TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071761.2.1
(638 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 240 6e-077
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 256 1e-072
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 246 3e-071
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 248 4e-065
gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorgh... 94 8e-057
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 200 2e-050
gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation... 91 2e-050
gb|CW194291.1|CW194291 104_617_11180020_116_36786_008 Sorgh... 96 1e-045
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 127 2e-045
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 177 1e-043
gb|CW353056.1|CW353056 fsbb001f015k03f0 Sorghum methylation... 96 7e-041
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 165 8e-040
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 102 4e-038
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 102 4e-038
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 102 4e-038
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 157 1e-037
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 149 3e-035
gb|CN143608.1|CN143608 WOUND1_17_G06.b1_A002 Wounded leaves... 149 5e-035
gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorgh... 91 5e-035
gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum m... 91 5e-035
gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorgh... 77 6e-035
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 146 2e-034
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 146 3e-034
gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorgh... 91 1e-032
gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorgh... 91 1e-032
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 138 1e-031
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 81 3e-031
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 92 2e-029
gb|CW331180.1|CW331180 104_828_11480770_116_36026_041 Sorgh... 80 7e-029
gb|CW361238.1|CW361238 fsbb001f029k23k0 Sorghum methylation... 127 2e-028
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 74 8e-027
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 74 8e-027
gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorgh... 77 1e-025
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 68 2e-023
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 84 4e-023
gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves... 105 9e-022
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 240 bits (518), Expect(4) = 3e-075
Identities = 105/114 (92%), Positives = 106/114 (92%)
Frame = +2 / +2
Query: 11 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTE 190
DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSM DDLAGEIPVAFIVRTEGS+VTE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 191 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*GPYAA 352
DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLA PY A
Sbjct: 182 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAXRCSLRPYTA 343
Score = 231 bits (499), Expect(5) = 6e-077
Identities = 105/115 (91%), Positives = 106/115 (92%)
Frame = -3 / -1
Query: 354 EAAYGPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*E 175
+A YG ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT E
Sbjct: 345 KAVYGLSEHRXASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVTSE 166
Query: 174 PSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLS 10
PSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTW PLYLMISLSLS
Sbjct: 165 PSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLS 1
Score = 182 bits (392), Expect(4) = 2e-055
Identities = 80/115 (69%), Positives = 83/115 (72%)
Frame = +1 / +1
Query: 10 RQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRINER*PCW*NPGRLHRADRRFSSHR 189
RQAQGDHQVQG+ DQGRRRR+NE * CW*NPGRLHRADRR SHR
Sbjct: 1 RQAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRVNEG*SCW*NPGRLHRADRRL*SHR 180
Query: 190 G*DQAIRRQGGGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSLRPVCSF 354
G*DQAI RQGGGFLQEDPQG LH IHPQEPV QDP+EGLESQAR V SF
Sbjct: 181 G*DQAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARXPVFTEAVYSF 345
Score = 131 bits (280), Expect(4) = 3e-044
Identities = 56/85 (65%), Positives = 61/85 (71%)
Frame = -2 / -3
Query: 355 RSCIRASVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENHXXXXXXXXXXXXXLR 176
+SCIR GEPGSQVLP DLA RVLGDGF EE+LVDLLVENH R
Sbjct: 346 KSCIRPQ*TPAGEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLILGDFR 167
Query: 175 TFGPHDEGDRDFTSKVIVH*YDGGV 101
FGPHDEGDRDFTSK+I+H*+DGGV
Sbjct: 166 AFGPHDEGDRDFTSKIILH*HDGGV 92
Score = 111 bits (237), Expect(4) = 3e-032
Identities = 48/77 (62%), Positives = 55/77 (71%)
Frame = -1 / -2
Query: 356 KKLHTGLSEHRRRAWLXXXXXXXXXXXXXXWIR*RRPCGSSCRKPPPWRRIA*SHPR*LE 177
+KL+T RAWL WI+*R+PCGSSCRKPPPWR+IA*SHPR*L+
Sbjct: 347 EKLYTASVNTGXRAWLSSPSLGSCRTGSWGWIQ*RKPCGSSCRKPPPWRQIA*SHPR*LQ 168
Query: 176 NLRSAR*RRPGFHQQGH 126
+LRSAR*RRPGFHQQ H
Sbjct: 167 SLRSAR*RRPGFHQQDH 117
Score = 59.3 bits (123), Expect(5) = 6e-077
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -1
Query: 602 NTVLRSCIAVIRLVLWVKNNIETTSISFMNITHRANKQTN 483
N VLR+CIAVI LVLWVKNNI+T+ ++ H N+QTN
Sbjct: 585 NMVLRNCIAVISLVLWVKNNIDTSIYIYIVYEHYTNRQTN 466
Score = 57.9 bits (120), Expect(4) = 3e-044
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = -3 / -3
Query: 606 VKHGTP*LYCRNQACSLGQKQHRDDVYIVYEHYTQGQQTDK 484
+KHGTP*LYCR+Q CSLGQKQ+R +Y T +QT+K
Sbjct: 589 LKHGTP*LYCRHQPCSLGQKQYRYIYIYIYRL*TLHKQTNK 467
Score = 47.3 bits (97), Expect(4) = 3e-075
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +3 / +1
Query: 531 RRLYVVFDPKNKPDYGNTATEYRVS 605
R +Y+VFDPKNK D GNT TEY VS
Sbjct: 514 RCIYIVFDPKNKADDGNTVTEYHVS 588
Score = 44.1 bits (90), Expect(4) = 2e-055
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1 / +2
Query: 535 VSMLFLTQRTSLITAIQLRSTVF 603
VS+LFLTQRT L+TAIQLRST+F
Sbjct: 518 VSILFLTQRTRLMTAIQLRSTMF 586
Score = 34.1 bits (68), Expect(4) = 3e-032
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 604 ETRYSVAVLP*SGLFFGSK 548
ET YSV VLP S LFFGSK
Sbjct: 587 ETWYSVTVLPSSALFFGSK 531
Score = 28.6 bits (56), Expect(5) = 6e-077
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 457 FHRNTCPFCCQFMNS 413
FHR T FCC FMN+
Sbjct: 438 FHRITRLFCCPFMNN 394
Score = 27.6 bits (54), Expect(4) = 3e-075
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 496 LALCVMFINDIDVVSMLFL 552
L++CVMFINDI + +++
Sbjct: 472 LSVCVMFINDIYIYRCIYI 528
Score = 27.2 bits (53), Expect(4) = 3e-032
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 531 VYIVYEHYTQGQ 496
+YIVYEHYT Q
Sbjct: 507 IYIVYEHYTNRQ 472
Score = 26.7 bits (52), Expect(4) = 3e-044
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 455 PQEYVSLLLPVHE* 414
PQ+Y LLLP HE*
Sbjct: 436 PQDYAPLLLPFHE* 395
Score = 25.8 bits (50), Expect(4) = 3e-075
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 412 YYS*TGNRRDTYSCGTHVARK 474
+YS* GNRR SCG + ++
Sbjct: 393 HYS*KGNRRGA*SCGNMLPKE 455
Score = 24.0 bits (46), Expect(4) = 2e-055
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 416 IHELATEGTRIPVEHMLPER 475
IHE ATE R PVE +R
Sbjct: 397 IHERATEEARNPVETCCQKR 456
Score = 23.5 bits (45), Expect(4) = 2e-055
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 504 VCNVHKRY 527
+CNVHKRY
Sbjct: 480 LCNVHKRY 503
Score = 23.1 bits (44), Expect(5) = 6e-077
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 386 FFAAAWWPSEK 354
FF +A WPSEK
Sbjct: 374 FFFSAVWPSEK 342
Score = 22.1 bits (42), Expect(5) = 6e-077
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 413 *CYRHYIAFF 384
*CYR+ IAFF
Sbjct: 397 *CYRYCIAFF 368
Score = 22.1 bits (42), Expect(4) = 3e-032
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 456 STGIRVPSVASS*IVV 409
STG+R SVA S*I++
Sbjct: 437 STGLRASSVALS*IML 390
Score = 21.7 bits (41), Expect(4) = 3e-044
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 38 CT**SP*AC 12
CT**SP*AC
Sbjct: 29 CT**SP*AC 3
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 256 bits (553), Expect(3) = 2e-071
Identities = 111/113 (98%), Positives = 112/113 (99%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSM DDLAGEIPVAFIVRTEGS+
Sbjct: 150 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSE 329
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 340
VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G
Sbjct: 330 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 488
Score = 248 bits (537), Expect(5) = 1e-072
Identities = 112/120 (93%), Positives = 114/120 (95%)
Frame = -3 / -3
Query: 360 REEAAYGPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT 181
R ++ PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT
Sbjct: 508 RLKSCIRPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT 329
Query: 180 *EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTW PLYLMISLSLSTMK
Sbjct: 328 SEPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMK 149
Score = 208 bits (449), Expect(3) = 2e-055
Identities = 88/118 (74%), Positives = 92/118 (77%)
Frame = +1 / +2
Query: 1 LHRRQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRINER*PCW*NPGRLHRADRRFS 180
LHRRQAQGDHQVQG+ DQGRRRR+NE * CW*NPGRLHRADRR
Sbjct: 149 LHRRQAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRVNEG*SCW*NPGRLHRADRRL* 328
Query: 181 SHRG*DQAIRRQGGGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSLRPVCSF 354
SHRG*DQAI RQGGGFLQEDPQG LH IHPQEPV QDP+EGLESQARRRCSLRP +F
Sbjct: 329 SHRG*DQAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARRRCSLRPYTAF 502
Score = 137 bits (294), Expect(3) = 3e-036
Identities = 59/87 (67%), Positives = 63/87 (72%)
Frame = -2 / -2
Query: 361 PRRSCIRASVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENHXXXXXXXXXXXXX 182
P ASVNTGGEPGSQVLP DLA RVLGDGF EE+LVDLLVENH
Sbjct: 509 PSEKLYTASVNTGGEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLILGD 330
Query: 181 LRTFGPHDEGDRDFTSKVIVH*YDGGV 101
R FGPHDEGDRDFTSK+I+H*+DGGV
Sbjct: 329 FRAFGPHDEGDRDFTSKIILH*HDGGV 249
Score = 124 bits (266), Expect(2) = 2e-028
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = -1 / -1
Query: 341 GLSEHRRRAWLXXXXXXXXXXXXXXWIR*RRPCGSSCRKPPPWRRIA*SHPR*LENLRSA 162
GLSEHRRRAWL WI+*R+PCGSSCRKPPPWR+IA*SHPR*L++LRSA
Sbjct: 489 GLSEHRRRAWLSSPSLGSCRTGSWGWIQ*RKPCGSSCRKPPPWRQIA*SHPR*LQSLRSA 310
Query: 161 R*RRPGFHQQGH 126
R*RRPGFHQQ H
Sbjct: 309 R*RRPGFHQQDH 274
Score = 28.6 bits (56), Expect(5) = 1e-072
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 457 FHRNTCPFCCQFMNS 413
FHR T FCC FMN+
Sbjct: 594 FHRITRLFCCPFMNN 550
Score = 27.6 bits (54), Expect(3) = 2e-071
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 496 LALCVMFINDIDVVSMLFL 552
L++CVMFINDI + +++
Sbjct: 628 LSVCVMFINDIYIYRCIYM 684
Score = 27.2 bits (53), Expect(5) = 1e-072
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 531 VYIVYEHYTQGQ 496
+YIVYEHYT Q
Sbjct: 663 IYIVYEHYTNRQ 628
Score = 26.7 bits (52), Expect(3) = 3e-036
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 38 CT**SP*ACRR* 3
CT**SP*ACRR*
Sbjct: 186 CT**SP*ACRR* 151
Score = 26.7 bits (52), Expect(3) = 3e-036
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 455 PQEYVSLLLPVHE* 414
PQ+Y LLLP HE*
Sbjct: 592 PQDYAPLLLPFHE* 551
Score = 25.8 bits (50), Expect(3) = 2e-071
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 412 YYS*TGNRRDTYSCGTHVARK 474
+YS* GNRR SCG + ++
Sbjct: 549 HYS*KGNRRGA*SCGNMLPKE 611
Score = 24.0 bits (46), Expect(3) = 2e-055
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 416 IHELATEGTRIPVEHMLPER 475
IHE ATE R PVE +R
Sbjct: 553 IHERATEEARNPVETCCQKR 612
Score = 23.5 bits (45), Expect(3) = 2e-055
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 504 VCNVHKRY 527
+CNVHKRY
Sbjct: 636 LCNVHKRY 659
Score = 23.1 bits (44), Expect(5) = 1e-072
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 386 FFAAAWWPSEK 354
FF +A WPSEK
Sbjct: 530 FFFSAVWPSEK 498
Score = 22.1 bits (42), Expect(5) = 1e-072
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 413 *CYRHYIAFF 384
*CYR+ IAFF
Sbjct: 553 *CYRYCIAFF 524
Score = 22.1 bits (42), Expect(2) = 2e-028
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 456 STGIRVPSVASS*IVV 409
STG+R SVA S*I++
Sbjct: 593 STGLRASSVALS*IML 546
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 246 bits (532), Expect(5) = 3e-071
Identities = 107/110 (97%), Positives = 108/110 (98%)
Frame = +2 / +2
Query: 11 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTE 190
DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSM DDLAGEIPVAFIVRTEGS+VTE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 191 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 340
EIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G
Sbjct: 182 GEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 331
Score = 239 bits (517), Expect(4) = 7e-071
Identities = 108/117 (92%), Positives = 110/117 (94%)
Frame = -3 / -2
Query: 360 REEAAYGPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT 181
R ++ PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLIS SVT
Sbjct: 351 RLKSCIRPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISPSVT 172
Query: 180 *EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLS 10
EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTW PLYLMISLSLS
Sbjct: 171 SEPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLS 1
Score = 197 bits (424), Expect(4) = 4e-055
Identities = 84/115 (73%), Positives = 88/115 (76%)
Frame = +1 / +1
Query: 10 RQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRINER*PCW*NPGRLHRADRRFSSHR 189
RQAQGDHQVQG+ DQGRRRR+NE * CW*N GRLHRADRR SHR
Sbjct: 1 RQAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRVNEG*SCW*NSGRLHRADRRL*SHR 180
Query: 190 G*DQAIRRQGGGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSLRPVCSF 354
G*DQAI RQGGGFLQEDPQG LH IHPQEPV QDP+EGLESQARRRCSLRP +F
Sbjct: 181 G*DQAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARRRCSLRPYTAF 345
Score = 135 bits (290), Expect(5) = 2e-039
Identities = 58/87 (66%), Positives = 63/87 (72%)
Frame = -2 / -1
Query: 361 PRRSCIRASVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENHXXXXXXXXXXXXX 182
P ASVNTGGEPGSQVLP DLA RVLGDGF EE+LVDLLVENH
Sbjct: 352 PSEKLYTASVNTGGEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLTLGD 173
Query: 181 LRTFGPHDEGDRDFTSKVIVH*YDGGV 101
R FGPHDEGDR+FTSK+I+H*+DGGV
Sbjct: 172 FRAFGPHDEGDRNFTSKIILH*HDGGV 92
Score = 121 bits (258), Expect(3) = 6e-029
Identities = 51/72 (70%), Positives = 56/72 (77%)
Frame = -1 / -3
Query: 341 GLSEHRRRAWLXXXXXXXXXXXXXXWIR*RRPCGSSCRKPPPWRRIA*SHPR*LENLRSA 162
GLSEHRRRAWL WI+*R+PCGSSCRKPPPWR+IA*SHPR*L++LRSA
Sbjct: 332 GLSEHRRRAWLSSPSLGSCRTGSWGWIQ*RKPCGSSCRKPPPWRQIA*SHPR*LQSLRSA 153
Query: 161 R*RRPGFHQQGH 126
R*RRP FHQQ H
Sbjct: 152 R*RRPEFHQQDH 117
Score = 37.7 bits (76), Expect(4) = 7e-071
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / -2
Query: 582 YCRNQACSLGQKQHRDDVYIVYEHYTQ 502
YCR+Q CSLGQK +YI + + TQ
Sbjct: 558 YCRHQPCSLGQKNIDTSIYISFMNITQ 478
Score = 28.1 bits (55), Expect(4) = 7e-071
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 457 FHRNTCPFCCQFMN 416
FHR T FCC FMN
Sbjct: 436 FHRITRLFCCPFMN 395
Score = 27.6 bits (54), Expect(5) = 2e-039
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 531 VYIVYEHYTQGQQTD 487
+YIVYEHYT Q +
Sbjct: 505 IYIVYEHYTNRQTNE 461
Score = 26.7 bits (52), Expect(5) = 3e-071
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 496 LALCVMFINDIDVVSMLF 549
L++CVMFINDI + +F
Sbjct: 470 LSVCVMFINDIYIDVSIF 523
Score = 26.7 bits (52), Expect(5) = 2e-039
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 455 PQEYVSLLLPVHE* 414
PQ+Y LLLP HE*
Sbjct: 434 PQDYAPLLLPFHE* 393
Score = 26.3 bits (51), Expect(4) = 4e-055
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 504 VCNVHKRYRRRLYVVF 551
+CNVHKRY R +F
Sbjct: 478 LCNVHKRYIYRCIYIF 525
Score = 25.4 bits (49), Expect(4) = 4e-055
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 549 FDPKNKPDYGN 581
FDPKNK D GN
Sbjct: 525 FDPKNKADDGN 557
Score = 25.4 bits (49), Expect(5) = 3e-071
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 544 LFLTQRTSLITAI 582
+FLTQRT L+TAI
Sbjct: 520 IFLTQRTRLMTAI 558
Score = 24.9 bits (48), Expect(5) = 3e-071
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 415 YS*TGNRRDTYSCGTHVARK 474
YS* GNRR SCG + ++
Sbjct: 394 YS*KGNRRGA*SCGNMLPKE 453
Score = 24.4 bits (47), Expect(5) = 2e-039
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 581 IAVIRLVLWVK 549
IAVI LVLWVK
Sbjct: 557 IAVISLVLWVK 525
Score = 24.0 bits (46), Expect(4) = 4e-055
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 416 IHELATEGTRIPVEHMLPER 475
IHE ATE R PVE +R
Sbjct: 395 IHERATEEARNPVETCCQKR 454
Score = 24.0 bits (46), Expect(3) = 6e-029
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 583 VLP*SGLFFGSK 548
VLP S LFFGSK
Sbjct: 559 VLPSSALFFGSK 524
Score = 23.1 bits (44), Expect(3) = 6e-029
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1 / -2
Query: 551 KNNIETTSISFMNITHRANKQTN*NLF 471
+ NI+T+ + +KQTN*NLF
Sbjct: 528 QKNIDTSIYISFMNITQTDKQTN*NLF 448
Score = 21.7 bits (41), Expect(5) = 2e-039
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 38 CT**SP*AC 12
CT**SP*AC
Sbjct: 29 CT**SP*AC 3
Score = 21.7 bits (41), Expect(5) = 3e-071
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 469 RKRF*FVCL 495
+KRF*FVCL
Sbjct: 446 QKRF*FVCL 472
Score = 21.7 bits (41), Expect(4) = 7e-071
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -3
Query: 407 YRHYIAFF 384
YR+YIAFF
Sbjct: 389 YRYYIAFF 366
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 248 bits (537), Expect = 4e-065
Identities = 108/112 (96%), Positives = 110/112 (98%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKEIIKYKG QVPPAELEALLITHPEIKDAAVVSM DDLAGEIPVAFIVRTEGS+
Sbjct: 48 FIVDRLKEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSE 227
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH* 337
VTEDEIKQFVAKEVVFYKKIHKVFF+ESIPKNPSGKILRKDLRARLAAGVH*
Sbjct: 228 VTEDEIKQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDLRARLAAGVH* 383
Score = 236 bits (510), Expect = 2e-061
Identities = 108/112 (96%), Positives = 108/112 (96%)
Frame = -3 / -3
Query: 336 Q*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTM 157
Q*TPAASLALKSFLRILPDGFLGMDS KKTLWIFL*KTTSLATNCLISSSVT EPSVRTM
Sbjct: 382 Q*TPAASLALKSFLRILPDGFLGMDSEKKTLWIFL*KTTSLATNCLISSSVTSEPSVRTM 203
Query: 156 KATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
KATGISPARSSFIDTTAASLISGCVMRSASSSAGGT PLYLMISLSLSTMK
Sbjct: 202 KATGISPARSSFIDTTAASLISGCVMRSASSSAGGTCNPLYLMISLSLSTMK 47
Score = 196 bits (423), Expect = 2e-049
Identities = 84/112 (75%), Positives = 87/112 (77%)
Frame = +1 / +2
Query: 1 LHRRQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRINER*PCW*NPGRLHRADRRFS 180
LHRRQAQGDHQVQG+ DQGRRRR+NE * CW*NPGRLHRADRR
Sbjct: 47 LHRRQAQGDHQVQGVTGAAGRARGAPHHAPGDQGRRRRVNEG*SCW*NPGRLHRADRRL* 226
Query: 181 SHRG*DQAIRRQGGGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSL 336
SHRG*DQAI RQGGGFLQEDPQG L IHPQEPV QDP+EGLESQARRRCSL
Sbjct: 227 SHRG*DQAICRQGGGFLQEDPQGFLL*IHPQEPVRQDPKEGLESQARRRCSL 382
Score = 133 bits (285), Expect(2) = 2e-032
Identities = 57/79 (72%), Positives = 61/79 (77%)
Frame = -2 / -2
Query: 337 SVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENHXXXXXXXXXXXXXLRTFGPHD 158
SVNTGGEPGSQVLP DLA RVLGDGF EE+LVDLLVENH R FGPHD
Sbjct: 383 SVNTGGEPGSQVLP*DLAGRVLGDGFREENLVDLLVENHLLGDKLLDLILGDFRAFGPHD 204
Query: 157 EGDRDFTSKVIVH*YDGGV 101
EGDRDFTSK+I+H*+DGGV
Sbjct: 203 EGDRDFTSKIILH*HDGGV 147
Score = 119 bits (255), Expect = 3e-026
Identities = 50/71 (70%), Positives = 55/71 (77%)
Frame = -1 / -1
Query: 338 LSEHRRRAWLXXXXXXXXXXXXXXWIR*RRPCGSSCRKPPPWRRIA*SHPR*LENLRSAR 159
LSEHRRRAWL WI+ R+PCGSSCRKPPPWR+IA*SHPR*L++LRSAR
Sbjct: 384 LSEHRRRAWLSSPSLGSCRTGSWGWIQRRKPCGSSCRKPPPWRQIA*SHPR*LQSLRSAR 205
Query: 158 *RRPGFHQQGH 126
*RRPGFHQQ H
Sbjct: 204 *RRPGFHQQDH 172
Score = 26.7 bits (52), Expect(2) = 2e-032
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 38 CT**SP*ACRR* 3
CT**SP*ACRR*
Sbjct: 84 CT**SP*ACRR* 49
>gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 721
Score = 94.1 bits (199), Expect(3) = 8e-057
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / +2
Query: 209 VAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 340
V +VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLA GVH*G
Sbjct: 575 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLARGVH*G 706
Score = 92.7 bits (196), Expect(3) = 3e-042
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1 / +1
Query: 220 GGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSLRPVCSF 354
GGFLQEDPQG LH IHPQEPV QDP+EGLESQAR RCSLRP +F
Sbjct: 586 GGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARPRCSLRPYTAF 720
Score = 91.3 bits (193), Expect(3) = 8e-057
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 98 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 214
Score = 90.4 bits (191), Expect(3) = 2e-054
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = -3 / -2
Query: 339 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLAT 208
PQ*TP ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTT T
Sbjct: 705 PQ*TPRASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTCSIT 574
Score = 88.6 bits (187), Expect(3) = 2e-054
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -3 / -2
Query: 117 DTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
DTTAASLISGCVMRSASSSAGGTW PLYLMISLSLSTMK
Sbjct: 213 DTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMK 97
Score = 81.7 bits (172), Expect(3) = 4e-032
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2 / -1
Query: 340 ASVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENH 221
ASVNT GEPGSQVLP DLA RVLGDGF EE+LVDLLVENH
Sbjct: 706 ASVNTAGEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENH 587
Score = 77.6 bits (163), Expect(3) = 8e-057
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +2
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
M DDLAGEIPVAFIVRTEGS+VTEDEIKQFVAKEV
Sbjct: 311 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 415
Score = 75.8 bits (159), Expect(3) = 2e-054
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3 / -2
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TSLATNCLISSSVT EPSVRTMKATGISPARSSFI
Sbjct: 414 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 310
Score = 71.2 bits (149), Expect(3) = 3e-042
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +1 / +1
Query: 118 NER*PCW*NPGRLHRADRRFSSHRG*DQAIRRQGG 222
NE * CW*NPGRLHRADRR SHRG*DQAI RQGG
Sbjct: 310 NEG*SCW*NPGRLHRADRRL*SHRG*DQAICRQGG 414
Score = 71.2 bits (149), Expect(3) = 4e-032
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -1 / -3
Query: 221 PPWRRIA*SHPR*LENLRSAR*RRPGFHQQGH 126
PPWR+IA*SHPR*L++LRSAR*RRPGFHQQ H
Sbjct: 413 PPWRQIA*SHPR*LQSLRSAR*RRPGFHQQDH 318
Score = 50.1 bits (103), Expect(3) = 3e-042
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / +1
Query: 1 LHRRQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRI 117
LHRRQAQGDHQVQG+ DQGRRRR+
Sbjct: 97 LHRRQAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRV 213
Score = 26.7 bits (52), Expect(3) = 4e-032
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 38 CT**SP*ACRR* 3
CT**SP*ACRR*
Sbjct: 134 CT**SP*ACRR* 99
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 200 bits (431), Expect = 2e-050
Identities = 83/109 (76%), Positives = 96/109 (88%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEA+LI HP I DAAVV M DD GEIPVAF+V + G +
Sbjct: 305 FIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVPMKDDSCGEIPVAFVVTSGGYE 484
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAG 328
+TEDEIKQ+VAK+VVFYK++HKVFF E+IPK PSGKILRKDLRA+LA+G
Sbjct: 485 MTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKDLRAKLASG 631
Score = 149 bits (320), Expect = 4e-035
Identities = 75/113 (66%), Positives = 78/113 (69%)
Frame = -3 / -2
Query: 339 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRT 160
P P AS AL+SFLRILPDG LG+ S KKTL L* TT AT CLISSSV P T
Sbjct: 642 PLENPDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS*PPDVT 463
Query: 159 MKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
ATGISP SSFI TTAAS + G M ASSSAG TW PLYLM SLSLSTMK
Sbjct: 462 TNATGISPQESSFIGTTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMK 304
>gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284g08, DNA
sequence
Length = 724
Score = 91.3 bits (193), Expect(3) = 2e-050
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 687 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 571
Score = 82.6 bits (174), Expect(3) = 1e-038
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = -3 / +2
Query: 117 DTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTM 4
+TTAASLISGCVMR ASSSAGGTWKPLYL+ISLSLSTM
Sbjct: 572 ETTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTM 685
Score = 80.3 bits (169), Expect(3) = 2e-050
Identities = 32/37 (86%), Positives = 37/37 (100%)
Frame = +2 / -2
Query: 221 VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
VVFYK+I++VFFT+SIPKNPSGKILRKDLRARLAAG+
Sbjct: 135 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 25
Score = 69.8 bits (146), Expect(3) = 2e-050
Identities = 26/36 (72%), Positives = 35/36 (97%)
Frame = +2 / -1
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
M D+LAGE+PVAFI+R+EGS+++E+EIKQFVAKEV+
Sbjct: 466 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 359
Score = 63.4 bits (132), Expect(3) = 1e-038
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -3 / +2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTT 220
PAAS AL+SFLRILP+GF GM+SVKKTL I L* TT
Sbjct: 29 PAASRALRSFLRILPEGFFGMESVKKTLLILL*NTT 136
Score = 55.6 bits (115), Expect(3) = 1e-038
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / +3
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TS ATNCLIS S+ EPS+R M ATG SPA SSFI
Sbjct: 363 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 467
>gb|CW194291.1|CW194291 104_617_11180020_116_36786_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 688
Score = 96.4 bits (204), Expect(4) = 2e-042
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2 / -2
Query: 209 VAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 340
V +VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G
Sbjct: 288 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 157
Score = 95.9 bits (203), Expect(3) = 2e-035
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +1 / -1
Query: 220 GGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSLRPVCSF 354
GGFLQEDPQG LH IHPQEPV QDP+EGLESQARRRCSLRP +F
Sbjct: 277 GGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARRRCSLRPYTAF 143
Score = 93.2 bits (197), Expect(6) = 1e-045
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -3 / +2
Query: 360 REEAAYGPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLAT 208
R ++ PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTT T
Sbjct: 137 RLKSCIRPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTCSIT 289
Score = 85.8 bits (181), Expect(3) = 2e-033
Identities = 37/47 (78%), Positives = 38/47 (80%)
Frame = -2 / +1
Query: 361 PRRSCIRASVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENH 221
P ASVNTGGEPGSQVLP DLA RVLGDGF EE+LVDLLVENH
Sbjct: 136 PSEKLYTASVNTGGEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENH 276
Score = 77.6 bits (163), Expect(4) = 2e-042
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / -2
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
M DDLAGEIPVAFIVRTEGS+VTEDEIKQFVAKEV
Sbjct: 552 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 448
Score = 75.8 bits (159), Expect(6) = 1e-045
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3 / +2
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TSLATNCLISSSVT EPSVRTMKATGISPARSSFI
Sbjct: 449 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 553
Score = 71.2 bits (149), Expect(3) = 2e-033
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -1 / +3
Query: 221 PPWRRIA*SHPR*LENLRSAR*RRPGFHQQGH 126
PPWR+IA*SHPR*L++LRSAR*RRPGFHQQ H
Sbjct: 450 PPWRQIA*SHPR*LQSLRSAR*RRPGFHQQDH 545
Score = 71.2 bits (149), Expect(3) = 2e-035
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +1 / -1
Query: 118 NER*PCW*NPGRLHRADRRFSSHRG*DQAIRRQGG 222
NE * CW*NPGRLHRADRR SHRG*DQAI RQGG
Sbjct: 553 NEG*SCW*NPGRLHRADRRL*SHRG*DQAICRQGG 449
Score = 32.2 bits (64), Expect(6) = 1e-045
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / +2
Query: 117 DTTAASLISGCVM 79
DTTAASLISGCVM
Sbjct: 650 DTTAASLISGCVM 688
Score = 32.2 bits (64), Expect(4) = 2e-042
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2 / -2
Query: 80 ITHPEIKDAAVVS 118
ITHPEIKDAAVVS
Sbjct: 687 ITHPEIKDAAVVS 649
Score = 28.6 bits (56), Expect(6) = 1e-045
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 457 FHRNTCPFCCQFMNS 413
FHR T FCC FMN+
Sbjct: 51 FHRITRLFCCPFMNN 95
Score = 26.7 bits (52), Expect(3) = 2e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 455 PQEYVSLLLPVHE* 414
PQ+Y LLLP HE*
Sbjct: 53 PQDYAPLLLPFHE* 94
Score = 25.8 bits (50), Expect(4) = 2e-042
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -2
Query: 412 YYS*TGNRRDTYSCGTHVARK 474
+YS* GNRR SCG + ++
Sbjct: 96 HYS*KGNRRGA*SCGNMLPKE 34
Score = 24.0 bits (46), Expect(3) = 2e-035
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 416 IHELATEGTRIPVEHMLPER 475
IHE ATE R PVE +R
Sbjct: 92 IHERATEEARNPVETCCQKR 33
Score = 23.1 bits (44), Expect(6) = 1e-045
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 386 FFAAAWWPSEK 354
FF +A WPSEK
Sbjct: 115 FFFSAVWPSEK 147
Score = 22.1 bits (42), Expect(6) = 1e-045
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 413 *CYRHYIAFF 384
*CYR+ IAFF
Sbjct: 92 *CYRYCIAFF 121
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 127 bits (271), Expect(2) = 2e-045
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +2 / -3
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILR 298
M DD GEIPVAF+V + G ++TEDEIKQ+VAK+VVFYK++HKVFF E+IPK PSGKILR
Sbjct: 324 MKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILR 145
Query: 299 KDLRARLAAG 328
KDLRA+LA+G
Sbjct: 144 KDLRAKLASG 115
Score = 90.9 bits (192), Expect(2) = 2e-030
Identities = 47/74 (63%), Positives = 49/74 (66%)
Frame = -3 / +2
Query: 339 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRT 160
P P AS AL+SFLRILPDG LG+ S KKTL L* TT AT CLISSSV P T
Sbjct: 104 PLENPDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS*PPDVT 283
Query: 159 MKATGISPARSSFI 118
ATGISP SSFI
Sbjct: 284 TNATGISPQESSFI 325
Score = 76.7 bits (161), Expect(2) = 2e-045
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2 / -1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKE+IKYKGFQV PAELEA+LI HP I DAAVV
Sbjct: 551 FIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVV 438
Score = 62.5 bits (130), Expect(2) = 2e-030
Identities = 29/43 (67%), Positives = 31/43 (72%)
Frame = -3 / +1
Query: 129 SSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
+S TTAAS + G M ASSSAG TW PLYLM SLSLSTMK
Sbjct: 424 TSTYGTTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMK 552
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 177 bits (382), Expect = 1e-043
Identities = 72/102 (70%), Positives = 87/102 (85%)
Frame = +2 / +3
Query: 20 KEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEI 199
KE+IK+KGFQVPPAELEALLI HP I DAAVV DD AGE+PVAF+VR S + ED I
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 200 KQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAA 325
K+FV+K+VVFYK++HKV+FT SIPK+ SGKILR++LRA+LAA
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRRELRAKLAA 308
Score = 128 bits (275), Expect = 6e-029
Identities = 64/102 (62%), Positives = 69/102 (67%)
Frame = -3 / -2
Query: 324 AASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATG 145
AASLA S LRI PD LGM+ VK TL L* TT L TN L++SS E + RT KATG
Sbjct: 307 AASLARSSLLRIFPDADLGMEGVKYTLCSLL*NTTCLETNSLMASSAMSESAARTTKATG 128
Query: 144 ISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISL 19
SPA SSF TTAAS + G M ASSSAGGTWKPL LM SL
Sbjct: 127 TSPAASSFCGTTAASAMDGWAMSRASSSAGGTWKPLNLMSSL 2
>gb|CW353056.1|CW353056 fsbb001f015k03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015k03, DNA
sequence
Length = 665
Score = 96.4 bits (204), Expect(3) = 2e-038
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2 / -1
Query: 209 VAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 340
V +VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G
Sbjct: 296 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH*G 165
Score = 95.9 bits (203), Expect(3) = 2e-035
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +1 / -3
Query: 220 GGFLQEDPQGLLHRIHPQEPVGQDPEEGLESQARRRCSLRPVCSF 354
GGFLQEDPQG LH IHPQEPV QDP+EGLESQARRRCSLRP +F
Sbjct: 285 GGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARRRCSLRPYTAF 151
Score = 93.2 bits (197), Expect(5) = 7e-041
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -3 / +1
Query: 360 REEAAYGPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLAT 208
R ++ PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTT T
Sbjct: 145 RLKSCIRPQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTCSIT 297
Score = 85.8 bits (181), Expect(3) = 2e-033
Identities = 37/47 (78%), Positives = 38/47 (80%)
Frame = -2 / +3
Query: 361 PRRSCIRASVNTGGEPGSQVLPQDLARRVLGDGFGEEDLVDLLVENH 221
P ASVNTGGEPGSQVLP DLA RVLGDGF EE+LVDLLVENH
Sbjct: 144 PSEKLYTASVNTGGEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENH 284
Score = 77.6 bits (163), Expect(3) = 2e-038
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / -1
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
M DDLAGEIPVAFIVRTEGS+VTEDEIKQFVAKEV
Sbjct: 560 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 456
Score = 75.8 bits (159), Expect(5) = 7e-041
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3 / +1
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TSLATNCLISSSVT EPSVRTMKATGISPARSSFI
Sbjct: 457 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 561
Score = 71.2 bits (149), Expect(3) = 2e-033
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -1 / +2
Query: 221 PPWRRIA*SHPR*LENLRSAR*RRPGFHQQGH 126
PPWR+IA*SHPR*L++LRSAR*RRPGFHQQ H
Sbjct: 458 PPWRQIA*SHPR*LQSLRSAR*RRPGFHQQDH 553
Score = 71.2 bits (149), Expect(3) = 2e-035
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +1 / -3
Query: 118 NER*PCW*NPGRLHRADRRFSSHRG*DQAIRRQGG 222
NE * CW*NPGRLHRADRR SHRG*DQAI RQGG
Sbjct: 561 NEG*SCW*NPGRLHRADRRL*SHRG*DQAICRQGG 457
Score = 28.6 bits (56), Expect(5) = 7e-041
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 457 FHRNTCPFCCQFMNS 413
FHR T FCC FMN+
Sbjct: 59 FHRITRLFCCPFMNN 103
Score = 27.2 bits (53), Expect(3) = 2e-038
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1 / -1
Query: 412 YYS*TGNRRDTYSCGTHVARKRF*FVCLL 498
+YS* GNRR SCG ++ CLL
Sbjct: 104 HYS*KGNRRGA*SCGNMFQKRF*LVCCLL 18
Score = 26.7 bits (52), Expect(3) = 2e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 455 PQEYVSLLLPVHE* 414
PQ+Y LLLP HE*
Sbjct: 61 PQDYAPLLLPFHE* 102
Score = 23.5 bits (45), Expect(3) = 2e-035
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3 / -3
Query: 414 LFMNWQQKGHVFLW 455
LFM QQK V LW
Sbjct: 102 LFMKGQQKRRVILW 61
Score = 23.1 bits (44), Expect(5) = 7e-041
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 386 FFAAAWWPSEK 354
FF +A WPSEK
Sbjct: 123 FFFSAVWPSEK 155
Score = 22.1 bits (42), Expect(5) = 7e-041
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 413 *CYRHYIAFF 384
*CYR+ IAFF
Sbjct: 100 *CYRYCIAFF 129
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 165 bits (354), Expect = 8e-040
Identities = 67/80 (83%), Positives = 79/80 (98%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKEIIKYKGFQVPPAE+EALLITHPEI+DAAVVSM D+LAGE+PVAFI+++EGS+
Sbjct: 441 FIVDRLKEIIKYKGFQVPPAEVEALLITHPEIRDAAVVSMKDELAGEVPVAFIIQSEGSE 620
Query: 182 VTEDEIKQFVAKEVVFYKKI 241
++E+EIKQFVAKEVVFYK+I
Sbjct: 621 ISENEIKQFVAKEVVFYKRI 680
Score = 136 bits (292), Expect = 3e-031
Identities = 62/79 (78%), Positives = 67/79 (84%)
Frame = -3 / -1
Query: 240 IFL*KTTSLATNCLISSSVT*EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSS 61
I L* TTS ATNCLIS S+ EPS+ M ATG SPA SSFI+TTAASLISGCVMR AS+S
Sbjct: 679 ILL*NTTSFATNCLISFSLISEPSLCIMNATGTSPASSSFIETTAASLISGCVMRRASTS 500
Query: 60 AGGTWKPLYLMISLSLSTM 4
AGGTWKPLYL+ISLSLSTM
Sbjct: 499 AGGTWKPLYLIISLSLSTM 443
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 102 bits (217), Expect(2) = 4e-038
Identities = 38/61 (62%), Positives = 53/61 (86%)
Frame = +2 / +2
Query: 137 GEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRAR 316
GEIPVAF+ + +GS+++ED++KQFVAKEV++YKK+ +V F + IPK PSGKILRK+LR +
Sbjct: 653 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKELRKQ 832
Query: 317 L 319
L
Sbjct: 833 L 835
Score = 77.1 bits (162), Expect(2) = 4e-038
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKEIIKYKG QV PAE+EALLITHP I DAAVV
Sbjct: 515 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 628
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 102 bits (217), Expect(2) = 4e-038
Identities = 38/61 (62%), Positives = 53/61 (86%)
Frame = +2 / +2
Query: 137 GEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRAR 316
GEIPVAF+ + +GS+++ED++KQFVAKEV++YKK+ +V F + IPK PSGKILRK+LR +
Sbjct: 260 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKELRKQ 439
Query: 317 L 319
L
Sbjct: 440 L 442
Score = 77.1 bits (162), Expect(2) = 4e-038
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKEIIKYKG QV PAE+EALLITHP I DAAVV
Sbjct: 122 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 235
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 102 bits (217), Expect(2) = 4e-038
Identities = 38/61 (62%), Positives = 53/61 (86%)
Frame = +2 / +1
Query: 137 GEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRAR 316
GEIPVAF+ + +GS+++ED++KQFVAKEV++YKK+ +V F + IPK PSGKILRK+LR +
Sbjct: 421 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKELRKQ 600
Query: 317 L 319
L
Sbjct: 601 L 603
Score = 77.1 bits (162), Expect(2) = 4e-038
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKEIIKYKG QV PAE+EALLITHP I DAAVV
Sbjct: 283 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 396
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 157 bits (338), Expect = 1e-037
Identities = 64/102 (62%), Positives = 81/102 (79%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QVPPAELEALL+TH EI+D AV+ D G+ P+A++VR +GS
Sbjct: 125 FVVDRLKELIKYKGYQVPPAELEALLLTHSEIQDVAVIPFPDREVGQFPMAYVVRKKGSN 304
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E E+ +FVAK+V YKK+ KV F IPKN SGKILRKDL
Sbjct: 305 LSEREVMEFVAKQVAPYKKVRKVAFVTEIPKNASGKILRKDL 430
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 149 bits (321), Expect = 3e-035
Identities = 59/102 (57%), Positives = 82/102 (80%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
+IVDRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+ D+ G++P+AFIVR GS
Sbjct: 67 YIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSN 246
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+T+ ++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 247 LTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 372
>gb|CN143608.1|CN143608 WOUND1_17_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_G06_A002 3', mRNA sequence
Length = 478
Score = 149 bits (319), Expect = 5e-035
Identities = 61/79 (77%), Positives = 74/79 (93%)
Frame = +2 / +1
Query: 95 IKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPK 274
IKDAAVVSM D+LAGE+PVAFI+R+EGS+++E+EIK FVAKEVVF K+I++VFFT+SIPK
Sbjct: 1 IKDAAVVSMKDELAGEVPVAFIIRSEGSEISENEIKHFVAKEVVFSKRINRVFFTDSIPK 180
Query: 275 NPSGKILRKDLRARLAAGV 331
NPSGKI RKDLRARLAA +
Sbjct: 181 NPSGKIFRKDLRARLAAAI 237
Score = 116 bits (249), Expect = 2e-025
Identities = 54/76 (71%), Positives = 61/76 (80%)
Frame = -3 / -3
Query: 324 AASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATG 145
AAS AL+SFL+ILP+GF GM+SVKKTL I L TTS AT CLIS S+ EPS+R M ATG
Sbjct: 230 AASRALRSFLKILPEGFFGMESVKKTLLILLENTTSFATKCLISFSLISEPSLRIMNATG 51
Query: 144 ISPARSSFIDTTAASL 97
SPA SSFI+TTAASL
Sbjct: 50 TSPASSSFIETTAASL 3
>gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117099, DNA
sequence
Length = 664
Score = 91.3 bits (193), Expect(2) = 5e-035
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2 / -1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 445 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 329
Score = 88.6 bits (187), Expect(2) = 1e-033
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -3 / +3
Query: 117 DTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
DTTAASLISGCVMRSASSSAGGTW PLYLMISLSLSTMK
Sbjct: 330 DTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMK 446
Score = 77.6 bits (163), Expect(2) = 5e-035
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / -1
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
M DDLAGEIPVAFIVRTEGS+VTEDEIKQFVAKEV
Sbjct: 232 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 128
Score = 75.8 bits (159), Expect(2) = 1e-033
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3 / +3
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TSLATNCLISSSVT EPSVRTMKATGISPARSSFI
Sbjct: 129 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 233
Score = 71.2 bits (149), Expect(2) = 8e-021
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +1 / -3
Query: 118 NER*PCW*NPGRLHRADRRFSSHRG*DQAIRRQGG 222
NE * CW*NPGRLHRADRR SHRG*DQAI RQGG
Sbjct: 233 NEG*SCW*NPGRLHRADRRL*SHRG*DQAICRQGG 129
Score = 50.1 bits (103), Expect(2) = 8e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 1 LHRRQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRI 117
LHRRQAQGDHQVQG+ DQGRRRR+
Sbjct: 446 LHRRQAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRV 330
>gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502381, DNA
sequence
Length = 541
Score = 91.3 bits (193), Expect(2) = 5e-035
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 507 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 391
Score = 88.6 bits (187), Expect(2) = 1e-033
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -3 / +2
Query: 117 DTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
DTTAASLISGCVMRSASSSAGGTW PLYLMISLSLSTMK
Sbjct: 392 DTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMK 508
Score = 77.6 bits (163), Expect(2) = 5e-035
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / -2
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
M DDLAGEIPVAFIVRTEGS+VTEDEIKQFVAKEV
Sbjct: 294 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 190
Score = 75.8 bits (159), Expect(2) = 1e-033
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3 / +2
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TSLATNCLISSSVT EPSVRTMKATGISPARSSFI
Sbjct: 191 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 295
Score = 71.2 bits (149), Expect(2) = 8e-021
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +1 / -1
Query: 118 NER*PCW*NPGRLHRADRRFSSHRG*DQAIRRQGG 222
NE * CW*NPGRLHRADRR SHRG*DQAI RQGG
Sbjct: 295 NEG*SCW*NPGRLHRADRRL*SHRG*DQAICRQGG 191
Score = 50.1 bits (103), Expect(2) = 8e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 1 LHRRQAQGDHQVQGLXXXXXXXXXXXXXXXXDQGRRRRI 117
LHRRQAQGDHQVQG+ DQGRRRR+
Sbjct: 508 LHRRQAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRV 392
>gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779929, DNA
sequence
Length = 743
Score = 77.1 bits (162), Expect(3) = 6e-035
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKEIIKYKG QV PAE+EALLITHP I DAAVV
Sbjct: 93 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 206
Score = 57.4 bits (119), Expect(3) = 6e-035
Identities = 20/31 (64%), Positives = 29/31 (93%)
Frame = +2 / +3
Query: 137 GEIPVAFIVRTEGSQVTEDEIKQFVAKEVVF 229
GEIPVAF+ + +GS+++ED++KQFVAKEV+F
Sbjct: 348 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIF 440
Score = 54.7 bits (113), Expect(3) = 6e-035
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 218 EVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+V++YKK+ +V F + IPK PSGKILRK+LR +L
Sbjct: 570 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQL 671
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 146 bits (314), Expect = 2e-034
Identities = 58/102 (56%), Positives = 81/102 (79%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
+IVDRLKE+IKYKG+QVPPAEL +L +HP+I DAAV+ D+ G++P+AFIVR GS
Sbjct: 115 YIVDRLKELIKYKGYQVPPAELGHILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSN 294
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+T+ ++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 295 LTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 420
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 146 bits (313), Expect = 3e-034
Identities = 56/105 (53%), Positives = 84/105 (80%)
Frame = +2 / +1
Query: 5 IVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQV 184
+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DAAV+ D AGE+P+A++VR+ S +
Sbjct: 91 VVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAAVIPYPDPEAGEVPIAYVVRSPKSSL 270
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
E ++++F+ K+V YK++ KV F +S+PK+ +GKILR++L A++
Sbjct: 271 AEVDVQKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRRELIAQV 405
>gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 759
Score = 91.3 bits (193), Expect(2) = 1e-032
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2 / -3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 469 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 353
Score = 82.6 bits (174), Expect(2) = 7e-026
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = -3 / +3
Query: 117 DTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTM 4
+TTAASLISGCVMR ASSSAGGTWKPLYL+ISLSLSTM
Sbjct: 354 ETTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTM 467
Score = 69.8 bits (146), Expect(2) = 1e-032
Identities = 26/36 (72%), Positives = 35/36 (97%)
Frame = +2 / -2
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
M D+LAGE+PVAFI+R+EGS+++E+EIKQFVAKEV+
Sbjct: 248 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 141
Score = 55.6 bits (115), Expect(2) = 7e-026
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / +1
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TS ATNCLIS S+ EPS+R M ATG SPA SSFI
Sbjct: 145 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 249
>gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 694
Score = 91.3 bits (193), Expect(2) = 1e-032
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 210 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 326
Score = 82.6 bits (174), Expect(2) = 7e-026
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = -3 / -1
Query: 117 DTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTM 4
+TTAASLISGCVMR ASSSAGGTWKPLYL+ISLSLSTM
Sbjct: 325 ETTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTM 212
Score = 69.8 bits (146), Expect(2) = 1e-032
Identities = 26/36 (72%), Positives = 35/36 (97%)
Frame = +2 / +2
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
M D+LAGE+PVAFI+R+EGS+++E+EIKQFVAKEV+
Sbjct: 431 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 538
Score = 55.6 bits (115), Expect(2) = 7e-026
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
TS ATNCLIS S+ EPS+R M ATG SPA SSFI
Sbjct: 534 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 430
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 138 bits (295), Expect = 1e-031
Identities = 55/103 (53%), Positives = 79/103 (76%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDR+KE+IKYKGFQV PAELEA+L++HP ++DAAV + D+ AGE+P + +VR G+
Sbjct: 118 FIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAP 297
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLR 310
+E ++ +VA+ V YKK+ + F ++IPK+ SGKILR+ LR
Sbjct: 298 ESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRRQLR 426
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 80.8 bits (170), Expect(2) = 3e-031
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = +2 / +3
Query: 137 GEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGK 289
GEIPVAF+ + +GS+++ED++KQFVAKEV++YKK+ +V F + IPK P +
Sbjct: 459 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPRAR 611
Score = 75.8 bits (159), Expect(2) = 3e-031
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKEIIKYKG QV PAE+EALLITHP I DA+VV
Sbjct: 321 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADASVV 434
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 91.8 bits (194), Expect(2) = 2e-029
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIV 163
+IVDRLKE+IK KGFQV PAELEA+L+THP+I DAAV+ D+ AGE+P AF+V
Sbjct: 228 YIVDRLKELIKTKGFQVAPAELEAILLTHPKIADAAVIPSPDERAGEVPKAFVV 389
Score = 58.3 bits (121), Expect(2) = 2e-029
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2 / +3
Query: 158 IVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRAR 316
+ + + E E+ FVA +V +K++H V F E+IPK SGKILR+DL+ R
Sbjct: 387 VAKPNAGPLAEAEVMDFVAGKVAHFKRLHFVEFVEAIPKTSSGKILRRDLKER 545
>gb|CW331180.1|CW331180 104_828_11480770_116_36026_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 683
Score = 80.3 bits (169), Expect(2) = 7e-029
Identities = 32/37 (86%), Positives = 37/37 (100%)
Frame = +2 / -1
Query: 221 VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
VVFYK+I++VFFT+SIPKNPSGKILRKDLRARLAAG+
Sbjct: 248 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 138
Score = 69.8 bits (146), Expect(2) = 7e-029
Identities = 26/36 (72%), Positives = 35/36 (97%)
Frame = +2 / -3
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
M D+LAGE+PVAFI+R+EGS+++E+EIKQFVAKEV+
Sbjct: 579 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 472
>gb|CW361238.1|CW361238 fsbb001f029k23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029k23, DNA
sequence
Length = 594
Score = 127 bits (271), Expect = 2e-028
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +2 / -2
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILR 298
M DD GEIPVAF+V + G ++TEDEIKQ+VAK+VVFYK++HKVFF E+IPK PSGKILR
Sbjct: 446 MKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILR 267
Query: 299 KDLRARLAAG 328
KDLRA+LA+G
Sbjct: 266 KDLRAKLASG 237
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 73.9 bits (155), Expect(2) = 8e-027
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAV 112
FIVDR+KE+IKYKGFQV PAELEA+L++HP ++DAAV
Sbjct: 348 FIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 458
Score = 67.5 bits (141), Expect(2) = 8e-027
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2 / +2
Query: 125 DDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKD 304
D+ AGE+P + +VR G+ +E ++ +VA+ V YKK+ + F ++IPK+ SGKILR+
Sbjct: 548 DEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRRQ 727
Query: 305 LR 310
LR
Sbjct: 728 LR 733
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 73.9 bits (155), Expect(2) = 8e-027
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAV 112
FIVDR+KE+IKYKGFQV PAELEA+L++HP ++DAAV
Sbjct: 191 FIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 301
Score = 67.5 bits (141), Expect(2) = 8e-027
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2 / +1
Query: 125 DDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKD 304
D+ AGE+P + +VR G+ +E ++ +VA+ V YKK+ + F ++IPK+ SGKILR+
Sbjct: 391 DEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRRQ 570
Query: 305 LR 310
LR
Sbjct: 571 LR 576
>gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 632
Score = 77.1 bits (162), Expect(3) = 1e-025
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKEIIKYKG QV PAE+EALLITHP I DAAVV
Sbjct: 114 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 227
Score = 57.4 bits (119), Expect(3) = 1e-025
Identities = 20/31 (64%), Positives = 29/31 (93%)
Frame = +2 / +3
Query: 137 GEIPVAFIVRTEGSQVTEDEIKQFVAKEVVF 229
GEIPVAF+ + +GS+++ED++KQFVAKEV+F
Sbjct: 369 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIF 461
Score = 22.6 bits (43), Expect(3) = 1e-025
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 218 EVVFYKKIHKVFF 256
+V++YKK+ +V F
Sbjct: 591 QVIYYKKVREVIF 629
>gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188585, DNA
sequence
Length = 625
Score = 67.5 bits (141), Expect(2) = 2e-023
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2 / +3
Query: 125 DDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKD 304
D+ AGE+P + +VR G+ +E ++ +VA+ V YKK+ + F ++IPK+ SGKILR+
Sbjct: 186 DEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRRQ 365
Query: 305 LR 310
LR
Sbjct: 366 LR 371
Score = 62.5 bits (130), Expect(2) = 2e-023
Identities = 23/32 (71%), Positives = 30/32 (93%)
Frame = +2 / +1
Query: 17 LKEIIKYKGFQVPPAELEALLITHPEIKDAAV 112
+KE+IKYKGFQV PAELEA+L++HP ++DAAV
Sbjct: 1 IKELIKYKGFQVAPAELEAILLSHPSVEDAAV 96
>gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_E09_A002 5', mRNA sequence
Length = 781
Score = 83.5 bits (176), Expect(2) = 4e-023
Identities = 30/65 (46%), Positives = 52/65 (80%)
Frame = +2 / +3
Query: 125 DDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKD 304
D AGE+P+A++VR+ S +TE ++++F+ K+V +YKK+ +V F +S+PK+ SGKILR++
Sbjct: 126 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 305
Query: 305 LRARL 319
L A++
Sbjct: 306 LIAKV 320
Score = 45.5 bits (93), Expect(2) = 4e-023
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2 / +1
Query: 38 KGFQVPPAELEALLITHPEIKDAAVV 115
KGFQ+ P ELE LL++HPEI DA V+
Sbjct: 22 KGFQIAPFELEGLLLSHPEILDAVVI 99
>gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_80_A04_A002 3', mRNA sequence
Length = 681
Score = 105 bits (223), Expect = 9e-022
Identities = 39/82 (47%), Positives = 64/82 (78%)
Frame = +2 / +2
Query: 74 LLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVF 253
LL++HPEI DA V+ D AGE+P+A++VR+ S +TE ++++F+ K+V +YKK+ +V
Sbjct: 5 LLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVT 184
Query: 254 FTESIPKNPSGKILRKDLRARL 319
F +S+PK+ SGKILR++L A++
Sbjct: 185 FVDSVPKSASGKILRRELIAKV 250
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 709,857,211
Number of Sequences: 832831
Number of extensions: 10475217
Number of successful extensions: 125576
Number of sequences better than 1.0e-020: 37
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 19023795567
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)