TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3106166.2.1
(715 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 269 3e-071
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 166 5e-066
gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves... 201 1e-063
gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-tre... 188 6e-052
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 193 2e-048
gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorgh... 100 1e-047
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 191 1e-047
gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficie... 175 2e-047
gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorgh... 98 3e-047
gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorgh... 98 3e-047
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 188 1e-046
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 187 2e-046
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 186 3e-046
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 185 7e-046
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 174 1e-042
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 111 3e-042
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 101 4e-041
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 101 4e-041
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 101 4e-041
gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation... 84 5e-041
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 107 6e-041
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 107 6e-041
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 123 9e-039
gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorgh... 76 1e-038
gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorgh... 107 3e-037
gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorgh... 101 5e-037
gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorgh... 71 6e-037
gb|CW311231.1|CW311231 104_800_11470125_116_35753_085 Sorgh... 98 3e-036
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 151 1e-035
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 100 2e-035
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 148 8e-035
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 147 2e-034
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 147 2e-034
gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation... 91 2e-032
gb|CW053186.1|CW053186 104_293_10515824_115_30191 Sorghum m... 92 9e-031
gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorgh... 107 3e-029
gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorgh... 107 3e-029
gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorgh... 107 4e-029
gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorgh... 68 5e-029
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 81 3e-027
gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorgh... 101 7e-027
gb|CW228589.1|CW228589 104_668_11206459_148_37252_072 Sorgh... 75 1e-026
gb|CW252367.1|CW252367 104_715_11224460_116_35097_074 Sorgh... 80 2e-026
gb|CW228588.1|CW228588 104_668_11206459_116_37251_072 Sorgh... 75 1e-025
gb|CW194264.1|CW194264 104_617_11180005_116_36787_057 Sorgh... 80 2e-025
gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorgh... 112 3e-025
gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adap... 67 6e-025
gb|CD423108.1|CD423108 SA1_27_B10.b1_A002 Salicylic acid-tr... 50 2e-024
gb|BZ694054.1|BZ694054 SP__Ba0042B06.r SP__Ba Sorghum propi... 92 2e-024
gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum m... 112 6e-024
gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorgh... 112 6e-024
gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum m... 89 2e-023
gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation... 108 8e-023
gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stresse... 105 5e-022
gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorgh... 53 8e-021
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 269 bits (582), Expect = 3e-071
Identities = 115/133 (86%), Positives = 126/133 (94%)
Frame = -2 / +1
Query: 690 IEQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPF 511
I+QGWLHTGD+GYFDE GQL VVDRLKELIKYKGFQIAPAELEGLLLSHPEILDA VIP+
Sbjct: 28 IKQGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAAVIPY 207
Query: 510 PDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRR 331
PD EAGEVPIAYVVRS +SSL EVDVQKFIEKQVA+YK+LR+V FVDSVPKSA+GKILRR
Sbjct: 208 PDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRR 387
Query: 330 ELISKVRSSKL*Q 292
ELI++VRSSKL*+
Sbjct: 388 ELIAQVRSSKL*R 426
Score = 185 bits (399), Expect = 5e-046
Identities = 85/127 (66%), Positives = 95/127 (74%)
Frame = +1 / -3
Query: 310 SDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDLLFNKFLDINFSQRTLRGPYDVSNRN 489
SD DE SSQ+L SRFWY VHK + PQ VV DLLF+KFLDINFSQ TL PY++ +RN
Sbjct: 408 SDLGDELSSQNLSRSRFWYTVHKLYLPQSLVVRDLLFDKFLDINFSQ*TLW*PYNIGDRN 229
Query: 490 FTSFSIGERDNNSIQNFWMRQK*PFKLGRCNLKTFVLNQFFKSINYEKLTSLIKVSNITS 669
F F I RDN+SI+NF MRQK FKL R NL+ FVLNQ FKSI+ KL S IKVS ITS
Sbjct: 228 FPCFGIRIRDNSSIKNFRMRQKQSFKLSRSNLEAFVLNQLFKSIDNMKLASFIKVSKITS 49
Query: 670 MQPPLLD 690
MQPPLLD
Sbjct: 48 MQPPLLD 28
Score = 171 bits (368), Expect = 1e-041
Identities = 90/134 (67%), Positives = 99/134 (73%)
Frame = -3 / +2
Query: 692 RSSKGGCILVILDTLMREVSFS*LIDLKN*LSTKVFRLHLPSLKGYFCLIQKFWMLLLSR 513
+SSKGGCILVILDTLM+E SF IDLK+*LSTK RL L SLK FCLI KF MLLLSR
Sbjct: 26 QSSKGGCILVILDTLMKEASFMLSIDLKS*LSTKASRLLLLSLKDCFCLILKFLMLLLSR 205
Query: 512 SPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSRSHTTKN*GG*PLWTAYQNLLQGRS*E 333
+ K KFL G RV LKLMSRNL KSRS TT++*G * LWT YQNLL+ R *E
Sbjct: 206 ILIPKQGKFLSPMLYGHQRVHWLKLMSRNLSKSRSRTTRD*GR*SLWTVYQNLLRERF*E 385
Query: 332 ENSSLKSDHPSYSK 291
E+SS KSDHPS S+
Sbjct: 386 ESSSPKSDHPSCSE 427
Score = 163 bits (351), Expect = 2e-039
Identities = 85/134 (63%), Positives = 93/134 (69%)
Frame = -1 / +3
Query: 691 DRARVVAYW*YWIL**GRSAFRS**T*RTD*VQRFSDCTCRA*RATSVSSRNSGCCCYPV 512
++ARVVAYW* WIL** R A *T*R D*VQR DC+C A*R VSS NS CCCYPV
Sbjct: 27 NQARVVAYW*SWIL**KRPASCCR*T*RAD*VQRLPDCSC*A*RIAFVSS*NS*CCCYPV 206
Query: 511 PRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAGRILQKIEEGDLCGQRTKICFREDLEK 332
S SSY L V EF *S*CPEIY KAGR LQ+ EEG +CGQ TKIC +D EK
Sbjct: 207 S*SRSRGSSYRLCCTVTKEFTG*S*CPEIYRKAGRALQETEEGKVCGQCTKICCGKDFEK 386
Query: 331 RTHL*SQIIQAIAS 290
R H SQIIQA+A+
Sbjct: 387 RAHRPSQIIQAVAN 428
Score = 162 bits (348), Expect(2) = 5e-040
Identities = 78/133 (58%), Positives = 93/133 (69%)
Frame = +3 / -2
Query: 288 RLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRPAFQ*ISGHQLQSKNSQRT 467
+ A AWMI* +QILV CPQ PSS+ CS RPAF+*ISGHQLQ NS T
Sbjct: 430 QFATAWMI*LGR*ALFSKSFPQQILVHCPQTLPSSVSCSARPAFR*ISGHQLQPVNSLVT 251
Query: 468 LRRKQ*ELHQLQHRGTG*QQHPEFLDETEVALQARQVQSENLCT*SVL*VYQLRKADLPH 647
++ ++*EL L+ + TG*QQH EF DET+ LQA+Q QS +LCT*S L*VY+ +A L H
Sbjct: 250 VQHRR*ELPLLRDQDTG*QQHQEFQDETKAILQAQQEQSGSLCT*SAL*VYRQHEAGLFH 71
Query: 648 QSIQYHQYATTLA 686
QSIQ HQYATTLA
Sbjct: 70 QSIQDHQYATTLA 32
Score = 133 bits (285), Expect = 3e-030
Identities = 61/78 (78%), Positives = 62/78 (79%)
Frame = +2 / -1
Query: 296 YSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTSVKELSEDLTT 475
YSLDDLT MSSLLKIFP ADFGTLST T L+ L* ATCFSINFWTSTS EL D TT
Sbjct: 422 YSLDDLTWAMSSLLKIFPAADFGTLSTNFTFLSLL*CATCFSINFWTSTSASELFGDRTT 243
Query: 476 *AIGTSPASASGNGITTA 529
*AIGTSPAS SG GIT A
Sbjct: 242 *AIGTSPASGSGYGITAA 189
Score = 23.5 bits (45), Expect(2) = 5e-040
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / -1
Query: 668 VCNHPCSI 691
VCNHPC I
Sbjct: 50 VCNHPCLI 27
>gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_E09_A002 5', mRNA sequence
Length = 781
Score = 166 bits (357), Expect(4) = 2e-063
Identities = 74/83 (89%), Positives = 76/83 (91%)
Frame = +2 / -1
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS 445
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS
Sbjct: 367 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS 188
Query: 446 VKELSEDLTT*AIGTSPASASGN 514
VKEL+ DLTT*AIGTSPASASGN
Sbjct: 187 VKELTGDLTT*AIGTSPASASGN 119
Score = 165 bits (355), Expect(4) = 5e-066
Identities = 74/82 (90%), Positives = 76/82 (92%)
Frame = -2 / +3
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILR 334
FPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILR
Sbjct: 120 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILR 299
Query: 333 RELISKVRSSKL*QAGFCVQKL 268
RELI+KVRSSKL*Q FC +L
Sbjct: 300 RELIAKVRSSKL*QTSFCFVRL 365
Score = 151 bits (325), Expect(4) = 1e-054
Identities = 63/78 (80%), Positives = 66/78 (84%)
Frame = +1 / -3
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDLLFNKFLDINFSQRTL 459
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDLLFNKFLDINFSQRT
Sbjct: 353 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDLLFNKFLDINFSQRTH 174
Query: 460 RGPYDVSNRNFTSFSIGE 513
RGPYDV NRNF SFSIGE
Sbjct: 173 RGPYDVGNRNFPSFSIGE 120
Score = 151 bits (325), Expect(4) = 9e-057
Identities = 67/78 (85%), Positives = 71/78 (91%)
Frame = -1 / +2
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAGRILQKIEEGDLCGQRTKICFREDLE 335
VPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAGRILQKIEEG LCGQRTKICFR+D E
Sbjct: 119 VPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAGRILQKIEEGYLCGQRTKICFRKDFE 298
Query: 334 KRTHL*SQIIQAIASRLL 281
KRT *SQI+QAIA++LL
Sbjct: 299 KRTDR*SQIVQAIANQLL 352
Score = 147 bits (316), Expect(4) = 4e-053
Identities = 70/78 (89%), Positives = 70/78 (89%)
Frame = -3 / +1
Query: 512 SPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSRSHTTKN*GG*PLWTAYQNLLQGRS*E 333
SPMLKL KFLL TS*GPL VL*LKLMSRNLLKSRSHTTKN*GG PLWTAYQNLLQ R *E
Sbjct: 121 SPMLKLGKFLLPTS*GPL*VL*LKLMSRNLLKSRSHTTKN*GGLPLWTAYQNLLQERF*E 300
Query: 332 ENSSLKSDHPSYSKPASV 279
EN SLKSD PSYSKPASV
Sbjct: 301 EN*SLKSDRPSYSKPASV 354
Score = 127 bits (272), Expect(3) = 2e-036
Identities = 59/79 (74%), Positives = 61/79 (77%)
Frame = +3 / -2
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRPAFQ*ISGHQLQSKNS 458
+RS AIAW I* KQILVRCPQR PSSIFCSMRPAFQ*ISGHQLQSKNS
Sbjct: 354 NRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQR*PSSIFCSMRPAFQ*ISGHQLQSKNS 175
Query: 459 QRTLRRKQ*ELHQLQHRGT 515
Q TLRR+Q*EL QLQHRGT
Sbjct: 174 QGTLRRRQ*ELPQLQHRGT 118
Score = 62.9 bits (131), Expect(4) = 5e-066
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -2 / +1
Query: 594 KGFQIAPAELEGLLLSHPEILDAVVIPF 511
KGFQIAP ELEGLLLSHPEILDAVVIP+
Sbjct: 22 KGFQIAPFELEGLLLSHPEILDAVVIPY 105
Score = 58.8 bits (122), Expect(4) = 2e-063
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -2
Query: 517 DNNSIQNFWMRQK*PFKLGRCNLKTFVL 600
DNNSI+NFWMRQK*PFKL R NLKTF L
Sbjct: 99 DNNSIKNFWMRQK*PFKLKRSNLKTFDL 16
Score = 57.9 bits (120), Expect(4) = 9e-057
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +3
Query: 595 QRFSDCTCRA*RATSVSSRNSGCCCYPV 512
QRFSDC+ A*RATSVSSRNS CCCYP+
Sbjct: 21 QRFSDCSF*A*RATSVSSRNS*CCCYPI 104
Score = 55.1 bits (114), Expect(4) = 4e-053
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = -3 / +2
Query: 614 LKN*LSTKVFRLHLPSLKGYFCLIQKFWMLLLS 516
LK + +KVFRL L SLKGYFCLIQKF MLLLS
Sbjct: 2 LKELIKSKVFRLLLLSLKGYFCLIQKFLMLLLS 100
Score = 51.0 bits (105), Expect(4) = 1e-054
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3 / -1
Query: 516 G*QQHPEFLDETEVALQARQVQSENL 593
G*QQH EFLDETEVALQA++ QSENL
Sbjct: 100 G*QQHQEFLDETEVALQAQKEQSENL 23
Score = 44.6 bits (91), Expect(4) = 2e-063
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3 / -3
Query: 153 MYTCPTNCVKLNVLLDKLRSVTCKPLRSI 239
+YT CVKLNVLLDKL S T KPLRSI
Sbjct: 632 IYTRNV*CVKLNVLLDKLCSATGKPLRSI 546
Score = 43.2 bits (88), Expect(4) = 5e-066
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 238 IERKGLHVTERSLSSNTFSLTQFVGHVYMVV 146
IERKGL V E+SLSS TFSLT VY+++
Sbjct: 547 IERKGLPVAEQSLSSKTFSLTHQTLRVYIII 639
Score = 41.4 bits (84), Expect(4) = 5e-066
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 159 YTWWCRMTCIEYWA*FTFT 103
+TW C +TCIEYW *FT+T
Sbjct: 683 HTWQCCVTCIEYWV*FTYT 739
Score = 38.6 bits (78), Expect(4) = 1e-054
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 175 VSS*MYCLISSAQ*HVNLYAQSDKFSN 255
VS+*M+CLISS Q VNLYAQ F +
Sbjct: 610 VSN*MFCLISSVQQQVNLYAQLTNFQS 530
Score = 37.7 bits (76), Expect(4) = 9e-057
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / +2
Query: 240 RLSVKVYMLLSGAYQAIHSA*H 175
+LSVKVY+LL+ AYQA HS *H
Sbjct: 545 QLSVKVYLLLNRAYQAKHSV*H 610
Score = 36.3 bits (73), Expect(3) = 2e-036
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 173 LCQAECIA**APLSNM*TFTLN 238
+CQ EC A**A SN *TFTLN
Sbjct: 612 MCQTECFA**ALFSNR*TFTLN 547
Score = 35.9 bits (72), Expect(4) = 4e-053
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 239 D*A*RFTCY*AELIKQYIQLDT 174
+*A*RFTC * ELIKQ IQ DT
Sbjct: 546 N*A*RFTCC*TELIKQNIQFDT 611
Score = 35.0 bits (70), Expect(4) = 2e-063
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 101 IVNVNQAQYSIQVIRHHHVYM 163
+V VNQ QYSIQV +H HV++
Sbjct: 741 VVYVNQTQYSIQVTQHCHVWL 679
Score = 34.5 bits (69), Expect(4) = 9e-057
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 157 YMVVSDDLYRILGLIYIHY 101
YM V LYRILGLIYIH+
Sbjct: 685 YMAVLCHLYRILGLIYIHH 741
Score = 33.1 bits (66), Expect(4) = 1e-054
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 109 CKSGPIFDTSHPTPPCI 159
CKS PIFDTS T PC+
Sbjct: 733 CKSDPIFDTSDTTLPCM 683
Score = 31.3 bits (62), Expect(3) = 2e-036
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3 / -3
Query: 108 M*IRPNIRYKSSDTTMY 158
M*IRPNIRYK +T MY
Sbjct: 734 M*IRPNIRYK*HNTAMY 684
Score = 30.9 bits (61), Expect(4) = 4e-053
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 158 IHGGVG*LVSNIGPDLHS 105
IHG V LVSNIG DLH+
Sbjct: 684 IHGSVVSLVSNIGSDLHT 737
>gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_80_A04_A002 3', mRNA sequence
Length = 681
Score = 201 bits (434), Expect(3) = 1e-063
Identities = 90/98 (91%), Positives = 92/98 (93%)
Frame = -2 / +2
Query: 561 GLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRV 382
GLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQVAYYKKLRRV
Sbjct: 2 GLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRV 181
Query: 381 TFVDSVPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
TFVDSVPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 182 TFVDSVPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 295
Score = 193 bits (417), Expect(3) = 1e-057
Identities = 83/94 (88%), Positives = 87/94 (92%)
Frame = -1 / +1
Query: 562 RATSVSSRNSGCCCYPVPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAGRILQKIEEG 383
RATSVSSRNSGCCCYPVPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAGRILQKIEEG
Sbjct: 1 RATSVSSRNSGCCCYPVPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAGRILQKIEEG 180
Query: 382 DLCGQRTKICFREDLEKRTHL*SQIIQAIASRLL 281
LCGQRTKICFR+D EKRT *SQI+QAIA++LL
Sbjct: 181 YLCGQRTKICFRKDFEKRTDR*SQIVQAIANQLL 282
Score = 191 bits (412), Expect(3) = 4e-059
Identities = 79/94 (84%), Positives = 82/94 (87%)
Frame = +1 / -3
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDLLFNKFLDINFSQRTL 459
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDLLFNKFLDINFSQRT
Sbjct: 283 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDLLFNKFLDINFSQRTH 104
Query: 460 RGPYDVSNRNFTSFSIGERDNNSIQNFWMRQK*P 561
RGPYDV NRNF SFSIGERDNNSIQNFWMRQK*P
Sbjct: 103 RGPYDVGNRNFPSFSIGERDNNSIQNFWMRQK*P 2
Score = 188 bits (405), Expect(3) = 2e-054
Identities = 86/94 (91%), Positives = 86/94 (91%)
Frame = -3 / +3
Query: 560 GYFCLIQKFWMLLLSRSPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSRSHTTKN*GG* 381
GYFCLIQKFWMLLLSRSPMLKL KFLL TS*GPL VL*LKLMSRNLLKSRSHTTKN*GG
Sbjct: 3 GYFCLIQKFWMLLLSRSPMLKLGKFLLPTS*GPL*VL*LKLMSRNLLKSRSHTTKN*GGL 182
Query: 380 PLWTAYQNLLQGRS*EENSSLKSDHPSYSKPASV 279
PLWTAYQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 183 PLWTAYQNLLQERF*EEN*SLKSDRPSYSKPASV 284
Score = 177 bits (381), Expect(3) = 1e-052
Identities = 79/88 (89%), Positives = 81/88 (92%)
Frame = +2 / -1
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS 445
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS
Sbjct: 297 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS 118
Query: 446 VKELSEDLTT*AIGTSPASASGNGITTA 529
VKEL+ DLTT*AIGTSPASASGNGITTA
Sbjct: 117 VKELTGDLTT*AIGTSPASASGNGITTA 34
Score = 162 bits (348), Expect(3) = 7e-047
Identities = 74/94 (78%), Positives = 76/94 (80%)
Frame = +3 / -2
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRPAFQ*ISGHQLQSKNS 458
+RS AIAW I* KQILVRCPQR PSSIFCSMRPAFQ*ISGHQLQSKNS
Sbjct: 284 NRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQR*PSSIFCSMRPAFQ*ISGHQLQSKNS 105
Query: 459 QRTLRRKQ*ELHQLQHRGTG*QQHPEFLDETEVA 560
Q TLRR+Q*EL QLQHRGTG*QQHPEFLDETEVA
Sbjct: 104 QGTLRRRQ*ELPQLQHRGTG*QQHPEFLDETEVA 3
Score = 44.6 bits (91), Expect(3) = 4e-059
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3 / -3
Query: 153 MYTCPTNCVKLNVLLDKLRSVTCKPLRSI 239
+YT CVKLNVLLDKL S T KPLRSI
Sbjct: 562 IYTRNV*CVKLNVLLDKLCSATGKPLRSI 476
Score = 43.2 bits (88), Expect(3) = 1e-063
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +3
Query: 238 IERKGLHVTERSLSSNTFSLTQFVGHVYMVV 146
IERKGL V E+SLSS TFSLT VY+++
Sbjct: 477 IERKGLPVAEQSLSSKTFSLTHQTLRVYIII 569
Score = 41.4 bits (84), Expect(3) = 1e-063
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 159 YTWWCRMTCIEYWA*FTFT 103
+TW C +TCIEYW *FT+T
Sbjct: 613 HTWQCCVTCIEYWV*FTYT 669
Score = 38.6 bits (78), Expect(3) = 1e-052
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 175 VSS*MYCLISSAQ*HVNLYAQSDKFSN 255
VS+*M+CLISS Q VNLYAQ F +
Sbjct: 540 VSN*MFCLISSVQQQVNLYAQLTNFQS 460
Score = 37.7 bits (76), Expect(3) = 1e-057
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / +1
Query: 240 RLSVKVYMLLSGAYQAIHSA*H 175
+LSVKVY+LL+ AYQA HS *H
Sbjct: 475 QLSVKVYLLLNRAYQAKHSV*H 540
Score = 36.3 bits (73), Expect(3) = 7e-047
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 173 LCQAECIA**APLSNM*TFTLN 238
+CQ EC A**A SN *TFTLN
Sbjct: 542 MCQTECFA**ALFSNR*TFTLN 477
Score = 35.9 bits (72), Expect(3) = 2e-054
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / +2
Query: 239 D*A*RFTCY*AELIKQYIQLDT 174
+*A*RFTC * ELIKQ IQ DT
Sbjct: 476 N*A*RFTCC*TELIKQNIQFDT 541
Score = 35.0 bits (70), Expect(3) = 4e-059
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 101 IVNVNQAQYSIQVIRHHHVYM 163
+V VNQ QYSIQV +H HV++
Sbjct: 671 VVYVNQTQYSIQVTQHCHVWL 609
Score = 34.5 bits (69), Expect(3) = 1e-057
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +3
Query: 157 YMVVSDDLYRILGLIYIHY 101
YM V LYRILGLIYIH+
Sbjct: 615 YMAVLCHLYRILGLIYIHH 671
Score = 33.1 bits (66), Expect(3) = 1e-052
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 109 CKSGPIFDTSHPTPPCI 159
CKS PIFDTS T PC+
Sbjct: 663 CKSDPIFDTSDTTLPCM 613
Score = 31.3 bits (62), Expect(3) = 7e-047
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3 / -3
Query: 108 M*IRPNIRYKSSDTTMY 158
M*IRPNIRYK +T MY
Sbjct: 664 M*IRPNIRYK*HNTAMY 614
Score = 30.9 bits (61), Expect(3) = 2e-054
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 158 IHGGVG*LVSNIGPDLHS 105
IHG V LVSNIG DLH+
Sbjct: 614 IHGSVVSLVSNIGSDLHT 667
>gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H11_A002 3', mRNA sequence
Length = 584
Score = 188 bits (406), Expect(2) = 6e-052
Identities = 84/93 (90%), Positives = 86/93 (92%)
Frame = -2 / +1
Query: 546 HPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDS 367
HPEILDAVVIPFPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQVAYYKKLRRV FVDS
Sbjct: 1 HPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVPFVDS 180
Query: 366 VPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
VPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 181 VPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 279
Score = 183 bits (394), Expect(2) = 8e-049
Identities = 77/88 (87%), Positives = 81/88 (92%)
Frame = -1 / +3
Query: 544 SRNSGCCCYPVPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAGRILQKIEEGDLCGQR 365
SRNSGCCCYPVPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAGRILQKIEEG LCGQR
Sbjct: 3 SRNSGCCCYPVPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAGRILQKIEEGSLCGQR 182
Query: 364 TKICFREDLEKRTHL*SQIIQAIASRLL 281
TKICFR+D EKRT *SQI+QAIA++LL
Sbjct: 183 TKICFRKDFEKRTDR*SQIVQAIANQLL 266
Score = 181 bits (389), Expect(2) = 2e-050
Identities = 74/89 (83%), Positives = 77/89 (86%)
Frame = +1 / -3
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDLLFNKFLDINFSQRTL 459
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDLLFNKFLDINFSQRT
Sbjct: 267 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDLLFNKFLDINFSQRTH 88
Query: 460 RGPYDVSNRNFTSFSIGERDNNSIQNFWM 546
RGPYDV NRNF SFSIGERDNNSIQNFWM
Sbjct: 87 RGPYDVGNRNFPSFSIGERDNNSIQNFWM 1
Score = 174 bits (374), Expect(2) = 5e-046
Identities = 78/88 (88%), Positives = 80/88 (90%)
Frame = +2 / -1
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS 445
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTK TLLNFL*YATCFSINFWTSTS
Sbjct: 281 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKGTLLNFL*YATCFSINFWTSTS 102
Query: 446 VKELSEDLTT*AIGTSPASASGNGITTA 529
VKEL+ DLTT*AIGTSPASASGNGITTA
Sbjct: 101 VKELTGDLTT*AIGTSPASASGNGITTA 18
Score = 173 bits (373), Expect(2) = 9e-046
Identities = 81/89 (91%), Positives = 81/89 (91%)
Frame = -3 / +2
Query: 545 IQKFWMLLLSRSPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSRSHTTKN*GG*PLWTA 366
IQKFWMLLLSRSPMLKL KFLL TS*GPL VL*LKLMSRNLLKSRSHTTKN*GG PLWTA
Sbjct: 2 IQKFWMLLLSRSPMLKLGKFLLPTS*GPL*VL*LKLMSRNLLKSRSHTTKN*GGFPLWTA 181
Query: 365 YQNLLQGRS*EENSSLKSDHPSYSKPASV 279
YQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 182 YQNLLQERF*EEN*SLKSDRPSYSKPASV 268
Score = 153 bits (329), Expect(2) = 2e-038
Identities = 69/89 (77%), Positives = 71/89 (79%)
Frame = +3 / -2
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRPAFQ*ISGHQLQSKNS 458
+RS AIAW I* KQILVRCPQR PSSIFCSMRPAFQ*ISGHQLQSKNS
Sbjct: 268 NRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQREPSSIFCSMRPAFQ*ISGHQLQSKNS 89
Query: 459 QRTLRRKQ*ELHQLQHRGTG*QQHPEFLD 545
Q TLRR+Q*EL QLQHRGTG*QQHPEFLD
Sbjct: 88 QGTLRRRQ*ELPQLQHRGTG*QQHPEFLD 2
Score = 41.4 bits (84), Expect(2) = 2e-050
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / -3
Query: 153 MYTCPTNCVKLNVLLDKLRSVTCKPLRSI 239
+YT CVKLN LLDKL S T KPLRSI
Sbjct: 546 IYTRNV*CVKLNGLLDKLCSATGKPLRSI 460
Score = 38.6 bits (78), Expect(2) = 6e-052
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -1 / +2
Query: 238 IERKGLHVTERSLSSNTFSLTQFVGHVYMVV 146
IERKG V E+SLSS FSLT VY+++
Sbjct: 461 IERKGFPVAEQSLSSKPFSLTHQTLRVYIII 553
Score = 33.6 bits (67), Expect(2) = 8e-049
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 240 RLSVKVYMLLSGAYQAIHSA*H 175
+LSVKV +LL+ AYQA HS *H
Sbjct: 459 QLSVKVSLLLNRAYQANHSV*H 524
Score = 33.6 bits (67), Expect(2) = 5e-046
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1 / -1
Query: 175 VSS*MYCLISSAQ*HVNLYAQSDKFSN 255
VS+*M CLISS Q NLYAQ F +
Sbjct: 524 VSN*MVCLISSVQQQGNLYAQLTNFQS 444
Score = 33.1 bits (66), Expect(2) = 9e-046
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / +1
Query: 239 D*A*RFTCY*AELIKQYIQLDT 174
+*A*RF C * ELIKQ IQ DT
Sbjct: 460 N*A*RFPCC*TELIKQTIQFDT 525
Score = 29.0 bits (57), Expect(2) = 2e-038
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 173 LCQAECIA**APLSNM*TFTLN 238
+CQ E A**A SN TFTLN
Sbjct: 526 MCQTEWFA**ALFSNRETFTLN 461
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 193 bits (416), Expect = 2e-048
Identities = 80/125 (64%), Positives = 97/125 (77%)
Frame = -2 / +2
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDA 502
GWL TGD+ Y DE G LFVVDRLKELIKYKG+Q+ PAELE LLL+H EI D VIPFPD
Sbjct: 74 GWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHSEIQDVAVIPFPDR 253
Query: 501 EAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELI 322
E G+ P+AYVVR S+L+E +V +F+ KQVA YKK+R+V FV +PK+ASGKILR++LI
Sbjct: 254 EVGQFPMAYVVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVTEIPKNASGKILRKDLI 433
Query: 321 SKVRS 307
S
Sbjct: 434 KLATS 448
>gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197397, DNA
sequence
Length = 664
Score = 99.6 bits (211), Expect(3) = 1e-047
Identities = 44/56 (78%), Positives = 47/56 (83%)
Frame = +2 / -2
Query: 260 RRSSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSIN 427
R SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTLLNFL*YATC ++
Sbjct: 627 RASSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCKGVH 460
Score = 97.3 bits (206), Expect(3) = 3e-047
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -2 / +2
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
QVAYYKKLRRVTFVDSVPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 473 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 619
Score = 91.3 bits (193), Expect(3) = 5e-044
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = -3 / +3
Query: 422 LKSRSHTTKN*GG*PLWTAYQNLLQGRS*EENSSLKSDHPSYSKPASV 279
L RSHTTKN*GG PLWTAYQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 465 LPYRSHTTKN*GGLPLWTAYQNLLQERF*EEN*SLKSDRPSYSKPASV 608
Score = 85.4 bits (180), Expect(3) = 1e-038
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1 / +1
Query: 412 GRILQKIEEGDLCGQRTKICFREDLEKRTHL*SQIIQAIASRLLCSEARTP 260
GRILQKIEEG LCGQRTKICFR+D EKRT *SQI+QAIA++LL + P
Sbjct: 475 GRILQKIEEGYLCGQRTKICFRKDFEKRTDR*SQIVQAIANQLLFRKTACP 627
Score = 80.8 bits (170), Expect(3) = 5e-042
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +1 / -1
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDL 414
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDL
Sbjct: 607 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDL 473
Score = 79.9 bits (168), Expect(3) = 5e-042
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2 / -2
Query: 395 FL*YATCFSINFWTSTSVKELSEDLTT*AIGTSPASASGN 514
FL TCFSINFWTSTSVKEL+ DLTT*AIGTSPASASGN
Sbjct: 318 FLHRLTCFSINFWTSTSVKELTGDLTT*AIGTSPASASGN 199
Score = 77.1 bits (162), Expect(3) = 3e-047
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / +2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
FPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQV+ + L
Sbjct: 200 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 322
Score = 75.8 bits (159), Expect(3) = 1e-047
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1 / -1
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSIGE 513
LLFNKFLDINFSQRT RGPYDV NRNF SFSIGE
Sbjct: 301 LLFNKFLDINFSQRTHRGPYDVGNRNFPSFSIGE 200
Score = 73.5 bits (154), Expect(3) = 5e-044
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / +1
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAG 410
VPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAG
Sbjct: 199 VPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAG 303
Score = 73.0 bits (153), Expect(2) = 5e-024
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3 / -3
Query: 411 PAFQ*ISGHQLQSKNSQRTLRRKQ*ELHQLQHRGT 515
PAFQ*ISGHQLQSKNSQ TLRR+Q*EL QLQHRGT
Sbjct: 302 PAFQ*ISGHQLQSKNSQGTLRRRQ*ELPQLQHRGT 198
Score = 62.0 bits (129), Expect(3) = 1e-038
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -3 / +3
Query: 512 SPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSR 411
SPMLKL KFLL TS*GPL VL*LKLMSRNLLKSR
Sbjct: 201 SPMLKLGKFLLPTS*GPL*VL*LKLMSRNLLKSR 302
Score = 61.1 bits (127), Expect(2) = 5e-024
Identities = 29/51 (56%), Positives = 30/51 (58%)
Frame = +3 / -3
Query: 261 GVLASEHRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRP 413
G +RS AIAW I* KQILVRCPQR PSSIFCSMRP
Sbjct: 626 GQAVLRNRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQR*PSSIFCSMRP 474
Score = 57.4 bits (119), Expect(3) = 1e-047
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1 / -3
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDNNSIQNFWMRQK*PFKL CNL
Sbjct: 92 RDNNSIQNFWMRQK*PFKLSGCNL 21
Score = 57.0 bits (118), Expect(3) = 3e-047
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +3
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDAVVIP
Sbjct: 18 WQIAPAELEGLLLSHPEILDAVVIP 92
Score = 55.6 bits (115), Expect(3) = 5e-044
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / +2
Query: 586 SDCTCRA*RATSVSSRNSGCCCYPV 512
+DCT A*RATSVSSRNSGCCCYPV
Sbjct: 20 ADCTR*A*RATSVSSRNSGCCCYPV 94
Score = 54.7 bits (113), Expect(3) = 1e-038
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / +1
Query: 584 RLHLPSLKGYFCLIQKFWMLLLSR 513
RLH SLKGYFCLIQKFWMLLLSR
Sbjct: 22 RLHPLSLKGYFCLIQKFWMLLLSR 93
Score = 52.8 bits (109), Expect(3) = 5e-042
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3 / -2
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQHPEFLDETEVALQA++VQS
Sbjct: 93 TG*QQHPEFLDETEVALQAQRVQS 22
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 191 bits (411), Expect = 1e-047
Identities = 75/126 (59%), Positives = 101/126 (80%)
Frame = -2 / +1
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 505
+GWL TGD+ YF+E G L++VDRLKELIKYKG+Q+ PAELE +L SHP+I+DA VIP+PD
Sbjct: 13 EGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPD 192
Query: 504 AEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRREL 325
+ G++P+A++VR S+LT+ V F+ KQVA YKK+RRV FV ++PKS +GKILRREL
Sbjct: 193 EDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 372
Query: 324 ISKVRS 307
+ + S
Sbjct: 373 VEQAVS 390
>gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_17_E08_A002 3', mRNA sequence
Length = 516
Score = 175 bits (376), Expect(2) = 3e-045
Identities = 80/91 (87%), Positives = 82/91 (90%)
Frame = -2 / +1
Query: 540 EILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVP 361
EILDAVVIPFPDAEAGEVPI YVVRS SSLTEVDVQKFIEKQVAY KKLRRV FVDSVP
Sbjct: 1 EILDAVVIPFPDAEAGEVPIPYVVRSPVSSLTEVDVQKFIEKQVAYSKKLRRVPFVDSVP 180
Query: 360 KSASGKILRRELISKVRSSKL*QAGFCVQKL 268
KSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 181 KSASGKILRRELIAKVRSSKL*QPSFCFVRL 273
Score = 174 bits (375), Expect(2) = 5e-045
Identities = 74/86 (86%), Positives = 78/86 (90%)
Frame = -1 / +3
Query: 538 NSGCCCYPVPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAGRILQKIEEGDLCGQRTK 359
NSGCCCYPVPRC*SW SSY LRRKV EFFD*S*CPEIY*KAGRILQKIEEG LCGQRTK
Sbjct: 3 NSGCCCYPVPRC*SWGSSYSLRRKVPCEFFD*S*CPEIY*KAGRILQKIEEGSLCGQRTK 182
Query: 358 ICFREDLEKRTHL*SQIIQAIASRLL 281
ICFR+D EKRT *SQI+QAIA++LL
Sbjct: 183 ICFRKDFEKRTDR*SQIVQAIATQLL 260
Score = 170 bits (366), Expect(2) = 5e-044
Identities = 71/87 (81%), Positives = 74/87 (85%)
Frame = +1 / -1
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDLLFNKFLDINFSQRTL 459
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFF VCDLLFNKFLDINFSQRT
Sbjct: 261 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFGVCDLLFNKFLDINFSQRTH 82
Query: 460 RGPYDVSNRNFTSFSIGERDNNSIQNF 540
RGPYDV NRNF SFSIGERDNNSIQNF
Sbjct: 81 RGPYDVGNRNFPSFSIGERDNNSIQNF 1
Score = 170 bits (365), Expect(3) = 2e-047
Identities = 76/88 (86%), Positives = 78/88 (88%)
Frame = +2 / -2
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTS 445
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTK TLLNFL YATCFSINFWTSTS
Sbjct: 275 SSLTKQKLGCYSLDDLTLAISSLLKIFPEADFGTLSTKGTLLNFLEYATCFSINFWTSTS 96
Query: 446 VKELSEDLTT*AIGTSPASASGNGITTA 529
VKEL+ DLTT* IGTSPASASGNGITTA
Sbjct: 95 VKELTGDLTT*GIGTSPASASGNGITTA 12
Score = 162 bits (349), Expect(2) = 6e-041
Identities = 76/87 (87%), Positives = 76/87 (87%)
Frame = -3 / +2
Query: 539 KFWMLLLSRSPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSRSHTTKN*GG*PLWTAYQ 360
KFWMLLLSRSPMLKL KFL TS*GPL VL*LKLMSRNLLKSRSHT KN*GG PLWTAYQ
Sbjct: 2 KFWMLLLSRSPMLKLGKFLFPTS*GPL*VL*LKLMSRNLLKSRSHTPKN*GGFPLWTAYQ 181
Query: 359 NLLQGRS*EENSSLKSDHPSYSKPASV 279
NLLQ R *EEN SLKSD PSYS PASV
Sbjct: 182 NLLQERF*EEN*SLKSDRPSYSNPASV 262
Score = 143 bits (306), Expect(2) = 4e-034
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = +3 / -3
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRPAFQ*ISGHQLQSKNS 458
+RS +AIAW I* KQILVRCPQR PSSIF SMRPAFQ*ISGHQLQSKNS
Sbjct: 262 NRSWVAIAWTI*L*RSVLFSKSFLKQILVRCPQREPSSIFWSMRPAFQ*ISGHQLQSKNS 83
Query: 459 QRTLRRKQ*ELHQLQHRGTG*QQHPEF 539
Q TLRR++*EL QLQHRGTG*QQHPEF
Sbjct: 82 QGTLRRRE*ELPQLQHRGTG*QQHPEF 2
Score = 33.6 bits (67), Expect(3) = 2e-047
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / -1
Query: 180 KLNVLLDKLRSVTCKPLRSI 239
KLN LLDKL S T KPLRSI
Sbjct: 513 KLNGLLDKLWSATGKPLRSI 454
Score = 30.4 bits (60), Expect(2) = 5e-044
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1 / -2
Query: 178 SS*MYCLISSAQ*HVNLYAQSDKFSN 255
++*M CLISS Q NLYAQ F +
Sbjct: 515 AN*MVCLISSGQQQGNLYAQLTNFQS 438
Score = 29.9 bits (59), Expect(2) = 3e-045
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1 / +2
Query: 238 IERKGLHVTERSLSSNTFSL 179
IERKG V ++SLSS FSL
Sbjct: 455 IERKGFPVADQSLSSKPFSL 514
Score = 29.5 bits (58), Expect(2) = 5e-045
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +3
Query: 240 RLSVKVYMLLSGAYQAIHS 184
+LSVKV +LL+ AYQA HS
Sbjct: 453 QLSVKVSLLLTRAYQANHS 509
Score = 27.6 bits (54), Expect(2) = 6e-041
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 239 D*A*RFTCY*AELIKQYIQ 183
+*A*RF C * ELIKQ IQ
Sbjct: 454 N*A*RFPCC*PELIKQTIQ 510
Score = 25.4 bits (49), Expect(3) = 2e-047
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 223 NLYAQSDKFSNWKAF*LL 276
N + + F NWK+F*LL
Sbjct: 449 NFQSSTPSFPNWKSF*LL 396
Score = 24.4 bits (47), Expect(2) = 4e-034
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 179 QAECIA**APLSNM*TFTLN 238
Q E A**A +SN TFTLN
Sbjct: 514 QTEWFA**ALVSNRETFTLN 455
>gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470125, DNA
sequence
Length = 682
Score = 97.7 bits (207), Expect(3) = 4e-047
Identities = 43/54 (79%), Positives = 46/54 (85%)
Frame = +2 / -1
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSIN 427
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTLLNFL*YATC ++
Sbjct: 637 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCKGVH 476
Score = 97.3 bits (206), Expect(3) = 3e-047
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -2 / +3
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
QVAYYKKLRRVTFVDSVPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 489 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 635
Score = 91.3 bits (193), Expect(3) = 5e-044
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = -3 / +1
Query: 422 LKSRSHTTKN*GG*PLWTAYQNLLQGRS*EENSSLKSDHPSYSKPASV 279
L RSHTTKN*GG PLWTAYQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 481 LPYRSHTTKN*GGLPLWTAYQNLLQERF*EEN*SLKSDRPSYSKPASV 624
Score = 84.0 bits (177), Expect(3) = 3e-038
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1 / +2
Query: 412 GRILQKIEEGDLCGQRTKICFREDLEKRTHL*SQIIQAIASRLL 281
GRILQKIEEG LCGQRTKICFR+D EKRT *SQI+QAIA++LL
Sbjct: 491 GRILQKIEEGYLCGQRTKICFRKDFEKRTDR*SQIVQAIANQLL 622
Score = 80.8 bits (170), Expect(3) = 5e-042
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +1 / -3
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDL 414
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDL
Sbjct: 623 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDL 489
Score = 79.9 bits (168), Expect(3) = 5e-042
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2 / -1
Query: 395 FL*YATCFSINFWTSTSVKELSEDLTT*AIGTSPASASGN 514
FL TCFSINFWTSTSVKEL+ DLTT*AIGTSPASASGN
Sbjct: 334 FLHRLTCFSINFWTSTSVKELTGDLTT*AIGTSPASASGN 215
Score = 77.1 bits (162), Expect(3) = 3e-047
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / +3
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
FPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQV+ + L
Sbjct: 216 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 338
Score = 75.8 bits (159), Expect(3) = 4e-047
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1 / -3
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSIGE 513
LLFNKFLDINFSQRT RGPYDV NRNF SFSIGE
Sbjct: 317 LLFNKFLDINFSQRTHRGPYDVGNRNFPSFSIGE 216
Score = 73.5 bits (154), Expect(3) = 5e-044
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / +2
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAG 410
VPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAG
Sbjct: 215 VPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAG 319
Score = 73.0 bits (153), Expect(2) = 7e-024
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3 / -2
Query: 411 PAFQ*ISGHQLQSKNSQRTLRRKQ*ELHQLQHRGT 515
PAFQ*ISGHQLQSKNSQ TLRR+Q*EL QLQHRGT
Sbjct: 318 PAFQ*ISGHQLQSKNSQGTLRRRQ*ELPQLQHRGT 214
Score = 62.0 bits (129), Expect(3) = 3e-038
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -3 / +1
Query: 512 SPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSR 411
SPMLKL KFLL TS*GPL VL*LKLMSRNLLKSR
Sbjct: 217 SPMLKLGKFLLPTS*GPL*VL*LKLMSRNLLKSR 318
Score = 60.6 bits (126), Expect(2) = 7e-024
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +3 / -2
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRP 413
+RS AIAW I* KQILVRCPQR PSSIFCSMRP
Sbjct: 624 NRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQR*PSSIFCSMRP 490
Score = 57.4 bits (119), Expect(3) = 4e-047
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDNNSIQNFWMRQK*PFKL CNL
Sbjct: 108 RDNNSIQNFWMRQK*PFKLSGCNL 37
Score = 57.0 bits (118), Expect(3) = 3e-047
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +1
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDAVVIP
Sbjct: 34 WQIAPAELEGLLLSHPEILDAVVIP 108
Score = 55.6 bits (115), Expect(3) = 5e-044
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 586 SDCTCRA*RATSVSSRNSGCCCYPV 512
+DCT A*RATSVSSRNSGCCCYPV
Sbjct: 36 ADCTR*A*RATSVSSRNSGCCCYPV 110
Score = 54.7 bits (113), Expect(3) = 3e-038
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / +2
Query: 584 RLHLPSLKGYFCLIQKFWMLLLSR 513
RLH SLKGYFCLIQKFWMLLLSR
Sbjct: 38 RLHPLSLKGYFCLIQKFWMLLLSR 109
Score = 52.8 bits (109), Expect(3) = 5e-042
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3 / -1
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQHPEFLDETEVALQA++VQS
Sbjct: 109 TG*QQHPEFLDETEVALQAQRVQS 38
>gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180005, DNA
sequence
Length = 706
Score = 97.7 bits (207), Expect(3) = 4e-047
Identities = 43/54 (79%), Positives = 46/54 (85%)
Frame = +2 / +3
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSIN 427
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTLLNFL*YATC ++
Sbjct: 72 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCKGVH 233
Score = 97.3 bits (206), Expect(3) = 3e-047
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -2 / -1
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
QVAYYKKLRRVTFVDSVPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 220 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 74
Score = 91.3 bits (193), Expect(3) = 5e-044
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = -3 / -2
Query: 422 LKSRSHTTKN*GG*PLWTAYQNLLQGRS*EENSSLKSDHPSYSKPASV 279
L RSHTTKN*GG PLWTAYQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 228 LPYRSHTTKN*GGLPLWTAYQNLLQERF*EEN*SLKSDRPSYSKPASV 85
Score = 84.0 bits (177), Expect(3) = 4e-038
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1 / -3
Query: 412 GRILQKIEEGDLCGQRTKICFREDLEKRTHL*SQIIQAIASRLL 281
GRILQKIEEG LCGQRTKICFR+D EKRT *SQI+QAIA++LL
Sbjct: 218 GRILQKIEEGYLCGQRTKICFRKDFEKRTDR*SQIVQAIANQLL 87
Score = 80.8 bits (170), Expect(3) = 6e-042
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +1 / +2
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDL 414
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDL
Sbjct: 86 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDL 220
Score = 79.9 bits (168), Expect(3) = 6e-042
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2 / +3
Query: 395 FL*YATCFSINFWTSTSVKELSEDLTT*AIGTSPASASGN 514
FL TCFSINFWTSTSVKEL+ DLTT*AIGTSPASASGN
Sbjct: 375 FLHRLTCFSINFWTSTSVKELTGDLTT*AIGTSPASASGN 494
Score = 77.1 bits (162), Expect(3) = 3e-047
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / -1
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
FPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQV+ + L
Sbjct: 493 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 371
Score = 75.8 bits (159), Expect(3) = 4e-047
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1 / +2
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSIGE 513
LLFNKFLDINFSQRT RGPYDV NRNF SFSIGE
Sbjct: 392 LLFNKFLDINFSQRTHRGPYDVGNRNFPSFSIGE 493
Score = 73.5 bits (154), Expect(3) = 5e-044
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / -3
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAG 410
VPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAG
Sbjct: 494 VPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAG 390
Score = 73.0 bits (153), Expect(2) = 7e-024
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3 / +1
Query: 411 PAFQ*ISGHQLQSKNSQRTLRRKQ*ELHQLQHRGT 515
PAFQ*ISGHQLQSKNSQ TLRR+Q*EL QLQHRGT
Sbjct: 391 PAFQ*ISGHQLQSKNSQGTLRRRQ*ELPQLQHRGT 495
Score = 62.0 bits (129), Expect(3) = 4e-038
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -3 / -2
Query: 512 SPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSR 411
SPMLKL KFLL TS*GPL VL*LKLMSRNLLKSR
Sbjct: 492 SPMLKLGKFLLPTS*GPL*VL*LKLMSRNLLKSR 391
Score = 60.6 bits (126), Expect(2) = 7e-024
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +3 / +1
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRP 413
+RS AIAW I* KQILVRCPQR PSSIFCSMRP
Sbjct: 85 NRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQR*PSSIFCSMRP 219
Score = 57.4 bits (119), Expect(3) = 4e-047
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1 / +1
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDNNSIQNFWMRQK*PFKL CNL
Sbjct: 601 RDNNSIQNFWMRQK*PFKLSGCNL 672
Score = 57.0 bits (118), Expect(3) = 3e-047
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / -2
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDAVVIP
Sbjct: 675 WQIAPAELEGLLLSHPEILDAVVIP 601
Score = 55.6 bits (115), Expect(3) = 5e-044
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / -1
Query: 586 SDCTCRA*RATSVSSRNSGCCCYPV 512
+DCT A*RATSVSSRNSGCCCYPV
Sbjct: 673 ADCTR*A*RATSVSSRNSGCCCYPV 599
Score = 54.7 bits (113), Expect(3) = 4e-038
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / -3
Query: 584 RLHLPSLKGYFCLIQKFWMLLLSR 513
RLH SLKGYFCLIQKFWMLLLSR
Sbjct: 671 RLHPLSLKGYFCLIQKFWMLLLSR 600
Score = 52.8 bits (109), Expect(3) = 6e-042
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3 / +3
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQHPEFLDETEVALQA++VQS
Sbjct: 600 TG*QQHPEFLDETEVALQAQRVQS 671
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 188 bits (404), Expect = 1e-046
Identities = 74/126 (58%), Positives = 100/126 (79%)
Frame = -2 / +1
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 505
+GWL TGD+ YF+E G L++VDRLKELIKYKG+Q+ PAEL +L SHP+I+DA VIP+PD
Sbjct: 61 EGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELGHILNSHPDIMDAAVIPYPD 240
Query: 504 AEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRREL 325
+ G++P+A++VR S+LT+ V F+ KQVA YKK+RRV FV ++PKS +GKILRREL
Sbjct: 241 EDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 420
Query: 324 ISKVRS 307
+ + S
Sbjct: 421 VEQAVS 438
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 187 bits (402), Expect = 2e-046
Identities = 69/127 (54%), Positives = 101/127 (79%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWL TGDIGY D+ ++F+VDRLKELIKYKGFQ+APAELE +L++HP I DA V+P
Sbjct: 248 DEGWLDTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVPMK 427
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 328
D GE+P+A+VV S +TE ++++++ KQV +YK+L +V FV+++PK+ SGKILR++
Sbjct: 428 DDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKD 607
Query: 327 LISKVRS 307
L +K+ S
Sbjct: 608 LRAKLAS 628
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 186 bits (401), Expect = 3e-046
Identities = 68/125 (54%), Positives = 101/125 (80%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
+ GWLHTGDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 93 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMK 272
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 328
D AGE+P+A++VR+ S +TE ++++F+ K+V +YKK+ +V F +S+PK+ SGKILR++
Sbjct: 273 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKD 452
Query: 327 LISKV 313
L +++
Sbjct: 453 LRARL 467
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 185 bits (398), Expect = 7e-046
Identities = 73/119 (61%), Positives = 93/119 (78%)
Frame = -2 / +1
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDA 502
GWLHTGD+GY D+ G +F+VDR+KELIKYKGFQ+APAELE +LLSHP + DA V PD
Sbjct: 67 GWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDE 246
Query: 501 EAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRREL 325
EAGEVP + VVR + +E D+ ++ ++VA YKKLR + FVD++PKS SGKILRR+L
Sbjct: 247 EAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRRQL 423
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 174 bits (375), Expect = 1e-042
Identities = 65/121 (53%), Positives = 97/121 (80%)
Frame = -2 / +3
Query: 675 LHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEA 496
LHTGDIGY D+ ++F+VDRLKE+IKYKG Q+ PAELE LL++HPEI DA V+ D A
Sbjct: 3 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLA 182
Query: 495 GEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISK 316
GE+P+A++VR+ S +TE ++++F+ K+V +YKK+ +V F +S+PK+ SGKILR++L ++
Sbjct: 183 GEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDLRAR 362
Query: 315 V 313
+
Sbjct: 363 L 365
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 111 bits (236), Expect(2) = 3e-042
Identities = 39/58 (67%), Positives = 51/58 (87%)
Frame = -2 / -1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIP 514
++GWLHTGD+GY D+ ++F+VDRLKELIKYKGFQ+APAELE +L++HP I DA V+P
Sbjct: 608 DEGWLHTGDMGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVP 435
Score = 82.2 bits (173), Expect(2) = 3e-042
Identities = 30/67 (44%), Positives = 51/67 (76%)
Frame = -2 / -3
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 328
D GE+P+A+VV S +TE ++++++ KQV +YK+L +V FV+++PK+ SGKILR++
Sbjct: 318 DDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKD 139
Query: 327 LISKVRS 307
L +K+ S
Sbjct: 138 LRAKLAS 118
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 101 bits (215), Expect(2) = 4e-041
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = -2 / +2
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
GWLHTGD+G+ D+ ++F+VDRLKE+IKYKG Q+APAE+E LL++HP I DA V+
Sbjct: 464 GWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 628
Score = 88.1 bits (186), Expect(2) = 4e-041
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2 / +2
Query: 528 AVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSAS 349
AVV + E GE+P+A+V ++ S L+E DV++F+ K+V YYKK+R V F+D +PK+ S
Sbjct: 620 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 799
Query: 348 GKILRREL 325
GKILR+EL
Sbjct: 800 GKILRKEL 823
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 101 bits (215), Expect(2) = 4e-041
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = -2 / +2
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
GWLHTGD+G+ D+ ++F+VDRLKE+IKYKG Q+APAE+E LL++HP I DA V+
Sbjct: 71 GWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 235
Score = 88.1 bits (186), Expect(2) = 4e-041
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2 / +2
Query: 528 AVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSAS 349
AVV + E GE+P+A+V ++ S L+E DV++F+ K+V YYKK+R V F+D +PK+ S
Sbjct: 227 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 406
Query: 348 GKILRREL 325
GKILR+EL
Sbjct: 407 GKILRKEL 430
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 101 bits (215), Expect(2) = 4e-041
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = -2 / +1
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
GWLHTGD+G+ D+ ++F+VDRLKE+IKYKG Q+APAE+E LL++HP I DA V+
Sbjct: 232 GWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 396
Score = 88.1 bits (186), Expect(2) = 4e-041
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2 / +1
Query: 528 AVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSAS 349
AVV + E GE+P+A+V ++ S L+E DV++F+ K+V YYKK+R V F+D +PK+ S
Sbjct: 388 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 567
Query: 348 GKILRREL 325
GKILR+EL
Sbjct: 568 GKILRKEL 591
>gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f170n20, DNA
sequence
Length = 679
Score = 84.5 bits (178), Expect(3) = 5e-041
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -2 / -1
Query: 690 IEQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
I+QGWLHTGD+GYFDE GQL VVDRLKELIKYKGFQ+
Sbjct: 640 IKQGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQV 530
Score = 70.7 bits (148), Expect(3) = 5e-041
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -2 / -2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
+PD EAGEVPIAYVVRS +SSL EVDVQKFIEKQV
Sbjct: 207 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 103
Score = 65.7 bits (137), Expect(3) = 4e-028
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 410 TCFSINFWTSTSVKELSEDLTT*AIGTSPASASG 511
TCFSINFWTSTS EL D TT*AIGTSPAS SG
Sbjct: 104 TCFSINFWTSTSASELFGDRTT*AIGTSPASGSG 205
Score = 61.1 bits (127), Expect(3) = 4e-028
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 583 LKTFVLNQFFKSINYEKLTSLIKVSNITSMQPPLLD 690
L+ FVLNQ FKSI+ KL S IKVS ITSMQPPLLD
Sbjct: 533 LEAFVLNQLFKSIDNMKLASFIKVSKITSMQPPLLD 640
Score = 55.1 bits (114), Expect(3) = 5e-041
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / -1
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDA VIP
Sbjct: 361 WQIAPAELEGLLLSHPEILDAAVIP 287
Score = 52.4 bits (108), Expect(3) = 6e-021
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 588 NLCT*SVL*VYQLRKADLPHQSIQYHQYATTLA 686
+LCT*S L*VY+ +A L HQSIQ HQYATTLA
Sbjct: 538 SLCT*SAL*VYRQHEAGLFHQSIQDHQYATTLA 636
Score = 50.1 bits (103), Expect(3) = 6e-021
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSI 507
LLF+KFLDINFSQ TL PY++ +RNF F I
Sbjct: 106 LLFDKFLDINFSQ*TLW*PYNIGDRNFPCFGI 201
Score = 39.6 bits (80), Expect(3) = 6e-021
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / +2
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDN+SI+NF MRQK FKL R NL
Sbjct: 287 RDNSSIKNFRMRQKQSFKLSRSNL 358
Score = 39.6 bits (80), Expect(3) = 4e-028
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / +1
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQH EF DET+ LQA+Q QS
Sbjct: 286 TG*QQHQEFQDETKAILQAQQEQS 357
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 107 bits (229), Expect(2) = 6e-041
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -2 / +3
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVV 520
GWLHTGD+GY D+ G +F+VDR+KELIKYKGFQ+APAELE +LLSHP + DA V
Sbjct: 297 GWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 458
Score = 81.3 bits (171), Expect(2) = 6e-041
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = -2 / +2
Query: 510 PDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRR 331
PD EAGEVP + VVR + +E D+ ++ ++VA YKKLR + FVD++PKS SGKILRR
Sbjct: 545 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 724
Query: 330 EL 325
+L
Sbjct: 725 QL 730
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 107 bits (229), Expect(2) = 6e-041
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -2 / +2
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVV 520
GWLHTGD+GY D+ G +F+VDR+KELIKYKGFQ+APAELE +LLSHP + DA V
Sbjct: 140 GWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 301
Score = 81.3 bits (171), Expect(2) = 6e-041
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = -2 / +1
Query: 510 PDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRR 331
PD EAGEVP + VVR + +E D+ ++ ++VA YKKLR + FVD++PKS SGKILRR
Sbjct: 388 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 567
Query: 330 EL 325
+L
Sbjct: 568 QL 573
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 123 bits (264), Expect(2) = 9e-039
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = -2 / +3
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDA 502
GWL TGDI Y+D G ++VDRLKELIK KGFQ+APAELE +LL+HP+I DA VIP PD
Sbjct: 177 GWLRTGDIAYYDREGYFYIVDRLKELIKTKGFQVAPAELEAILLTHPKIADAAVIPSPDE 356
Query: 501 EAGEVPIAYVV 469
AGEVP A+VV
Sbjct: 357 RAGEVPKAFVV 389
Score = 57.9 bits (120), Expect(2) = 9e-039
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = -2 / +3
Query: 474 VVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKVR 310
V + + L E +V F+ +VA++K+L V FV+++PK++SGKILRR+L + R
Sbjct: 387 VAKPNAGPLAEAEVMDFVAGKVAHFKRLHFVEFVEAIPKTSSGKILRRDLKERER 551
>gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 655
Score = 76.2 bits (160), Expect(3) = 1e-038
Identities = 33/41 (80%), Positives = 40/41 (97%)
Frame = -2 / -1
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*Q 292
QVA+YK+LR+V FVDSVPKSA+GKILRRELI++VRSSKL*+
Sbjct: 175 QVAHYKRLRKVKFVDSVPKSAAGKILRRELIAQVRSSKL*R 53
Score = 70.7 bits (148), Expect(3) = 1e-038
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -2 / -3
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
+PD EAGEVPIAYVVRS +SSL EVDVQKFIEKQV
Sbjct: 467 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 363
Score = 65.7 bits (137), Expect(3) = 2e-029
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 410 TCFSINFWTSTSVKELSEDLTT*AIGTSPASASG 511
TCFSINFWTSTS EL D TT*AIGTSPAS SG
Sbjct: 364 TCFSINFWTSTSASELFGDRTT*AIGTSPASGSG 465
Score = 65.2 bits (136), Expect(3) = 2e-029
Identities = 30/39 (76%), Positives = 31/39 (79%)
Frame = +2 / +3
Query: 296 YSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YAT 412
YSLDDLT MSSLLKIFP ADFGTLST T L+ L* AT
Sbjct: 57 YSLDDLTWAMSSLLKIFPAADFGTLSTNFTFLSLL*CAT 173
Score = 55.1 bits (114), Expect(3) = 1e-038
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / -2
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDA VIP
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVIP 547
Score = 39.6 bits (80), Expect(3) = 2e-029
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / +3
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQH EF DET+ LQA+Q QS
Sbjct: 546 TG*QQHQEFQDETKAILQAQQEQS 617
>gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 721
Score = 107 bits (228), Expect(3) = 3e-037
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
+ GWLHTGDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 41 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 211
Score = 48.3 bits (99), Expect(3) = 3e-037
Identities = 17/34 (50%), Positives = 28/34 (82%)
Frame = -2 / +2
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
QV +YKK+ +V F +S+PK+ SGKILR++L +++
Sbjct: 584 QVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 685
Score = 41.8 bits (85), Expect(3) = 3e-037
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
D AGE+P+A++VR+ S +TE ++++F+ K+V
Sbjct: 317 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 415
>gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779929, DNA
sequence
Length = 743
Score = 101 bits (216), Expect(3) = 5e-037
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = -2 / +3
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPF 511
GWLHTGD+G+ D+ ++F+VDRLKE+IKYKG Q+APAE+E LL++HP I DA V+ +
Sbjct: 42 GWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVVGY 212
Score = 53.3 bits (110), Expect(3) = 5e-037
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -2 / +3
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRREL 325
QV YYKK+R V F+D +PK+ SGKILR+EL
Sbjct: 570 QVIYYKKVREVIFIDKIPKAPSGKILRKEL 659
Score = 41.8 bits (85), Expect(3) = 5e-037
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -2 / +3
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAY 403
+ E GE+P+A+V ++ S L+E DV++F+ K+V +
Sbjct: 336 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIF 440
>gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 627
Score = 70.7 bits (148), Expect(3) = 6e-037
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -2 / -2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
+PD EAGEVPIAYVVRS +SSL EVDVQKFIEKQV
Sbjct: 467 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 363
Score = 70.3 bits (147), Expect(3) = 6e-037
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = -2 / -3
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*Q 292
QVA+YK+LR+V VDSVPKSA+GK LRRELI++VRSSKL*+
Sbjct: 175 QVAHYKRLRKVKSVDSVPKSAAGKTLRRELIAQVRSSKL*R 53
Score = 64.3 bits (134), Expect(3) = 7e-028
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +2 / +3
Query: 296 YSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YAT 412
YSLDDLT MSSLLK+FP ADFGTLST T L+ L* AT
Sbjct: 57 YSLDDLTWAMSSLLKVFPAADFGTLSTDFTFLSLL*CAT 173
Score = 62.0 bits (129), Expect(3) = 7e-028
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 410 TCFSINFWTSTSVKELSEDLTT*AIGTSPASASG 511
TCFS+NFWTSTS EL D TT AIGTSPAS SG
Sbjct: 364 TCFSMNFWTSTSASELFGDRTTYAIGTSPASGSG 465
Score = 55.1 bits (114), Expect(3) = 6e-037
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / -1
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDA VIP
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVIP 547
Score = 39.1 bits (79), Expect(3) = 7e-028
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDN+S++NF MRQK FKL R NL
Sbjct: 547 RDNSSVKNFRMRQKQSFKLSRSNL 618
>gb|CW311231.1|CW311231 104_800_11470125_116_35753_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470125, DNA
sequence
Length = 643
Score = 97.7 bits (207), Expect(3) = 8e-036
Identities = 43/54 (79%), Positives = 46/54 (85%)
Frame = +2 / +2
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSIN 427
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTLLNFL*YATC ++
Sbjct: 218 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCKGVH 379
Score = 97.3 bits (206), Expect(3) = 3e-036
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -2 / -2
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
QVAYYKKLRRVTFVDSVPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 366 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 220
Score = 91.3 bits (193), Expect(3) = 2e-033
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = -3 / -3
Query: 422 LKSRSHTTKN*GG*PLWTAYQNLLQGRS*EENSSLKSDHPSYSKPASV 279
L RSHTTKN*GG PLWTAYQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 374 LPYRSHTTKN*GGLPLWTAYQNLLQERF*EEN*SLKSDRPSYSKPASV 231
Score = 84.0 bits (177), Expect(2) = 2e-026
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1 / -1
Query: 412 GRILQKIEEGDLCGQRTKICFREDLEKRTHL*SQIIQAIASRLL 281
GRILQKIEEG LCGQRTKICFR+D EKRT *SQI+QAIA++LL
Sbjct: 364 GRILQKIEEGYLCGQRTKICFRKDFEKRTDR*SQIVQAIANQLL 233
Score = 80.8 bits (170), Expect(3) = 3e-032
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDL 414
TEA SDF D+FSSQ+L *SRFWYAVHKG+PPQFFVVCDL
Sbjct: 232 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPQFFVVCDL 366
Score = 78.0 bits (164), Expect(3) = 3e-032
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +2 / +2
Query: 395 FL*YATCFSINFWTSTSVKELSEDLTT*AIGTSPASASGN 514
FL TCFSINFWTSTSVKEL+ +LTT*AIGTSPASASGN
Sbjct: 521 FLHRLTCFSINFWTSTSVKELTGELTT*AIGTSPASASGN 640
Score = 74.4 bits (156), Expect(3) = 3e-036
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -2 / -2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
FPDAEAGEVPIAYVV S SSLTEVDVQKFIEKQV+ + L
Sbjct: 639 FPDAEAGEVPIAYVVSSPVSSLTEVDVQKFIEKQVSLCRNL 517
Score = 72.1 bits (151), Expect(3) = 8e-036
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = +1 / +1
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSIGE 513
LLFNKFLDINFSQRT RG YDV NRNF SFSIGE
Sbjct: 538 LLFNKFLDINFSQRTHRGTYDVGNRNFPSFSIGE 639
Score = 71.2 bits (149), Expect(3) = 2e-033
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -1
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAG 410
VPRC*SW SSYCLRRK EFFD*S*CPEIY*KAG
Sbjct: 640 VPRC*SWGSSYCLRRKFPCEFFD*S*CPEIY*KAG 536
Score = 70.7 bits (148), Expect(2) = 3e-023
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3 / +3
Query: 411 PAFQ*ISGHQLQSKNSQRTLRRKQ*ELHQLQHRGT 515
PAFQ*ISGHQLQSKNSQ LRR+Q*EL QLQHRGT
Sbjct: 537 PAFQ*ISGHQLQSKNSQGNLRRRQ*ELPQLQHRGT 641
Score = 60.6 bits (126), Expect(2) = 3e-023
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +3 / +3
Query: 279 HRSRLAIAWMI*XXXXXXXXXXXXKQILVRCPQRSPSSIFCSMRP 413
+RS AIAW I* KQILVRCPQR PSSIFCSMRP
Sbjct: 231 NRSWFAIAWTI*L*RSVLFSKSFLKQILVRCPQR*PSSIFCSMRP 365
Score = 57.9 bits (120), Expect(2) = 2e-026
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -3 / -3
Query: 512 SPMLKLVKFLLLTS*GPLRVL*LKLMSRNLLKSR 411
SPMLKL KFLL TS* PL VL*LKLMSRNLLKSR
Sbjct: 638 SPMLKLGKFLLPTS*VPL*VL*LKLMSRNLLKSR 537
Score = 22.6 bits (43), Expect(3) = 8e-036
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1 / +2
Query: 202 SSAQ*HVNLYAQSDKFSN 255
SS Q VNLYAQ F +
Sbjct: 2 SSVQQQVNLYAQLTNFQS 55
Score = 22.1 bits (42), Expect(3) = 3e-036
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 240 RLSVKVYMLLSGA 202
+LSVKVY+LL+ A
Sbjct: 40 QLSVKVYLLLNRA 2
Score = 21.7 bits (41), Expect(3) = 2e-033
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 238 IERKGLHVTERS 203
IERKGL V E+S
Sbjct: 38 IERKGLPVAEQS 3
Score = 21.7 bits (41), Expect(3) = 3e-032
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 201 KLRSVTCKPLRSI 239
KL S T KPLRSI
Sbjct: 1 KLCSATGKPLRSI 39
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 151 bits (324), Expect = 1e-035
Identities = 53/99 (53%), Positives = 80/99 (80%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
+ GWLHTGDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAE+E LL++HPEI DA V+
Sbjct: 384 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAEVEALLITHPEIRDAAVVSMK 563
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
D AGEVP+A++++S S ++E ++++F+ K+V +YK++
Sbjct: 564 DELAGEVPVAFIIQSEGSEISENEIKQFVAKEVVFYKRI 680
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 100 bits (213), Expect(2) = 2e-035
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = -2 / +3
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
GWLHTGD+G+ D+ ++F+VDRLKE+IKYKG Q+APAE+E LL++HP I DA V+
Sbjct: 270 GWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADASVV 434
Score = 69.8 bits (146), Expect(2) = 2e-035
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = -2 / +3
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKS 355
+ E GE+P+A+V ++ S L+E DV++F+ K+V YYKK+R V F+D +PK+
Sbjct: 447 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKA 599
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 148 bits (318), Expect = 8e-035
Identities = 59/103 (57%), Positives = 82/103 (79%)
Frame = -2 / +3
Query: 612 KELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDV 433
KELIK+KGFQ+ PAELE LL++HP I DA V+P D AGEVP+A+VVR+++S + E +
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 432 QKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSS 304
++F+ KQV +YK+L +V F S+PKSASGKILRREL +K+ ++
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRRELRAKLAAA 311
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 147 bits (315), Expect = 2e-034
Identities = 55/103 (53%), Positives = 83/103 (80%)
Frame = -2 / +2
Query: 621 DRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTE 442
DRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+ D AGE+P+A++VR+ S +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 441 VDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
++++F+ K+V +YKK+ +V F +S+PK+ SGKILR++L +++
Sbjct: 182 GEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 310
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 147 bits (315), Expect = 2e-034
Identities = 55/103 (53%), Positives = 83/103 (80%)
Frame = -2 / +2
Query: 621 DRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTE 442
DRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+ D AGE+P+A++VR+ S +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 441 VDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
++++F+ K+V +YKK+ +V F +S+PK+ SGKILR++L +++
Sbjct: 182 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 310
>gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284g08, DNA
sequence
Length = 724
Score = 91.3 bits (193), Expect(3) = 2e-032
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = -2 / -2
Query: 666 GDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
GDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 723 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 574
Score = 47.8 bits (98), Expect(3) = 2e-032
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = -2 / -2
Query: 411 VAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
V +YK++ RV F DS+PK+ SGKILR++L +++
Sbjct: 135 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARL 37
Score = 42.3 bits (86), Expect(3) = 2e-032
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = -2 / -1
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
D AGEVP+A+++RS S ++E ++++F+ K+V
Sbjct: 460 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEV 362
>gb|CW053186.1|CW053186 104_293_10515824_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515824, DNA
sequence
Length = 604
Score = 92.3 bits (195), Expect(3) = 8e-030
Identities = 41/54 (75%), Positives = 45/54 (83%)
Frame = +2 / +3
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSIN 427
SS QK CYSLDDLTL +SSLLKIFPEADFGTLSTKVTL +FL*YATC ++
Sbjct: 396 SSLTKQKLVCYSLDDLTLAISSLLKIFPEADFGTLSTKVTLPHFL*YATCKGVH 557
Score = 90.4 bits (191), Expect(3) = 9e-031
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = -2 / -1
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*QAGFCVQKL 268
QVAYYKK RVTFVDSVPKSASGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 544 QVAYYKK*GRVTFVDSVPKSASGKILRRELIAKVRSSKL*QTSFCFVRL 398
Score = 89.0 bits (188), Expect(3) = 1e-026
Identities = 40/48 (83%), Positives = 40/48 (83%)
Frame = -3 / -2
Query: 422 LKSRSHTTKN*GG*PLWTAYQNLLQGRS*EENSSLKSDHPSYSKPASV 279
L RSHTTKN GG PLWTAYQNLLQ R *EEN SLKSD PSYSKPASV
Sbjct: 552 LPYRSHTTKNEGGLPLWTAYQNLLQERF*EEN*SLKSDRPSYSKPASV 409
Score = 80.3 bits (169), Expect(3) = 2e-022
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = -1 / -3
Query: 412 GRILQKIEEGDLCGQRTKICFREDLEKRTHL*SQIIQAIASRLL 281
GRILQK+ EG LCGQRTKICFR+D EKRT *SQI+QAIA++LL
Sbjct: 542 GRILQKMREGYLCGQRTKICFRKDFEKRTDR*SQIVQAIANQLL 411
Score = 78.5 bits (165), Expect(3) = 2e-023
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = +1 / +2
Query: 280 TEAXXXXXXXSDFRDEFSSQDLP*SRFWYAVHKGHPPQFFVVCDL 414
TEA SDF D+FSSQ+L *SRFWYAVHKG+PP FFVVCDL
Sbjct: 410 TEAGLL*LGRSDFSDQFSSQNLS*SRFWYAVHKGNPPSFFVVCDL 544
Score = 44.6 bits (91), Expect(3) = 8e-030
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3 / +2
Query: 153 MYTCPTNCVKLNVLLDKLRSVTCKPLRSI 239
+YT CVKLNVLLDKL S T KPLRSI
Sbjct: 131 IYTRNV*CVKLNVLLDKLCSATGKPLRSI 217
Score = 43.2 bits (88), Expect(3) = 9e-031
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / -2
Query: 238 IERKGLHVTERSLSSNTFSLTQFVGHVYMVV 146
IERKGL V E+SLSS TFSLT VY+++
Sbjct: 216 IERKGLPVAEQSLSSKTFSLTHQTLRVYIII 124
Score = 41.4 bits (84), Expect(3) = 9e-031
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / -3
Query: 159 YTWWCRMTCIEYWA*FTFT 103
+TW C +TCIEYW *FT+T
Sbjct: 80 HTWQCCVTCIEYWV*FTYT 24
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1 / +3
Query: 175 VSS*MYCLISSAQ*HVNLYAQSDKFSN 255
VS+*M+CLISS Q VNLYAQ F +
Sbjct: 153 VSN*MFCLISSVQQQVNLYAQLTNFQS 233
Score = 37.7 bits (76), Expect(3) = 1e-026
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 240 RLSVKVYMLLSGAYQAIHSA*H 175
+LSVKVY+LL+ AYQA HS *H
Sbjct: 218 QLSVKVYLLLNRAYQAKHSV*H 153
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 239 D*A*RFTCY*AELIKQYIQLDT 174
+*A*RFTC * ELIKQ IQ DT
Sbjct: 217 N*A*RFTCC*TELIKQNIQFDT 152
Score = 35.0 bits (70), Expect(3) = 8e-030
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 101 IVNVNQAQYSIQVIRHHHVYM 163
+V VNQ QYSIQV +H HV++
Sbjct: 22 VVYVNQTQYSIQVTQHCHVWL 84
Score = 34.5 bits (69), Expect(3) = 1e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 157 YMVVSDDLYRILGLIYIHY 101
YM V LYRILGLIYIH+
Sbjct: 78 YMAVLCHLYRILGLIYIHH 22
Score = 33.1 bits (66), Expect(3) = 2e-023
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 109 CKSGPIFDTSHPTPPCI 159
CKS PIFDTS T PC+
Sbjct: 30 CKSDPIFDTSDTTLPCM 80
Score = 30.9 bits (61), Expect(3) = 2e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 158 IHGGVG*LVSNIGPDLHS 105
IHG V LVSNIG DLH+
Sbjct: 79 IHGSVVSLVSNIGSDLHT 26
>gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 759
Score = 107 bits (228), Expect(2) = 3e-029
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -2 / -3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
+ GWLHTGDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 526 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 356
Score = 42.3 bits (86), Expect(2) = 3e-029
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = -2 / -2
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
D AGEVP+A+++RS S ++E ++++F+ K+V
Sbjct: 242 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEV 144
>gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 694
Score = 107 bits (228), Expect(2) = 3e-029
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
+ GWLHTGDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 153 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 323
Score = 42.3 bits (86), Expect(2) = 3e-029
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
D AGEVP+A+++RS S ++E ++++F+ K+V
Sbjct: 437 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEV 535
>gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117099, DNA
sequence
Length = 664
Score = 107 bits (228), Expect(2) = 4e-029
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -2 / -1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVI 517
+ GWLHTGDIGY D+ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 502 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 332
Score = 41.8 bits (85), Expect(2) = 4e-029
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = -2 / -1
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
D AGE+P+A++VR+ S +TE ++++F+ K+V
Sbjct: 226 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 128
>gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139064, DNA
sequence
Length = 696
Score = 67.5 bits (141), Expect(3) = 5e-029
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2 / -1
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
+GWL TGD+ Y D+ G LFVVDRLKELIKYKG+Q+
Sbjct: 537 EGWLRTGDLCYIDQDGFLFVVDRLKELIKYKGYQV 433
Score = 61.6 bits (128), Expect(3) = 5e-029
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -2 / -2
Query: 522 VIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDS 367
V +P EAG++P+A VVR S +TE V + K+VA YKK+R+V FVDS
Sbjct: 158 VYRYPHEEAGQIPVALVVRQPGSKVTEAQVIDHVAKRVAPYKKIRKVLFVDS 3
Score = 37.7 bits (76), Expect(3) = 5e-029
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2 / -2
Query: 597 YKGFQIAPAELEGLLLSHPEILDAVVIP 514
Y Q+ PAELE +L S PE++DA V+P
Sbjct: 335 YLSLQVPPAELELVLQSLPEVIDAAVMP 252
>gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188585, DNA
sequence
Length = 625
Score = 81.3 bits (171), Expect(2) = 3e-027
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = -2 / +3
Query: 510 PDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRR 331
PD EAGEVP + VVR + +E D+ ++ ++VA YKKLR + FVD++PKS SGKILRR
Sbjct: 183 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 362
Query: 330 EL 325
+L
Sbjct: 363 QL 368
Score = 62.0 bits (129), Expect(2) = 3e-027
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2 / +1
Query: 615 LKELIKYKGFQIAPAELEGLLLSHPEILDAVV 520
+KELIKYKGFQ+APAELE +LLSHP + DA V
Sbjct: 1 IKELIKYKGFQVAPAELEAILLSHPSVEDAAV 96
>gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 632
Score = 101 bits (216), Expect(2) = 7e-027
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = -2 / +3
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPF 511
GWLHTGD+G+ D+ ++F+VDRLKE+IKYKG Q+APAE+E LL++HP I DA V+ +
Sbjct: 63 GWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVVGY 233
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -2 / +3
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAY 403
+ E GE+P+A+V ++ S L+E DV++F+ K+V +
Sbjct: 357 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIF 461
>gb|CW228589.1|CW228589 104_668_11206459_148_37252_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206459, DNA
sequence
Length = 682
Score = 74.8 bits (157), Expect(2) = 1e-026
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = -2 / +2
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*Q 292
QVA+YK+LR+VTFV SVPKSA+GKILRRELI++VR SKL*Q
Sbjct: 335 QVAHYKRLRKVTFVGSVPKSAAGKILRRELIAQVRLSKL*Q 457
Score = 71.6 bits (150), Expect(2) = 8e-025
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +2 / -2
Query: 293 CYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSI 424
CYSLD LT MSSLLKIFP ADFGTL T VT L+ L* ATC +I
Sbjct: 456 CYSLDSLTWAMSSLLKIFPAADFGTLPTNVTFLSLL*CATCRAI 325
Score = 68.4 bits (143), Expect(2) = 1e-026
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = -2 / +3
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKK 394
+PDAEAGEVPIAYVV S +SSL E DVQKFIEKQV +K
Sbjct: 54 YPDAEAGEVPIAYVVLSPKSSLAEADVQKFIEKQVKVGQK 173
Score = 65.2 bits (136), Expect(2) = 8e-025
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +2 / -1
Query: 410 TCFSINFWTSTSVKELSEDLTT*AIGTSPASASG 511
TCFSINFWTS S EL D TT*AIGTSPASASG
Sbjct: 157 TCFSINFWTSASASELFGDSTT*AIGTSPASASG 56
>gb|CW252367.1|CW252367 104_715_11224460_116_35097_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224460, DNA
sequence
Length = 612
Score = 79.9 bits (168), Expect(3) = 2e-026
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2 / +1
Query: 395 FL*YATCFSINFWTSTSVKELSEDLTT*AIGTSPASASGN 514
FL TCFSINFWTSTSVKEL+ DLTT*AIGTSPASASGN
Sbjct: 181 FLHRLTCFSINFWTSTSVKELTGDLTT*AIGTSPASASGN 300
Score = 77.1 bits (162), Expect(2) = 1e-024
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / -2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
FPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQV+ + L
Sbjct: 299 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 177
Score = 75.8 bits (159), Expect(3) = 3e-024
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1 / +3
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSIGE 513
LLFNKFLDINFSQRT RGPYDV NRNF SFSIGE
Sbjct: 198 LLFNKFLDINFSQRTHRGPYDVGNRNFPSFSIGE 299
Score = 73.5 bits (154), Expect(3) = 1e-023
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / -1
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAG 410
VPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAG
Sbjct: 300 VPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAG 196
Score = 57.4 bits (119), Expect(3) = 2e-026
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1 / +2
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDNNSIQNFWMRQK*PFKL CNL
Sbjct: 407 RDNNSIQNFWMRQK*PFKLSGCNL 478
Score = 57.0 bits (118), Expect(2) = 1e-024
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / -3
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDAVVIP
Sbjct: 481 WQIAPAELEGLLLSHPEILDAVVIP 407
Score = 55.6 bits (115), Expect(3) = 1e-023
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / -2
Query: 586 SDCTCRA*RATSVSSRNSGCCCYPV 512
+DCT A*RATSVSSRNSGCCCYPV
Sbjct: 479 ADCTR*A*RATSVSSRNSGCCCYPV 405
Score = 52.8 bits (109), Expect(3) = 3e-024
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3 / +1
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQHPEFLDETEVALQA++VQS
Sbjct: 406 TG*QQHPEFLDETEVALQAQRVQS 477
Score = 24.4 bits (47), Expect(3) = 3e-024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 389 LNFL*YATCFSIN 427
LNFL*YATC ++
Sbjct: 1 LNFL*YATCKGVH 39
Score = 23.1 bits (44), Expect(3) = 2e-026
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 390 SIFCSMRP 413
SIFCSMRP
Sbjct: 2 SIFCSMRP 25
Score = 21.7 bits (41), Expect(3) = 1e-023
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 414 QVAYYKKL 391
QVAYYKKL
Sbjct: 26 QVAYYKKL 3
>gb|CW228588.1|CW228588 104_668_11206459_116_37251_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206459, DNA
sequence
Length = 663
Score = 74.8 bits (157), Expect(2) = 1e-025
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = -2 / -3
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSKL*Q 292
QVA+YK+LR+VTFV SVPKSA+GKILRRELI++VR SKL*Q
Sbjct: 376 QVAHYKRLRKVTFVGSVPKSAAGKILRRELIAQVRLSKL*Q 254
Score = 71.6 bits (150), Expect(2) = 9e-024
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +2 / +3
Query: 293 CYSLDDLTLEMSSLLKIFPEADFGTLSTKVTLLNFL*YATCFSI 424
CYSLD LT MSSLLKIFP ADFGTL T VT L+ L* ATC +I
Sbjct: 255 CYSLDSLTWAMSSLLKIFPAADFGTLPTNVTFLSLL*CATCRAI 386
Score = 64.8 bits (135), Expect(2) = 1e-025
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -2 / -1
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKK 394
+PDAEA EVPIAYVV S +SSL E DVQKFIEKQV +K
Sbjct: 657 YPDAEAEEVPIAYVVLSPKSSLAEADVQKFIEKQVKVGQK 538
Score = 61.6 bits (128), Expect(2) = 9e-024
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 410 TCFSINFWTSTSVKELSEDLTT*AIGTSPASASG 511
TCFSINFWTS S EL D TT*AIGTS ASASG
Sbjct: 554 TCFSINFWTSASASELFGDSTT*AIGTSSASASG 655
>gb|CW194264.1|CW194264 104_617_11180005_116_36787_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180005, DNA
sequence
Length = 688
Score = 79.9 bits (168), Expect(2) = 2e-025
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2 / -1
Query: 395 FL*YATCFSINFWTSTSVKELSEDLTT*AIGTSPASASGN 514
FL TCFSINFWTSTSVKEL+ DLTT*AIGTSPASASGN
Sbjct: 598 FLHRLTCFSINFWTSTSVKELTGDLTT*AIGTSPASASGN 479
Score = 77.1 bits (162), Expect(2) = 1e-024
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / +3
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKL 391
FPDAEAGEVPIAYVVRS SSLTEVDVQKFIEKQV+ + L
Sbjct: 480 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 602
Score = 75.8 bits (159), Expect(2) = 6e-023
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1 / -3
Query: 412 LLFNKFLDINFSQRTLRGPYDVSNRNFTSFSIGE 513
LLFNKFLDINFSQRT RGPYDV NRNF SFSIGE
Sbjct: 581 LLFNKFLDINFSQRTHRGPYDVGNRNFPSFSIGE 480
Score = 73.5 bits (154), Expect(2) = 4e-023
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / +2
Query: 514 VPRC*SW*SSYCLRRKVL*EFFD*S*CPEIY*KAG 410
VPRC*SW SSYCLRRKV EFFD*S*CPEIY*KAG
Sbjct: 479 VPRC*SWGSSYCLRRKVPCEFFD*S*CPEIY*KAG 583
Score = 57.4 bits (119), Expect(2) = 2e-025
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 514 RDNNSIQNFWMRQK*PFKLGRCNL 585
RDNNSIQNFWMRQK*PFKL CNL
Sbjct: 372 RDNNSIQNFWMRQK*PFKLSGCNL 301
Score = 57.0 bits (118), Expect(2) = 1e-024
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +1
Query: 588 FQIAPAELEGLLLSHPEILDAVVIP 514
+QIAPAELEGLLLSHPEILDAVVIP
Sbjct: 298 WQIAPAELEGLLLSHPEILDAVVIP 372
Score = 55.6 bits (115), Expect(2) = 4e-023
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 586 SDCTCRA*RATSVSSRNSGCCCYPV 512
+DCT A*RATSVSSRNSGCCCYPV
Sbjct: 300 ADCTR*A*RATSVSSRNSGCCCYPV 374
Score = 52.8 bits (109), Expect(2) = 6e-023
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3 / -1
Query: 513 TG*QQHPEFLDETEVALQARQVQS 584
TG*QQHPEFLDETEVALQA++VQS
Sbjct: 373 TG*QQHPEFLDETEVALQAQRVQS 302
>gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 748
Score = 112 bits (239), Expect(2) = 3e-025
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -2 / -1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIP 514
++GWLHTGDIGY D+ ++F+VDRLKELIKYKGFQ+APAELE +L++HP I DA V+P
Sbjct: 352 DEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVP 179
Score = 24.0 bits (46), Expect(2) = 3e-025
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 507 DAEAGEVPIAYVVRS 463
D GE+P+A+VV S
Sbjct: 62 DDSCGEIPVAFVVTS 18
>gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht61f07 5', DNA sequence
Length = 714
Score = 67.0 bits (140), Expect(3) = 6e-025
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = -2 / +3
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
+GWL TGD+ YF+E G L++VDRLKELIKYKG+Q+
Sbjct: 42 EGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQV 146
Score = 43.2 bits (88), Expect(3) = 6e-025
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
+PD + G++P+A++VR S+LT+ V F+ KQV
Sbjct: 427 YPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQV 531
Score = 42.8 bits (87), Expect(3) = 6e-025
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -2 / +1
Query: 606 LIKYKGFQIAPAELEGLLLSHPEILDAVVIP 514
++ Y Q+ PAELE +L SHP+I+DA VIP
Sbjct: 223 VLTYILLQVPPAELEHILNSHPDIMDAAVIP 315
>gb|CD423108.1|CD423108 SA1_27_B10.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_27_B10_A002 3', mRNA sequence
Length = 661
Score = 49.6 bits (102), Expect(4) = 1e-023
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2 / -2
Query: 266 SSF*TQKPACYSLDDLTLEMSSLLKIFPE 352
SS QK CYSLDDLTL +SSLLKIFPE
Sbjct: 87 SSLTKQKLVCYSLDDLTLAISSLLKIFPE 1
Score = 49.6 bits (102), Expect(4) = 2e-024
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 351 SGKILRRELISKVRSSKL*QAGFCVQKL 268
SGKILRRELI+KVRSSKL*Q FC +L
Sbjct: 2 SGKILRRELIAKVRSSKL*QTSFCFVRL 85
Score = 44.6 bits (91), Expect(4) = 1e-023
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3 / -1
Query: 153 MYTCPTNCVKLNVLLDKLRSVTCKPLRSI 239
+YT CVKLNVLLDKL S T KPLRSI
Sbjct: 352 IYTRNV*CVKLNVLLDKLCSATGKPLRSI 266
Score = 43.2 bits (88), Expect(4) = 2e-024
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +3
Query: 238 IERKGLHVTERSLSSNTFSLTQFVGHVYMVV 146
IERKGL V E+SLSS TFSLT VY+++
Sbjct: 267 IERKGLPVAEQSLSSKTFSLTHQTLRVYIII 359
Score = 41.4 bits (84), Expect(4) = 2e-024
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 159 YTWWCRMTCIEYWA*FTFT 103
+TW C +TCIEYW *FT+T
Sbjct: 403 HTWQCCVTCIEYWV*FTYT 459
Score = 39.1 bits (79), Expect(4) = 1e-023
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 1 MRWLHKLSDNISSYNCL 51
+RWLHKL DNIS YNCL
Sbjct: 556 VRWLHKLPDNIS*YNCL 506
Score = 36.8 bits (74), Expect(4) = 2e-024
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / +3
Query: 53 YRQLYEEILSDSLCNQR 3
YRQLY+EILS SLC+QR
Sbjct: 504 YRQLYQEILSGSLCSQR 554
Score = 35.0 bits (70), Expect(4) = 1e-023
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 101 IVNVNQAQYSIQVIRHHHVYM 163
+V VNQ QYSIQV +H HV++
Sbjct: 461 VVYVNQTQYSIQVTQHCHVWL 399
>gb|BZ694054.1|BZ694054 SP__Ba0042B06.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0042B06 3', DNA sequence
Length = 942
Score = 92.3 bits (195), Expect(2) = 2e-024
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = -2 / +3
Query: 690 IEQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
I+QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQ+
Sbjct: 282 IKQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQV 392
Score = 78.5 bits (165), Expect(2) = 1e-020
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +1 / -2
Query: 583 LKTFVLNQFFKSINYEKLTSLIKVSNITSMQPPLLD 690
LKTFVL+QFFKSINY+KLTS IKVSNITSMQPPLLD
Sbjct: 389 LKTFVLDQFFKSINYKKLTSFIKVSNITSMQPPLLD 282
Score = 45.1 bits (92), Expect(2) = 1e-020
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +1 / -2
Query: 517 DNNSIQNFWMRQK*PFKLGRCNL 585
D NSIQNFWMRQK*P KL C L
Sbjct: 914 DTNSIQNFWMRQK*PSKLSGCYL 846
Score = 43.7 bits (89), Expect(2) = 2e-024
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3 / +1
Query: 584 RLHLPSLKGYFCLIQKFWMLLLS 516
R H S +GYFCLIQKFWMLL+S
Sbjct: 847 R*HPLSFEGYFCLIQKFWMLLVS 915
>gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591543, DNA
sequence
Length = 740
Score = 112 bits (239), Expect = 6e-024
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIP 514
++GWLHTGDIGY D+ ++F+VDRLKELIKYKGFQ+APAELE +L++HP I DA V+P
Sbjct: 462 DEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVP 635
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 861,373,569
Number of Sequences: 832831
Number of extensions: 11151715
Number of successful extensions: 76942
Number of sequences better than 1.0e-020: 60
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21742903806
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)