LGCLVRDAELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
LG L AELP + G A VAG E + LA E LP L PV H P
Sbjct: 496 LGALEGLAELPARRRDAVAGDGAAVAGGDLEGEALAVEERVALPVLAPVPGHGLP 332
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 108 bits (231), Expect(3) = 8e-045
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITN 529
WC PPR HFD++ PAFL IAQ +AGIVP+++RRV C K+GGIR+TI G+ YFN+V +TN
Sbjct: 468 WCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVTN 644
Score = 84.9 bits (179), Expect(2) = 3e-024
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1 / -3
Query: 529 IGDRHHVEVLVPGDGVPDAALLRARHPAVGDRHDAGLLLRDLEERGHAEVEVLPRWLAP 705
+G +H VEV VP DG PDAALL ARH GD HDAG +LRD+EE G VEV PR +AP
Sbjct: 644 VGHQHQVEVGVPVDGEPDAALLHARHSPEGDGHDAGAVLRDVEEGGLGHVEVRPRRVAP 468
Score = 65.2 bits (136), Expect(3) = 8e-045
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAV 844
G W+ AHATFYGG D SGT GACGY + + GYG T A+
Sbjct: 191 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAAL 313
Score = 51.0 bits (105), Expect(2) = 3e-024
Identities = 23/42 (54%), Positives = 25/42 (59%)
Frame = +2 / -2
Query: 842 LTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWAGFHGP 967
L+A V PYP YPHAP +VPD S PP* VA A H P
Sbjct: 315 LSAAVFVPYPVLYRLPYPHAPPIVPDASPPP*NVACALCHPP 190
Score = 46.9 bits (96), Expect(3) = 8e-045
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1 / +3
Query: 840 TVLFGDGTACGGCYEVRCVDSPSGCKPDAAALVVT 736
T LF DG ACG CYE+RC ++ C P + T
Sbjct: 318 TALFNDGAACGSCYELRCDNAGRSCLPGTITVTAT 422
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 103 bits (220), Expect(4) = 1e-044
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = -1 / -2
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I +AGI+P+ Y++V C + GG+R++I G++YF +V
Sbjct: 411 PNGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVN 232
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I NVGG+G + A VKG K
Sbjct: 231 IQNVGGSGAVGAAWVKGDK 175
Score = 56.5 bits (117), Expect(4) = 1e-044
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 903 GACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSG 769
GACGY + GYG+ A+S LF +G +CG CY + C S SG
Sbjct: 618 GACGYGNLYNAGYGINNAALSQTLFNNGASCGQCYLITCDRSRSG 484
Score = 55.6 bits (115), Expect(4) = 1e-044
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = -1 / -2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKN 304
W +M RNWG WQ L + L+F V T+ + +V+P W+FG+T+ ++N
Sbjct: 168 WIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTFGTNRN 1
Score = 22.1 bits (42), Expect(4) = 1e-044
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 753 AALVVTVTDLCPP 715
+++ V+ T+LCPP
Sbjct: 462 SSITVSATNLCPP 424
>gb|CW464658.1|CW464658 fsbb001f215a12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215a12, DNA
sequence
Length = 278
Score = 180 bits (388), Expect = 3e-044
Identities = 68/78 (87%), Positives = 72/78 (92%)
Frame = -1 / -1
Query: 984 HGKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGG 805
HGKFTAG WK AHATFYGGRDGSGTTAGACGYKDTR++GYGVQTVAVS+VLFG+G ACGG
Sbjct: 236 HGKFTAGEWKRAHATFYGGRDGSGTTAGACGYKDTRSEGYGVQTVAVSSVLFGNGAACGG 57
Query: 804 CYEVRCVDSPSGCKPDAA 751
CYEVRCVDSP GCKP A
Sbjct: 56 CYEVRCVDSPDGCKPPGA 3
Score = 159 bits (341), Expect = 8e-038
Identities = 66/78 (84%), Positives = 66/78 (84%)
Frame = +2 / +1
Query: 749 AAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSR 928
AA GLHP GLSTHRTS* PPQA P PNST LTATVCTP P RVSLYPHAPAVVPDPSR
Sbjct: 1 AAPGGLHPSGLSTHRTS*QPPQAAPLPNSTELTATVCTP*PSDRVSLYPHAPAVVPDPSR 180
Query: 929 PP*KVAWAGFHGPAVNLP 982
PP*KVAWA FH PAVNLP
Sbjct: 181 PP*KVAWARFHSPAVNLP 234
>gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_D09_A002 5', mRNA sequence
Length = 727
Score = 100 bits (213), Expect(2) = 2e-043
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = -1 / +1
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P+ WC R HFD++ PAF +I GI+P+ Y+RV C K+GG+R+++ G+ Y N+V
Sbjct: 490 PEGGWCNQHRPHFDMAQPAFEKIGVYSGGIIPVMYKRVPCVKRGGVRFSVNGHDYINLVL 669
Query: 537 ITNVGGAGDIAAVSVKGS 484
+TNV AG I ++ VK S
Sbjct: 670 VTNVAAAGSIKSMEVKTS 723
Score = 97.7 bits (207), Expect(2) = 2e-043
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
W AHATFYGG D S T GACGY + +QGYG +T A+STVLF DG +CG CY++ C
Sbjct: 226 WLKAHATFYGGADASDTMGGACGYGNLYSQGYGTRTAALSTVLFNDGASCGQCYKIAC 399
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 109 bits (232), Expect(2) = 3e-043
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CY++RC
Sbjct: 193 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYKLRC 372
Query: 786 VDSPSGCKPDAAALVVT 736
++ C P + T
Sbjct: 373 DNAGRSCLPGTITVTAT 423
Score = 88.1 bits (186), Expect(2) = 3e-043
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTI 568
WC PPR HFD++ PAFL IAQ +AGIVP+++RRV C K+GGIR+TI
Sbjct: 469 WCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVKKGGIRFTI 606
Score = 75.3 bits (158), Expect(2) = 3e-028
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H +HR+ * P A PS NS VL+A V PYP YPHAP +VP
Sbjct: 422 VAVTVMVPGRHDRPALSHRSL*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPYPHAPPIVP 243
Query: 917 DPSRPP*KVAWAGFHGP 967
D S PP* VA A H P
Sbjct: 242 DASPPP*NVACALCHPP 192
Score = 71.6 bits (150), Expect(2) = 3e-028
Identities = 29/45 (64%), Positives = 30/45 (66%)
Frame = +2 / -3
Query: 569 MVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
MV RMPP F H TL GTMPA CA+WR AG SKC RGGLH
Sbjct: 605 MVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLH 471
>gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_F04_A002 5', mRNA sequence
Length = 794
Score = 100 bits (213), Expect(3) = 1e-042
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = -1 / +1
Query: 702 CKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNVG 523
C PP HF L + +F +IA KAGI+PI YRRV C ++GG+R+++ G +F V I+NVG
Sbjct: 490 CNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVG 669
Query: 522 GAGDIAAVSVKGSK 481
GAGD+ +V +KG++
Sbjct: 670 GAGDVRSVKIKGTE 711
Score = 77.1 bits (162), Expect(3) = 1e-042
Identities = 31/73 (42%), Positives = 37/73 (50%)
Frame = -1 / +1
Query: 936 YGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPD 757
Y D GACG+ D GYG+ TV +ST LF G ACGGCYEV+CV C P
Sbjct: 238 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVKDLKYCLPG 417
Query: 756 AAALVVTVTDLCP 718
+ +V P
Sbjct: 418 TSIVVTATNFCAP 456
Score = 61.1 bits (127), Expect(3) = 2e-023
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = +2 / -1
Query: 719 GHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPH 898
G + + T+ G L TH TS* PP A P NS VL+ TV PYPC S PH
Sbjct: 455 GAQKLVAVTTIEVPGRQYLRSLTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 276
Query: 899 APAVVPDPS 925
AP + S
Sbjct: 275 APPMASSGS 249
Score = 58.3 bits (121), Expect(3) = 2e-023
Identities = 32/72 (44%), Positives = 38/72 (52%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
+P T SPAPPTL+I T+ K P+ PP H T R +G MPAF AI+ N
Sbjct: 707 VPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWMGMMPAFQSAIFSND 528
Query: 665 GMLRSKCSRGGL 700
M R K GGL
Sbjct: 527 WMGRRKWWLGGL 492
Score = 35.9 bits (72), Expect(3) = 1e-042
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTF 397
W M RNWGQVW D+ + L+F
Sbjct: 718 WLSMGRNWGQVWHINCDMRGQPLSF 792
Score = 29.0 bits (57), Expect(3) = 2e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1 / -3
Query: 397 ERQRLAGEVLPGLPHLPPVALHLRP 471
+RQ L+ V +PHL P+A H P
Sbjct: 792 KRQGLSPHVTVDVPHLAPIAAHREP 718
>gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189567, DNA
sequence
Length = 675
Score = 98.7 bits (209), Expect(4) = 2e-042
Identities = 34/78 (43%), Positives = 53/78 (67%)
Frame = -1 / -3
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S P++ +I + GI+P+ Y++V C++ GG+R+ I G+ YF +V
Sbjct: 493 PNGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVN 314
Query: 537 ITNVGGAGDIAAVSVKGS 484
I N+GG+G + A VKG+
Sbjct: 313 IQNLGGSGSVGAAWVKGT 260
Score = 57.4 bits (119), Expect(4) = 2e-042
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -1 / -3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
W +M RNWG WQ LT ++L+F V T+ + +V P W+FG TY ++ F
Sbjct: 250 WIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQQF 80
Score = 51.9 bits (107), Expect(4) = 2e-042
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 870 GYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPDAAALVVTVT 730
GYGV A+S LF DG +CG CY + C S SG + VTVT
Sbjct: 667 GYGVTNAALSQTLFNDGASCGQCYTITCDGSRSGSQYCKPGNTVTVT 527
Score = 22.6 bits (43), Expect(4) = 2e-042
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 538 VTVTATNLCPP 506
>gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 711
Score = 100 bits (212), Expect(3) = 6e-042
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = -1 / -2
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ +I AG++P+ Y++V C++ GG+R+ I G++YF +V
Sbjct: 515 PNGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVN 336
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG +
Sbjct: 335 IQNLGGSGSVGAAWVKGDR 279
Score = 64.3 bits (134), Expect(3) = 6e-042
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -1 / -2
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
R W +M RNWG WQ L + L+F V T+ + W+V+P W+FG TY ++NF
Sbjct: 281 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 102
Score = 46.9 bits (96), Expect(3) = 6e-042
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1 / -2
Query: 891 YKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSG 769
Y + GYGV A+S+ LF DG +CG CY + C S G
Sbjct: 710 YDNLYNAGYGVNNAALSSTLFNDGASCGQCYLITCDASRPG 588
>gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 704
Score = 100 bits (212), Expect(3) = 8e-042
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = -1 / -1
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ +I AG++P+ Y++V C++ GG+R+ I G++YF +V
Sbjct: 515 PNGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVN 336
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG +
Sbjct: 335 IQNLGGSGSVGAAWVKGDR 279
Score = 64.3 bits (134), Expect(3) = 8e-042
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -1 / -1
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
R W +M RNWG WQ L + L+F V T+ + W+V+P W+FG TY ++NF
Sbjct: 281 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQNF 102
Score = 46.4 bits (95), Expect(3) = 8e-042
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1 / -1
Query: 870 GYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSG 769
GYGV A+S+ LF DG +CG CY + C S G
Sbjct: 689 GYGVNNAALSSTLFNDGASCGQCYLITCDASRPG 588
>gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221289, DNA
sequence
Length = 616
Score = 113 bits (241), Expect(3) = 8e-042
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLS PAF+++AQ +AGIVP+ YRRV C ++GG+R+ + GN Y+ + + NV
Sbjct: 265 WCNPPRTHFDLSKPAFMKMAQWRAGIVPVMYRRVPCVRRGGLRFALQGNPYWLLAYVMNV 444
Query: 525 GGAGDIAAVSVK 490
GGAGD+ + VK
Sbjct: 445 GGAGDVVEMWVK 480
Score = 71.6 bits (150), Expect(3) = 8e-042
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / +1
Query: 909 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSP 775
T GACGY + A GYG T A+ST LF DG CG CY++RC SP
Sbjct: 43 TGGACGYGNLYATGYGTDTAALSTTLFKDGHGCGTCYQIRCTGSP 177
Score = 70.7 bits (148), Expect(2) = 1e-021
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = +2 / -3
Query: 491 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGM 670
FT + SPAPPT + + FP R PP T R GT+PA CAI+ AG+
Sbjct: 479 FTHISTTSPAPPTFITYASSQ*GFPWSANRRPPLRTQGTRRYMTGTIPARHCAIFMKAGL 300
Query: 671 LRSKCSRGGLHH 706
RSK RGGLHH
Sbjct: 299 ERSKWVRGGLHH 264
Score = 54.2 bits (112), Expect(2) = 1e-021
Identities = 25/45 (55%), Positives = 26/45 (57%)
Frame = +2 / -3
Query: 776 GLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAV 910
G HR *H PQ PS NS VL+A V PYP A YPHAP V
Sbjct: 176 GEPVHRIW*HVPQPCPSLNSVVLSAAVSVPYPVAYRLPYPHAPPV 42
Score = 25.8 bits (50), Expect(3) = 8e-042
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 768 CKPDAAALVVTVTDLCPP 715
C + ++ VT T+LCPP
Sbjct: 181 CYAGSPSITVTATNLCPP 234
>gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186581, DNA
sequence
Length = 562
Score = 110 bits (235), Expect(3) = 7e-041
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = -1 / -3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PR HFD+S PA+ I +AG++P++YRRV+C + GGIR+ I+G+ YF++VTITNV
Sbjct: 206 WCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTITNV 27
Query: 525 GGAGDIAA 502
GGAG +AA
Sbjct: 26 GGAGAVAA 3
Score = 68.9 bits (144), Expect(2) = 7e-021
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = +2 / +1
Query: 503 AAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGMLRSK 682
AA +PAPPTLV+VT K P+M +PP H TLR* G PA+ + AG SK
Sbjct: 4 AATAPAPPTLVMVTRSK*SCPLMANLIPPDLWHDTLR*LTGITPAWYTPMVSQAGCDMSK 183
Query: 683 CSRGGLHH 706
C RG LHH
Sbjct: 184 CRRGELHH 207
Score = 66.6 bits (139), Expect(3) = 7e-041
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / -3
Query: 903 GACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G+CGY D + GYG QT A+ST L+GDG +CG CY V C
Sbjct: 419 GSCGYGDLYSAGYGTQTTALSTALYGDGASCGACYLVTC 303
Score = 53.3 bits (110), Expect(2) = 7e-021
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 794 TS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAP 904
T *H PQ PSP S VL+A VC PYP S YPH P
Sbjct: 310 TR*HAPQEAPSP*SAVLSAVVCVPYPALYRSPYPHDP 420
Score = 30.4 bits (60), Expect(3) = 7e-041
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1 / -3
Query: 768 CKPDAAALVVTVTDLCPP 715
CKP + ++ VT T+ CPP
Sbjct: 281 CKPGSPSVTVTATNFCPP 228
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 111 bits (236), Expect(2) = 9e-041
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +3
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 150 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 329
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 330 DNDGQSCLPGTITVTAT 380
Score = 79.0 bits (166), Expect(2) = 2e-026
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -2
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 379 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 200
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 199 DASPPP*NVAWA 164
Score = 78.0 bits (164), Expect(2) = 9e-041
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQ 589
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+
Sbjct: 426 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKK 542
Score = 62.0 bits (129), Expect(2) = 2e-026
Identities = 25/37 (67%), Positives = 25/37 (67%)
Frame = +2 / -2
Query: 593 FAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
F H TL * GTMPA CAIWR AG SKC RGGLH
Sbjct: 538 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLH 428
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 111 bits (236), Expect(2) = 9e-041
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +3
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 147 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 326
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 327 DNDGQSCLPGTITVTAT 377
Score = 82.2 bits (173), Expect(2) = 2e-027
Identities = 37/77 (48%), Positives = 43/77 (55%)
Frame = +2 / -2
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 376 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 197
Query: 917 DPSRPP*KVAWAGFHGP 967
D S PP* VAWA H P
Sbjct: 196 DASPPP*NVAWALCHPP 146
Score = 78.0 bits (164), Expect(2) = 9e-041
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQ 589
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+
Sbjct: 423 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKK 539
Score = 62.0 bits (129), Expect(2) = 2e-027
Identities = 25/37 (67%), Positives = 25/37 (67%)
Frame = +2 / -2
Query: 593 FAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
F H TL * GTMPA CAIWR AG SKC RGGLH
Sbjct: 535 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLH 425
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF G ACG CYE+RC
Sbjct: 149 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNGGAACGSCYELRC 328
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 329 DNDGQSCLPGTITVTAT 379
Score = 80.8 bits (170), Expect(2) = 1e-040
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQG 586
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C K+G
Sbjct: 425 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKG 544
Score = 76.7 bits (161), Expect(2) = 2e-026
Identities = 34/72 (47%), Positives = 40/72 (55%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A P NS VL+A V PYP + YPHAP +VP
Sbjct: 378 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPPLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 199
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 198 DASPPP*NVAWA 163
Score = 64.3 bits (134), Expect(2) = 2e-026
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +2 / -3
Query: 587 PCFAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
P F H TL * GTMPA CAIWR AG SKC RGGLH
Sbjct: 543 PFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLH 427
>gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_C11_A002 5', mRNA sequence
Length = 688
Score = 101 bits (216), Expect(2) = 2e-040
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1 / +3
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V
Sbjct: 432 PNGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVN 611
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG K
Sbjct: 612 IQNLGGSGSVGAAWVKGDK 668
Score = 86.3 bits (182), Expect(2) = 2e-040
Identities = 34/67 (50%), Positives = 38/67 (56%)
Frame = -1 / +3
Query: 969 AGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
A W ATFYGG D SGT GACGY + GYGV A+ LF DG +CG CY +
Sbjct: 159 AAGWSQGTATFYGGVDASGTMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLIT 338
Query: 789 CVDSPSG 769
C S SG
Sbjct: 339 CDTSRSG 359
>gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103n01, DNA
sequence
Length = 667
Score = 101 bits (216), Expect(3) = 2e-040
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1 / -1
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V
Sbjct: 370 PNGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVN 191
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG K
Sbjct: 190 IQNLGGSGSVGAAWVKGDK 134
Score = 60.6 bits (126), Expect(3) = 2e-040
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -1 / -1
Query: 909 TAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSG 769
T GACGY + GYGV A+ LF DG +CG CY + C S SG
Sbjct: 583 TGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCDTSRSG 443
Score = 43.7 bits (89), Expect(3) = 2e-040
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1 / -1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
W +M RNWG WQ L + L+F V T+ + W+V+P
Sbjct: 127 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVP 2
>gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 107 bits (228), Expect(3) = 2e-040
Identities = 39/67 (58%), Positives = 44/67 (65%)
Frame = -1 / +2
Query: 987 GHGKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACG 808
GH G W AHATFYGG D SGT GACGY + +QGYG T A+ST LF G +CG
Sbjct: 23 GHAPLGGGAWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCG 202
Query: 807 GCYEVRC 787
C+EVRC
Sbjct: 203 ACFEVRC 223
Score = 75.3 bits (158), Expect(3) = 2e-040
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQG 586
WC PPR HFD+S P F +IA +AGIVP+SYRRVAC K+G
Sbjct: 329 WCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKG 448
Score = 23.5 bits (45), Expect(3) = 2e-040
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 750 ALVVTVTDLCPPKD 709
++VVT T+ CPP +
Sbjct: 263 SVVVTATNFCPPNN 304
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 111 bits (236), Expect(2) = 6e-040
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 161 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 340
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 341 DNDGQSCLPGTITVTAT 391
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 390 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 211
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 210 DASPPP*NVAWA 175
Score = 75.3 bits (158), Expect(2) = 6e-040
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVAC 598
WC PPR HFD++ PAFLQIAQ +AGIVP++YRRV C
Sbjct: 437 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPC 544
Score = 59.3 bits (123), Expect(2) = 1e-025
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +2 / -3
Query: 599 HATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
H TL * GTMPA CAIWR AG SKC RGGLH
Sbjct: 543 HGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLH 439
>gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_54_H01_A002 5', mRNA sequence
Length = 690
Score = 99.6 bits (211), Expect(2) = 1e-039
Identities = 35/79 (44%), Positives = 53/79 (67%)
Frame = -1 / +1
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I G+VP+ Y++V C++ GG+R+++ G++YF +V
Sbjct: 430 PNGGWCGPGRPHFDMSQPAWEHIGIYSGGVVPVLYQQVKCSRTGGVRFSLDGSQYFLLVN 609
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG K
Sbjct: 610 IQNLGGSGSVGAAWVKGDK 666
Score = 85.4 bits (180), Expect(2) = 1e-039
Identities = 34/67 (50%), Positives = 38/67 (56%)
Frame = -1 / +1
Query: 969 AGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
A W ATFYGG D SGT GACGY + GYGV A+ LF DG +CG CY +
Sbjct: 157 AAGWSQGTATFYGGVDTSGTMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYLIT 336
Query: 789 CVDSPSG 769
C S SG
Sbjct: 337 CDTSRSG 357
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 111 bits (236), Expect(2) = 3e-039
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 154 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 333
Query: 786 VDSPSGCKPDAAALVVT 736
+ C P + T
Sbjct: 334 DNDGQSCLPGTITVTAT 384
Score = 79.0 bits (166), Expect(2) = 8e-025
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H + R+S* P A PS NS VL+A V PYP + YPHAP +VP
Sbjct: 383 VAVTVMVPGRHDCPSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAPPIVP 204
Query: 917 DPSRPP*KVAWA 952
D S PP* VAWA
Sbjct: 203 DASPPP*NVAWA 168
Score = 73.0 bits (153), Expect(2) = 3e-039
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVAC 598
WC PPR HFD++ PAFLQIAQ +AGIVP++YR V C
Sbjct: 430 WCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYREVPC 537
Score = 56.5 bits (117), Expect(2) = 8e-025
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 599 HATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
H T * GTMPA CAIWR AG SKC RGGLH
Sbjct: 536 HGTSL*ATGTMPARYCAIWRKAGCAMSKCGRGGLH 432
>gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117h02, DNA
sequence
Length = 725
Score = 101 bits (216), Expect(3) = 1e-038
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1 / -2
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I AG+VP+ Y++V C++ GG+R+++ G++YF +V
Sbjct: 577 PNGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVN 398
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I N+GG+G + A VKG K
Sbjct: 397 IQNLGGSGSVGAAWVKGDK 341
Score = 63.8 bits (133), Expect(3) = 1e-038
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -1 / -2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
W +M RNWG WQ L + L+F V T+ + W+V+P W+FG TY ++NF
Sbjct: 334 WIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPGWWQFGQTYSTTQNF 164
Score = 34.1 bits (68), Expect(3) = 1e-038
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1 / -2
Query: 834 LFGDGTACGGCYEVRCVDSPSG 769
LF DG +CG CY + C S SG
Sbjct: 715 LFNDGASCGQCYLITCDTSRSG 650
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 111 bits (236), Expect(2) = 2e-038
Identities = 41/77 (53%), Positives = 49/77 (63%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + + GYG T A+ST LF DG ACG CYE+RC
Sbjct: 193 GGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRC 372
Query: 786 VDSPSGCKPDAAALVVT 736
++ C P + T
Sbjct: 373 DNAGRSCLPGTITVTAT 423
Score = 78.0 bits (164), Expect(2) = 4e-025
Identities = 37/77 (48%), Positives = 42/77 (54%)
Frame = +2 / -1
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H +HR+S* P A PS NS VL+A V PYP YPHAP +VP
Sbjct: 422 VAVTVMVPGRHDRPALSHRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPYPHAPPIVP 243
Query: 917 DPSRPP*KVAWAGFHGP 967
D S PP* VA A H P
Sbjct: 242 DASPPP*NVACALCHPP 192
Score = 70.3 bits (147), Expect(2) = 2e-038
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVAC 598
WC PPR HFD++ PAFL IAQ +AGIVP+++RRV C
Sbjct: 469 WCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPC 576
Score = 58.3 bits (121), Expect(2) = 4e-025
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / -1
Query: 593 FAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLH 703
F H TL GTMPA CA+WR AG SKC RGGLH
Sbjct: 581 FTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLH 471
>gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466904, DNA
sequence
Length = 694
Score = 103 bits (220), Expect(4) = 2e-038
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = -1 / -2
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC P R HFD+S PA+ I +AGI+P+ Y++V C + GG+R++I G++YF +V
Sbjct: 546 PNGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVN 367
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I NVGG+G + A VKG K
Sbjct: 366 IQNVGGSGAVGAAWVKGDK 310
Score = 58.3 bits (121), Expect(4) = 2e-038
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = -1 / -2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASKNF 301
W +M RNWG WQ L + L+F V T+ + +V+P W+FG+T+ ++NF
Sbjct: 303 WIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTFGTNRNF 133
Score = 32.7 bits (65), Expect(4) = 2e-038
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 843 STVLFGDGTACGGCYEVRCVDSPSG 769
S LF +G +CG CY + C S SG
Sbjct: 693 SQTLFNNGASCGQCYLITCDRSRSG 619
Score = 22.1 bits (42), Expect(4) = 2e-038
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 753 AALVVTVTDLCPP 715
+++ V+ T+LCPP
Sbjct: 597 SSITVSATNLCPP 559
>gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498658, DNA
sequence
Length = 756
Score = 87.7 bits (185), Expect(6) = 2e-038
Identities = 31/70 (44%), Positives = 50/70 (71%)
Frame = -1 / +2
Query: 690 REHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNVGGAGD 511
R HFD+S PA+ +I AG++P+ Y++V C++ GG+R+ I G++YF +V I N+GG+G
Sbjct: 446 RPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNIQNLGGSGS 625
Query: 510 IAAVSVKGSK 481
+ A VKG +
Sbjct: 626 VGAAWVKGDR 655
Score = 38.6 bits (78), Expect(6) = 2e-038
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 969 AGPWKPAHATFYGGRDGSGT 910
A W P ATFYGG DGSGT
Sbjct: 42 AAGWSPGTATFYGGADGSGT 101
Score = 37.7 bits (76), Expect(6) = 2e-038
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1 / +2
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTS 382
R W +M RNWG WQ L + L+F V T+
Sbjct: 653 RTGWIQMSRNWGANWQALAGLVGQGLSFAVTTT 751
Score = 34.5 bits (69), Expect(6) = 2e-038
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1 / +3
Query: 903 GACGYKDTRAQGYGVQTVAVSTVLFGDGTACG 808
GACGY + GYGV A+S+ L G G
Sbjct: 213 GACGYDNLYNAGYGVNNAALSSTLGGTARRAG 308
Score = 29.5 bits (58), Expect(6) = 2e-038
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 828 GDGTACGGCYEVRCVDSPSG 769
GDG +CG CY + C S G
Sbjct: 287 GDGASCGQCYLITCDASRPG 346
Score = 22.6 bits (43), Expect(6) = 2e-038
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1 / +2
Query: 729 DLCPPKDQWCKP 694
D P QWCKP
Sbjct: 329 DASRPGGQWCKP 364
>gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 99.6 bits (211), Expect(3) = 4e-038
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = -1 / +2
Query: 969 AGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
+G W PA ATFYGG DGS T GACGY D QGYG+ A+ST LF DG +CG CY +
Sbjct: 137 SGDWLPATATFYGGADGSDTMGGACGYSDLYEQGYGINNAALSTALFNDGASCGQCYVII 316
Query: 789 CVDS 778
C S
Sbjct: 317 CDSS 328
Score = 72.1 bits (151), Expect(3) = 4e-038
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -1 / +2
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITG 562
P WC PPR HFD+S PA+ I AG++ + Y+RV C K GG+R+T+ G
Sbjct: 425 PAGGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTMAG 580
Score = 26.7 bits (52), Expect(3) = 4e-038
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 768 CKPDAAALVVTVTDLCPP 715
CKP +VV+ T+ CPP
Sbjct: 341 CKPGNNWVVVSATNFCPP 394
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,305,030,663
Number of Sequences: 832831
Number of extensions: 25767558
Number of successful extensions: 387587
Number of sequences better than 1.0e-020: 160
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 32208772323
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)