TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067375.2.1
(1829 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN130960.1|CN130960 RHOH1_45_B03.b1_A002 Acid- and alkal... 536 e-170
gb|BE364125.1|BE364125 PI1_11_D07.g1_A002 Pathogen induced ... 480 e-141
gb|BZ627054.1|BZ627054 ih50a05.b1 WGS-SbicolorF (DH5a methy... 165 e-110
gb|CL704122.2|CL704122 SP__Bb0010P10.f SP__Bb Sorghum propi... 209 e-103
gb|BG050643.1|BG050643 FM1_70_H01.g1_A003 Floral-Induced Me... 342 3e-097
gb|CW276652.1|CW276652 104_750_11405606_116_35397_057 Sorgh... 215 6e-093
gb|BG050804.1|BG050804 FM1_70_H01.b1_A003 Floral-Induced Me... 330 6e-089
gb|CX614951.1|CX614951 GABR1_17_F12.b1_A002 GA- or brassino... 250 9e-084
gb|CW435810.1|CW435810 fsbb001f152c06k0 Sorghum methylation... 220 4e-077
gb|BZ627055.1|BZ627055 ih50a05.g1 WGS-SbicolorF (DH5a methy... 215 2e-065
gb|BG463033.1|BG463033 EM1_46_F12.g1_A002 Embryo 1 (EM1) So... 227 3e-063
gb|BI099230.1|BI099230 IP1_40_A12.g1_A002 Immature pannicle... 221 3e-061
gb|BG462976.1|BG462976 EM1_46_A04.g1_A002 Embryo 1 (EM1) So... 203 6e-056
gb|BI099139.1|BI099139 IP1_38_B12.g1_A002 Immature pannicle... 190 4e-052
gb|CF070574.1|CF070574 FE1_1_C02.b1_A002 Iron-deficient see... 100 9e-049
gb|BM326900.1|BM326900 PIC1_4_E07.g1_A002 Pathogen-infected... 173 6e-047
gb|BG103716.1|BG103716 RHIZ2_39_H10.g1_A003 Rhizome2 (RHIZ2... 184 4e-045
gb|BG410864.1|BG410864 EM1_26_H05.g1_A002 Embryo 1 (EM1) So... 178 2e-043
gb|CL184321.1|CL184321 104_397_10898775_114_32360_056 Sorgh... 87 3e-038
gb|CW078961.1|CW078961 104_397_10898775_114_32380_056 Sorgh... 84 2e-037
gb|BM326867.1|BM326867 PIC1_4_B01.g1_A002 Pathogen-infected... 139 8e-037
gb|BE597862.1|BE597862 PI1_66_C12.g1_A002 Pathogen induced ... 155 3e-036
gb|BF422038.1|BF422038 FM1_12_B10.g1_A003 Floral-Induced Me... 144 3e-033
gb|BM318323.1|BM318323 PI1_77_C05.g9_A002 Pathogen induced ... 136 9e-031
gb|CW276653.1|CW276653 104_750_11405606_148_35401_057 Sorgh... 100 1e-030
gb|BF177098.1|BF177098 EM1_3_F08.g1_A002 Embryo 1 (EM1) Sor... 130 6e-029
gb|BE596045.1|BE596045 PI1_51_F11.g1_A002 Pathogen induced ... 129 1e-028
gb|BI351044.1|BI351044 IP1_69_B01.g1_A002 Immature pannicle... 111 2e-028
gb|BE598152.1|BE598152 PI1_66_C12.b1_A002 Pathogen induced ... 83 1e-027
gb|CD212848.1|CD212848 HS1_16_B05.g1_A012 Heat-shocked seed... 107 2e-027
gb|CX615040.1|CX615040 GABR1_17_F12.g1_A002 GA- or brassino... 125 3e-027
gb|BG488446.1|BG488446 RHIZ2_63_G11.b1_A003 Rhizome2 (RHIZ2... 103 2e-026
gb|CL180611.1|CL180611 104_390_10896144_116_31930_288 Sorgh... 66 5e-025
gb|CL167624.1|CL167624 104_364_10810209_116_31803_273 Sorgh... 80 2e-024
gb|CD212733.1|CD212733 HS1_16_B05.b1_A012 Heat-shocked seed... 114 5e-024
gb|CW349038.1|CW349038 fsbb001f009l06f0 Sorghum methylation... 62 9e-024
gb|BF422126.1|BF422126 FM1_12_B10.b1_A003 Floral-Induced Me... 83 9e-024
gb|BG054057.1|BG054057 OV2_1_H05.g1_A002 Ovary 2 (OV2) Sorg... 111 4e-023
gb|CW436823.1|CW436823 fsbb001f153j23k0 Sorghum methylation... 80 3e-022
gb|AW672444.1|AW672444 LG1_359_C11.g1_A002 Light Grown 1 (L... 105 2e-021
>gb|CN130960.1|CN130960 RHOH1_45_B03.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_45_B03_A002 3', mRNA sequence
Length = 836
Score = 536 bits (1165), Expect(4) = e-170
Identities = 222/229 (96%), Positives = 226/229 (98%)
Frame = -3 / +3
Query: 1314 VRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKY 1135
VRTGMLPTDFDAFICNSGSDIYYP QSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKY
Sbjct: 3 VRTGMLPTDFDAFICNSGSDIYYPSQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKY 182
Query: 1134 LVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCH 955
LVKWASSVVERRGRTEKQ+IFEDSEHSSTY LAFRVVNPNHLPPLKELQKLMRIQSLRCH
Sbjct: 183 LVKWASSVVERRGRTEKQIIFEDSEHSSTYRLAFRVVNPNHLPPLKELQKLMRIQSLRCH 362
Query: 954 ALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTV 775
ALYNHGA RLSVIP+HASRSQALRYLSIRWGIELP+AVVIVGETGDSDYEELFGGLHKTV
Sbjct: 363 ALYNHGAARLSVIPIHASRSQALRYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTV 542
Query: 774 IVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
I+KGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ
Sbjct: 543 ILKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 689
Score = 532 bits (1156), Expect = e-150
Identities = 225/277 (81%), Positives = 238/277 (85%)
Frame = -2 / +2
Query: 1315 STHRHAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEV 1136
STHRHAP *L*CLYMQ*WE YILSIT+**CAKQFPCYIC+GP*LPITY VSLGRRRFKEV
Sbjct: 2 STHRHAPY*L*CLYMQ*WE*YILSITI**CAKQFPCYICIGP*LPITYRVSLGRRRFKEV 181
Query: 1135 LS*VGFFSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFASFEGAAKVDENPVTALS 956
LS*VGFFSSRKKGEN KA+HL*RF TLFNI SCI*SG*SKSFASFEGAAKVDENPVTALS
Sbjct: 182 LS*VGFFSSRKKGENRKANHL*RFRTLFNISSCI*SG*SKSFASFEGAAKVDENPVTALS 361
Query: 955 CSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDS 776
CSV*PWR QAICNSN+CIAISGSKVFVYSLGHRVA+CCGHCW*NW*F*LRGTVWRS QDS
Sbjct: 362 CSV*PWRRQAICNSNSCIAISGSKVFVYSLGHRVARCCGHCW*NW*F*LRGTVWRSSQDS 541
Query: 775 HR*GWIQHSCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYATTAWYTHTMTPT 596
H *GWIQHSCE*DPY QKVPFTGCCCS**LKYHWN*GIQHW*HQVCYAT +
Sbjct: 542 HP*GWIQHSCE*DPYSQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYATAWYTHTMTPSA 721
Query: 595 AIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSF 485
+ + +K+ + + L +E SDFACQSF
Sbjct: 722 ICFVINIKKETNEQHEYTIQTLCFHSMETSDFACQSF 832
Score = 480 bits (1042), Expect(4) = e-152
Identities = 207/229 (90%), Positives = 209/229 (91%)
Frame = +2 / -2
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPL MTVL R
Sbjct: 688 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL*RPPNSSS 509
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINF 988
TMTTA GNSMPQRIDKYLRA*DRDA IGITDSL APWLYRA*QRSDWILINF
Sbjct: 508 *SESPVSPTMTTASGNSMPQRIDKYLRA*DRDA*IGITDSLAAPWLYRA*QRSDWILINF 329
Query: 989 CSSFKGGK*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRY 1168
CSSFKGGK*FGLTTLNAR+YVEECSESSKM CFSVLPLLSTTEEAHLTKYFLKPSPPQRY
Sbjct: 328 CSSFKGGK*FGLTTLNARRYVEECSESSKMICFSVLPLLSTTEEAHLTKYFLKPSPPQRY 149
Query: 1169 SICDR*LWSNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMPVRT 1315
SICDR*LWSNANVTRELLGTSLDC+G*YISLPLLHIKASKSVGSMPVRT
Sbjct: 148 SICDR*LWSNANVTRELLGTSLDCDG*YISLPLLHIKASKSVGSMPVRT 2
Score = 313 bits (677), Expect(5) = e-131
Identities = 136/151 (90%), Positives = 138/151 (91%)
Frame = +1 / -1
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 689 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 510
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXX 987
VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCM+WNYR*PGGAMVIQSMTTQ*LDSH
Sbjct: 509 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMNWNYR*PGGAMVIQSMTTQ*LDSHQL 330
Query: 988 XXXXXXXXMIWINHSKCKTIC*RVFRIFKDD 1080
MIWINHSKCKTIC*RVF IFKDD
Sbjct: 329 LQLLQRRQMIWINHSKCKTIC*RVF*IFKDD 237
Score = 304 bits (659), Expect(5) = e-132
Identities = 137/153 (89%), Positives = 140/153 (91%)
Frame = -1 / +1
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCM 906
SKSSLKI+NTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQ M
Sbjct: 232 SKSSLKIQNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQFM 411
Query: 905 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRS 726
HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEV TRQSSLRVDSTLLRIGSI+S
Sbjct: 412 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVFTRQSSLRVDSTLLRIGSIQS 591
Query: 725 EGTLYRMXXXXXXXXXXXLRDSALVTSGLLCNN 627
EGTLYRM LRDSALVTSGLLCN+
Sbjct: 592 EGTLYRMLLLLIAQISLELRDSALVTSGLLCNS 690
Score = 184 bits (396), Expect(4) = e-112
Identities = 80/86 (93%), Positives = 81/86 (94%)
Frame = +3 / -3
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATLCPSE*TNTLEPEIAMH LELQIAW RHGYTEHDNAVTGFSSTFAAPSKEANDLD*P
Sbjct: 468 LATLCPSE*TNTLEPEIAMHELELQIAWRRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 289
Query: 1029 L*MQDNMLKSVPNLQR*LAFQFSPFF 1106
L*MQD+MLKSV NLQR* AF FSPFF
Sbjct: 288 L*MQDDMLKSVLNLQR*FAFLFSPFF 211
Score = 133 bits (286), Expect(5) = e-132
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = -1 / +1
Query: 1316 *YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
*YAQACS LTLMPLYAIVG IYIIH++LVMCQAIPVLHL WTITTDHI SIVGEEKV*GS
Sbjct: 1 *YAQACSLLTLMPLYAIVGVIYIIHHNLVMCQAIPVLHLHWTITTDHISSIVGEEKV*GS 180
Query: 1136 T*LS 1125
T*LS
Sbjct: 181 T*LS 192
Score = 130 bits (279), Expect(4) = e-112
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = +3 / -3
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 687 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 508
Score = 127 bits (272), Expect(5) = e-131
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = +1 / -1
Query: 1129 N*VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
N*VLP*TFSSPTIL+M*SVVMVQ KCNTGIAWHITRL*WIIYI PTIAYKGIKVSREH
Sbjct: 188 N*VLP*TFSSPTILDM*SVVMVQCKCNTGIAWHITRL*WIIYITPTIAYKGIKVSREH 15
Score = 100 bits (214), Expect(4) = e-112
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -3
Query: 1164 DTQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQSQSG 1298
DT+YVIGSYGP QM*HGNCLAHH* VMDNIY SHYCI*RHQSQ G
Sbjct: 153 DTRYVIGSYGPMQM*HGNCLAHH*IVMDNIYHSHYCI*RHQSQ*G 19
Score = 69.3 bits (145), Expect(4) = e-152
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2 / -2
Query: 545 YISVVCFFLSINNKIDCSWCHCVGIPSCC 631
++ +CFFL INNK DC+WCHCVGIPSCC
Sbjct: 769 FVLFICFFLYINNKTDCTWCHCVGIPSCC 683
Score = 57.0 bits (118), Expect(4) = e-170
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1 / +1
Query: 629 NSLVYPHNDTNCNLFCY**KERNR 558
NSLVYPHNDT CNLFCY* KERN+
Sbjct: 685 NSLVYPHNDTKCNLFCY*YKERNK 756
Score = 52.8 bits (109), Expect(5) = e-132
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2 / +2
Query: 628 TAWYTHTMTPTAIYFVINRKKETDNRN 548
TAWYTHTMTP+AI FVIN KKET+ ++
Sbjct: 686 TAWYTHTMTPSAICFVINIKKETNEQH 766
Score = 50.6 bits (104), Expect(4) = e-112
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +1 / -1
Query: 526 KLSICIVYFCCLFLSFY**QNRLQLVSLCGYTKLL 630
K+ + + LFLS Y**QNRL LVSLCGYTKLL
Sbjct: 788 KVFVSYIRVVHLFLSLY**QNRLHLVSLCGYTKLL 684
Score = 43.2 bits (88), Expect(5) = e-131
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1 / -3
Query: 517 IEWKLSICIVYFCCLFLSFY 576
IEWK S+CIVY CC F+SF+
Sbjct: 801 IEWKQSVCIVYSCCSFVSFF 742
Score = 37.7 bits (76), Expect(4) = e-170
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 573 ERKKQTTEIYDTNT*FPFY 517
ER K TT IYDTNT FPFY
Sbjct: 745 ERNK*TTRIYDTNTLFPFY 801
Score = 35.9 bits (72), Expect(5) = e-131
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -3
Query: 579 ITK*IAVGVIVWVYQAV 629
ITK IA+GVIVWVYQAV
Sbjct: 735 ITKQIALGVIVWVYQAV 685
Score = 31.8 bits (63), Expect(5) = e-132
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1 / +2
Query: 572 KERNRQQKYTIQILSFHSI 516
KE N Q +YTIQ L FHS+
Sbjct: 746 KETNEQHEYTIQTLCFHSM 802
Score = 28.6 bits (56), Expect(4) = e-170
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 527 FHSIGNVRFCLPVI 486
F GNVRFCLPVI
Sbjct: 790 FPFYGNVRFCLPVI 831
Score = 28.6 bits (56), Expect(5) = e-131
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 484 *MTGRQNRTFP 516
*MTGRQNRTFP
Sbjct: 833 *MTGRQNRTFP 801
Score = 28.6 bits (56), Expect(4) = e-152
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 483 LNDWQAKSDIS 515
+NDWQAKSD+S
Sbjct: 834 INDWQAKSDVS 802
Score = 28.1 bits (55), Expect(5) = e-132
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 516 WKCPILPASHL 484
WK PILPASHL
Sbjct: 801 WKRPILPASHL 833
Score = 23.1 bits (44), Expect(4) = e-152
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 516 NRMETKYLYRI 548
+RMETK LYRI
Sbjct: 802 HRMETKCLYRI 770
>gb|BE364125.1|BE364125 PI1_11_D07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 653
Score = 480 bits (1042), Expect(2) = e-141
Identities = 198/202 (98%), Positives = 202/202 (100%)
Frame = -3 / +1
Query: 1233 SDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHS 1054
SDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQ+IFEDSEHS
Sbjct: 1 SDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQIIFEDSEHS 180
Query: 1053 STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLS 874
STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIP+HASRSQALRYLS
Sbjct: 181 STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPIHASRSQALRYLS 360
Query: 873 IRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVAL 694
IRWGIELP+AVVIVGETGDSDYEELFGGLHKTVI+KGGFNTPANRIHTVRRYPLQDVVAL
Sbjct: 361 IRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQDVVAL 540
Query: 693 DSSNIIGIEGFSTGDIRSAMQQ 628
DSSNIIGIEGFSTGDIRSAMQQ
Sbjct: 541 DSSNIIGIEGFSTGDIRSAMQQ 606
Score = 467 bits (1014), Expect(2) = e-135
Identities = 191/201 (95%), Positives = 195/201 (97%)
Frame = -2 / +3
Query: 1231 *CAKQFPCYICVGP*LPITY*VSLGRRRFKEVLS*VGFFSSRKKGEN*KASHL*RFGTLF 1052
*CAKQFPCYIC+GP*LPITY VSLGRRRFKEVLS*VGFFSSRKKGEN KA+HL*RF TLF
Sbjct: 3 *CAKQFPCYICIGP*LPITYRVSLGRRRFKEVLS*VGFFSSRKKGENRKANHL*RFRTLF 182
Query: 1051 NILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFVY 872
NILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSN+CIAISGSKVFVY
Sbjct: 183 NILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNSCIAISGSKVFVY 362
Query: 871 SLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGCCCS* 692
SLGHRVA+CCGHCW*NW*F*LRGTVWRS QDSH *GWIQHSCE*DPY QKVPFTGCCCS*
Sbjct: 363 SLGHRVARCCGHCW*NW*F*LRGTVWRSSQDSHP*GWIQHSCE*DPYSQKVPFTGCCCS* 542
Query: 691 *LKYHWN*GIQHW*HQVCYAT 629
*LKYHWN*GIQHW*HQVCYAT
Sbjct: 543 *LKYHWN*GIQHW*HQVCYAT 605
Score = 422 bits (915), Expect(2) = e-125
Identities = 182/201 (90%), Positives = 182/201 (90%)
Frame = +2 / -1
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPL MTVL R
Sbjct: 605 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL*RPPNSSS 426
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINF 988
TMTTA GNSMPQRIDKYLRA*DRDA IGITDSLVAPWLYRA*QRSDWILINF
Sbjct: 425 *SESPVSPTMTTASGNSMPQRIDKYLRA*DRDA*IGITDSLVAPWLYRA*QRSDWILINF 246
Query: 989 CSSFKGGK*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRY 1168
CSSFKGGK*FGLTTLNARQYVEECSESSKM CFSVLPLLSTTEEAHLTKYFLKPSPPQRY
Sbjct: 245 CSSFKGGK*FGLTTLNARQYVEECSESSKMICFSVLPLLSTTEEAHLTKYFLKPSPPQRY 66
Query: 1169 SICDR*LWSNANVTRELLGTS 1231
SICDR*LWSNANVTRELLGTS
Sbjct: 65 SICDR*LWSNANVTRELLGTS 3
Score = 313 bits (677), Expect(3) = e-105
Identities = 136/151 (90%), Positives = 138/151 (91%)
Frame = +1 / -3
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 606 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 427
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXX 987
VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCM+WNYR*PGGAMVIQSMTTQ*LDSH
Sbjct: 426 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMNWNYR*PGGAMVIQSMTTQ*LDSHQL 247
Query: 988 XXXXXXXXMIWINHSKCKTIC*RVFRIFKDD 1080
MIWINHSKCKTIC*RVF IFKDD
Sbjct: 246 LQLLQRRQMIWINHSKCKTIC*RVF*IFKDD 154
Score = 304 bits (659), Expect(2) = 9e-099
Identities = 137/153 (89%), Positives = 140/153 (91%)
Frame = -1 / +2
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCM 906
SKSSLKI+NTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQ M
Sbjct: 149 SKSSLKIQNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQFM 328
Query: 905 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRS 726
HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEV TRQSSLRVDSTLLRIGSI+S
Sbjct: 329 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVFTRQSSLRVDSTLLRIGSIQS 508
Query: 725 EGTLYRMXXXXXXXXXXXLRDSALVTSGLLCNN 627
EGTLYRM LRDSALVTSGLLCN+
Sbjct: 509 EGTLYRMLLLLIAQISLELRDSALVTSGLLCNS 607
Score = 193 bits (415), Expect(4) = 2e-097
Identities = 82/86 (95%), Positives = 82/86 (95%)
Frame = +3 / -2
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATLCPSE*TNTLEPEIAMH LELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P
Sbjct: 385 LATLCPSE*TNTLEPEIAMHELELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 206
Query: 1029 L*MQDNMLKSVPNLQR*LAFQFSPFF 1106
L*MQDNMLKSV NLQR* AF FSPFF
Sbjct: 205 L*MQDNMLKSVLNLQR*FAFLFSPFF 128
Score = 130 bits (279), Expect(4) = 2e-097
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = +3 / -2
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 604 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 425
Score = 79.0 bits (166), Expect(2) = 9e-099
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = -1 / +2
Query: 1232 VMCQAIPVLHLRWTITTDHILSIVGEEKV*GST*LS 1125
VMCQAIPVLHL WTITTDHI SIVGEEKV*GST*LS
Sbjct: 2 VMCQAIPVLHLHWTITTDHISSIVGEEKV*GST*LS 109
Score = 75.8 bits (159), Expect(3) = e-105
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1 / -3
Query: 1129 N*VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHIT 1233
N*VLP*TFSSPTIL+M*SVVMVQ KCNTGIAWHIT
Sbjct: 105 N*VLP*TFSSPTILDM*SVVMVQCKCNTGIAWHIT 1
Score = 57.9 bits (120), Expect(4) = 2e-097
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3 / -2
Query: 1164 DTQYVIGSYGPTQM*HGNCLAHH 1232
DT+YVIGSYGP QM*HGNCLAHH
Sbjct: 70 DTRYVIGSYGPMQM*HGNCLAHH 2
Score = 51.0 bits (105), Expect(2) = e-125
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2 / -1
Query: 578 NNKIDCSWCHCVGIPSCC 631
NNK C+WCHCVGIPSCC
Sbjct: 653 NNKTXCTWCHCVGIPSCC 600
Score = 45.5 bits (93), Expect(2) = e-141
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / +2
Query: 629 NSLVYPHNDTNCNLFCY 579
NSLVYPHNDT CN FCY
Sbjct: 602 NSLVYPHNDTKCNXFCY 652
Score = 38.6 bits (78), Expect(2) = e-135
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / +3
Query: 628 TAWYTHTMTPTAIYFVI 578
TAWYTHTMTP+A FVI
Sbjct: 603 TAWYTHTMTPSAXCFVI 653
Score = 35.9 bits (72), Expect(3) = e-105
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -2
Query: 579 ITK*IAVGVIVWVYQAV 629
ITK IA+GVIVWVYQAV
Sbjct: 652 ITKXIALGVIVWVYQAV 602
Score = 35.4 bits (71), Expect(4) = 2e-097
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / -3
Query: 580 *QNRLQLVSLCGYTKLL 630
*QN L LVSLCGYTKLL
Sbjct: 651 *QNXLHLVSLCGYTKLL 601
>gb|BZ627054.1|BZ627054 ih50a05.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih50a05 5', DNA sequence
Length = 663
Score = 165 bits (354), Expect(7) = e-110
Identities = 64/67 (95%), Positives = 64/67 (95%)
Frame = -2 / -3
Query: 829 *NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW* 650
*NW*F*LRGTVWRS QDSH *GWIQHSCE*DPY QKVPFTGCCCS**LKYHWN*GIQHW*
Sbjct: 607 *NW*F*LRGTVWRSSQDSHP*GWIQHSCE*DPYSQKVPFTGCCCS**LKYHWN*GIQHW* 428
Query: 649 HQVCYAT 629
HQVCYAT
Sbjct: 427 HQVCYAT 407
Score = 163 bits (351), Expect(7) = e-101
Identities = 67/70 (95%), Positives = 70/70 (100%)
Frame = -3 / -1
Query: 837 IVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFS 658
++GETGDSDYEELFGGLHKTVI+KGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFS
Sbjct: 615 LLGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFS 436
Query: 657 TGDIRSAMQQ 628
TGDIRSAMQQ
Sbjct: 435 TGDIRSAMQQ 406
Score = 144 bits (310), Expect(7) = e-102
Identities = 65/68 (95%), Positives = 66/68 (97%)
Frame = +1 / +1
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 406 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 585
Query: 808 VIRITSFT 831
VIRITSFT
Sbjct: 586 VIRITSFT 609
Score = 130 bits (279), Expect(7) = 6e-088
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = +3 / +3
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 408 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 587
Score = 125 bits (268), Expect(4) = 1e-062
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2 / +2
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWR 790
CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPL MTVL R
Sbjct: 407 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL*R 568
Score = 115 bits (245), Expect(5) = 5e-074
Identities = 54/68 (79%), Positives = 56/68 (82%)
Frame = -1 / -2
Query: 830 VKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRMXXXXXXXXXXXLRDSALV 651
VKLVILITRNCLEV TRQSSLRVDSTLLRIGSI+SEGTLYRM LRDSALV
Sbjct: 608 VKLVILITRNCLEVFTRQSSLRVDSTLLRIGSIQSEGTLYRMLLLLIAQISLELRDSALV 429
Query: 650 TSGLLCNN 627
TSGLLCN+
Sbjct: 428 TSGLLCNS 405
Score = 100 bits (212), Expect(7) = e-102
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3 / +3
Query: 282 KCELCILEACLLKILPQNVFTINI*TNLFRLYSWMYPLTSSSIQR 416
KCELCILEACLLK+LPQNV TINI*TNLFRLYSWMYPLT SS+Q+
Sbjct: 63 KCELCILEACLLKMLPQNVSTINI*TNLFRLYSWMYPLTCSSLQK 197
Score = 96.8 bits (205), Expect(7) = e-110
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -2 / -3
Query: 439 PWIPHWRFLWIEELVNGYIQLYRRNKFVQMLIVKTFCGSIFSKQASNIQSSHF 281
P P W EE VNGYIQLYRRNKFV MLIV+TFCGSIFSKQASNIQSSHF
Sbjct: 220 PLDPRTGNFWSEEHVNGYIQLYRRNKFV*MLIVETFCGSIFSKQASNIQSSHF 62
Score = 95.5 bits (202), Expect(7) = 6e-088
Identities = 41/47 (87%), Positives = 41/47 (87%)
Frame = +2 / +2
Query: 281 KV*TLYIGSLFAENTSTKCFHYQHLNKFVPSVQLDVSINKLFNPKKS 421
KV* LYIGSLFAEN STKCFHYQHLNKFV SVQLDVSIN LF PK S
Sbjct: 62 KV*ALYIGSLFAENASTKCFHYQHLNKFVSSVQLDVSINMLFAPKIS 202
Score = 94.1 bits (199), Expect(7) = e-101
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = -3 / -1
Query: 420 DFFGLKSLLMDTSNCTDGTNLFKC***KHFVEVFSANKLPIYKVHTF 280
+ FG KS+LMDTS+CTD TNLFKC** KHFVE FSANKLPIYK HTF
Sbjct: 201 EIFGAKSMLMDTSSCTDETNLFKC**WKHFVEAFSANKLPIYKAHTF 61
Score = 94.1 bits (199), Expect(4) = 1e-062
Identities = 42/76 (55%), Positives = 49/76 (64%)
Frame = +1 / +1
Query: 280 ESVNFVYWKLVC*KYFHKMFSLSTFEQICSVCTVGCIH*QALQSKEISSAGSKGMSFITR 459
+SV+FVYWKLVC*K FHKMF LSTF+QIC VCT GCIH* AL+SK +
Sbjct: 61 KSVSFVYWKLVC*KCFHKMFPLSTFKQICFVCTAGCIH*HALRSKNFQCGDPRECHS*PM 240
Query: 460 AGTTTHIH*MTGRQNR 507
G T I *+ G+ R
Sbjct: 241 QGPHT*IK*LAGKIGR 288
Score = 91.8 bits (194), Expect(5) = 5e-074
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1 / -2
Query: 413 LD*RAC*WIHPTVQTEQICSNVDSENILWKYFQQTSFQYTKFTL 282
L+ RAC*WIHP VQT+QIC NVDS NILWK+FQQTSFQYTK TL
Sbjct: 194 LERRAC*WIHPAVQTKQICLNVDSGNILWKHFQQTSFQYTKLTL 63
Score = 78.5 bits (165), Expect(7) = 6e-088
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1 / +3
Query: 469 TTHIH*MTGRQNRTFPIEWKLSICIVYFCCLFLSFY 576
TTHI *MTGRQNRTFPIEWK S+CIVY CC F+SF+
Sbjct: 246 TTHID*MTGRQNRTFPIEWKQSVCIVYSCCSFVSFF 353
Score = 75.3 bits (158), Expect(7) = e-110
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -3 / -2
Query: 573 ERKKQTTEIYDTNT*FPFYWKCPILPASHLMYVCG 469
ER K TT IYDTNT FPFYWK PILPASHL+YVCG
Sbjct: 350 ERNK*TTRIYDTNTLFPFYWKRPILPASHLIYVCG 246
Score = 73.5 bits (154), Expect(5) = 5e-074
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -2 / -1
Query: 595 AIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCVW 470
++ +I RKK+ +N NIRYK+ VSILLE SDFACQSFN+CVW
Sbjct: 372 SVLLLI*RKKQMNNTNIRYKHFVSILLETSDFACQSFNLCVW 247
Score = 69.3 bits (145), Expect(7) = e-102
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2 / +2
Query: 545 YISVVCFFLSINNKIDCSWCHCVGIPSCC 631
++ +CFFL INNK DC+WCHCVGIPSCC
Sbjct: 326 FVLFICFFLYINNKTDCTWCHCVGIPSCC 412
Score = 68.4 bits (143), Expect(7) = e-101
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = -1 / -3
Query: 572 KERNRQQKYTIQILSFHSIGNVRFCLPVI*CMCVV 468
KE N Q +YTIQ L FHSIGNVRFCLPVI* MCVV
Sbjct: 349 KETNEQHEYTIQTLCFHSIGNVRFCLPVI*SMCVV 245
Score = 61.1 bits (127), Expect(7) = e-102
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3 / +2
Query: 471 HTHTLNDWQAKSDISNRMETKYLYRI 548
HTH LNDWQAKSD+SNRMETK LYRI
Sbjct: 248 HTHRLNDWQAKSDVSNRMETKCLYRI 325
Score = 57.0 bits (118), Expect(7) = e-110
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1 / -2
Query: 629 NSLVYPHNDTNCNLFCY**KERNR 558
NSLVYPHNDT CNLFCY* KERN+
Sbjct: 410 NSLVYPHNDTKCNLFCY*YKERNK 339
Score = 53.3 bits (110), Expect(7) = e-110
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -2 / -2
Query: 883 VFVYSLGHRVAKCCGHCW 830
VFVYSLGHRVA+CCGHCW
Sbjct: 662 VFVYSLGHRVARCCGHCW 609
Score = 52.8 bits (109), Expect(7) = e-101
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2 / -3
Query: 628 TAWYTHTMTPTAIYFVINRKKETDNRN 548
TAWYTHTMTP+AI FVIN KKET+ ++
Sbjct: 409 TAWYTHTMTPSAICFVINIKKETNEQH 329
Score = 50.6 bits (104), Expect(4) = 1e-062
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 526 KLSICIVYFCCLFLSFY**QNRLQLVSLCGYTKLL 630
K+ + + LFLS Y**QNRL LVSLCGYTKLL
Sbjct: 307 KVFVSYIRVVHLFLSLY**QNRLHLVSLCGYTKLL 411
Score = 46.9 bits (96), Expect(7) = e-102
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +2
Query: 832 NNDHSIWQLYAPANRQI 882
NNDHSIWQLYAPANRQI
Sbjct: 611 NNDHSIWQLYAPANRQI 661
Score = 46.0 bits (94), Expect(7) = e-101
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 884 GICLFAGA*SCQMLWSLL 831
GICLFAGA*SCQMLWSLL
Sbjct: 663 GICLFAGA*SCQMLWSLL 610
Score = 43.2 bits (88), Expect(5) = 5e-074
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -3 / -3
Query: 882 YLSIRWGIELPNAVVIVG 829
YLSIRWGIELP+AVVIVG
Sbjct: 661 YLSIRWGIELPDAVVIVG 608
Score = 41.4 bits (84), Expect(7) = e-102
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3 / +2
Query: 429 GIQGNVIHNPCRDH 470
GIQGNVIHNPCRDH
Sbjct: 209 GIQGNVIHNPCRDH 250
Score = 40.9 bits (83), Expect(7) = e-110
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / -1
Query: 469 WSLHGL*MTFPWIP 428
WSLHGL*MTFPWIP
Sbjct: 249 WSLHGL*MTFPWIP 208
Score = 40.5 bits (82), Expect(7) = 6e-088
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / +3
Query: 833 TMTTAFGNSMPQRIDKY 883
TMTTA GNSMPQRIDKY
Sbjct: 612 TMTTASGNSMPQRIDKY 662
Score = 35.9 bits (72), Expect(7) = 6e-088
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / +3
Query: 579 ITK*IAVGVIVWVYQAV 629
ITK IA+GVIVWVYQAV
Sbjct: 360 ITKQIALGVIVWVYQAV 410
Score = 35.4 bits (71), Expect(7) = 6e-088
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +1
Query: 431 DPRECHS*PVQGP 469
DPRECHS*P+QGP
Sbjct: 211 DPRECHS*PMQGP 249
Score = 33.1 bits (66), Expect(7) = e-101
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 468 GPCTGYE*HSLGS 430
GPC GYE*HSLGS
Sbjct: 248 GPCMGYE*HSLGS 210
Score = 32.7 bits (65), Expect(5) = 5e-074
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 470 VVPARVMNDIPLDP 429
VVPA VMNDIPLDP
Sbjct: 250 VVPAWVMNDIPLDP 209
Score = 29.9 bits (59), Expect(4) = 1e-062
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 849 LATLCPSE*TNT 884
LATLCPSE*TNT
Sbjct: 628 LATLCPSE*TNT 663
Score = 25.8 bits (50), Expect(7) = e-101
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 283 FPSLQCGASDYS 248
FPSLQ GA DYS
Sbjct: 62 FPSLQSGAYDYS 27
Score = 25.8 bits (50), Expect(7) = e-110
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 299 YTKFTLSIASMWSI*LQCN 243
Y T SI S WS+*LQ N
Sbjct: 78 YKAHTFSITSKWSL*LQHN 22
Score = 24.9 bits (48), Expect(7) = e-102
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 244 LHCNQMLHIEAMESVNFVY 300
L CN LH E ME V +Y
Sbjct: 23 LCCNHKLHFEVMEKV*ALY 79
Score = 22.6 bits (43), Expect(7) = 6e-088
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 245 CTVIRCSTLKRWK 283
C VI STLK WK
Sbjct: 24 CAVIISSTLK*WK 62
>gb|CL704122.2|CL704122 SP__Bb0010P10.f SP__Bb Sorghum propinquum genomic clone
SP__Bb0010P10 5', DNA sequence
Length = 747
Score = 209 bits (451), Expect(5) = e-103
Identities = 79/85 (92%), Positives = 80/85 (94%)
Frame = -2 / -1
Query: 883 VFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGC 704
VFVYSLGHRVA+CCGHCW*NW*F LRGTVWRS QDSH *GWIQHSCE*DPY QKVP TGC
Sbjct: 570 VFVYSLGHRVARCCGHCW*NW*FRLRGTVWRSSQDSHP*GWIQHSCE*DPYSQKVPSTGC 391
Query: 703 CCS**LKYHWN*GIQHW*HQVCYAT 629
CCS**LKYHWN*GIQHW*HQVCYAT
Sbjct: 390 CCS**LKYHWN*GIQHW*HQVCYAT 316
Score = 200 bits (431), Expect(5) = 1e-093
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = -3 / -2
Query: 885 RYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQD 706
RYLSIRWGIELP+AVVIVGETGDSDYEELFGGLHKTVI+KGGFNTPANRIHTVRRYPLQD
Sbjct: 572 RYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQD 393
Query: 705 VVALDSSNIIGIEGFSTGDIRSAMQQ 628
V ALDSSNIIGIEGFSTGDIRSAMQQ
Sbjct: 392 VAALDSSNIIGIEGFSTGDIRSAMQQ 315
Score = 186 bits (401), Expect(5) = 3e-096
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = +1 / +3
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKS+NIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 315 LLHSRPDVTSAESLNSNDI*AIKSSNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 494
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP 885
VI ITSFTNNDHSIWQLYAPANRQIP
Sbjct: 495 VIGITSFTNNDHSIWQLYAPANRQIP 572
Score = 155 bits (332), Expect(4) = 1e-071
Identities = 71/86 (82%), Positives = 73/86 (84%)
Frame = -1 / -3
Query: 884 GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRM 705
GICLFAGA*SCQMLWSLLVKLVI ITRNCLEV TRQSSLRVDSTLLRIGSI+SEGTLYRM
Sbjct: 571 GICLFAGA*SCQMLWSLLVKLVIPITRNCLEVFTRQSSLRVDSTLLRIGSIQSEGTLYRM 392
Query: 704 XXXXXXXXXXXLRDSALVTSGLLCNN 627
LRDSALVTSGLLCN+
Sbjct: 391 LLLLIAQISLELRDSALVTSGLLCNS 314
Score = 154 bits (331), Expect(5) = 4e-084
Identities = 67/86 (77%), Positives = 68/86 (79%)
Frame = +2 / +1
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CCIADLMSPVLNPSIPMIFELSRA TSC+GYLLTVWILFAGVLNPPL MTVL R
Sbjct: 316 CCIADLMSPVLNPSIPMIFELSRAATSCRGYLLTVWILFAGVLNPPLRMTVL*RPPNSSS 495
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYL 886
TMTTA GNSMPQRIDKYL
Sbjct: 496 *SESPVSPTMTTASGNSMPQRIDKYL 573
Score = 128 bits (275), Expect(5) = 3e-055
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = +3 / +2
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPV+GTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 317 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVEGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 496
Score = 78.0 bits (164), Expect(5) = 3e-096
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1 / +2
Query: 469 TTHIH*MTGRQNRTFPIEWKLSICIVYFCCLFLSFY 576
TTHI *MTGRQNRTFPI+WK S+CIVY CC FLSF+
Sbjct: 155 TTHID*MTGRQNRTFPIKWKRSVCIVYSCCSFLSFF 262
Score = 77.6 bits (163), Expect(5) = e-103
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -3 / -3
Query: 573 ERKKQTTEIYDTNT*FPFYWKCPILPASHLMYVCG 469
ERKK TT IYDTNT FPFYWK PILPASHL+YVCG
Sbjct: 259 ERKK*TTRIYDTNTSFPFYWKRPILPASHLIYVCG 155
Score = 77.6 bits (163), Expect(5) = 3e-096
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = +2 / +1
Query: 311 FAENTSTKCFHYQHLNKFVPSVQLDVSINKLFNPKKS 421
FAEN STKCFHYQHLNKFV SVQLDVSIN LF PK S
Sbjct: 1 FAENASTKCFHYQHLNKFVSSVQLDVSINMLFAPKIS 111
Score = 74.8 bits (157), Expect(4) = 1e-071
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = -2 / -2
Query: 595 AIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCVW 470
++ +I RKKE +N NIRYK+ VSILLE SDFACQSFN+CVW
Sbjct: 281 SVLLLI*RKKEMNNTNIRYKHFVSILLETSDFACQSFNLCVW 156
Score = 73.5 bits (154), Expect(5) = 4e-084
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +3 / +2
Query: 312 LLKILPQNVFTINI*TNLFRLYSWMYPLTSSSIQR 416
LLK+LPQNV TINI*TNLFRLYSWMYPLT SS+Q+
Sbjct: 2 LLKMLPQNVSTINI*TNLFRLYSWMYPLTCSSLQK 106
Score = 73.0 bits (153), Expect(5) = e-103
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2 / -1
Query: 412 WIEELVNGYIQLYRRNKFVQMLIVKTFCGSIFSK 311
W EE VNGYIQLYRRNKFV MLIV+TFCGSIFSK
Sbjct: 102 WSEEHVNGYIQLYRRNKFV*MLIVETFCGSIFSK 1
Score = 70.7 bits (148), Expect(5) = 1e-093
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -1 / -3
Query: 413 LD*RAC*WIHPTVQTEQICSNVDSENILWKYFQQ 312
L+ RAC*WIHP VQT+QIC NVDS NILWK+FQQ
Sbjct: 103 LERRAC*WIHPAVQTKQICLNVDSGNILWKHFQQ 2
Score = 68.4 bits (143), Expect(5) = 1e-093
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = -1 / -1
Query: 572 KERNRQQKYTIQILSFHSIGNVRFCLPVI*CMCVV 468
KERN Q +YTIQ L FH IGNVRFCLPVI* MCVV
Sbjct: 258 KERNEQHEYTIQTLRFHFIGNVRFCLPVI*SMCVV 154
Score = 68.0 bits (142), Expect(4) = 1e-071
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -3 / -2
Query: 420 DFFGLKSLLMDTSNCTDGTNLFKC***KHFVEVFSA 313
+ FG KS+LMDTS+CTD TNLFKC** KHFVE FSA
Sbjct: 110 EIFGAKSMLMDTSSCTDETNLFKC**WKHFVEAFSA 3
Score = 65.2 bits (136), Expect(5) = 3e-055
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2 / +3
Query: 470 PHTYIK*LAGKIGHFQ*NGN*VFVSYISVVCFFLSI 577
PHT IK*LAGKIG FQ*NGN VFVSYI VV FFLS+
Sbjct: 156 PHT*IK*LAGKIGRFQ*NGNEVFVSYIRVVHFFLSL 263
Score = 64.8 bits (135), Expect(5) = 4e-084
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2 / +1
Query: 545 YISVVCFFLSINNKIDCSWCHCVGIPSCC 631
++ + FFL INNK DC+WCHCVGIPSCC
Sbjct: 235 FVLFISFFLYINNKTDCTWCHCVGIPSCC 321
Score = 59.7 bits (124), Expect(5) = 4e-084
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3 / +1
Query: 471 HTHTLNDWQAKSDISNRMETKYLYRI 548
HTH LNDWQAKSD+SN+METK LYRI
Sbjct: 157 HTHRLNDWQAKSDVSNKMETKCLYRI 234
Score = 54.2 bits (112), Expect(5) = e-103
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 629 NSLVYPHNDTNCNLFCY**KERNR 558
NSLVYPHNDT CNLFCY* KER +
Sbjct: 319 NSLVYPHNDTKCNLFCY*YKERKK 248
Score = 50.1 bits (103), Expect(5) = 1e-093
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -2 / -1
Query: 628 TAWYTHTMTPTAIYFVINRKKETDNRN 548
TAWYTHTMTP+AI FVIN KKE + ++
Sbjct: 318 TAWYTHTMTPSAICFVINIKKERNEQH 238
Score = 48.3 bits (99), Expect(5) = 3e-096
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 562 FLSFY**QNRLQLVSLCGYTKLL 630
FLS Y**QNRL LVSLCGYTKLL
Sbjct: 252 FLSLY**QNRLHLVSLCGYTKLL 320
Score = 41.4 bits (84), Expect(5) = 3e-096
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3 / +1
Query: 429 GIQGNVIHNPCRDH 470
GIQGNVIHNPCRDH
Sbjct: 118 GIQGNVIHNPCRDH 159
Score = 40.9 bits (83), Expect(5) = e-103
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / -2
Query: 469 WSLHGL*MTFPWIP 428
WSLHGL*MTFPWIP
Sbjct: 158 WSLHGL*MTFPWIP 117
Score = 38.2 bits (77), Expect(5) = 4e-084
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 413 KKSPVRDPRECHS*PVQGP 469
K RDPRECHS*P+QGP
Sbjct: 102 KNFQCRDPRECHS*PMQGP 158
Score = 35.9 bits (72), Expect(5) = 3e-055
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 579 ITK*IAVGVIVWVYQAV 629
ITK IA+GVIVWVYQAV
Sbjct: 269 ITKQIALGVIVWVYQAV 319
Score = 33.1 bits (66), Expect(5) = 1e-093
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 468 GPCTGYE*HSLGS 430
GPC GYE*HSLGS
Sbjct: 157 GPCMGYE*HSLGS 119
Score = 32.7 bits (65), Expect(4) = 1e-071
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 470 VVPARVMNDIPLDP 429
VVPA VMNDIPLDP
Sbjct: 159 VVPAWVMNDIPLDP 118
Score = 32.7 bits (65), Expect(5) = 3e-055
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 430 GSKGMSFITRAGTT 471
GSKGMSFIT AGTT
Sbjct: 119 GSKGMSFITHAGTT 160
Score = 29.9 bits (59), Expect(5) = 3e-055
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 849 LATLCPSE*TNT 884
LATLCPSE*TNT
Sbjct: 536 LATLCPSE*TNT 571
>gb|BG050643.1|BG050643 FM1_70_H01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 461
Score = 342 bits (742), Expect(2) = 3e-097
Identities = 136/142 (95%), Positives = 138/142 (97%)
Frame = -2 / +1
Query: 1054 FNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFV 875
FNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSN+CIAISGSKVFV
Sbjct: 1 FNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNSCIAISGSKVFV 180
Query: 874 YSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGCCCS 695
YSLGHRVA+CCGHCW*NW*F LRGTVWRS QDSH *GWIQHSCE*DPY QKVPFTGCCCS
Sbjct: 181 YSLGHRVARCCGHCW*NW*FRLRGTVWRSSQDSHP*GWIQHSCE*DPYSQKVPFTGCCCS 360
Query: 694 **LKYHWN*GIQHW*HQVCYAT 629
**LKYHWN*GIQHW*HQVCYAT
Sbjct: 361 **LKYHWN*GIQHW*HQVCYAT 426
Score = 334 bits (724), Expect(2) = 4e-094
Identities = 139/142 (97%), Positives = 142/142 (100%)
Frame = -3 / +2
Query: 1053 STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLS 874
STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIP+HASRSQALRYLS
Sbjct: 2 STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPIHASRSQALRYLS 181
Query: 873 IRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVAL 694
IRWGIELP+AVVIVGETGDSDYEELFGGLHKTVI+KGGFNTPANRIHTVRRYPLQDVVAL
Sbjct: 182 IRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQDVVAL 361
Query: 693 DSSNIIGIEGFSTGDIRSAMQQ 628
DSSNIIGIEGFSTGDIRSAMQQ
Sbjct: 362 DSSNIIGIEGFSTGDIRSAMQQ 427
Score = 292 bits (632), Expect(2) = 1e-084
Identities = 127/142 (89%), Positives = 129/142 (90%)
Frame = +1 / -2
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 427 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 248
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXX 987
VI ITSFTNNDHSIWQLYAPANRQIP*SLRSRCM+WNYR*PGGAMVIQSMTTQ*LDSH
Sbjct: 247 VIGITSFTNNDHSIWQLYAPANRQIP*SLRSRCMNWNYR*PGGAMVIQSMTTQ*LDSHQL 68
Query: 988 XXXXXXXXMIWINHSKCKTIC* 1053
MIWINHSKCKTIC*
Sbjct: 67 LQLLQRRQMIWINHSKCKTIC* 2
Score = 283 bits (613), Expect(2) = 4e-078
Identities = 124/142 (87%), Positives = 124/142 (87%)
Frame = +2 / -3
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPL MTVL R
Sbjct: 426 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL*RPPNSSS 247
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINF 988
TMTTA GNSMPQRIDKYLRA*DRDA IGITDSLVAPWLYRA*QRSDWILINF
Sbjct: 246 *SESPVSPTMTTASGNSMPQRIDKYLRA*DRDA*IGITDSLVAPWLYRA*QRSDWILINF 67
Query: 989 CSSFKGGK*FGLTTLNARQYVE 1054
CSSFKGGK*FGLTTLNARQYVE
Sbjct: 66 CSSFKGGK*FGLTTLNARQYVE 1
Score = 280 bits (606), Expect = 4e-074
Identities = 126/142 (88%), Positives = 128/142 (90%)
Frame = -1 / +3
Query: 1052 QHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLRL*GICL 873
QHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQ MHRDLRL*GICL
Sbjct: 3 QHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQFMHRDLRL*GICL 182
Query: 872 FAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRMXXXX 693
FAGA*SCQMLWSLLVKLVI ITRNCLEV TRQSSLRVDSTLLRIGSI+SEGTLYRM
Sbjct: 183 FAGA*SCQMLWSLLVKLVIPITRNCLEVFTRQSSLRVDSTLLRIGSIQSEGTLYRMLLLL 362
Query: 692 XXXXXXXLRDSALVTSGLLCNN 627
LRDSALVTSGLLCN+
Sbjct: 363 IAQISLELRDSALVTSGLLCNS 428
Score = 161 bits (347), Expect(3) = 7e-075
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3 / -1
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATLCPSE*TNTLEPEIAMH LELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P
Sbjct: 206 LATLCPSE*TNTLEPEIAMHELELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 27
Query: 1029 L*MQDNML 1052
L*MQDNML
Sbjct: 26 L*MQDNML 3
Score = 130 bits (279), Expect(3) = 7e-075
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = +3 / -1
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 425 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 246
Score = 44.1 bits (90), Expect(2) = 1e-084
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -3
Query: 593 CSWCHCVGIPSCC 631
C+WCHCVGIPSCC
Sbjct: 459 CTWCHCVGIPSCC 421
Score = 35.9 bits (72), Expect(2) = 3e-097
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 629 NSLVYPHNDTNCN 591
NSLVYPHNDT CN
Sbjct: 423 NSLVYPHNDTKCN 461
Score = 33.6 bits (67), Expect(2) = 4e-094
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +1
Query: 628 TAWYTHTMTPTA 593
TAWYTHTMTP+A
Sbjct: 424 TAWYTHTMTPSA 459
Score = 31.3 bits (62), Expect(2) = 4e-078
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / -1
Query: 591 IAVGVIVWVYQAV 629
IA+GVIVWVYQAV
Sbjct: 461 IALGVIVWVYQAV 423
Score = 30.4 bits (60), Expect(3) = 7e-075
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 592 LQLVSLCGYTKLL 630
L LVSLCGYTKLL
Sbjct: 460 LHLVSLCGYTKLL 422
>gb|CW276652.1|CW276652 104_750_11405606_116_35397_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405606, DNA
sequence
Length = 704
Score = 215 bits (464), Expect(5) = 6e-093
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -2 / +1
Query: 883 VFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGC 704
VFVYSLGHRVA+CCGHCW*NW*F*LRGTVWRS QDSH *GWIQHSCE*DPY QKVPFTGC
Sbjct: 196 VFVYSLGHRVARCCGHCW*NW*F*LRGTVWRSSQDSHP*GWIQHSCE*DPYSQKVPFTGC 375
Query: 703 CCS**LKYHWN*GIQHW*HQVCYAT 629
CCS**LKYHWN*GIQHW*HQVCYAT
Sbjct: 376 CCS**LKYHWN*GIQHW*HQVCYAT 450
Score = 202 bits (435), Expect(5) = 3e-083
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = -3 / +2
Query: 885 RYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQD 706
RYLSIRWGIELP+AVVIVGETGDSDYEELFGGLHKTVI+KGGFNTPANRIHTVRRYPLQD
Sbjct: 194 RYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQD 373
Query: 705 VVALDSSNIIGIEGFSTGDIRSAMQQ 628
VVALDSSNIIGIEGFSTGDIRSAMQQ
Sbjct: 374 VVALDSSNIIGIEGFSTGDIRSAMQQ 451
Score = 192 bits (413), Expect(5) = 1e-086
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +1 / -2
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 451 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 272
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP 885
VIRITSFTNNDHSIWQLYAPANRQIP
Sbjct: 271 VIRITSFTNNDHSIWQLYAPANRQIP 194
Score = 158 bits (339), Expect(5) = 3e-068
Identities = 69/86 (80%), Positives = 69/86 (80%)
Frame = +2 / -3
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPL MTVL R
Sbjct: 450 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL*RPPNSSS 271
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYL 886
TMTTA GNSMPQRIDKYL
Sbjct: 270 *SESPVSPTMTTASGNSMPQRIDKYL 193
Score = 158 bits (339), Expect(4) = 4e-061
Identities = 72/86 (83%), Positives = 74/86 (86%)
Frame = -1 / +3
Query: 884 GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRM 705
GICLFAGA*SCQMLWSLLVKLVILITRNCLEV TRQSSLRVDSTLLRIGSI+SEGTLYRM
Sbjct: 195 GICLFAGA*SCQMLWSLLVKLVILITRNCLEVFTRQSSLRVDSTLLRIGSIQSEGTLYRM 374
Query: 704 XXXXXXXXXXXLRDSALVTSGLLCNN 627
LRDSALVTSGLLCN+
Sbjct: 375 LLLLIAQISLELRDSALVTSGLLCNS 452
Score = 130 bits (279), Expect(4) = 1e-049
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = +3 / -1
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 449 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 270
Score = 78.5 bits (165), Expect(5) = 3e-068
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1 / -1
Query: 469 TTHIH*MTGRQNRTFPIEWKLSICIVYFCCLFLSFY 576
TTHI *MTGRQNRTFPIEWK S+CIVY CC F+SF+
Sbjct: 611 TTHID*MTGRQNRTFPIEWKQSVCIVYSCCSFVSFF 504
Score = 75.3 bits (158), Expect(5) = 6e-093
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -3 / +3
Query: 573 ERKKQTTEIYDTNT*FPFYWKCPILPASHLMYVCG 469
ER K TT IYDTNT FPFYWK PILPASHL+YVCG
Sbjct: 507 ERNK*TTRIYDTNTLFPFYWKRPILPASHLIYVCG 611
Score = 73.5 bits (154), Expect(4) = 4e-061
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -2 / +2
Query: 595 AIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCVW 470
++ +I RKK+ +N NIRYK+ VSILLE SDFACQSFN+CVW
Sbjct: 485 SVLLLI*RKKQMNNTNIRYKHFVSILLETSDFACQSFNLCVW 610
Score = 69.3 bits (145), Expect(5) = 1e-086
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2 / -3
Query: 545 YISVVCFFLSINNKIDCSWCHCVGIPSCC 631
++ +CFFL INNK DC+WCHCVGIPSCC
Sbjct: 531 FVLFICFFLYINNKTDCTWCHCVGIPSCC 445
Score = 68.4 bits (143), Expect(5) = 3e-083
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = -1 / +1
Query: 572 KERNRQQKYTIQILSFHSIGNVRFCLPVI*CMCVV 468
KE N Q +YTIQ L FHSIGNVRFCLPVI* MCVV
Sbjct: 508 KETNEQHEYTIQTLCFHSIGNVRFCLPVI*SMCVV 612
Score = 62.5 bits (130), Expect(4) = 1e-049
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2 / -2
Query: 470 PHTYIK*LAGKIGHFQ*NGN*VFVSYISVVCFFLSI 577
PHT IK*LAGKIG FQ*NGN VFVSYI VV FLS+
Sbjct: 610 PHT*IK*LAGKIGRFQ*NGNKVFVSYIRVVHLFLSL 503
Score = 61.1 bits (127), Expect(5) = 1e-086
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3 / -3
Query: 471 HTHTLNDWQAKSDISNRMETKYLYRI 548
HTH LNDWQAKSD+SNRMETK LYRI
Sbjct: 609 HTHRLNDWQAKSDVSNRMETKCLYRI 532
Score = 57.0 bits (118), Expect(5) = 6e-093
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1 / +3
Query: 629 NSLVYPHNDTNCNLFCY**KERNR 558
NSLVYPHNDT CNLFCY* KERN+
Sbjct: 447 NSLVYPHNDTKCNLFCY*YKERNK 518
Score = 52.8 bits (109), Expect(5) = 3e-083
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2 / +1
Query: 628 TAWYTHTMTPTAIYFVINRKKETDNRN 548
TAWYTHTMTP+AI FVIN KKET+ ++
Sbjct: 448 TAWYTHTMTPSAICFVINIKKETNEQH 528
Score = 41.4 bits (84), Expect(5) = 1e-086
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3 / -3
Query: 429 GIQGNVIHNPCRDH 470
GIQGNVIHNPCRDH
Sbjct: 648 GIQGNVIHNPCRDH 607
Score = 40.9 bits (83), Expect(5) = 6e-093
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +2
Query: 469 WSLHGL*MTFPWIP 428
WSLHGL*MTFPWIP
Sbjct: 608 WSLHGL*MTFPWIP 649
Score = 35.9 bits (72), Expect(5) = 3e-068
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 579 ITK*IAVGVIVWVYQAV 629
ITK IA+GVIVWVYQAV
Sbjct: 497 ITKQIALGVIVWVYQAV 447
Score = 35.4 bits (71), Expect(5) = 3e-068
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -2
Query: 431 DPRECHS*PVQGP 469
DPRECHS*P+QGP
Sbjct: 646 DPRECHS*PMQGP 608
Score = 35.0 bits (70), Expect(5) = 1e-086
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / -1
Query: 372 LYSWMYPLTSSSIQR 416
LYSWMYPLT SS+Q+
Sbjct: 704 LYSWMYPLTCSSLQK 660
Score = 33.1 bits (66), Expect(5) = 3e-083
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / +3
Query: 468 GPCTGYE*HSLGS 430
GPC GYE*HSLGS
Sbjct: 609 GPCMGYE*HSLGS 647
Score = 32.7 bits (65), Expect(4) = 4e-061
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 470 VVPARVMNDIPLDP 429
VVPA VMNDIPLDP
Sbjct: 607 VVPAWVMNDIPLDP 648
Score = 32.7 bits (65), Expect(4) = 1e-049
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / -1
Query: 430 GSKGMSFITRAGTT 471
GSKGMSFIT AGTT
Sbjct: 647 GSKGMSFITHAGTT 606
Score = 31.8 bits (63), Expect(5) = 6e-093
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 420 DFFGLKSLLMDTSNCT 373
+ FG KS+LMDTS+CT
Sbjct: 656 EIFGAKSMLMDTSSCT 703
Score = 30.9 bits (61), Expect(5) = 3e-083
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +1
Query: 439 PWIPHWRFLWIEELVNGYIQLY 374
P P W EE VNGYIQLY
Sbjct: 637 PLDPRTGNFWSEEHVNGYIQLY 702
Score = 30.4 bits (60), Expect(4) = 4e-061
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 413 LD*RAC*WIHPTVQ 372
L+ RAC*WIHP VQ
Sbjct: 663 LERRAC*WIHPAVQ 704
Score = 29.9 bits (59), Expect(4) = 1e-049
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 849 LATLCPSE*TNT 884
LATLCPSE*TNT
Sbjct: 230 LATLCPSE*TNT 195
Score = 29.0 bits (57), Expect(5) = 3e-068
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 374 VQLDVSINKLFNPKKS 421
VQLDVSIN LF PK S
Sbjct: 702 VQLDVSINMLFAPKIS 655
>gb|BG050804.1|BG050804 FM1_70_H01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 438
Score = 330 bits (714), Expect = 6e-089
Identities = 136/143 (95%), Positives = 138/143 (96%)
Frame = -3 / +3
Query: 1593 IHQFSWPEHCKNYLSRISSLGPRHPAFACKEDHKVPVKCRKHISIIAVDSVKKEDLIQII 1414
IHQFSWPEHCKNYLSRI +LGPRHPAFACKED KVPVKCRKHI +IAVDSV KEDLIQII
Sbjct: 9 IHQFSWPEHCKNYLSRILTLGPRHPAFACKEDQKVPVKCRKHIFVIAVDSVNKEDLIQII 188
Query: 1413 RNSVEATRTGTMSGSTGFVLSTSLTIAELQSVIVRTGMLPTDFDAFICNSGSDIYYPLQS 1234
RNSVEATRTGTMSGSTGFVLSTSLTIAELQSVIVRTGMLPTDFDAFICNSGSDIYYP QS
Sbjct: 189 RNSVEATRTGTMSGSTGFVLSTSLTIAELQSVIVRTGMLPTDFDAFICNSGSDIYYPSQS 368
Query: 1233 SDVPSNSRVTFALDHNYRSHIEY 1165
SDVPSNSRVTFALDHNYRSHIEY
Sbjct: 369 SDVPSNSRVTFALDHNYRSHIEY 437
Score = 319 bits (691), Expect = 8e-086
Identities = 134/143 (93%), Positives = 140/143 (97%)
Frame = +2 / -3
Query: 1166 YSICDR*LWSNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMPVRTITDCSSAIVS 1345
YSICDR*LWSNANVTRELLGTSLDC+G*YISLPLLHIKASKSVGSMPVRTITDCSSAIVS
Sbjct: 436 YSICDR*LWSNANVTRELLGTSLDCDG*YISLPLLHIKASKSVGSMPVRTITDCSSAIVS 257
Query: 1346 EVDSTKPVEPDIVPVRVASTEFLII*IKSSFLTESTAMIDICFLHFTGTLWSSLHAKAGC 1525
EVD+TKPVEPDIVPVRVASTEFLII*IKSS LTESTA+ +ICFLHFTGT WSSLHAKAGC
Sbjct: 256 EVDNTKPVEPDIVPVRVASTEFLII*IKSSLLTESTAITNICFLHFTGTFWSSLHAKAGC 77
Query: 1526 LGPRLDILDK*FLQCSGQENWCI 1594
LGPR++ILDK*FLQCSGQENWCI
Sbjct: 76 LGPRVNILDK*FLQCSGQENWCI 8
Score = 306 bits (663), Expect = 6e-082
Identities = 126/140 (90%), Positives = 131/140 (93%)
Frame = -2 / +2
Query: 1591 TPIFLA*TLQELLVKDIKSWSKTSCFRMQRRPQGACEVQEAYIYHCCRLC*KGRFNSNYQ 1412
TPIFLA*TLQELLVKDI S SKTSCFRMQRRP+GACEVQEAYI +CCRL *+GRFNSNYQ
Sbjct: 11 TPIFLA*TLQELLVKDINSGSKTSCFRMQRRPEGACEVQEAYICYCCRLR*QGRFNSNYQ 190
Query: 1411 KLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNSTHRHAPD*L*CLYMQ*WERYILSITV* 1232
K C*G+THWNYVRFYRFC V FTDNSRATVCNSTHRHAP *L*CLYMQ*WE YILSITV*
Sbjct: 191 KFC*GHTHWNYVRFYRFCVVDFTDNSRATVCNSTHRHAPY*L*CLYMQ*WE*YILSITV* 370
Query: 1231 *CAKQFPCYICVGP*LPITY 1172
*CAKQFPCYIC+GP*LPITY
Sbjct: 371 *CAKQFPCYICIGP*LPITY 430
Score = 254 bits (549), Expect = 3e-066
Identities = 115/143 (80%), Positives = 119/143 (83%)
Frame = +3 / -1
Query: 1164 DTQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQSQSGXXXXXXXXXXXXXXS 1343
DT+YVIGSYGP QM*HGNCLAHH*TVMDNIY SHYCI*RHQSQ G S
Sbjct: 438 DTRYVIGSYGPMQM*HGNCLAHH*TVMDNIYHSHYCI*RHQSQ*GACLCVLLQTVALLLS 259
Query: 1344 VK*TAQNL*NLT*FQCV*PQQSF**FELNLPF*QSLQQ**IYASCTSQAPCGLLCMRKQD 1523
VK T QNL*NLT*FQCV PQQ+F**FELNLP *+SLQQ* IYASCTSQAP GLLCMRKQD
Sbjct: 258 VKSTTQNL*NLT*FQCVWPQQNF**FELNLPC*RSLQQ*QIYASCTSQAPSGLLCMRKQD 79
Query: 1524 VLDQDLISLTSNSCNVQAKKIGV 1592
VLD +LISLTSNSCNVQAKKIGV
Sbjct: 78 VLDPELISLTSNSCNVQAKKIGV 10
Score = 181 bits (389), Expect(2) = 8e-069
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = +1 / -2
Query: 1342 Q*SRQHKTCRT*HSSSACSLNRVSDNLN*IFLFNRVYSNDRYMLPALHRHLVVFFACESR 1521
Q*SRQHKTCRT*HSSSAC LNR+SDNLN*IFL N VYSN++YMLPALHRHL+VFFACESR
Sbjct: 260 Q*SRQHKTCRT*HSSSACGLNRISDNLN*IFLVNGVYSNNKYMLPALHRHLLVFFACESR 81
Query: 1522 MSWTKT*YP*QVILAMFRPRKLVY 1593
MSWT++*YP*QVILAMFRPRKLVY
Sbjct: 80 MSWTQS*YP*QVILAMFRPRKLVY 9
Score = 130 bits (278), Expect(2) = 1e-058
Identities = 61/70 (87%), Positives = 62/70 (88%)
Frame = -1 / +1
Query: 1592 YTNFLGLNIARITCQGYQVLVQDILLSHAKKTTRCL*SAGSIYLSLL*TLLKRKI*FKLS 1413
YTNFLGLNIARITCQGY + VQDILLSHAKKT RCL*SAGSIYL LL*T L RKI*FKLS
Sbjct: 10 YTNFLGLNIARITCQGY*LWVQDILLSHAKKTRRCL*SAGSIYLLLL*TPLTRKI*FKLS 189
Query: 1412 ETLLRLHALE 1383
E LLR HALE
Sbjct: 190 EILLRPHALE 219
Score = 119 bits (255), Expect(2) = 1e-058
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -1 / +1
Query: 1331 SYSL**YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSI 1164
SYSL**YAQACS LTLMPLYAIVG IYIIH+SLVMCQAIPVLHL WTITTDHI SI
Sbjct: 271 SYSL**YAQACSLLTLMPLYAIVGVIYIIHHSLVMCQAIPVLHLHWTITTDHISSI 438
Score = 102 bits (218), Expect(2) = 8e-069
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +1 / -2
Query: 1165 ILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
IL+M*SVVMVQ KCNTGIAWHITRL*WIIYI PTIAYKGIKVSREH
Sbjct: 437 ILDM*SVVMVQCKCNTGIAWHITRL*WIIYITPTIAYKGIKVSREH 300
>gb|CX614951.1|CX614951 GABR1_17_F12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_F12_A002 3', mRNA sequence
Length = 740
Score = 250 bits (540), Expect(3) = 9e-084
Identities = 100/126 (79%), Positives = 116/126 (92%)
Frame = -3 / +2
Query: 1005 PLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGE 826
P EL+KLMRIQSLRC+ALYNH ATRLSV+P+HASRSQALRYL IRWGIE+PN V+VGE
Sbjct: 80 PNHELRKLMRIQSLRCNALYNHSATRLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGE 259
Query: 825 TGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDI 646
+GDSDYEEL GGLH+T+I+KG FN PANRIHTVRRYPLQDVVALDSSNIIG+EG++T D+
Sbjct: 260 SGDSDYEELLGGLHRTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDL 439
Query: 645 RSAMQQ 628
+SA+QQ
Sbjct: 440 KSALQQ 457
Score = 180 bits (388), Expect(4) = 2e-056
Identities = 79/123 (64%), Positives = 86/123 (69%)
Frame = +2 / -3
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 456 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWRPPSSSS 277
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINF 988
T T FG S+PQRI KYLRA*D DA IG TD+LVA WLY A QR DWILINF
Sbjct: 276 *SESPLSPTRTATFGTSIPQRIHKYLRA*DLDAWIGTTDNLVALWLYNALQRRDWILINF 97
Query: 989 CSS 997
+S
Sbjct: 96 LNS 88
Score = 131 bits (280), Expect(2) = 1e-035
Identities = 61/134 (45%), Positives = 80/134 (59%)
Frame = -2 / +1
Query: 988 KVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*L 809
+VDENP++ L C V*P R+Q IC+ I ISGSKV VY+LG R AKCC C * F L
Sbjct: 97 EVDENPISPLQCIV*PQRYQIICSPYPRIKISGSKVLVYTLGDRGAKCCSPCG*KRRFRL 276
Query: 808 RGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYAT 629
RGT SP D + G +QH + DP+G+++PF GCC LK+H G+ H * +VC A
Sbjct: 277 RGTAGGSP*DHYPEGRVQHPRKQDPHGEEIPFAGCCRPRQLKHHRCRGLHHG*PEVCPAA 456
Query: 628 TAWYTHTMTPTAIY 587
+ P ++
Sbjct: 457 DGYTHTITPPELLF 498
Score = 121 bits (259), Expect(2) = 1e-032
Identities = 57/118 (48%), Positives = 79/118 (66%)
Frame = +1 / -2
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LL R V +L+++D+*A++ +NIL RV R+DP+ VE L D+ +ET +QFL
Sbjct: 457 LLQGRLQVIRGVALDTDDV*AVEGDNILQRVSPHRVDPVCGDVELALQDNGPMETPQQFL 278
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSH 981
VI I +FT+ D +IW LY P Q+P*SLRS C+ +YR* G A+VIQ + T+ LDSH
Sbjct: 277 VI*IAAFTHKDCNIWHLYPPTYTQVP*SLRS*CVDRDYR*SGSAVVIQCIATERLDSH 104
Score = 97.7 bits (207), Expect(2) = 1e-024
Identities = 56/119 (47%), Positives = 64/119 (53%)
Frame = -1 / +3
Query: 986 S**ESSHCVVMLCITMAPPGYL*FQCMHRDLRL*GICLFAGA*SCQMLWSLLVKLVILIT 807
S**ES+ V M CIT A P YL* H+DLRL*G C++ G * CQML SL VK I IT
Sbjct: 99 S**ESNLSVAMHCITTALPDYL*SLSTHQDLRL*GTCVYVGG*RCQMLQSLWVKAAIQIT 278
Query: 806 RNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRMXXXXXXXXXXXLRDSALVTSGLLCN 630
RNC VS S R ST + GS R TL RM R + +T L C+
Sbjct: 279 RNCWGVSIGPLS*RASSTSPQTGSTR*GDTLCRMLSPSTAQTSSVSRATPRMT*SLPCS 455
Score = 88.1 bits (186), Expect(2) = 1e-021
Identities = 52/116 (44%), Positives = 59/116 (50%)
Frame = +3 / -1
Query: 639 QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPRXXX 818
QT H P+ +* LS + +QHP KG P GS + C* P * S GD VPR
Sbjct: 446 QTSGHPWCSPRHR*CLSCRGRQHPAKGISSPCGSCLRGC*TRPSG*WSYGDPPAVPRNLN 267
Query: 819 XXXXXXXXXXLATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSST 986
LA L P+ T+TLEPEI M LQI W R GYT H N GFSST
Sbjct: 266 RRFHPQGLQHLAPLSPNVYTSTLEPEILMRG*GLQIIW*RCGYTMHCNGEIGFSST 99
Score = 65.2 bits (136), Expect(3) = 9e-084
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -3 / +2
Query: 1098 GRTEKQVIFEDSEHSSTYCLAFRVVNPNH 1012
GRTE+Q+I ED EHSS YCLAFRVVNPNH
Sbjct: 2 GRTERQIILEDPEHSSAYCLAFRVVNPNH 88
Score = 48.7 bits (100), Expect(4) = 2e-056
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2 / -3
Query: 1013 *FGLTTLNARQYVEECSESSKMTCFSVLP 1099
* GLTTLNARQ EECS SS++ C SVLP
Sbjct: 87 *LGLTTLNARQ*AEECSGSSRIICLSVLP 1
Score = 41.8 bits (85), Expect(2) = 1e-035
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1 / +3
Query: 1082 KSSLKIRNTLQHIVLHLEWLIQII 1011
K LKI+NTLQ IVLHLEWLI I+
Sbjct: 18 KLFLKIQNTLQPIVLHLEWLIPIM 89
Score = 41.4 bits (84), Expect(2) = 1e-032
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / -2
Query: 1012 MIWINHSKCKTIC*RVFRIFKDD 1080
MI INHSKCKTI *RVF IFK++
Sbjct: 88 MIGINHSKCKTIG*RVFWIFKNN 20
Score = 38.2 bits (77), Expect(2) = 1e-024
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = -2 / +1
Query: 1099 GEN*KASHL*RFGTLFNILSCI*SG*SKS 1013
G+N +A++ *R TLF++LSCI*SG*S+S
Sbjct: 1 GKNREANYS*RSRTLFSLLSCI*SG*SQS 87
Score = 37.7 bits (76), Expect(2) = 1e-021
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3 / -1
Query: 1011 NDLD*PL*MQDNMLKSVPNLQR*LAFQF 1094
+D D*PL*MQDN LKSV +LQ * A F
Sbjct: 89 HDWD*PL*MQDNRLKSVLDLQE*FASLF 6
Score = 37.3 bits (75), Expect(3) = 9e-084
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +1
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 463 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 609
Score = 26.3 bits (51), Expect(4) = 2e-056
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 480 CYCVSIPICC 451
Score = 23.5 bits (45), Expect(4) = 2e-056
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 611 HKHNLYSLQAKSAFPSSMET 552
>gb|CW435810.1|CW435810 fsbb001f152c06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f152c06, DNA
sequence
Length = 735
Score = 220 bits (475), Expect(2) = 4e-077
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = -3 / -2
Query: 1338 IAELQSVIVRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRW 1159
I+E+ S+++ GMLPTDFDAFICNSGS+IYYP S + P+NS++TFALD N++SHIEYRW
Sbjct: 734 ISEINSLLLSGGMLPTDFDAFICNSGSNIYYPSYSGETPNNSKITFALDQNHQSHIEYRW 555
Query: 1158 GGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHL 1009
GGEGLRKYLVKWA+SVVER+GRTE+Q+IFED EHSS YCLAFRVVNPNH+
Sbjct: 554 GGEGLRKYLVKWATSVVERKGRTERQIIFEDPEHSSAYCLAFRVVNPNHV 405
Score = 152 bits (326), Expect(2) = 2e-050
Identities = 70/98 (71%), Positives = 75/98 (76%)
Frame = +2 / +1
Query: 1013 *FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*LW 1192
* GLTTLNARQ EECS SSK+ C SVLP LSTTE AH T+YFL PSPPQRYSICD *
Sbjct: 409 *LGLTTLNARQ*AEECSGSSKIICLSVLPFLSTTEVAHFTRYFLSPSPPQRYSICDW*F* 588
Query: 1193 SNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMP 1306
SNANV EL G S + G* + LPLL +KASKSVGSMP
Sbjct: 589 SNANVILELFGVSPEYEG**MLLPLLQMKASKSVGSMP 702
Score = 111 bits (237), Expect(2) = 3e-034
Identities = 55/101 (54%), Positives = 69/101 (68%)
Frame = -2 / -1
Query: 1303 HAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVLS*V 1124
HA * *C ++Q*WE ++LS * KQ YIC+ P+TY VSLGRRR KE+ V
Sbjct: 699 HASH*F*CFHLQ*WE*HLLSFIFR*NTKQLQDYICIRSKSPVTYRVSLGRRRTKEISCEV 520
Query: 1123 GFFSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFASF 1001
G FS RKKG+N +A++ *R TLF++LSCI*SG*S+S F
Sbjct: 519 GHFSGRKKGKNREANYF*RSRTLFSLLSCI*SG*SQSCKPF 397
Score = 94.5 bits (200), Expect(2) = 4e-077
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = -3 / -2
Query: 1011 LPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRY 880
LPPLKEL+KLMRIQSLRC+ALYNH ATRLSV+P+HASRSQALR+
Sbjct: 281 LPPLKELRKLMRIQSLRCNALYNHSATRLSVVPIHASRSQALRF 150
Score = 73.9 bits (155), Expect(2) = 2e-050
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +2 / +1
Query: 884 LRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGG 1009
LRA*D DA IG TD+LVA WLY A QR DWILINF +SFKGG
Sbjct: 154 LRA*DLDAWIGTTDNLVALWLYNALQRRDWILINFLNSFKGG 279
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1 / +3
Query: 1135 VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
+ P*+FSSPTIL+M* V+++ KCN G+ W T +* I+ + PTIA + IK+S +H
Sbjct: 531 IFP*SFSSPTILDM*LVILI*CKCNLGVVWCFTGI*RIVNVTPTIADESIKISGKH 698
Score = 56.5 bits (117), Expect(2) = 3e-034
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = -2 / -1
Query: 1009 ASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKV 881
+SF+G +VDENP++ L C V*P R+Q IC+ I ISGSKV
Sbjct: 279 SSFKGIEEVDENPISPLQCIV*PQRYQIICSPYPRIKISGSKV 151
Score = 53.8 bits (111), Expect(3) = 2e-029
Identities = 25/42 (59%), Positives = 26/42 (61%)
Frame = +3 / +2
Query: 882 TLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKE 1007
TLEPEI M LQI W R GYT H N GFSST + P KE
Sbjct: 152 TLEPEILMRG*GLQIIW*RCGYTMHCNGEIGFSSTSSIPLKE 277
Score = 47.3 bits (97), Expect(3) = 2e-029
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +3 / +2
Query: 1002 KEANDLD*PL*MQDNMLKSVPNLQR*LAFQFSPFF 1106
K +D D*PL*MQDN LKSV +LQ+* A F PFF
Sbjct: 398 KGLHDWD*PL*MQDNRLKSVLDLQK*FASLFFPFF 502
>gb|BZ627055.1|BZ627055 ih50a05.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih50a05 5', DNA sequence
Length = 384
Score = 215 bits (464), Expect(2) = 2e-065
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -2 / +3
Query: 883 VFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGC 704
VFVYSLGHRVA+CCGHCW*NW*F*LRGTVWRS QDSH *GWIQHSCE*DPY QKVPFTGC
Sbjct: 45 VFVYSLGHRVARCCGHCW*NW*F*LRGTVWRSSQDSHP*GWIQHSCE*DPYSQKVPFTGC 224
Query: 703 CCS**LKYHWN*GIQHW*HQVCYAT 629
CCS**LKYHWN*GIQHW*HQVCYAT
Sbjct: 225 CCS**LKYHWN*GIQHW*HQVCYAT 299
Score = 202 bits (435), Expect(2) = 3e-060
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = -3 / +1
Query: 885 RYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQD 706
RYLSIRWGIELP+AVVIVGETGDSDYEELFGGLHKTVI+KGGFNTPANRIHTVRRYPLQD
Sbjct: 43 RYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQD 222
Query: 705 VVALDSSNIIGIEGFSTGDIRSAMQQ 628
VVALDSSNIIGIEGFSTGDIRSAMQQ
Sbjct: 223 VVALDSSNIIGIEGFSTGDIRSAMQQ 300
Score = 192 bits (413), Expect(2) = 4e-062
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +1 / -1
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSD MDPIRRSVESTL DDCLV+TSKQFL
Sbjct: 300 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDCMDPIRRSVESTLKDDCLVKTSKQFL 121
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP 885
VIRITSFTNNDHSIWQLYAPANRQIP
Sbjct: 120 VIRITSFTNNDHSIWQLYAPANRQIP 43
Score = 158 bits (339), Expect(2) = 3e-046
Identities = 69/86 (80%), Positives = 69/86 (80%)
Frame = +2 / -2
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPL MTVL R
Sbjct: 299 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL*RPPNSSS 120
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYL 886
TMTTA GNSMPQRIDKYL
Sbjct: 119 *SESPVSPTMTTASGNSMPQRIDKYL 42
Score = 158 bits (339), Expect = 3e-037
Identities = 72/86 (83%), Positives = 74/86 (86%)
Frame = -1 / +2
Query: 884 GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRM 705
GICLFAGA*SCQMLWSLLVKLVILITRNCLEV TRQSSLRVDSTLLRIGSI+SEGTLYRM
Sbjct: 44 GICLFAGA*SCQMLWSLLVKLVILITRNCLEVFTRQSSLRVDSTLLRIGSIQSEGTLYRM 223
Query: 704 XXXXXXXXXXXLRDSALVTSGLLCNN 627
LRDSALVTSGLLCN+
Sbjct: 224 LLLLIAQISLELRDSALVTSGLLCNS 301
Score = 130 bits (279), Expect(3) = 3e-037
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = +3 / -3
Query: 630 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPR 809
VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF* YGSYSQEC*IHP* *LSC DLQTVPR
Sbjct: 298 VA*QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*LYGSYSQEC*IHP*G*LSCEDLQTVPR 119
Score = 69.3 bits (145), Expect(2) = 4e-062
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2 / -2
Query: 545 YISVVCFFLSINNKIDCSWCHCVGIPSCC 631
++ +CFFL INNK DC+WCHCVGIPSCC
Sbjct: 380 FVLFICFFLYINNKTDCTWCHCVGIPSCC 294
Score = 57.0 bits (118), Expect(2) = 2e-065
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1 / +2
Query: 629 NSLVYPHNDTNCNLFCY**KERNR 558
NSLVYPHNDT CNLFCY* KERN+
Sbjct: 296 NSLVYPHNDTKCNLFCY*YKERNK 367
Score = 52.8 bits (109), Expect(2) = 3e-060
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2 / +3
Query: 628 TAWYTHTMTPTAIYFVINRKKETDNRN 548
TAWYTHTMTP+AI FVIN KKET+ ++
Sbjct: 297 TAWYTHTMTPSAICFVINIKKETNEQH 377
Score = 50.1 bits (103), Expect(2) = 3e-046
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1 / -1
Query: 559 LFLSFY**QNRLQLVSLCGYTKLL 630
LFLS Y**QNRL LVSLCGYTKLL
Sbjct: 366 LFLSLY**QNRLHLVSLCGYTKLL 295
Score = 35.9 bits (72), Expect(3) = 3e-037
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -3
Query: 579 ITK*IAVGVIVWVYQAV 629
ITK IA+GVIVWVYQAV
Sbjct: 346 ITKQIALGVIVWVYQAV 296
Score = 29.9 bits (59), Expect(3) = 3e-037
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -3
Query: 849 LATLCPSE*TNT 884
LATLCPSE*TNT
Sbjct: 79 LATLCPSE*TNT 44
>gb|BG463033.1|BG463033 EM1_46_F12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 648
Score = 227 bits (491), Expect(2) = 3e-063
Identities = 89/112 (79%), Positives = 104/112 (92%)
Frame = -3 / +3
Query: 963 RCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLH 784
RC+ALYNH ATRLSV+P+HASRSQALRYL IRWGIE+PN V+VGE+GDSDYEEL GGLH
Sbjct: 3 RCNALYNHSATRLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLH 182
Query: 783 KTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
+T+I+KG FN PANRIHTVRRYPLQDVVALDSSNIIG+EG++T D++SA+QQ
Sbjct: 183 RTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQ 338
Score = 160 bits (344), Expect(4) = 4e-043
Identities = 71/112 (63%), Positives = 77/112 (68%)
Frame = +2 / -3
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 337 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWRPPSSSS 158
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QR 964
T T FG S+PQRI KYLRA*D DA IG TD+LVA WLY A QR
Sbjct: 157 *SESPLSPTRTATFGTSIPQRIHKYLRA*DLDAWIGTTDNLVALWLYNALQR 2
Score = 116 bits (248), Expect = 1e-024
Identities = 56/125 (44%), Positives = 72/125 (57%)
Frame = -2 / +2
Query: 961 LSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQ 782
L C V*P R+Q IC+ I ISGSKV VY+LG R AKCC C * F LRGT SP
Sbjct: 5 LQCIV*PQRYQIICSPYPRIKISGSKVLVYTLGDRGAKCCSPCG*KRRFRLRGTAGGSP* 184
Query: 781 DSHR*GWIQHSCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYATTAWYTHTMT 602
D + G +QH + DP+G+++PF GCC LK+H G+ H * +VC A +
Sbjct: 185 DHYPEGRVQHPRKQDPHGEEIPFAGCCRPRQLKHHRCRGLHHG*PEVCPAADGYTHTITP 364
Query: 601 PTAIY 587
P ++
Sbjct: 365 PELLF 379
Score = 112 bits (239), Expect = 2e-023
Identities = 53/112 (47%), Positives = 74/112 (66%)
Frame = +1 / -2
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LL R V +L+++D+*A++ +NIL RV R+DP+ VE L D+ +ET +QFL
Sbjct: 338 LLQGRLQVIRGVALDTDDV*AVEGDNILQRVSPHRVDPVCGDVELALQDNGPMETPQQFL 159
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTT 963
VI I +FT+ D +IW LY P Q+P*SLRS C+ +YR* G A+VIQ + T
Sbjct: 158 VI*IAAFTHKDCNIWHLYPPTYTQVP*SLRS*CVDRDYR*SGSAVVIQCIAT 3
Score = 37.3 bits (75), Expect(2) = 3e-063
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +2
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 344 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 490
Score = 26.3 bits (51), Expect(4) = 4e-043
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 361 CYCVSIPICC 332
Score = 23.5 bits (45), Expect(4) = 4e-043
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 492 HKHNLYSLQAKSAFPSSMET 433
Score = 23.5 bits (45), Expect(4) = 4e-043
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 338 FHYQHLNKFVPSVQ 379
FHYQ++N+F+ +Q
Sbjct: 624 FHYQYVNRFLVWLQ 583
>gb|BI099230.1|BI099230 IP1_40_A12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 630
Score = 221 bits (477), Expect(2) = 3e-061
Identities = 87/110 (79%), Positives = 102/110 (92%)
Frame = -3 / +2
Query: 957 HALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKT 778
+ALYNH ATRLSV+P+HASRSQALRYL IRWGIE+PN V+VGE+GDSDYEEL GGLH+T
Sbjct: 2 NALYNHSATRLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRT 181
Query: 777 VIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
+I+KG FN PANRIHTVRRYPLQDVVALDSSNIIG+EG++T D++SA+QQ
Sbjct: 182 IILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQ 331
Score = 157 bits (338), Expect(4) = 3e-042
Identities = 69/109 (63%), Positives = 75/109 (68%)
Frame = +2 / -1
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 330 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWRPPSSSS 151
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA 955
T T FG S+PQRI KYLRA*D DA IG TD+LVA WLY A
Sbjct: 150 *SESPLSPTRTATFGTSIPQRIHKYLRA*DLDAWIGTTDNLVALWLYNA 4
Score = 114 bits (244), Expect = 4e-024
Identities = 55/123 (44%), Positives = 71/123 (57%)
Frame = -2 / +1
Query: 955 CSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDS 776
C V*P R+Q IC+ I ISGSKV VY+LG R AKCC C * F LRGT SP D
Sbjct: 4 CIV*PQRYQIICSPYPRIKISGSKVLVYTLGDRGAKCCSPCG*KRRFRLRGTAGGSP*DH 183
Query: 775 HR*GWIQHSCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYATTAWYTHTMTPT 596
+ G +QH + DP+G+++PF GCC LK+H G+ H * +VC A + P
Sbjct: 184 YPEGRVQHPRKQDPHGEEIPFAGCCRPRQLKHHRCRGLHHG*PEVCPAADGYTHTITPPE 363
Query: 595 AIY 587
++
Sbjct: 364 LLF 372
Score = 110 bits (234), Expect = 9e-023
Identities = 52/108 (48%), Positives = 72/108 (66%)
Frame = +1 / -3
Query: 628 LLHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFL 807
LL R V +L+++D+*A++ +NIL RV R+DP+ VE L D+ +ET +QFL
Sbjct: 331 LLQGRLQVIRGVALDTDDV*AVEGDNILQRVSPHRVDPVCGDVELALQDNGPMETPQQFL 152
Query: 808 VIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQ 951
VI I +FT+ D +IW LY P Q+P*SLRS C+ +YR* G A+VIQ
Sbjct: 151 VI*IAAFTHKDCNIWHLYPPTYTQVP*SLRS*CVDRDYR*SGSAVVIQ 8
Score = 37.3 bits (75), Expect(2) = 3e-061
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +1
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 337 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 483
Score = 26.3 bits (51), Expect(4) = 3e-042
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -1
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 354 CYCVSIPICC 325
Score = 23.5 bits (45), Expect(4) = 3e-042
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -2
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 485 HKHNLYSLQAKSAFPSSMET 426
Score = 23.5 bits (45), Expect(4) = 3e-042
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 338 FHYQHLNKFVPSVQ 379
FHYQ++N+F+ +Q
Sbjct: 617 FHYQYVNRFLVWLQ 576
>gb|BG462976.1|BG462976 EM1_46_A04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 613
Score = 203 bits (438), Expect(2) = 6e-056
Identities = 80/101 (79%), Positives = 94/101 (93%)
Frame = -3 / +3
Query: 930 RLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNT 751
RLSV+P+HASRSQALRYL IRWGIE+PN V+VGE+GDSDYEEL GGLH+T+I+KG FN
Sbjct: 3 RLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRTIILKGEFNI 182
Query: 750 PANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
PANRIHTVRRYPLQDVVALDSSNIIG+EG++T D++SA+QQ
Sbjct: 183 PANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQ 305
Score = 143 bits (307), Expect(3) = 2e-036
Identities = 63/101 (62%), Positives = 69/101 (68%)
Frame = +2 / -1
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 304 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWRPPSSSS 125
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSL 931
T T FG S+PQRI KYLRA*D DA IG TD+L
Sbjct: 124 *SESPLSPTRTATFGTSIPQRIHKYLRA*DLDAWIGTTDNL 2
Score = 103 bits (220), Expect = 8e-021
Identities = 50/115 (43%), Positives = 65/115 (56%)
Frame = -2 / +2
Query: 931 QAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQH 752
Q IC+ I ISGSKV VY+LG R AKCC C * F LRGT SP D + G +QH
Sbjct: 2 QIICSPYPRIKISGSKVLVYTLGDRGAKCCSPCG*KRRFRLRGTAGGSP*DHYPEGRVQH 181
Query: 751 SCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYATTAWYTHTMTPTAIY 587
+ DP+G+++PF GCC LK+H G+ H * +VC A + P ++
Sbjct: 182 PRKQDPHGEEIPFAGCCRPRQLKHHRCRGLHHG*PEVCPAADGYTHTITPPELLF 346
Score = 37.3 bits (75), Expect(2) = 6e-056
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +2
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 311 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 457
Score = 26.3 bits (51), Expect(3) = 2e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -1
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 328 CYCVSIPICC 299
Score = 23.5 bits (45), Expect(3) = 2e-036
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -2
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 459 HKHNLYSLQAKSAFPSSMET 400
>gb|BI099139.1|BI099139 IP1_38_B12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 583
Score = 190 bits (410), Expect(2) = 4e-052
Identities = 75/94 (79%), Positives = 87/94 (92%)
Frame = -3 / +3
Query: 909 HASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHT 730
HASRSQALRYL IRWGIE+PN V+VGE+GDSDYEEL GGLH+T+I+KG FN PANRIHT
Sbjct: 3 HASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRTIILKGEFNIPANRIHT 182
Query: 729 VRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
VRRYPLQDVVALDSSNIIG+EG++T D++SA+QQ
Sbjct: 183 VRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQ 284
Score = 133 bits (284), Expect(4) = 5e-035
Identities = 58/93 (62%), Positives = 63/93 (67%)
Frame = +2 / -1
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 283 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWRPPSSSS 104
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDA 907
T T FG S+PQRI KYLRA*D DA
Sbjct: 103 *SESPLSPTRTATFGTSIPQRIHKYLRA*DLDA 5
Score = 37.3 bits (75), Expect(2) = 4e-052
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +2
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 290 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 436
Score = 26.3 bits (51), Expect(4) = 5e-035
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -1
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 307 CYCVSIPICC 278
Score = 23.5 bits (45), Expect(4) = 5e-035
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -2
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 438 HKHNLYSLQAKSAFPSSMET 379
Score = 23.5 bits (45), Expect(4) = 5e-035
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 338 FHYQHLNKFVPSVQ 379
FHYQ++N+F+ +Q
Sbjct: 570 FHYQYVNRFLVWLQ 529
>gb|CF070574.1|CF070574 FE1_1_C02.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_1_C02_A002 3', mRNA sequence
Length = 458
Score = 100 bits (212), Expect(5) = 1e-048
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3 / -2
Query: 282 KCELCILEACLLKILPQNVFTINI*TNLFRLYSWMYPLTSSSIQR 416
KCELCILEACLLK+LPQNV TINI*TNLFRLYSWMYPLT SS+Q+
Sbjct: 319 KCELCILEACLLKMLPQNVSTINI*TNLFRLYSWMYPLTCSSLQK 185
Score = 96.8 bits (205), Expect(5) = 9e-049
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -2 / +3
Query: 439 PWIPHWRFLWIEELVNGYIQLYRRNKFVQMLIVKTFCGSIFSKQASNIQSSHF 281
P P W EE VNGYIQLYRRNKFV MLIV+TFCGSIFSKQASNIQSSHF
Sbjct: 162 PLDPRTGNFWSEEHVNGYIQLYRRNKFV*MLIVETFCGSIFSKQASNIQSSHF 320
Score = 95.5 bits (202), Expect(5) = 7e-041
Identities = 41/47 (87%), Positives = 41/47 (87%)
Frame = +2 / -1
Query: 281 KV*TLYIGSLFAENTSTKCFHYQHLNKFVPSVQLDVSINKLFNPKKS 421
KV* LYIGSLFAEN STKCFHYQHLNKFV SVQLDVSIN LF PK S
Sbjct: 320 KV*ALYIGSLFAENASTKCFHYQHLNKFVSSVQLDVSINMLFAPKIS 180
Score = 94.1 bits (199), Expect(4) = 3e-041
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = -3 / +1
Query: 420 DFFGLKSLLMDTSNCTDGTNLFKC***KHFVEVFSANKLPIYKVHTF 280
+ FG KS+LMDTS+CTD TNLFKC** KHFVE FSANKLPIYK HTF
Sbjct: 181 EIFGAKSMLMDTSSCTDETNLFKC**WKHFVEAFSANKLPIYKAHTF 321
Score = 91.8 bits (194), Expect(4) = 2e-037
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1 / +2
Query: 413 LD*RAC*WIHPTVQTEQICSNVDSENILWKYFQQTSFQYTKFTL 282
L+ RAC*WIHP VQT+QIC NVDS NILWK+FQQTSFQYTK TL
Sbjct: 188 LERRAC*WIHPAVQTKQICLNVDSGNILWKHFQQTSFQYTKLTL 319
Score = 73.5 bits (154), Expect(5) = 9e-049
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +2
Query: 573 ERKKQTTEIYDTNT*FPFYWKCPILPASHLMYVCG 469
ER K TT I+DTNT FPFYWK PILPASHL+YVCG
Sbjct: 32 ERNK*TTRIFDTNTLFPFYWKRPILPASHLIYVCG 136
Score = 73.0 bits (153), Expect(4) = 3e-041
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -2 / +1
Query: 595 AIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCVW 470
++ +I RKK+ +N NIRYK+ VSILLE SDFACQSFN+CVW
Sbjct: 10 SVLLLI*RKKQMNNPNIRYKHFVSILLETSDFACQSFNLCVW 135
Score = 70.3 bits (147), Expect(5) = 1e-048
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1 / -2
Query: 469 TTHIH*MTGRQNRTFPIEWKLSICIVYFCCLFLSFY 576
TTHI *MTGRQNRTFPIEWK S+CI Y C F+SF+
Sbjct: 136 TTHID*MTGRQNRTFPIEWKQSVCIEYSGCSFVSFF 29
Score = 66.1 bits (138), Expect(4) = 2e-037
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -1 / +3
Query: 572 KERNRQQKYTIQILSFHSIGNVRFCLPVI*CMCVV 468
KE N Q +Y+IQ L FHSIGNVRFCLPVI* MCVV
Sbjct: 33 KETNEQPEYSIQTLCFHSIGNVRFCLPVI*SMCVV 137
Score = 61.1 bits (127), Expect(5) = 7e-041
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3 / -1
Query: 471 HTHTLNDWQAKSDISNRMETKYLYRI 548
HTH LNDWQAKSD+SNRMETK LYRI
Sbjct: 134 HTHRLNDWQAKSDVSNRMETKCLYRI 57
Score = 41.4 bits (84), Expect(5) = 1e-048
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3 / -1
Query: 429 GIQGNVIHNPCRDH 470
GIQGNVIHNPCRDH
Sbjct: 173 GIQGNVIHNPCRDH 132
Score = 40.9 bits (83), Expect(5) = 9e-049
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +1
Query: 469 WSLHGL*MTFPWIP 428
WSLHGL*MTFPWIP
Sbjct: 133 WSLHGL*MTFPWIP 174
Score = 35.4 bits (71), Expect(5) = 7e-041
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -3
Query: 431 DPRECHS*PVQGP 469
DPRECHS*P+QGP
Sbjct: 171 DPRECHS*PMQGP 133
Score = 33.1 bits (66), Expect(4) = 3e-041
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / +2
Query: 468 GPCTGYE*HSLGS 430
GPC GYE*HSLGS
Sbjct: 134 GPCMGYE*HSLGS 172
Score = 32.7 bits (65), Expect(4) = 2e-037
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 470 VVPARVMNDIPLDP 429
VVPA VMNDIPLDP
Sbjct: 132 VVPAWVMNDIPLDP 173
Score = 31.3 bits (62), Expect(5) = 1e-048
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 557 VCFFLSINNKIDCS 598
+CFFL INNK DC+
Sbjct: 44 ICFFLYINNKTDCT 3
Score = 30.9 bits (61), Expect(5) = 9e-049
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / +2
Query: 596 CNLFCY**KERNR 558
CNLFCY* KERN+
Sbjct: 5 CNLFCY*YKERNK 43
Score = 28.6 bits (56), Expect(5) = 9e-049
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / +1
Query: 299 YTKFTLSIASMWSI*LQCNRLRACLYL 219
Y T SI S WS+*LQ N L + ++
Sbjct: 304 YKAHTFSITSKWSL*LQHNPLNSFFFI 384
Score = 27.2 bits (53), Expect(4) = 3e-041
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / +2
Query: 283 FPSLQCGASDYSAIV*GL 230
FPSLQ GA DYS +* L
Sbjct: 320 FPSLQSGAYDYSTTL*TL 373
Score = 27.2 bits (53), Expect(5) = 1e-048
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / -1
Query: 226 KQALRRLHCNQMLHIEAMESVNFVY 300
K+ + L CN LH E ME V +Y
Sbjct: 377 KKEFKGLCCNHKLHFEVMEKV*ALY 303
Score = 26.3 bits (51), Expect(5) = 7e-041
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 559 LFLSFY**QNRLQL 600
LFLS Y**QNRL L
Sbjct: 42 LFLSLY**QNRLHL 1
Score = 25.4 bits (49), Expect(5) = 7e-041
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2 / -2
Query: 230 KPLDDCTVIRCSTLKRWK 283
K L C VI STLK WK
Sbjct: 373 KSLKGCAVIISSTLK*WK 320
Score = 24.0 bits (46), Expect(4) = 2e-037
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 598 TAIYFVINRKKETDNR 551
+AI FVIN KKET+ +
Sbjct: 3 SAICFVINIKKETNEQ 50
>gb|BM326900.1|BM326900 PIC1_4_E07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 565
Score = 173 bits (372), Expect(2) = 6e-047
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = -3 / +1
Query: 885 RYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQD 706
RYL IRWGIE+PN V+VGE+GDSDYEEL GGLH+T+I+KG FN PANRIHTVRRYPLQD
Sbjct: 1 RYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRTIILKGEFNIPANRIHTVRRYPLQD 180
Query: 705 VVALDSSNIIGIEGFSTGDIRSAMQQ 628
VVALDSSNIIG+EG++T D++SA+QQ
Sbjct: 181 VVALDSSNIIGVEGYTTDDLKSALQQ 258
Score = 120 bits (256), Expect(4) = 3e-031
Identities = 51/85 (60%), Positives = 56/85 (65%)
Frame = +2 / -3
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXX 808
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 257 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWRPPSSSS 78
Query: 809 XXXXXXXXTMTTAFGNSMPQRIDKY 883
T T FG S+PQRI KY
Sbjct: 77 *SESPLSPTRTATFGTSIPQRIHKY 3
Score = 37.3 bits (75), Expect(2) = 6e-047
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +3
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 264 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 410
Score = 26.3 bits (51), Expect(4) = 3e-031
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 281 CYCVSIPICC 252
Score = 23.5 bits (45), Expect(4) = 3e-031
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 412 HKHNLYSLQAKSAFPSSMET 353
Score = 23.5 bits (45), Expect(4) = 3e-031
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 338 FHYQHLNKFVPSVQ 379
FHYQ++N+F+ +Q
Sbjct: 544 FHYQYVNRFLVWLQ 503
>gb|BG103716.1|BG103716 RHIZ2_39_H10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 550
Score = 184 bits (396), Expect = 4e-045
Identities = 71/124 (57%), Positives = 96/124 (77%)
Frame = -3 / +1
Query: 999 KELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETG 820
KE+++ MRIQ+LRCH LY+H ++L+VIP+ ASRSQALRYL IRWG+EL N V+VGE G
Sbjct: 1 KEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVVVGECG 180
Query: 819 DSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRS 640
D+DYE L GG+HKT+I+KG FNT N++H R Y QDVV+L+ I IEG+ +++S
Sbjct: 181 DTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKS 360
Query: 639 AMQQ 628
A++Q
Sbjct: 361 ALRQ 372
>gb|BG410864.1|BG410864 EM1_26_H05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 178 bits (384), Expect = 2e-043
Identities = 69/121 (57%), Positives = 93/121 (76%)
Frame = -3 / +1
Query: 990 QKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSD 811
++ MRIQ+LRCH LY+H ++L+VIP+ ASRSQALRYL IRWG+EL N V+VGE GD+D
Sbjct: 1 RRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVVVGECGDTD 180
Query: 810 YEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQ 631
YE L GG+HKT+I+KG FNT N++H R Y QDVV+L+ I IEG+ +++SA++
Sbjct: 181 YEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALR 360
Query: 630 Q 628
Q
Sbjct: 361 Q 363
>gb|CL184321.1|CL184321 104_397_10898775_114_32360_056 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898775, DNA
sequence
Length = 656
Score = 87.2 bits (184), Expect(3) = 3e-038
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = -3 / -2
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
SRCRENGL NIH+FSWPEHCKNYLSRI +LGPR PA +E+
Sbjct: 190 SRCRENGLTNIHRFSWPEHCKNYLSRILTLGPRSPAIGNREE 65
Score = 63.8 bits (133), Expect(3) = 3e-038
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -2
Query: 1723 IYQVLENGLLVDPHDQHAIADALYKMLSEKQ 1631
I QVL NGLLVDPHDQ+AIADALYK+LS+KQ
Sbjct: 289 IIQVLNNGLLVDPHDQNAIADALYKLLSDKQ 197
Score = 60.6 bits (126), Expect(4) = 6e-021
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -2 / -1
Query: 1618 MSRKWIEKYTPIFLA*TLQELLVKDIKSWSKTSCFRMQR 1502
+ R+W +KY+PI +A*TLQEL VKDI SW K SC+ QR
Sbjct: 185 VQREWTDKYSPILVA*TLQELPVKDINSWPKVSCYW*QR 69
Score = 57.0 bits (118), Expect(4) = 3e-023
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3 / +1
Query: 1503 LCMRKQDVLDQDLISLTSNSCNVQAKKIGVYFSIHFL 1613
LC + Q+ L Q+LISLT NSCNVQA +IG Y S+H L
Sbjct: 70 LCYQ*QETLGQELISLTGNSCNVQATRIGEYLSVHSL 180
Score = 48.7 bits (100), Expect(3) = 3e-038
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -2 / -3
Query: 1783 IEAAMHGLPVIATKNGAPVEIYQV 1712
++AAM+GLP+IATKNGAPVEI QV
Sbjct: 456 VQAAMNGLPIIATKNGAPVEINQV 385
Score = 43.2 bits (88), Expect(4) = 3e-023
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 1712 NLINFNRSPIFCCNNRQTVHGSLYQGDT 1795
+LINFNR IFC N RQT+H SL+ T
Sbjct: 385 HLINFNRGSIFCRNYRQTIHSSLHMDIT 468
Score = 39.1 bits (79), Expect(4) = 3e-023
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRPFSRT* 1718
Q+C SE L ASA+A *S GSTRRP RT*
Sbjct: 192 QSCLSERSLYSASAMAF*SCGSTRRPLFRT* 284
Score = 35.4 bits (71), Expect(4) = 6e-021
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1 / -2
Query: 1778 GCHARFACYCNKKWGSC*NLSG 1713
GC+ FA C+KKW C*N SG
Sbjct: 451 GCYEWFAYNCDKKWSPC*N*SG 386
Score = 34.1 bits (68), Expect(4) = 6e-021
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPV 1754
F YFEQFGVTLIE +P+
Sbjct: 585 FVNVAYFEQFGVTLIEVRFFEVPI 514
Score = 27.6 bits (54), Expect(4) = 6e-021
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 1704 MVSLLIPMISMQLQMPSIRCFLKSSF 1627
MVSLLI I M L+M I FL ++F
Sbjct: 270 MVSLLIRTIRMPLRMHYINFFLTNNF 193
Score = 26.7 bits (52), Expect(4) = 3e-023
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 1779 SIKVTPNCSK*QHLQK 1826
SI+VTPNCSK* K
Sbjct: 539 SIRVTPNCSK*ATFTK 586
>gb|CW078961.1|CW078961 104_397_10898775_114_32380_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898775, DNA
sequence
Length = 683
Score = 84.5 bits (178), Expect(3) = 2e-037
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3 / -3
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPA 1516
SRCRENGL NIH+FSWPEHCKNYLSRI +LGPR PA
Sbjct: 186 SRCRENGLTNIHRFSWPEHCKNYLSRILTLGPRSPA 79
Score = 63.8 bits (133), Expect(3) = 2e-037
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -3
Query: 1723 IYQVLENGLLVDPHDQHAIADALYKMLSEKQ 1631
I QVL NGLLVDPHDQ+AIADALYK+LS+KQ
Sbjct: 285 IIQVLNNGLLVDPHDQNAIADALYKLLSDKQ 193
Score = 52.8 bits (109), Expect(4) = 4e-022
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 1518 QDVLDQDLISLTSNSCNVQAKKIGVYFSIHFL 1613
Q+ L Q+LISLT NSCNVQA +IG Y S+H L
Sbjct: 81 QETLGQELISLTGNSCNVQATRIGEYLSVHSL 176
Score = 48.7 bits (100), Expect(3) = 2e-037
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -2 / -1
Query: 1783 IEAAMHGLPVIATKNGAPVEIYQV 1712
++AAM+GLP+IATKNGAPVEI QV
Sbjct: 452 VQAAMNGLPIIATKNGAPVEINQV 381
Score = 43.2 bits (88), Expect(4) = 4e-022
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +3
Query: 1712 NLINFNRSPIFCCNNRQTVHGSLYQGDT 1795
+LINFNR IFC N RQT+H SL+ T
Sbjct: 381 HLINFNRGSIFCRNYRQTIHSSLHMDIT 464
Score = 39.1 bits (79), Expect(4) = 4e-022
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRPFSRT* 1718
Q+C SE L ASA+A *S GSTRRP RT*
Sbjct: 188 QSCLSERSLYSASAMAF*SCGSTRRPLFRT* 280
Score = 26.7 bits (52), Expect(4) = 4e-022
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 1779 SIKVTPNCSK*QHLQK 1826
SI+VTPNCSK* K
Sbjct: 535 SIRVTPNCSK*ATFTK 582
>gb|BM326867.1|BM326867 PIC1_4_B01.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 453
Score = 139 bits (298), Expect(2) = 8e-037
Identities = 54/68 (79%), Positives = 64/68 (94%)
Frame = -3 / +3
Query: 831 GETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTG 652
GE+GDSDYEEL GGLH+T+I+KG FN PANRIHTVRRYPLQDVVALDSSNIIG+EG++T
Sbjct: 3 GESGDSDYEELLGGLHRTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTD 182
Query: 651 DIRSAMQQ 628
D++SA+QQ
Sbjct: 183 DLKSALQQ 206
Score = 100 bits (212), Expect(3) = 1e-023
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = +2 / -3
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWR 790
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 205 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWR 44
Score = 37.3 bits (75), Expect(2) = 8e-037
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +2
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 212 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 358
Score = 26.3 bits (51), Expect(3) = 1e-023
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 229 CYCVSIPICC 200
Score = 23.5 bits (45), Expect(3) = 1e-023
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 360 HKHNLYSLQAKSAFPSSMET 301
>gb|BE597862.1|BE597862 PI1_66_C12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 666
Score = 155 bits (332), Expect = 3e-036
Identities = 60/107 (56%), Positives = 81/107 (75%)
Frame = -3 / +2
Query: 948 YNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIV 769
Y+H ++L+VIP+ ASRSQALRYL IRWG+EL N V+VGE GD+DYE L GG+HKT+I+
Sbjct: 2 YSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVVVGECGDTDYEGLLGGVHKTIIL 181
Query: 768 KGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
KG FNT N++H R Y QDVV+L+ I IEG+ +++SA++Q
Sbjct: 182 KGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQ 322
>gb|BF422038.1|BF422038 FM1_12_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 673
Score = 144 bits (310), Expect = 3e-033
Identities = 57/102 (55%), Positives = 77/102 (75%)
Frame = -3 / +3
Query: 933 TRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFN 754
++L+VIP+ ASRSQALRYL IRW +EL N V+VGE GD+DYE L GG+HKT+I+KG FN
Sbjct: 6 SKLNVIPVLASRSQALRYLYIRWXVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFN 185
Query: 753 TPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
T N++H R Y QDVV+L+ I IEG+ +++SA++Q
Sbjct: 186 TAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQ 311
>gb|BM318323.1|BM318323 PI1_77_C05.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 136 bits (292), Expect = 9e-031
Identities = 53/92 (57%), Positives = 69/92 (75%)
Frame = -3 / +2
Query: 903 SRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVR 724
SRSQALRYL IRWG+EL N V+VGE GD+DYE L GG+HKT+I+KG FNT N++H R
Sbjct: 2 SRSQALRYLYIRWGVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANR 181
Query: 723 RYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
Y QDVV+L+ I IEG+ +++SA++Q
Sbjct: 182 SYSFQDVVSLEKQGIASIEGYGPDNLKSALRQ 277
>gb|CW276653.1|CW276653 104_750_11405606_148_35401_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405606, DNA
sequence
Length = 716
Score = 100 bits (212), Expect(3) = 1e-030
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3 / +1
Query: 282 KCELCILEACLLKILPQNVFTINI*TNLFRLYSWMYPLTSSSIQR 416
KCELCILEACLLK+LPQNV TINI*TNLFRLYSWMYPLT SS+Q+
Sbjct: 511 KCELCILEACLLKMLPQNVSTINI*TNLFRLYSWMYPLTCSSLQK 645
Score = 96.8 bits (205), Expect(3) = 3e-026
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -2 / -1
Query: 439 PWIPHWRFLWIEELVNGYIQLYRRNKFVQMLIVKTFCGSIFSKQASNIQSSHF 281
P P W EE VNGYIQLYRRNKFV MLIV+TFCGSIFSKQASNIQSSHF
Sbjct: 668 PLDPRTGNFWSEEHVNGYIQLYRRNKFV*MLIVETFCGSIFSKQASNIQSSHF 510
Score = 95.5 bits (202), Expect(3) = 2e-026
Identities = 41/47 (87%), Positives = 41/47 (87%)
Frame = +2 / +3
Query: 281 KV*TLYIGSLFAENTSTKCFHYQHLNKFVPSVQLDVSINKLFNPKKS 421
KV* LYIGSLFAEN STKCFHYQHLNKFV SVQLDVSIN LF PK S
Sbjct: 510 KV*ALYIGSLFAENASTKCFHYQHLNKFVSSVQLDVSINMLFAPKIS 650
Score = 94.1 bits (199), Expect(3) = 6e-027
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = -3 / -2
Query: 420 DFFGLKSLLMDTSNCTDGTNLFKC***KHFVEVFSANKLPIYKVHTF 280
+ FG KS+LMDTS+CTD TNLFKC** KHFVE FSANKLPIYK HTF
Sbjct: 649 EIFGAKSMLMDTSSCTDETNLFKC**WKHFVEAFSANKLPIYKAHTF 509
Score = 91.8 bits (194), Expect(2) = 2e-022
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1 / -3
Query: 413 LD*RAC*WIHPTVQTEQICSNVDSENILWKYFQQTSFQYTKFTL 282
L+ RAC*WIHP VQT+QIC NVDS NILWK+FQQTSFQYTK TL
Sbjct: 642 LERRAC*WIHPAVQTKQICLNVDSGNILWKHFQQTSFQYTKLTL 511
Score = 91.3 bits (193), Expect(2) = 1e-022
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +1 / +2
Query: 280 ESVNFVYWKLVC*KYFHKMFSLSTFEQICSVCTVGCIH*QALQSK 414
+SV+FVYWKLVC*K FHKMF LSTF+QIC VCT GCIH* AL+SK
Sbjct: 509 KSVSFVYWKLVC*KCFHKMFPLSTFKQICFVCTAGCIH*HALRSK 643
Score = 45.1 bits (92), Expect(3) = 1e-030
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 414 RNLQCGIQGNVIHNPCRDHH 473
+N QCG QG+VIHNPCRD H
Sbjct: 641 KNFQCGDQGDVIHNPCRDPH 700
Score = 39.6 bits (80), Expect(3) = 6e-027
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3 / -1
Query: 477 VCGGPCTGYE*HSLGSRTGDFF 412
+C GPC GYE*H L RTG+F+
Sbjct: 704 LCVGPCMGYE*HPLDPRTGNFW 639
Score = 37.7 bits (76), Expect(2) = 1e-022
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 413 KKSPVRDPRECHS*PVQGPPH 475
+K PVR R CHS*P+QGP H
Sbjct: 640 QKFPVRGSRGCHS*PMQGPTH 702
Score = 37.7 bits (76), Expect(3) = 2e-026
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1 / +3
Query: 403 LQSKEISSAGSKGMSFITRAGTTTHIH 483
L + +ISSAG KGMSFIT AGT T I+
Sbjct: 630 LFAPKISSAGIKGMSFITHAGTHT*IN 710
Score = 36.8 bits (74), Expect(2) = 2e-022
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 466 SLHGL*MTFPWIPHWRFL 413
SLHGL*MT P PHW+FL
Sbjct: 693 SLHGL*MTSP*SPHWKFL 640
Score = 35.0 bits (70), Expect(3) = 3e-026
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1 / -2
Query: 473 VVVPARVMNDIPLDPALEI 417
V VPA VMNDIPL PALEI
Sbjct: 700 VWVPAWVMNDIPLIPALEI 644
Score = 28.6 bits (56), Expect(3) = 1e-030
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1 / +3
Query: 226 KQALRRLHCNQMLHIEAMESVNFVY 300
K+ R L CN LH E ME V +Y
Sbjct: 453 KKEFRGLCCNHKLHFEVMEKV*ALY 527
Score = 27.6 bits (54), Expect(3) = 6e-027
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1 / -2
Query: 299 YTKFTLSIASMWSI*LQCNRLRACLY 222
Y T SI S WS+*LQ N L + +
Sbjct: 526 YKAHTFSITSKWSL*LQHNPLNSFFF 449
Score = 27.2 bits (53), Expect(3) = 3e-026
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 283 FPSLQCGASDYSAIV*GL 230
FPSLQ GA DYS +* L
Sbjct: 510 FPSLQSGAYDYSTTL*TL 457
Score = 26.7 bits (52), Expect(3) = 2e-026
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 230 KPLDDCTVIRCSTLKRWK 283
K L+ C VI STLK WK
Sbjct: 457 KSLEGCAVIISSTLK*WK 510
>gb|BF177098.1|BF177098 EM1_3_F08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 603
Score = 130 bits (279), Expect = 6e-029
Identities = 50/89 (56%), Positives = 66/89 (74%)
Frame = -3 / +2
Query: 894 QALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYP 715
QALRYL IRWG+EL N V+VGE GD+DYE L GG+HKT+I+KG FNT N++H R Y
Sbjct: 2 QALRYLYIRWGVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS 181
Query: 714 LQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
QDVV+L+ I IEG+ +++SA++Q
Sbjct: 182 FQDVVSLEKQGIASIEGYGPDNLKSALRQ 268
>gb|BE596045.1|BE596045 PI1_51_F11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 700
Score = 129 bits (277), Expect = 1e-028
Identities = 50/102 (49%), Positives = 72/102 (70%)
Frame = -3 / +1
Query: 1068 DSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQA 889
D S+ +C AF + +P + + E+++ +R++ LRCH +Y ATRL V+P+ ASRSQA
Sbjct: 28 DVASSNAHCFAFLIKDPKKVKTVDEMRERLRMRGLRCHIMYCRNATRLQVVPLLASRSQA 207
Query: 888 LRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKG 763
LRYL +RWG+ + N +I GE GD+D EE+ GLHKTVIV+G
Sbjct: 208 LRYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 333
>gb|BI351044.1|BI351044 IP1_69_B01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 467
Score = 111 bits (237), Expect(2) = 2e-028
Identities = 43/55 (78%), Positives = 52/55 (94%)
Frame = -3 / +3
Query: 792 GLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
GLH+T+I+KG FN PANRIHTVRRYPLQDVVALDSSNIIG+EG++T D++SA+QQ
Sbjct: 3 GLHRTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQ 167
Score = 100 bits (212), Expect(4) = 2e-025
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = +2 / -2
Query: 629 CCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWR 790
CC AD S V+ PS PM+FELSRATTSCKGYLLTVWILFAG+LN P + VLWR
Sbjct: 166 CCRADFRSSVV*PSTPMMFELSRATTSCKGYLLTVWILFAGMLNSPFRIMVLWR 5
Score = 37.3 bits (75), Expect(2) = 2e-028
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2 / +2
Query: 619 YTHTMTPTAIYFVINRKKETDNRNIRYKYLVSILLEMSDFACQSFNVCV 473
YTHT+TP + F ++E + + VS+L +DFAC+ +C+
Sbjct: 173 YTHTITPPELLFPHPSQRENERKGDEPSATVSMLDGNADFACRL*RLCL 319
Score = 26.3 bits (51), Expect(4) = 2e-025
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -2
Query: 602 CHCVGIPSCC 631
C+CV IP CC
Sbjct: 190 CYCVSIPICC 161
Score = 23.5 bits (45), Expect(4) = 2e-025
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -3
Query: 471 HTHTLNDWQAKSDISNRMET 530
H H L QAKS + MET
Sbjct: 321 HKHNLYSLQAKSAFPSSMET 262
Score = 23.5 bits (45), Expect(4) = 2e-025
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 338 FHYQHLNKFVPSVQ 379
FHYQ++N+F+ +Q
Sbjct: 454 FHYQYVNRFLVWLQ 413
>gb|BE598152.1|BE598152 PI1_66_C12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 517
Score = 83.1 bits (175), Expect(3) = 1e-027
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = -3 / +2
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHP 1519
+RCR+NGLKNIHQFSWPEHCKNYL+R+ +L PRHP
Sbjct: 119 TRCRQNGLKNIHQFSWPEHCKNYLARVVTLKPRHP 223
Score = 59.7 bits (124), Expect(3) = 1e-027
Identities = 21/34 (61%), Positives = 32/34 (94%)
Frame = -2 / +2
Query: 1732 PVEIYQVLENGLLVDPHDQHAIADALYKMLSEKQ 1631
PV+I++VL+NG+LVDPH+Q+ I +ALYK++S+KQ
Sbjct: 11 PVDIHRVLDNGILVDPHNQNEIGEALYKLVSDKQ 112
Score = 25.8 bits (50), Expect(3) = 1e-027
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3 / +2
Query: 1476 RKHISIIAVDSVK 1438
RKHI +IAVDSV+
Sbjct: 473 RKHIIVIAVDSVQ 511
>gb|CD212848.1|CD212848 HS1_16_B05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_16_B05_A012 5', mRNA sequence
Length = 632
Score = 107 bits (229), Expect(2) = 2e-027
Identities = 39/65 (60%), Positives = 56/65 (86%)
Frame = -2 / +1
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKM 1646
F C + E FG+TLIEAA +GLP++AT+NG PV+I++VL+NG+LVDPH+Q+ I +ALYK+
Sbjct: 385 FINCAFIEPFGLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIGEALYKL 564
Query: 1645 LSEKQ 1631
+S+KQ
Sbjct: 565 VSDKQ 579
Score = 37.7 bits (76), Expect(2) = 2e-027
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3 / +1
Query: 1623 SRCRENGLKNIHQFS 1579
+RCR+NGLKNIHQFS
Sbjct: 586 TRCRQNGLKNIHQFS 630
>gb|CX615040.1|CX615040 GABR1_17_F12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_F12_A002 5', mRNA sequence
Length = 775
Score = 125 bits (267), Expect = 3e-027
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = -2 / +3
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKM 1646
F YFEQFGVTLIEAAM+GLP+IATKNGAPVEI QVL NGLLVDPHDQ+AIADALYK+
Sbjct: 585 FVNVAYFEQFGVTLIEAAMNGLPIIATKNGAPVEINQVLNNGLLVDPHDQNAIADALYKL 764
Query: 1645 LSE 1637
LS+
Sbjct: 765 LSD 773
>gb|BG488446.1|BG488446 RHIZ2_63_G11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 41/83 (49%), Positives = 61/83 (73%)
Frame = -3 / +1
Query: 1476 RKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVIVRTGML 1297
RKHI +IAVDSV+ D +Q+I++ EA+ +GS GFVLST+ I+E+ ++++ G+
Sbjct: 211 RKHIIVIAVDSVQDADFVQVIKSIFEASSNERSNGSVGFVLSTARAISEIHALLISGGIE 390
Query: 1296 PTDFDAFICNSGSDIYYPLQSSD 1228
+DFDAFICNSGSD+ YP +S+
Sbjct: 391 ASDFDAFICNSGSDLCYPSSNSE 459
Score = 38.6 bits (78), Expect(2) = 2e-026
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 1251 YYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGG 1153
Y S D+ S + + F +D +Y S IEYRWGG
Sbjct: 439 YPSSNSEDMLSPAELPFMIDLDYHSQIEYRWGG 537
>gb|CL180611.1|CL180611 104_390_10896144_116_31930_288 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896144, DNA
sequence
Length = 560
Score = 66.1 bits (138), Expect(3) = 1e-021
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = -3 / +3
Query: 414 FGLKSLLMDTSNCTDGTNLFKC***KHFVEVFSANKLPIYKVHTF 280
FG K ++M+T CTD TNL KC** KHFVE + N+LPIY HTF
Sbjct: 114 FGAKIMIMETYLCTDETNLVKC**GKHFVETLT*NQLPIY*AHTF 248
Score = 65.2 bits (136), Expect(4) = 5e-025
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +3 / -3
Query: 282 KCELCILEACLLKILPQNVFTINI*TNLFRLYSWMYPLTSSSIQRNLQCGIQG 440
KCEL ILEA + + PQNV+ INI* NLFRLY M PL+ S+Q+ + G +G
Sbjct: 246 KCELSILEAGFMSMFPQNVYPINI*PNLFRLYRGMSPLS*FSLQKFSELGCKG 88
Score = 49.6 bits (102), Expect(4) = 5e-025
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 469 TTHIH*MTGRQNRTFPIEWK 528
TTHI *MTGRQNRTFPIEWK
Sbjct: 63 TTHID*MTGRQNRTFPIEWK 4
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 528 FPFYWKCPILPASHLMYVCG 469
FPFYWK PILPASHL+ VCG
Sbjct: 4 FPFYWKRPILPASHLINVCG 63
Score = 33.6 bits (67), Expect(4) = 5e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 423 QCGIQGNVIHNPCRDH 470
+ G+QG VIH PCRDH
Sbjct: 106 RAGMQGIVIHQPCRDH 59
Score = 28.6 bits (56), Expect(3) = 1e-021
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 469 WSLHGL*MTFPWIP 428
WSLHG *MT P IP
Sbjct: 60 WSLHG**MTIPCIP 101
Score = 23.5 bits (45), Expect(4) = 5e-025
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / -3
Query: 230 KPLDDCTVIRCSTLKRWK 283
K ++ C VI ST+K WK
Sbjct: 300 KSVEVCAVIISSTMK*WK 247
>gb|CL167624.1|CL167624 104_364_10810209_116_31803_273 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810209, DNA
sequence
Length = 645
Score = 79.9 bits (168), Expect(2) = 2e-024
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = -2 / +2
Query: 1786 LIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKMLSEK 1634
L++AA +GLPV+ATKNG PV+I + L NGLLVDPHD AI +AL +L++K
Sbjct: 161 LVQAAAYGLPVVATKNGGPVDIIKALHNGLLVDPHDAAAITEALLSLLADK 313
Score = 55.6 bits (115), Expect(2) = 2e-024
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -3 / +2
Query: 1617 CRENGLKNIHQFSWPEHCKNYLSRISS 1537
CR NGL+NIH+FSWP HC+ YLS +++
Sbjct: 329 CRRNGLRNIHRFSWPHHCRLYLSHVAA 409
>gb|CD212733.1|CD212733 HS1_16_B05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_16_B05_A012 3', mRNA sequence
Length = 606
Score = 114 bits (243), Expect = 5e-024
Identities = 42/80 (52%), Positives = 58/80 (72%)
Frame = -3 / +2
Query: 867 WGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDS 688
WG+EL N V+VGE GD+DYE L GG+HKT+I+KG FNT N++H R Y QDVV+L+
Sbjct: 2 WGVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEK 181
Query: 687 SNIIGIEGFSTGDIRSAMQQ 628
I IEG+ +++SA++Q
Sbjct: 182 QGIASIEGYGPDNLKSALRQ 241
>gb|CW349038.1|CW349038 fsbb001f009l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f009l06, DNA
sequence
Length = 741
Score = 62.5 bits (130), Expect(3) = 9e-024
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = -3 / +3
Query: 885 RYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVK 766
RYL +RWG+ + N +I GE GD+D EE+ GLHKTVIV+
Sbjct: 621 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVR 740
Score = 54.7 bits (113), Expect(3) = 9e-024
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3 / +2
Query: 996 ELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALR 883
E+++ +R++ LRCH +Y ATRL V+P+ ASRSQALR
Sbjct: 395 EMRERLRMRGLRCHIMYCRNATRLQVVPLLASRSQALR 508
Score = 39.6 bits (80), Expect(3) = 9e-024
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3 / +1
Query: 1293 TDFDAFICNSGSDIYYP 1243
TDFDA IC SGS++YYP
Sbjct: 31 TDFDALICGSGSEVYYP 81
>gb|BF422126.1|BF422126 FM1_12_B10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 492
Score = 83.1 bits (175), Expect(3) = 9e-024
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = -3 / +1
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHP 1519
+RCR+NGLKNIHQFSWPEHCKNYL+R+ +L PRHP
Sbjct: 94 TRCRQNGLKNIHQFSWPEHCKNYLARVVTLKPRHP 198
Score = 46.9 bits (96), Expect(3) = 9e-024
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = -2 / +1
Query: 1708 ENGLLVDPHDQHAIADALYKMLSEKQ 1631
+NG+LVDPH+Q+ I +ALYK++S+KQ
Sbjct: 10 DNGILVDPHNQNEIGEALYKLVSDKQ 87
Score = 25.4 bits (49), Expect(3) = 9e-024
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 1476 RKHISIIAVDSV 1441
RKHI +IAVDSV
Sbjct: 448 RKHIIVIAVDSV 483
>gb|BG054057.1|BG054057 OV2_1_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 585
Score = 111 bits (237), Expect = 4e-023
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = -3 / +2
Query: 981 MRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEE 802
+R++ LRCH +Y ATRL V+P+ ASRSQALRYL +RWG+ + N +I GE GD+D EE
Sbjct: 5 LRMRGLRCHIMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLITGEHGDTDLEE 184
Query: 801 LFGGLHKTVIVKG 763
+ GLHKTVIV+G
Sbjct: 185 MLSGLHKTVIVRG 223
>gb|CW436823.1|CW436823 fsbb001f153j23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f153j23, DNA
sequence
Length = 375
Score = 79.9 bits (168), Expect(2) = 3e-022
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = -2 / -3
Query: 1786 LIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKMLSEK 1634
L++AA +GLPV+ATKNG PV+I + L NGLLVDPHD AI +AL +L++K
Sbjct: 226 LVQAAAYGLPVVATKNGGPVDIIKALHNGLLVDPHDAAAITEALLSLLADK 74
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 1617 CRENGLKNIHQFSWPEHCK 1561
CR NGL+NIH+FSWP HC+
Sbjct: 58 CRRNGLRNIHRFSWPHHCR 2
>gb|AW672444.1|AW672444 LG1_359_C11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 591
Score = 105 bits (224), Expect = 2e-021
Identities = 39/95 (41%), Positives = 65/95 (68%)
Frame = -3 / +3
Query: 1053 STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLS 874
S +C A+ V + + + +++ +R++ RC+ +Y TRL+VIP+ ASR +ALRYLS
Sbjct: 9 SVHCHAYAVAGASKVKKVDSIRQSLRMRGFRCNLVYTRACTRLNVIPLSASRPRALRYLS 188
Query: 873 IRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIV 769
I+WGI+L V+VG+ GD+D E + GLH+T+++
Sbjct: 189 IQWGIDLDKVAVLVGDKGDTDRERVLPGLHRTLVL 293
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,298,283,831
Number of Sequences: 832831
Number of extensions: 34469639
Number of successful extensions: 141371
Number of sequences better than 1.0e-020: 46
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 64205984328
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)