TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067213.2.1
(924 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN145002.1|CN145002 WOUND1_26_E07.b2_A002 Wounded leaves... 474 e-154
gb|CF488456.1|CF488456 POL1_50_C12.b1_A002 Pollen Sorghum b... 296 e-100
gb|CX612583.1|CX612583 GABR1_3_F09.b1_A002 GA- or brassinol... 329 5e-089
gb|CF488534.1|CF488534 POL1_50_C12.g1_A002 Pollen Sorghum b... 300 2e-080
gb|AW563838.1|AW563838 LG1_272_B09.b1_A002 Light Grown 1 (L... 290 2e-077
gb|CD228570.1|CD228570 CCC1_8_A06.g1_A007 Callus culture/ce... 273 2e-072
gb|BM324254.1|BM324254 PIC1_26_B07.b1_A002 Pathogen-infecte... 264 1e-069
gb|CD227944.1|CD227944 CCC1_56_E05.g1_A007 Callus culture/c... 244 2e-063
gb|CD227672.1|CD227672 CCC1_53_D08.b1_A007 Callus culture/c... 239 5e-062
gb|CN139974.1|CN139974 OX1_33_F07.b1_A002 Oxidatively-stres... 225 7e-058
gb|CW059703.1|CW059703 104_302_10519473_114_30162 Sorghum m... 116 5e-053
gb|CL195616.1|CL195616 104_421_10942498_116_32315_045 Sorgh... 116 5e-053
gb|CX612665.1|CX612665 GABR1_3_F09.g1_A002 GA- or brassinol... 200 3e-050
gb|CN145086.1|CN145086 WOUND1_26_E07.g1_A002 Wounded leaves... 197 3e-049
gb|BG159361.1|BG159361 OV2_6_G12.g1_A002 Ovary 2 (OV2) Sorg... 183 3e-045
gb|CW059704.1|CW059704 104_302_10519473_115_30168 Sorghum m... 116 5e-043
gb|CX608003.1|CX608003 ANR1_32_C02.b1_A002 Anaerobic roots ... 156 3e-040
gb|AW283437.3|AW283437 LG1_272_B09.g1_A002 Light Grown 1 (L... 100 5e-039
gb|AW564073.1|AW564073 LG1_282_A07.b1_A002 Light Grown 1 (L... 159 5e-038
gb|CW070747.1|CW070747 104_322_10590981_116_30543 Sorghum m... 86 2e-029
gb|BM328755.1|BM328755 PIC1_26_B07.g1_A002 Pathogen-infecte... 129 5e-029
gb|CX608084.1|CX608084 ANR1_32_C02.g1_A002 Anaerobic roots ... 128 1e-028
gb|CW098783.1|CW098783 104_465_11003193_148_34368_039 Sorgh... 67 6e-028
gb|BG465944.1|BG465944 RHIZ2_46_E09.g1_A003 Rhizome2 (RHIZ2... 116 4e-025
gb|BG101804.1|BG101804 RHIZ2_22_F05.g1_A003 Rhizome2 (RHIZ2... 116 7e-025
gb|BG102344.1|BG102344 RHIZ2_22_F05.b1_A003 Rhizome2 (RHIZ2... 115 1e-024
gb|CD228545.1|CD228545 CCC1_8_A06.b1_A007 Callus culture/ce... 114 2e-024
gb|CN140055.1|CN140055 OX1_33_F07.g1_A002 Oxidatively-stres... 84 5e-024
gb|CW432657.1|CW432657 fsbb001f147h20k0 Sorghum methylation... 107 2e-022
gb|BG159615.1|BG159615 OV2_6_G12.b1_A002 Ovary 2 (OV2) Sorg... 105 7e-022
>gb|CN145002.1|CN145002 WOUND1_26_E07.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_E07_A002 3', mRNA sequence
Length = 794
Score = 474 bits (1030), Expect(4) = e-154
Identities = 197/199 (98%), Positives = 199/199 (100%)
Frame = -2 / +1
Query: 818 TFYITWWFIHFVDGFFSPIYAQLGINIFGLGFVTSVTFIFLIGVFMSSWLGASVLSLGEW 639
TFYITWWFIHFVDGFFSPIYAQLGINIFGLGF+TSVTFIFLIGVFMSSW+GASVLSLGEW
Sbjct: 1 TFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSVTFIFLIGVFMSSWVGASVLSLGEW 180
Query: 638 IIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYS 459
IIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYS
Sbjct: 181 IIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYS 360
Query: 458 GQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQM 279
GQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQM
Sbjct: 361 GQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQM 540
Query: 278 ILGDRTGPSRS*SCYEPFV 222
ILGDRTGPSRS*SCYEPFV
Sbjct: 541 ILGDRTGPSRS*SCYEPFV 597
Score = 455 bits (988), Expect(3) = e-143
Identities = 171/181 (94%), Positives = 174/181 (96%)
Frame = -1 / +3
Query: 789 FC*WILLSNLCSTGNQHIRSWLCHICYFHIFDRSLYVILAWGICP*PWRVDY*AHASCSS 610
FC*WILLSNLCSTGNQHIRSWL HICYFHIFD SLYVIL W ICP*PWRVDY*AHASCSS
Sbjct: 30 FC*WILLSNLCSTGNQHIRSWLHHICYFHIFDWSLYVILGWSICP*PWRVDY*AHASCSS 209
Query: 609 YLQCIEAN*CCNITRSEQTGVQGSGHHKASSCWRICVWFHHIVSIPPELFWSRRSLLRLC 430
YLQCIEAN*CCNITRSEQTG+QGSGHHKASSCWRICVWFH+IVSIPPELFWSRRSLL LC
Sbjct: 210 YLQCIEAN*CCNITRSEQTGIQGSGHHKASSCWRICVWFHYIVSIPPELFWSRRSLLCLC 389
Query: 429 PNEPSLHW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYVDAPNSVNPRPTDDPWGQNRTKQ 250
NEPSLHW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYV+APNSVNPRP DDPWGQNRTKQ
Sbjct: 390 ANEPSLHW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYVNAPNSVNPRPADDPWGQNRTKQ 569
Query: 249 K 247
K
Sbjct: 570 K 572
Score = 448 bits (972), Expect(4) = e-146
Identities = 195/198 (98%), Positives = 196/198 (98%)
Frame = +1 / -1
Query: 223 TKGS*QLQLLLGPVLSPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKI 402
TKGS*QLQLLLGPVLSPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKI
Sbjct: 596 TKGS*QLQLLLGPVLSPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKI 417
Query: 403 SPM*RWFVGT*TQ*RSS*PE*LWRDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAA 582
SPM*RWFVGT*TQ*RSS*PE*LWRDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAA
Sbjct: 416 SPM*RWFVGT*TQ*RSS*PE*LWRDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAA 237
Query: 583 LICFDAL*I*RTRGMRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A* 762
LICFDAL*I*RTRGMRLIIHSPRLRTDAP+QDDIKTPIKNMKVTDV KPRPNMLIPS*A*
Sbjct: 236 LICFDAL*I*RTRGMRLIIHSPRLRTDAPTQDDIKTPIKNMKVTDVMKPRPNMLIPS*A* 57
Query: 763 IGEKNPSTK*MNHQVM*N 816
IGEKNPSTK MNHQVM*N
Sbjct: 56 IGEKNPSTKWMNHQVM*N 3
Score = 433 bits (940), Expect(3) = e-135
Identities = 176/200 (88%), Positives = 183/200 (91%)
Frame = +3 / -3
Query: 216 KVNKGLVXXXXXXXXXXVPKDHLWVEG*QNLGHRHTTRYNNFDAFTHRKIWPYDIL*IHH 395
+++KGLV VPKDHL VEG*QNLGH HTTRYNNFDAFTHRKIWPYDIL*IHH
Sbjct: 603 RLHKGLVAASTSAWSGSVPKDHLRVEG*QNLGH*HTTRYNNFDAFTHRKIWPYDIL*IHH 424
Query: 396 EDITNVKMVRWDIDAVKIFLTRITLEGY*RCDETKRIFSNTRMPYDDHFLERLFVLIW*Y 575
EDITNVKMVRW ID VKIFLTRITLEGY*RC+ETKRIFSNTRMPYDDHFLE LFVLIW*Y
Sbjct: 423 EDITNVKMVRWHIDTVKIFLTRITLEGY*RCNETKRIFSNTRMPYDDHFLECLFVLIW*Y 244
Query: 576 CSTNLLRCIVDMTNKRHALNNPLAKAKDRCPKPR*HKDSDQKYESNRCDKAKTEYVDSQL 755
CSTNLLRCIVDMTNKRHALNNPLAKAKDRC PR*HKDS+QKYESNRCD+AKTEYVDSQL
Sbjct: 243 CSTNLLRCIVDMTNKRHALNNPLAKAKDRCSNPR*HKDSNQKYESNRCDEAKTEYVDSQL 64
Query: 756 SIDWREESINKMNEPPGDVE 815
SIDWREESINKM+EPPGDVE
Sbjct: 63 SIDWREESINKMDEPPGDVE 4
Score = 409 bits (888), Expect(3) = e-128
Identities = 180/192 (93%), Positives = 182/192 (94%)
Frame = +2 / -2
Query: 215 KGKQRARSSFSFCLVRFCPQGSSVGRGLTEFGASTYHQIQQFRCLHAQKDLAL*HPLNSP 394
K QRARSSF+FCLVRFCPQGSS GRGLTEFGA TYHQIQQFRCLHAQKDLAL*HPLNSP
Sbjct: 604 KVTQRARSSFNFCLVRFCPQGSSAGRGLTEFGALTYHQIQQFRCLHAQKDLAL*HPLNSP 425
Query: 395 *RYHQCKDGSLGHRRSKDLLDQNNSGGILTM**NQTHILQHEDAL**PLP*TPVCSDLVI 574
*RYHQCKDGSL HR SKDLLDQNNSGGILTM**NQTHILQHEDAL**PLP* PVCSDLVI
Sbjct: 424 *RYHQCKDGSLAHRHSKDLLDQNNSGGILTM**NQTHILQHEDAL**PLP*MPVCSDLVI 245
Query: 575 LQH*FASMHCRYDEQEACA**STRQG*GQMPQAKMT*RLRSKI*K*QM*QSQDRIC*FPV 754
LQH*FASMHCRYDEQEACA**STRQG*GQM Q KMT*RL+SKI*K*QM* SQDRIC*FPV
Sbjct: 244 LQH*FASMHCRYDEQEACA**STRQG*GQMLQPKMT*RLQSKI*K*QM**SQDRIC*FPV 65
Query: 755 EHRLERRIHQQN 790
EHRLERRIHQQN
Sbjct: 64 EHRLERRIHQQN 29
Score = 284 bits (615), Expect(4) = e-110
Identities = 124/131 (94%), Positives = 125/131 (95%)
Frame = -3 / +2
Query: 616 FVISTMHRSKLVLQYHQIRTNRRSRKWSS*GILVLENMRLVSSHRQYPSRVILVKKIFTA 437
FVISTMHRSKLVLQYHQIRTNR SRKWSS*GILVLENMRLVS HRQYPSRVILVKKIFT
Sbjct: 203 FVISTMHRSKLVLQYHQIRTNRHSRKWSS*GILVLENMRLVSLHRQYPSRVILVKKIFTV 382
Query: 436 SMSQRTIFTLVISSW*IQRMS*GQIFLCVKASKLLYLVVCRCPKFCQPSTHR*SLGTEPD 257
SM QRTIFTLVISSW*IQRMS*GQIFLCVKASKLLYLVVC+CPKFCQPST R*SLGTEPD
Sbjct: 383 SMCQRTIFTLVISSW*IQRMS*GQIFLCVKASKLLYLVVCQCPKFCQPSTRR*SLGTEPD 562
Query: 256 QAEAEAATSPL 224
QAE EAATSPL
Sbjct: 563 QAEVEAATSPL 595
Score = 87.2 bits (184), Expect(4) = e-110
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -3 / +2
Query: 814 STSPGGSFILLMDSSLQSMLNWESTYSVLALSHLLLSYF*SE 689
STSPGGS ILLMDSSLQSMLNWESTYSVLA SHLLLSYF* E
Sbjct: 5 STSPGGSSILLMDSSLQSMLNWESTYSVLASSHLLLSYF*LE 130
Score = 69.8 bits (146), Expect(4) = e-154
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2 / +2
Query: 125 VGVVDSHGLIICWTLDHGLYFVLHPMQERSIS 30
V V DSHGL +CWTL HGLYFVLHPMQERSIS
Sbjct: 689 VDVGDSHGLTVCWTLYHGLYFVLHPMQERSIS 784
Score = 66.1 bits (138), Expect(4) = e-146
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / -3
Query: 31 EMLLSCIGCSTKYKPWSRVQQIIKPCESTTPT 126
EMLLSCIG STKYKPW RVQQ +KPCES T T
Sbjct: 783 EMLLSCIG*STKYKPWYRVQQTVKPCESPTST 688
Score = 55.6 bits (115), Expect(3) = e-135
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3 / -2
Query: 30 *DASFLHRMQHKVQTMVQSPANNQTV*VNY 119
*DASFLHR+++KVQTMVQSPAN+QT+ V Y
Sbjct: 784 *DASFLHRVKYKVQTMVQSPANSQTMRVTY 695
Score = 54.7 bits (113), Expect(3) = e-143
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -1 / +1
Query: 126 SWCS*LTRFDYLLDSGPWFVLCAASDARKKHLIS 25
S C *L FD LLDS PWFVLC + ARKKHLIS
Sbjct: 688 SRCR*LAWFDCLLDSVPWFVLCTSPYARKKHLIS 789
Score = 53.3 bits (110), Expect(3) = e-128
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 26 EMRCFFLASDAAQSTNHGPESSK*SNRVSQLHQL 127
+MRCFFLA QSTNHG ESSK SN S LH L
Sbjct: 788 DMRCFFLA*GEVQSTNHGTESSKQSNHASHLHLL 687
Score = 50.6 bits (104), Expect(4) = e-110
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / +3
Query: 130 IKLV*LTHTV*LFAGLWTMVCTLCCIRCKKEASHL 26
+K +*+T V*LFAGL TMVCTL CKKEASH+
Sbjct: 684 LK*M*VTRMV*LFAGLCTMVCTLYFTLCKKEASHI 788
Score = 41.8 bits (85), Expect(4) = e-146
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2 / -1
Query: 158 SLVCRTRGSLYENVNDHQHKG 220
SLVCRTRGSLYENV +Q KG
Sbjct: 662 SLVCRTRGSLYENVTSNQ*KG 600
Score = 41.4 bits (84), Expect(3) = e-143
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 200 *HFHTGYHEYGKLDCRFRAL 141
*HFHTGYHEYGKLD + L
Sbjct: 620 *HFHTGYHEYGKLDSEHKYL 679
Score = 38.6 bits (78), Expect(4) = e-154
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / +3
Query: 220 TFVLMIVNIFIQATTSTAN*T 158
TF+L+ NIFIQATTSTAN*T
Sbjct: 600 TFLLVASNIFIQATTSTAN*T 662
Score = 36.3 bits (73), Expect(3) = e-135
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +3 / -2
Query: 159 V*FAVLVVACMKMLTIISTKVNK 227
V*FAVLVVACMKML S KV +
Sbjct: 661 V*FAVLVVACMKMLLATSRKVTQ 593
Score = 36.3 bits (73), Expect(3) = e-128
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1 / -3
Query: 157 QSSLPYSW*PV*KC*RSSAQR*TKG 231
+SSLPYSW*PV*KC +R KG
Sbjct: 663 ESSLPYSW*PV*KCY*QPVERLHKG 589
Score = 35.4 bits (71), Expect(4) = e-110
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / +1
Query: 198 TFSYRLPRVRQTRL 157
TFSYRLPRVRQTRL
Sbjct: 622 TFSYRLPRVRQTRL 663
Score = 24.9 bits (48), Expect(4) = e-154
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 157 VDSEH*YLYIKL 122
+DSEH YLYIK+
Sbjct: 656 LDSEHKYLYIKV 691
Score = 24.9 bits (48), Expect(4) = e-146
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 120 TNLIYRY*CSESTV 161
+ LIYRY CSES++
Sbjct: 693 STLIYRYLCSESSL 652
>gb|CF488456.1|CF488456 POL1_50_C12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_50_C12_A002 3', mRNA sequence
Length = 564
Score = 296 bits (641), Expect(3) = e-100
Identities = 109/115 (94%), Positives = 112/115 (97%)
Frame = -1 / +3
Query: 591 AN*CCNITRSEQTGVQGSGHHKASSCWRICVWFHHIVSIPPELFWSRRSLLRLCPNEPSL 412
AN*CCNITRSEQTG+QGSGHHKASSCWRICVWFH+IVSIPPELFWSRRSLL LC NEPSL
Sbjct: 3 AN*CCNITRSEQTGIQGSGHHKASSCWRICVWFHYIVSIPPELFWSRRSLLCLCANEPSL 182
Query: 411 HW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYVDAPNSVNPRPTDDPWGQNRTKQK 247
HW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYV+APNSVNPRP DDPWGQNRTKQK
Sbjct: 183 HW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYVNAPNSVNPRPADDPWGQNRTKQK 347
Score = 295 bits (639), Expect(4) = 5e-096
Identities = 125/125 (100%), Positives = 125/125 (100%)
Frame = -2 / +1
Query: 593 KQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHL 414
KQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHL
Sbjct: 1 KQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHL 180
Query: 413 YIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQMILGDRTGPSRS*SCY 234
YIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQMILGDRTGPSRS*SCY
Sbjct: 181 YIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQMILGDRTGPSRS*SCY 360
Query: 233 EPFVY 219
EPFVY
Sbjct: 361 EPFVY 375
Score = 288 bits (623), Expect(4) = 6e-099
Identities = 123/123 (100%), Positives = 123/123 (100%)
Frame = +1 / -2
Query: 223 TKGS*QLQLLLGPVLSPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKI 402
TKGS*QLQLLLGPVLSPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKI
Sbjct: 371 TKGS*QLQLLLGPVLSPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKI 192
Query: 403 SPM*RWFVGT*TQ*RSS*PE*LWRDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAA 582
SPM*RWFVGT*TQ*RSS*PE*LWRDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAA
Sbjct: 191 SPM*RWFVGT*TQ*RSS*PE*LWRDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAA 12
Query: 583 LIC 591
LIC
Sbjct: 11 LIC 3
Score = 281 bits (607), Expect(3) = 4e-090
Identities = 119/126 (94%), Positives = 120/126 (95%)
Frame = +2 / -3
Query: 215 KGKQRARSSFSFCLVRFCPQGSSVGRGLTEFGASTYHQIQQFRCLHAQKDLAL*HPLNSP 394
KG QRARSSF+FCLVRFCPQGSS GRGLTEFGA TYHQIQQFRCLHAQKDLAL*HPLNSP
Sbjct: 379 KGTQRARSSFNFCLVRFCPQGSSAGRGLTEFGALTYHQIQQFRCLHAQKDLAL*HPLNSP 200
Query: 395 *RYHQCKDGSLGHRRSKDLLDQNNSGGILTM**NQTHILQHEDAL**PLP*TPVCSDLVI 574
*RYHQCKDGSL HR SKDLLDQNNSGGILTM**NQTHILQHEDAL**PLP* PVCSDLVI
Sbjct: 199 *RYHQCKDGSLAHRHSKDLLDQNNSGGILTM**NQTHILQHEDAL**PLP*MPVCSDLVI 20
Query: 575 LQH*FA 592
LQH*FA
Sbjct: 19 LQH*FA 2
Score = 267 bits (577), Expect(3) = 3e-084
Identities = 117/125 (93%), Positives = 118/125 (94%)
Frame = -3 / +2
Query: 592 SKLVLQYHQIRTNRRSRKWSS*GILVLENMRLVSSHRQYPSRVILVKKIFTASMSQRTIF 413
SKLVLQYHQIRTNR SRKWSS*GILVLENMRLVS HRQYPSRVILVKKIFT SM QRTIF
Sbjct: 2 SKLVLQYHQIRTNRHSRKWSS*GILVLENMRLVSLHRQYPSRVILVKKIFTVSMCQRTIF 181
Query: 412 TLVISSW*IQRMS*GQIFLCVKASKLLYLVVCRCPKFCQPSTHR*SLGTEPDQAEAEAAT 233
TLVISSW*IQRMS*GQIFLCVKASKLLYLVVC+CPKFCQPST R*SLGTEPDQAE EAAT
Sbjct: 182 TLVISSW*IQRMS*GQIFLCVKASKLLYLVVCQCPKFCQPSTRR*SLGTEPDQAEVEAAT 361
Query: 232 SPLFT 218
SPL T
Sbjct: 362 SPLCT 376
Score = 263 bits (569), Expect(3) = 2e-083
Identities = 108/126 (85%), Positives = 111/126 (88%)
Frame = +3 / -1
Query: 216 KVNKGLVXXXXXXXXXXVPKDHLWVEG*QNLGHRHTTRYNNFDAFTHRKIWPYDIL*IHH 395
+V+KGLV VPKDHL VEG*QNLGH HTTRYNNFDAFTHRKIWPYDIL*IHH
Sbjct: 378 RVHKGLVAASTSAWSGSVPKDHLRVEG*QNLGH*HTTRYNNFDAFTHRKIWPYDIL*IHH 199
Query: 396 EDITNVKMVRWDIDAVKIFLTRITLEGY*RCDETKRIFSNTRMPYDDHFLERLFVLIW*Y 575
EDITNVKMVRW ID VKIFLTRITLEGY*RC+ETKRIFSNTRMPYDDHFLE LFVLIW*Y
Sbjct: 198 EDITNVKMVRWHIDTVKIFLTRITLEGY*RCNETKRIFSNTRMPYDDHFLECLFVLIW*Y 19
Query: 576 CSTNLL 593
CSTNLL
Sbjct: 18 CSTNLL 1
Score = 69.8 bits (146), Expect(3) = e-100
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2 / +2
Query: 125 VGVVDSHGLIICWTLDHGLYFVLHPMQERSIS 30
V V DSHGL +CWTL HGLYFVLHPMQERSIS
Sbjct: 464 VDVGDSHGLTVCWTLYHGLYFVLHPMQERSIS 559
Score = 66.1 bits (138), Expect(4) = 6e-099
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / -1
Query: 31 EMLLSCIGCSTKYKPWSRVQQIIKPCESTTPT 126
EMLLSCIG STKYKPW RVQQ +KPCES T T
Sbjct: 558 EMLLSCIG*STKYKPWYRVQQTVKPCESPTST 463
Score = 55.6 bits (115), Expect(3) = 4e-090
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3 / -3
Query: 30 *DASFLHRMQHKVQTMVQSPANNQTV*VNY 119
*DASFLHR+++KVQTMVQSPAN+QT+ V Y
Sbjct: 559 *DASFLHRVKYKVQTMVQSPANSQTMRVTY 470
Score = 54.7 bits (113), Expect(4) = 5e-096
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -1 / +1
Query: 126 SWCS*LTRFDYLLDSGPWFVLCAASDARKKHLIS 25
S C *L FD LLDS PWFVLC + ARKKHLIS
Sbjct: 463 SRCR*LAWFDCLLDSVPWFVLCTSPYARKKHLIS 564
Score = 53.3 bits (110), Expect(3) = 2e-083
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +2 / -2
Query: 26 EMRCFFLASDAAQSTNHGPESSK*SNRVSQLHQL 127
+MRCFFLA QSTNHG ESSK SN S LH L
Sbjct: 563 DMRCFFLA*GEVQSTNHGTESSKQSNHASHLHLL 462
Score = 50.6 bits (104), Expect(3) = 3e-084
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / +3
Query: 130 IKLV*LTHTV*LFAGLWTMVCTLCCIRCKKEASHL 26
+K +*+T V*LFAGL TMVCTL CKKEASH+
Sbjct: 459 LK*M*VTRMV*LFAGLCTMVCTLYFTLCKKEASHI 563
Score = 41.8 bits (85), Expect(4) = 6e-099
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2 / -2
Query: 158 SLVCRTRGSLYENVNDHQHKG 220
SLVCRTRGSLYENV +Q KG
Sbjct: 437 SLVCRTRGSLYENVTSNQ*KG 375
Score = 41.4 bits (84), Expect(3) = e-100
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 200 *HFHTGYHEYGKLDCRFRAL 141
*HFHTGYHEYGKLD + L
Sbjct: 395 *HFHTGYHEYGKLDSEHKYL 454
Score = 36.3 bits (73), Expect(4) = 5e-096
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3 / +3
Query: 217 FVLMIVNIFIQATTSTAN*T 158
F+L+ NIFIQATTSTAN*T
Sbjct: 378 FLLVASNIFIQATTSTAN*T 437
Score = 36.3 bits (73), Expect(3) = 4e-090
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1 / -1
Query: 157 QSSLPYSW*PV*KC*RSSAQR*TKG 231
+SSLPYSW*PV*KC +R KG
Sbjct: 438 ESSLPYSW*PV*KCY*QPVERVHKG 364
Score = 35.4 bits (71), Expect(3) = 3e-084
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / +1
Query: 198 TFSYRLPRVRQTRL 157
TFSYRLPRVRQTRL
Sbjct: 397 TFSYRLPRVRQTRL 438
Score = 34.1 bits (68), Expect(3) = 2e-083
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 159 V*FAVLVVACMKMLTIISTK 218
V*FAVLVVACMKML S K
Sbjct: 436 V*FAVLVVACMKMLLATSRK 377
Score = 24.9 bits (48), Expect(4) = 5e-096
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 157 VDSEH*YLYIKL 122
+DSEH YLYIK+
Sbjct: 431 LDSEHKYLYIKV 466
Score = 24.9 bits (48), Expect(4) = 6e-099
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 120 TNLIYRY*CSESTV 161
+ LIYRY CSES++
Sbjct: 468 STLIYRYLCSESSL 427
>gb|CX612583.1|CX612583 GABR1_3_F09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_F09_A002 3', mRNA sequence
Length = 724
Score = 329 bits (712), Expect = 5e-089
Identities = 137/178 (76%), Positives = 155/178 (87%)
Frame = -2 / +3
Query: 776 FFSPIYAQLGINIFGLGFVTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNA 597
FFSPIYA LGI IFGLGFVTS++FIF++GVFMSSWLGAS+L LGEW IKRMP VRHIY+A
Sbjct: 3 FFSPIYAHLGIKIFGLGFVTSISFIFVVGVFMSSWLGASILGLGEWFIKRMPFVRHIYDA 182
Query: 596 SKQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNH 417
SKQISAAISPDQNK AFKEVVIIRHPR+GEYAFGFITS V LQ YS +E +YCVYVPTNH
Sbjct: 183 SKQISAAISPDQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQGYSSEEKMYCVYVPTNH 362
Query: 416 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQMILGDRTGPSRS* 243
LYIGDIF+V+S DVIRPN+SVREGIEIVVS G +MPQ+LS L+ + +R +RS*
Sbjct: 363 LYIGDIFLVSSSDVIRPNMSVREGIEIVVSVGTTMPQVLSILETEPNQLNRIRSTRS* 536
Score = 176 bits (378), Expect = 6e-043
Identities = 76/157 (48%), Positives = 108/157 (68%)
Frame = +3 / -3
Query: 306 LGHRHTTRYNNFDAFTHRKIWPYDIL*IHHEDITNVKMVRWDIDAVKIFLTRITLEGY*R 485
L HR R NNF+AF +R + P + * + + N++MV W+I+ V +F TRITL+ R
Sbjct: 473 LRHRRAHRDNNFNAFANRHVRPNHVT*ADQKYVPNIEMVGWNINTVHLFFTRITLK*NFR 294
Query: 486 CDETKRIFSNTRMPYDDHFLERLFVLIW*YCSTNLLRCIVDMTNKRHALNNPLAKAKDRC 665
D++K IF+N+ +P DDHFLE + VLI * ST+LLRCI++M NK H+ PL++ KDRC
Sbjct: 293 SDKSKCIFANSWVPNDDHFLECMLVLIR*NGSTDLLRCIINMANKWHSFYEPLSETKDRC 114
Query: 666 PKPR*HKDSDQKYESNRCDKAKTEYVDSQLSIDWREE 776
P+PR*H+ ++ + E RC K K +Y DSQ+SI W E+
Sbjct: 113 PQPR*HEYTNHENERYRCYKTKPKYFDSQVSIYWGEK 3
Score = 167 bits (359), Expect = 2e-040
Identities = 72/161 (44%), Positives = 100/161 (62%)
Frame = -1 / +2
Query: 777 ILLSNLCSTGNQHIRSWLCHICYFHIFDRSLYVILAWGICP*PWRVDY*AHASCSSYLQC 598
+ L N+CS GNQ+I +W C+I FH ++VILA GI P RV + +A CS YL C
Sbjct: 2 LFLPNICSLGNQNIWAWFCNIDIFHFRGWCIHVILAGGIYPWSRRVVHKTNAICSPYL*C 181
Query: 597 IEAN*CCNITRSEQTGVQGSGHHKASSCWRICVWFHHIVSIPPELFWSRRSLLRLCPNEP 418
I AN CC+ T S+Q +QGSGHH A WRIC+W +H S LF R+ +L LC N+P
Sbjct: 182 I*ANQCCHFT*SKQACIQGSGHH*APKNWRICIWIYHFGSSTSGLF**RKDVLCLCSNQP 361
Query: 417 SLHW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYVDAPNSVN 295
SL+W ++ G+ K A+ C+ RH NCC+ + DA + ++
Sbjct: 362 SLYWGHISGQLK*RD*AEHVCSRRH*NCCLCGHDDASSIID 484
Score = 160 bits (344), Expect(2) = 5e-056
Identities = 70/99 (70%), Positives = 78/99 (78%)
Frame = +1 / -1
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAALICFDAL*I*RTRGMRLIIHSPRLR 657
T +V+ PNAYSP GCLMMTTSLNACLF*SG++AALIC DA *I RT G+R + HSPR R
Sbjct: 301 TSEVINPNAYSPILGCLMMTTSLNACLF*SGEMAALICLDAS*IWRTNGIRFMNHSPRPR 122
Query: 658 TDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A*IGEK 774
DAPSQDD+ TP MK DVTKP PN+LIP *A IGEK
Sbjct: 121 IDAPSQDDMNTPTTKMKDIDVTKPSPNILIPK*AYIGEK 5
Score = 102 bits (217), Expect = 9e-021
Identities = 72/155 (46%), Positives = 85/155 (54%)
Frame = +2 / -2
Query: 311 ASTYHQIQQFRCLHAQKDLAL*HPLNSP*RYHQCKDGSLGHRRSKDLLDQNNSGGILTM* 490
AS+ Q QQF+CL Q A L+ P Q +DG L H+ S L NN L *
Sbjct: 468 ASSCPQRQQFQCLREQTCSA*SRHLS*PEICPQYRDGWLEHKHSTSFLH*NNPEVELPK* 289
Query: 491 *NQTHILQHEDAL**PLP*TPVCSDLVILQH*FASMHCRYDEQEACA**STRQG*GQMPQ 670
* Q HI Q A **PLP* C D V QH*FA MH +Y EQ A *+T + G MP
Sbjct: 288 *IQMHIRQFLGA***PLP*MHACFDQVKWQH*FA*MHHKYGEQMAFVL*TTLRDQG*MPP 109
Query: 671 AKMT*RLRSKI*K*QM*QSQDRIC*FPVEHRLERR 775
AKMT* + + *K M Q+Q +I *FP EH L R+
Sbjct: 108 AKMT*IHQPRK*KISMLQNQAQIF*FPSEHILGRK 4
Score = 79.4 bits (167), Expect(2) = 5e-056
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +1 / -1
Query: 289 SRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ 441
SR+D GI +P +TTISMPSRT+ FGL+TS E T +SP+*RW VGT*TQ
Sbjct: 490 SRIDNT*GIVVPTETTISMPSRTDMFGLITSLELTRNMSPI*RWLVGT*TQ 338
>gb|CF488534.1|CF488534 POL1_50_C12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_50_C12_A002 5', mRNA sequence
Length = 636
Score = 300 bits (649), Expect = 2e-080
Identities = 123/125 (98%), Positives = 125/125 (100%)
Frame = -2 / +1
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF
Sbjct: 262 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 441
Query: 722 VTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 543
+TSVTFIFLIGVFMSSW+GASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK
Sbjct: 442 ITSVTFIFLIGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 621
Query: 542 EVVII 528
EVVII
Sbjct: 622 EVVII 636
Score = 286 bits (619), Expect = 3e-076
Identities = 116/125 (92%), Positives = 120/125 (96%)
Frame = +3 / -1
Query: 528 YDDHFLERLFVLIW*YCSTNLLRCIVDMTNKRHALNNPLAKAKDRCPKPR*HKDSDQKYE 707
YDDHFLE LFVLIW*YCSTNLLRCIVDMTNKRHALNNPLAKAKDRC PR*HKDS+QKYE
Sbjct: 636 YDDHFLECLFVLIW*YCSTNLLRCIVDMTNKRHALNNPLAKAKDRCSNPR*HKDSNQKYE 457
Query: 708 SNRCDKAKTEYVDSQLSIDWREESINKMNEPPGDVERYCYGEENYTSSHELL*SPTADNL 887
SNRCD+AKTEYVDSQLSIDWREESINKM+EPPGDVE YCYGEENYTSSHELL*SPT D+L
Sbjct: 456 SNRCDEAKTEYVDSQLSIDWREESINKMDEPPGDVECYCYGEENYTSSHELL*SPTTDDL 277
Query: 888 MESLA 902
MESLA
Sbjct: 276 MESLA 262
Score = 278 bits (602), Expect = 7e-074
Identities = 122/125 (97%), Positives = 123/125 (98%)
Frame = +1 / -2
Query: 529 MMTTSLNACLF*SGDIAALICFDAL*I*RTRGMRLIIHSPRLRTDAPSQDDIKTPIKNMK 708
MMTTSLNACLF*SGDIAALICFDAL*I*RTRGMRLIIHSPRLRTDAP+QDDIKTPIKNMK
Sbjct: 635 MMTTSLNACLF*SGDIAALICFDAL*I*RTRGMRLIIHSPRLRTDAPTQDDIKTPIKNMK 456
Query: 709 VTDVTKPRPNMLIPS*A*IGEKNPSTK*MNHQVM*NVIAMGKRITHPVMNFFEAQLRTTL 888
VTDV KPRPNMLIPS*A*IGEKNPSTK MNHQVM*NVIAMGKRITHPVMNFFEAQLRTTL
Sbjct: 455 VTDVMKPRPNMLIPS*A*IGEKNPSTKWMNHQVM*NVIAMGKRITHPVMNFFEAQLRTTL 276
Query: 889 WKASR 903
WKASR
Sbjct: 275 WKASR 261
Score = 214 bits (461), Expect(2) = 1e-058
Identities = 82/87 (94%), Positives = 83/87 (95%)
Frame = -1 / +3
Query: 789 FC*WILLSNLCSTGNQHIRSWLCHICYFHIFDRSLYVILAWGICP*PWRVDY*AHASCSS 610
FC*WILLSNLCSTGNQHIRSWL HICYFHIFD SLYVIL W ICP*PWRVDY*AHASCSS
Sbjct: 375 FC*WILLSNLCSTGNQHIRSWLHHICYFHIFDWSLYVILGWSICP*PWRVDY*AHASCSS 554
Query: 609 YLQCIEAN*CCNITRSEQTGVQGSGHH 529
YLQCIEAN*CCNITRSEQTG+QGSGHH
Sbjct: 555 YLQCIEAN*CCNITRSEQTGIQGSGHH 635
Score = 177 bits (380), Expect(2) = 2e-057
Identities = 82/87 (94%), Positives = 83/87 (95%)
Frame = +2 / -3
Query: 530 **PLP*TPVCSDLVILQH*FASMHCRYDEQEACA**STRQG*GQMPQAKMT*RLRSKI*K 709
**PLP* PVCSDLVILQH*FASMHCRYDEQEACA**STRQG*GQM Q KMT*RL+SKI*K
Sbjct: 634 **PLP*MPVCSDLVILQH*FASMHCRYDEQEACA**STRQG*GQMLQPKMT*RLQSKI*K 455
Query: 710 *QM*QSQDRIC*FPVEHRLERRIHQQN 790
*QM* SQDRIC*FPVEHRLERRIHQQN
Sbjct: 454 *QM**SQDRIC*FPVEHRLERRIHQQN 374
Score = 134 bits (288), Expect(2) = 2e-045
Identities = 65/71 (91%), Positives = 65/71 (91%)
Frame = -3 / +2
Query: 901 ARLSIRLSAVGLQRSS*LDV*FSSP*Q*RSTSPGGSFILLMDSSLQSMLNWESTYSVLAL 722
ARLSIR S VGLQRSS*LDV*FSSP*Q* STSPGGS ILLMDSSLQSMLNWESTYSVLA
Sbjct: 263 ARLSIRSSVVGLQRSS*LDV*FSSP*Q*HSTSPGGSSILLMDSSLQSMLNWESTYSVLAS 442
Query: 721 SHLLLSYF*SE 689
SHLLLSYF* E
Sbjct: 443 SHLLLSYF*LE 475
Score = 69.3 bits (145), Expect(2) = 2e-045
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -3 / +2
Query: 616 FVISTMHRSKLVLQYHQIRTNRRSRKWSS 530
FVISTMHRSKLVLQYHQIRTNR SRKWSS
Sbjct: 548 FVISTMHRSKLVLQYHQIRTNRHSRKWSS 634
Score = 67.5 bits (141), Expect(2) = 2e-057
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2 / -3
Query: 827 WGRELHIQS*TSLKPNCGQPYGKPRGRRGR 916
WGRELHIQS*TSLKPN G+PYGKPRG+R R
Sbjct: 337 WGRELHIQS*TSLKPNYGRPYGKPRGQRRR 248
Score = 34.5 bits (69), Expect(2) = 1e-058
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +3
Query: 873 LGFKEVHDWMC 841
LGFKEVHDWMC
Sbjct: 291 LGFKEVHDWMC 323
>gb|AW563838.1|AW563838 LG1_272_B09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 517
Score = 290 bits (628), Expect = 2e-077
Identities = 116/144 (80%), Positives = 133/144 (92%)
Frame = -2 / +3
Query: 899 EAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFV 720
EAF +V+RSWA KKFM+GCVIL PIAITFY TWWFI FVDGFFSPIY LGI++FGLGFV
Sbjct: 63 EAFSRVIRSWAWKKFMSGCVILLPIAITFYTTWWFIRFVDGFFSPIYVHLGIHLFGLGFV 242
Query: 719 TSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKE 540
TS++FIFL+GVFMSSWLGAS+L LGE+ IKRMPLVRHIY+ASKQISAAISPDQ+ +AFKE
Sbjct: 243 TSISFIFLVGVFMSSWLGASLLGLGEFCIKRMPLVRHIYSASKQISAAISPDQSSRAFKE 422
Query: 539 VVIIRHPRVGEYAFGFITSSVSLQ 468
VVIIRHPR+GEYA GFITS+V+L+
Sbjct: 423 VVIIRHPRIGEYALGFITSTVALR 494
Score = 185 bits (398), Expect = 1e-045
Identities = 84/141 (59%), Positives = 102/141 (72%)
Frame = +1 / -1
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAALICFDAL*I*RTRGMRLIIHSPRLR 657
T DVMKP+AYSP GC M+TTSL A SGDIAALIC +A *+ RT G+ L+ +SPR R
Sbjct: 484 TVDVMKPSAYSPILGCRMITTSLKALELWSGDIAALICLEAE*MWRTSGILLMQNSPRPR 305
Query: 658 TDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A*IGEKNPSTK*MNHQVM*NVIAMGKR 837
+APS DD+ TP + MK+ +VT PRP IP *+GEK PSTK MNH V+* V+A+G R
Sbjct: 304 REAPSHDDMNTPTRKMKLMEVTNPRPKRCIPRWT*MGEKKPSTKRMNHHVV*KVMAIGSR 125
Query: 838 ITHPVMNFFEAQLRTTLWKAS 900
+THP +NFF AQLR TL AS
Sbjct: 124 MTHPDINFFHAQLRITLENAS 62
Score = 103 bits (219), Expect = 5e-021
Identities = 46/128 (35%), Positives = 80/128 (62%)
Frame = +3 / -3
Query: 489 DETKRIFSNTRMPYDDHFLERLFVLIW*YCSTNLLRCIVDMTNKRHALNNPLAKAKDRCP 668
DE +R+ ++ R+P D H LE L+W YC +LL VD+ ++RH L+ LA+A++
Sbjct: 473 DEAQRVLADPRVPDDHHLLEGS*ALVWRYCGADLLGSRVDVAHQRHPLDAELAEAEEGGA 294
Query: 669 KPR*HKDSDQKYESNRCDKAKTEYVDSQLSIDWREESINKMNEPPGDVERYCYGEENYTS 848
+PR H+ + ++ E++ DK + E + ++ +D REE++++ +EPP VE E++ TS
Sbjct: 293 QPRRHEHAHEEDEADGGDKPEAEEMYPEMDVDGREEAVDEADEPPCRVEGDGDREQDDTS 114
Query: 849 SHELL*SP 872
H+LL P
Sbjct: 113 RHKLLPCP 90
>gb|CD228570.1|CD228570 CCC1_8_A06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_A06_A007 5', mRNA sequence
Length = 640
Score = 273 bits (591), Expect = 2e-072
Identities = 101/146 (69%), Positives = 130/146 (89%)
Frame = -2 / +1
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
R+A V++SW S+KFMTGCV+LFP+A+TF+ITWWFI FVDGFFSP+YA+ G++IFGLGF
Sbjct: 199 RKACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKFGVDIFGLGF 378
Query: 722 VTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 543
+TS+ FIFL+G+F+SSW+G+++ +GEW IK+MP VRH+Y+ASKQ+S AISPDQN AFK
Sbjct: 379 LTSLVFIFLVGLFVSSWVGSTIFWVGEWFIKKMPFVRHLYSASKQVSTAISPDQNTTAFK 558
Query: 542 EVVIIRHPRVGEYAFGFITSSVSLQS 465
EV IIRHPR+GEYAFGFITS+V LQ+
Sbjct: 559 EVAIIRHPRIGEYAFGFITSTVVLQT 636
Score = 115 bits (245), Expect = 1e-024
Identities = 61/147 (41%), Positives = 86/147 (58%)
Frame = +3 / -2
Query: 462 ITLEGY*RCDETKRIFSNTRMPYDDHFLERLFVLIW*YCSTNLLRCIVDMTNKRHALNNP 641
++L+ + C E+K IF+N+ M +F E +LIW* CS +LL + M K H L P
Sbjct: 639 VSLKDHR*CYESKCIFTNSWMTNYCNFFESCCILIW*NCSADLL*R*I*MPYKWHFLYKP 460
Query: 642 LAKAKDRCPKPR*HKDSDQKYESNRCDKAKTEYVDSQLSIDWREESINKMNEPPGDVERY 821
L+ +D P +K S+QKYE R K KT+YV+S+ I E++INK+N+PP D E
Sbjct: 459 LSYPEDG*TNP*RNK*SNQKYEYQRSQKTKTKYVNSKFCI*GTEKTINKLNKPPCDEECD 280
Query: 822 CYGEENYTSSHELL*SPTADNLMESLA 902
C E++Y SSH+ * PT N LA
Sbjct: 279 CNREKDYASSHKFS*DPTLKNSTACLA 199
Score = 102 bits (217), Expect(2) = 4e-034
Identities = 47/96 (48%), Positives = 58/96 (60%)
Frame = +1 / -3
Query: 616 TRGMRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A*IGEKNPSTK*M 795
T G+ I HSP + P+ ++ +P +NM +V KPRPNM P+ A G K PST *+
Sbjct: 485 TNGIFFINHSPTQKMVEPTHEETNSPTRNMNTREVKKPRPNMSTPNFAYKGLKKPSTN*I 306
Query: 796 NHQVM*NVIAMGKRITHPVMNFFEAQLRTTLWKASR 903
NH VM NV A GKR THPV+NF E QL T A R
Sbjct: 305 NHHVMKNVTATGKRTTHPVINFLETQL*RTAQHALR 198
Score = 64.3 bits (134), Expect(2) = 4e-034
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1 / -3
Query: 472 RDTDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAALICFDA 600
R T DVM PNAYSP RG ++ TSL A +F*SG+IA L CFDA
Sbjct: 629 RTTVDVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDA 501
>gb|BM324254.1|BM324254 PIC1_26_B07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 558
Score = 264 bits (571), Expect = 1e-069
Identities = 96/139 (69%), Positives = 124/139 (89%)
Frame = -2 / +1
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
R+A V++SW S+KFMTGCV+LFP+A+TF+ITWWFI FVDGFFSP+YA+ G++IFGLGF
Sbjct: 142 RKACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKFGVDIFGLGF 321
Query: 722 VTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 543
+TS+ FIFL+G+F+SSW+G+++ +GEW IK+MP VRH+Y+ASKQ+S AISPDQN AF+
Sbjct: 322 LTSLVFIFLVGLFVSSWVGSTIFWVGEWFIKKMPFVRHLYSASKQVSTAISPDQNTTAFR 501
Query: 542 EVVIIRHPRVGEYAFGFIT 486
EV IIRHPR+GEYAFGFIT
Sbjct: 502 EVAIIRHPRIGEYAFGFIT 558
Score = 115 bits (246), Expect = 9e-025
Identities = 61/139 (43%), Positives = 81/139 (58%)
Frame = +3 / -1
Query: 486 CDETKRIFSNTRMPYDDHFLERLFVLIW*YCSTNLLRCIVDMTNKRHALNNPLAKAKDRC 665
C E+K IF+N+ M +F E +LIW* CS +LL + M K H L PL+ +D
Sbjct: 558 CYESKCIFTNSWMTNYCNFSESCCILIW*NCSADLL*R*I*MPYKWHFLYKPLSYPEDG* 379
Query: 666 PKPR*HKDSDQKYESNRCDKAKTEYVDSQLSIDWREESINKMNEPPGDVERYCYGEENYT 845
P +K S+QKYE R K KT+YVDS+ I E++INK+N+PP D E C E++Y
Sbjct: 378 TNP*RNK*SNQKYEYQRSQKTKTKYVDSKFCI*GTEKTINKLNKPPCDEECDCNREKDYA 199
Query: 846 SSHELL*SPTADNLMESLA 902
SSH+ * PT N LA
Sbjct: 198 SSHKFS*DPTLKNSTACLA 142
Score = 102 bits (217), Expect(2) = 2e-032
Identities = 47/96 (48%), Positives = 58/96 (60%)
Frame = +1 / -2
Query: 616 TRGMRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A*IGEKNPSTK*M 795
T G+ I HSP + P+ ++ +P +NM +V KPRPNM P+ A G K PST *+
Sbjct: 428 TNGIFFINHSPTQKMVEPTHEETNSPTRNMNTREVKKPRPNMSTPNFAYKGLKKPSTN*I 249
Query: 796 NHQVM*NVIAMGKRITHPVMNFFEAQLRTTLWKASR 903
NH VM NV A GKR THPV+NF E QL T A R
Sbjct: 248 NHHVMKNVTATGKRTTHPVINFLETQL*RTAQHALR 141
Score = 58.8 bits (122), Expect(2) = 2e-032
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1 / -2
Query: 487 VMKPNAYSPTRGCLMMTTSLNACLF*SGDIAALICFDA 600
VM PNAYSP RG ++ TSL A +F*SG+IA L CFDA
Sbjct: 557 VMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDA 444
>gb|CD227944.1|CD227944 CCC1_56_E05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_E05_A007 5', mRNA sequence
Length = 646
Score = 244 bits (527), Expect = 2e-063
Identities = 95/112 (84%), Positives = 103/112 (91%)
Frame = -2 / +3
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
REAFHKVV SWASKKFMTGCVILFPIA+TFY+TWWF FVDGFFSPIYA LGI IFGLGF
Sbjct: 309 REAFHKVVHSWASKKFMTGCVILFPIAVTFYVTWWFFRFVDGFFSPIYAHLGIKIFGLGF 488
Query: 722 VTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISP 567
VTS++FIF++GVFMSSWLGAS+L LGEW IKRMP VRHIY+AS QISAAISP
Sbjct: 489 VTSISFIFVVGVFMSSWLGASILGLGEWFIKRMPFVRHIYDASXQISAAISP 644
Score = 176 bits (378), Expect = 6e-043
Identities = 78/113 (69%), Positives = 87/113 (76%)
Frame = +1 / -1
Query: 565 SGDIAALICFDAL*I*RTRGMRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRPNML 744
SG++AALIC DA *I RT G+R + HSPR R DAPSQDD+ TP MK DVTKP PN+L
Sbjct: 646 SGEMAALICXDAS*IWRTNGIRFMNHSPRPRIDAPSQDDMNTPTTKMKDIDVTKPSPNIL 467
Query: 745 IPS*A*IGEKNPSTK*MNHQVM*NVIAMGKRITHPVMNFFEAQLRTTLWKASR 903
IP *A IGEK PSTK NH V *NV A+GKR+THPVMNF +AQL TTLW ASR
Sbjct: 466 IPK*AYIGEKKPSTKRKNHHVT*NVTAIGKRMTHPVMNFLDAQLCTTLWNASR 308
Score = 135 bits (289), Expect = 1e-030
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = +3 / -3
Query: 579 STNLLRCIVDMTNKRHALNNPLAKAKDRCPKPR*HKDSDQKYESNRCDKAKTEYVDSQLS 758
ST+LLRCI++M NK H+ PL++ KDRCP+PR*H+ ++ + E RC K K +Y DSQ+S
Sbjct: 632 STDLLRCIINMANKWHSFYEPLSETKDRCPQPR*HEYTNHENERYRCYKTKPKYFDSQVS 453
Query: 759 IDWREESINKMNEPPGDVERYCYGEENYTSSHELL*SPTADNLMESLA 902
I W E++I+K EPP +E C EE+ TS HELL P NLME LA
Sbjct: 452 IYWGEKAIHKTKEPPCHIECNCNWEEDDTSGHELLGRPAMHNLMERLA 309
>gb|CD227672.1|CD227672 CCC1_53_D08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_D08_A007 3', mRNA sequence
Length = 655
Score = 239 bits (516), Expect = 5e-062
Identities = 101/134 (75%), Positives = 114/134 (85%)
Frame = -2 / +3
Query: 644 EWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQS 465
EW IKRMP VRHIY+ASKQISAAISPDQNK AFKEVVIIRHPR+GEYAFGFITS V LQ
Sbjct: 3 EWFIKRMPFVRHIYDASKQISAAISPDQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQG 182
Query: 464 YSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDP 285
YS +E +YCVYVPTNHLYIGDIF+V+S DVIRPN+SVREGIEIVVS G +MPQ+LS L+
Sbjct: 183 YSSEEKMYCVYVPTNHLYIGDIFLVSSSDVIRPNMSVREGIEIVVSVGTTMPQVLSILET 362
Query: 284 QMILGDRTGPSRS* 243
+ +R +RS*
Sbjct: 363 EPNQLNRIRSTRS* 404
Score = 122 bits (262), Expect = 6e-027
Identities = 55/113 (48%), Positives = 76/113 (67%)
Frame = +3 / -3
Query: 306 LGHRHTTRYNNFDAFTHRKIWPYDIL*IHHEDITNVKMVRWDIDAVKIFLTRITLEGY*R 485
L HR R NNF+AF +R + P + * + + N+KMV W+I+ V +F TRITL+ R
Sbjct: 341 LRHRRAHRDNNFNAFANRHVRPNHVT*ADQKYVPNIKMVGWNINTVHLFFTRITLK*NFR 162
Query: 486 CDETKRIFSNTRMPYDDHFLERLFVLIW*YCSTNLLRCIVDMTNKRHALNNPL 644
D++K IF+N+ +P DDHFLE + VLI * ST+LLRCI++M NK H+ PL
Sbjct: 161 SDKSKCIFANSWVPNDDHFLECMLVLIR*NGSTDLLRCIINMANKWHSFYEPL 3
Score = 122 bits (262), Expect = 6e-027
Identities = 52/117 (44%), Positives = 73/117 (62%)
Frame = -1 / +2
Query: 645 RVDY*AHASCSSYLQCIEAN*CCNITRSEQTGVQGSGHHKASSCWRICVWFHHIVSIPPE 466
RV + +A CS YL CI AN CC+ T S+Q +QGSGHH A WRIC+W +H S
Sbjct: 2 RVVHKTNAICSPYL*CI*ANQCCHFT*SKQACIQGSGHH*APKNWRICIWIYHFGSSTSG 181
Query: 465 LFWSRRSLLRLCPNEPSLHW*YLHGEFKGCHKAKSFCA*RHRNCCIWWYVDAPNSVN 295
LF R+ +L LC N+PSL+W ++ G+ K A+ C+ RH NCC+ + DA + ++
Sbjct: 182 LF**RKDVLCLCSNQPSLYWGHISGQLK*RD*AEHVCSRRH*NCCLCGHDDASSIID 352
Score = 94.5 bits (200), Expect(2) = 3e-036
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +1 / -1
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAALICFDAL*I*RTRGMRLIIHS 645
T +V+ PNAYSP GCLMMTTSLNACLF*SG++AALIC DA *I RT G+R + HS
Sbjct: 169 TSEVINPNAYSPILGCLMMTTSLNACLF*SGEMAALICLDAS*IWRTNGIRFMNHS 2
Score = 79.4 bits (167), Expect(2) = 3e-036
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +1 / -1
Query: 289 SRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ 441
SR+D GI +P +TTISMPSRT+ FGL+TS E T +SP+*RW VGT*TQ
Sbjct: 358 SRIDNT*GIVVPTETTISMPSRTDMFGLITSLELTRNMSPI*RWLVGT*TQ 206
>gb|CN139974.1|CN139974 OX1_33_F07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_F07_A002 3', mRNA sequence
Length = 608
Score = 225 bits (486), Expect = 7e-058
Identities = 87/122 (71%), Positives = 108/122 (88%)
Frame = -2 / +2
Query: 650 LGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSL 471
+GEW IK+MP VRH+Y+ASKQ+S AISPDQN AFKEV IIRHPR+GEYA GFITS+V L
Sbjct: 2 VGEWFIKKMPFVRHLYSASKQVSTAISPDQNTTAFKEVAIIRHPRIGEYALGFITSTVVL 181
Query: 470 QSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTL 291
Q+ G E+L VYVPTNHLYIGDIF+VN +++IRPNLS+REGIEI+VSGGM+MPQ++++L
Sbjct: 182 QTDKGDEELCSVYVPTNHLYIGDIFLVNCEEIIRPNLSIREGIEIIVSGGMTMPQVIASL 361
Query: 290 DP 285
+P
Sbjct: 362 EP 367
Score = 114 bits (244), Expect = 2e-024
Identities = 55/97 (56%), Positives = 68/97 (70%)
Frame = +1 / -3
Query: 310 GIDIPPDTTISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ*RSS*PE*LWRDTDDV 489
G+ IPP+T IS+PSR ++ GL+ S +FT +SPM R FVGT T SS P + R T DV
Sbjct: 342 GMVIPPETIISIPSRMDKLGLIISSQFTRNMSPMYR*FVGTYTLHSSSSPLSV*RTTVDV 163
Query: 490 MKPNAYSPTRGCLMMTTSLNACLF*SGDIAALICFDA 600
M PNAYSP RG ++ TSL A +F*SG+IA L CFDA
Sbjct: 162 MNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDA 52
>gb|CW059703.1|CW059703 104_302_10519473_114_30162 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519473, DNA
sequence
Length = 688
Score = 116 bits (248), Expect(3) = 5e-053
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = -2 / -2
Query: 734 GLGFVTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISP 567
GLGFVTS++FIFL+GVFMSSWLGAS+L LGE+ IKRMPLVRHIY+ASKQISAAISP
Sbjct: 588 GLGFVTSISFIFLVGVFMSSWLGASLLGLGEFCIKRMPLVRHIYSASKQISAAISP 421
Score = 75.8 bits (159), Expect(3) = 8e-028
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = +1 / +2
Query: 568 GDIAALICFDAL*I*RTRGMRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRP 735
GDIAALIC +A *+ RT G+ L+ +SPR R +APS DD+ TP + MK+ +VT PRP
Sbjct: 422 GDIAALICLEAE*MWRTSGILLMQNSPRPRREAPSHDDMNTPTRKMKLMEVTNPRP 589
Score = 67.0 bits (140), Expect(3) = 5e-053
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -2 / -2
Query: 455 QEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 342
Q+DL CVYVPTN+LY+GDIF+++ DVI P+LSVRE I
Sbjct: 192 QQDLACVYVPTNNLYLGDIFLMSRADVIIPDLSVREAI 79
Score = 64.8 bits (135), Expect(3) = 5e-053
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -2 / -2
Query: 566 DQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQ 468
DQ+ +AFKEVVIIRHPR+GEYA GFITS+V+L+
Sbjct: 312 DQSSRAFKEVVIIRHPRIGEYALGFITSTVALR 214
Score = 46.9 bits (96), Expect(3) = 8e-028
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 337 ISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ*RS 450
+ M SRTER G+MTS K+SP *R VGT*TQ RS
Sbjct: 74 LPMASRTERSGIMTSARLMRKMSPR*RLLVGT*TQARS 187
Score = 44.1 bits (90), Expect(3) = 8e-028
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNA 552
T DVMKP+AYSP GC M+TTSL A
Sbjct: 224 TVDVMKPSAYSPILGCRMITTSLKA 298
>gb|CL195616.1|CL195616 104_421_10942498_116_32315_045 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942498, DNA
sequence
Length = 652
Score = 116 bits (248), Expect(3) = 5e-053
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = -2 / +1
Query: 734 GLGFVTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISP 567
GLGFVTS++FIFL+GVFMSSWLGAS+L LGE+ IKRMPLVRHIY+ASKQISAAISP
Sbjct: 10 GLGFVTSISFIFLVGVFMSSWLGASLLGLGEFCIKRMPLVRHIYSASKQISAAISP 177
Score = 75.8 bits (159), Expect(3) = 7e-028
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 568 GDIAALICFDAL*I*RTRGMRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRP 735
GDIAALIC +A *+ RT G+ L+ +SPR R +APS DD+ TP + MK+ +VT PRP
Sbjct: 176 GDIAALICLEAE*MWRTSGILLMQNSPRPRREAPSHDDMNTPTRKMKLMEVTNPRP 9
Score = 67.0 bits (140), Expect(3) = 5e-053
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -2 / +1
Query: 455 QEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 342
Q+DL CVYVPTN+LY+GDIF+++ DVI P+LSVRE I
Sbjct: 406 QQDLACVYVPTNNLYLGDIFLMSRADVIIPDLSVREAI 519
Score = 64.8 bits (135), Expect(3) = 5e-053
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -2 / +1
Query: 566 DQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQ 468
DQ+ +AFKEVVIIRHPR+GEYA GFITS+V+L+
Sbjct: 286 DQSSRAFKEVVIIRHPRIGEYALGFITSTVALR 384
Score = 46.9 bits (96), Expect(3) = 7e-028
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +1 / -3
Query: 337 ISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ*RS 450
+ M SRTER G+MTS K+SP *R VGT*TQ RS
Sbjct: 524 LPMASRTERSGIMTSARLMRKMSPR*RLLVGT*TQARS 411
Score = 44.1 bits (90), Expect(3) = 7e-028
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / -3
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNA 552
T DVMKP+AYSP GC M+TTSL A
Sbjct: 374 TVDVMKPSAYSPILGCRMITTSLKA 300
>gb|CX612665.1|CX612665 GABR1_3_F09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_F09_A002 5', mRNA sequence
Length = 570
Score = 200 bits (431), Expect = 3e-050
Identities = 77/92 (83%), Positives = 84/92 (91%)
Frame = -2 / +2
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
REAFHKVV SWASKKFMTGCVILF IA+TFY+TWWF FVDGFFSPIYA LGI IFGLGF
Sbjct: 293 REAFHKVVHSWASKKFMTGCVILFRIAVTFYVTWWFFRFVDGFFSPIYAHLGIIIFGLGF 472
Query: 722 VTSVTFIFLIGVFMSSWLGASVLSLGEWIIKR 627
VTS++FIF++GVFMSSWLGAS+L LGEW IKR
Sbjct: 473 VTSISFIFVVGVFMSSWLGASILGLGEWFIKR 568
Score = 143 bits (306), Expect = 5e-033
Identities = 62/93 (66%), Positives = 70/93 (75%)
Frame = +1 / -1
Query: 625 MRLIIHSPRLRTDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A*IGEKNPSTK*MNHQ 804
+R + HSPR R DAPSQDD+ TP MK DVTKP PN++IP *A IGEK PSTK NH
Sbjct: 570 IRFMNHSPRPRIDAPSQDDMNTPTTKMKDIDVTKPSPNIMIPK*AYIGEKKPSTKRKNHH 391
Query: 805 VM*NVIAMGKRITHPVMNFFEAQLRTTLWKASR 903
V *NV A+ KR+THPVMNF +AQL TTLW ASR
Sbjct: 390 VT*NVTAIRKRMTHPVMNFLDAQLCTTLWNASR 292
>gb|CN145086.1|CN145086 WOUND1_26_E07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_E07_A002 5', mRNA sequence
Length = 501
Score = 197 bits (424), Expect = 3e-049
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = -2 / +3
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPI AQLGINIFGLGF
Sbjct: 255 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPI*AQLGINIFGLGF 434
Query: 722 VTSVTFIFLIGVFMSSWLGASV 657
+TSVTFIFLIGVFMSSW+GASV
Sbjct: 435 ITSVTFIFLIGVFMSSWVGASV 500
Score = 184 bits (397), Expect = 1e-045
Identities = 79/82 (96%), Positives = 80/82 (97%)
Frame = +1 / -3
Query: 658 TDAPSQDDIKTPIKNMKVTDVTKPRPNMLIPS*A*IGEKNPSTK*MNHQVM*NVIAMGKR 837
TDAP+QDDIKTPIKNMKVTDV KPRPNMLIPS*A*IGEKNPSTK MNHQVM*NVIAMGKR
Sbjct: 499 TDAPTQDDIKTPIKNMKVTDVMKPRPNMLIPS*A*IGEKNPSTKWMNHQVM*NVIAMGKR 320
Query: 838 ITHPVMNFFEAQLRTTLWKASR 903
ITHPVMNFFEAQLRTTLWKASR
Sbjct: 319 ITHPVMNFFEAQLRTTLWKASR 254
Score = 183 bits (394), Expect = 4e-045
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = +3 / -2
Query: 657 DRCPKPR*HKDSDQKYESNRCDKAKTEYVDSQLSIDWREESINKMNEPPGDVERYCYGEE 836
DRC PR*HKDS+QKYESNRCD+AKTEYVDSQLS+DWREESINKM+EPPGDVE YCYGEE
Sbjct: 500 DRCSNPR*HKDSNQKYESNRCDEAKTEYVDSQLSLDWREESINKMDEPPGDVECYCYGEE 321
Query: 837 NYTSSHELL*SPTADNLMESLA 902
NYTSSHELL*SPT D+LMESLA
Sbjct: 320 NYTSSHELL*SPTTDDLMESLA 255
Score = 132 bits (282), Expect = 1e-029
Identities = 64/71 (90%), Positives = 64/71 (90%)
Frame = -3 / +1
Query: 901 ARLSIRLSAVGLQRSS*LDV*FSSP*Q*RSTSPGGSFILLMDSSLQSMLNWESTYSVLAL 722
ARLSIR S VGLQRSS*LDV*FSSP*Q* STSPGGS ILLMDSSLQS LNWESTYSVLA
Sbjct: 256 ARLSIRSSVVGLQRSS*LDV*FSSP*Q*HSTSPGGSSILLMDSSLQSRLNWESTYSVLAS 435
Query: 721 SHLLLSYF*SE 689
SHLLLSYF* E
Sbjct: 436 SHLLLSYF*LE 468
Score = 101 bits (215), Expect(2) = 5e-025
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = -1 / +2
Query: 789 FC*WILLSNLCSTGNQHIRSWLCHICYFHIFDRSLYVILAWGIC 658
FC*WILLSNL STGNQHIRSWL HICYFHIFD SLYVIL W IC
Sbjct: 368 FC*WILLSNLGSTGNQHIRSWLHHICYFHIFDWSLYVILGWSIC 499
Score = 83.5 bits (176), Expect(2) = 2e-029
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +2 / -1
Query: 656 GQMPQAKMT*RLRSKI*K*QM*QSQDRIC*FPVEHRLERRIHQQN 790
GQM Q KMT*RL+SKI*K*QM* SQDRIC*FPVE RLERRIHQQN
Sbjct: 501 GQMLQPKMT*RLQSKI*K*QM**SQDRIC*FPVEPRLERRIHQQN 367
Score = 67.5 bits (141), Expect(2) = 2e-029
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2 / -1
Query: 827 WGRELHIQS*TSLKPNCGQPYGKPRGRRGR 916
WGRELHIQS*TSLKPN G+PYGKPRG+R R
Sbjct: 330 WGRELHIQS*TSLKPNYGRPYGKPRGQRRR 241
Score = 34.5 bits (69), Expect(2) = 5e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 873 LGFKEVHDWMC 841
LGFKEVHDWMC
Sbjct: 284 LGFKEVHDWMC 316
>gb|BG159361.1|BG159361 OV2_6_G12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 486
Score = 183 bits (395), Expect = 3e-045
Identities = 72/97 (74%), Positives = 88/97 (90%)
Frame = -2 / +3
Query: 575 ISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIF 396
ISPDQN AFKEV IIRHPR+GEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF
Sbjct: 3 ISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIF 182
Query: 395 MVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDP 285
+VNS+++IRPNLS+REGIEI+VSGGM+MPQ++++L+P
Sbjct: 183 LVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEP 293
>gb|CW059704.1|CW059704 104_302_10519473_115_30168 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519473, DNA
sequence
Length = 603
Score = 116 bits (248), Expect(2) = 5e-043
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = -2 / +1
Query: 734 GLGFVTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISP 567
GLGFVTS++FIFL+GVFMSSWLGAS+L LGE+ IKRMPLVRHIY+ASKQISAAISP
Sbjct: 361 GLGFVTSISFIFLVGVFMSSWLGASLLGLGEFCIKRMPLVRHIYSASKQISAAISP 528
Score = 82.2 bits (173), Expect(2) = 5e-043
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -2 / +1
Query: 842 VILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFVTSV 711
VIL PIAITFY TWWFI FVDGFFSPIY LGI++FG + V
Sbjct: 97 VILLPIAITFYTTWWFIRFVDGFFSPIYVHLGIHLFGNNIINRV 228
>gb|CX608003.1|CX608003 ANR1_32_C02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_C02_A002 3', mRNA sequence
Length = 760
Score = 156 bits (336), Expect(2) = 3e-040
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -2 / +2
Query: 566 DQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVN 387
DQNK AFKEVVIIRHPR+GEYAFGFITS V LQ YS +E +YCVYVPTNHLYIGDIF+V+
Sbjct: 101 DQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQGYSSEEKMYCVYVPTNHLYIGDIFLVS 280
Query: 386 SKDVIRPNLSVREGI 342
S DVIRPN+SVREGI
Sbjct: 281 SSDVIRPNMSVREGI 325
Score = 60.2 bits (125), Expect(3) = 4e-022
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1 / -2
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNACLF*S 567
T +V+ PNAYSP GCLMMTTSLNACLF*S
Sbjct: 189 TSEVINPNAYSPILGCLMMTTSLNACLF*S 100
Score = 58.3 bits (121), Expect(3) = 4e-022
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1 / -2
Query: 337 ISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ 441
I MPSRT+ FGL+TS E T +SP+*RW VGT*TQ
Sbjct: 330 IPMPSRTDMFGLITSLELTRNMSPI*RWLVGT*TQ 226
Score = 30.4 bits (60), Expect(2) = 3e-040
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2 / +1
Query: 341 EIVVSGGMSMPQILSTLDPQMILGDRTGPSRS* 243
EIVVS G +MPQ+LS L+ + +R +RS*
Sbjct: 427 EIVVSVGTTMPQVLSILETEPNQLNRIRSTRS* 525
Score = 25.4 bits (49), Expect(3) = 4e-022
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1 / -3
Query: 289 SRVDRIWGIDIPPDTTIS 342
SR+D GI +P +TTIS
Sbjct: 479 SRIDNT*GIVVPTETTIS 426
>gb|AW283437.3|AW283437 LG1_272_B09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 99.6 bits (211), Expect(2) = 5e-039
Identities = 40/63 (63%), Positives = 54/63 (85%)
Frame = -2 / +2
Query: 455 QEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQMI 276
Q+DL CVYVPTN+LY+GDIF+++ DVI P+LSVRE IEIV+SGGMS+P+I+S ++ +
Sbjct: 149 QQDLACVYVPTNNLYLGDIFLMSRADVIIPDLSVREAIEIVLSGGMSVPKIISAVEGAVG 328
Query: 275 LGD 267
LGD
Sbjct: 329 LGD 337
Score = 83.5 bits (176), Expect(2) = 5e-039
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = -2 / +2
Query: 593 KQISAAISPDQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQ 468
KQISAAISPDQ+ +AFKEVVIIRHPR+GEYA GFITS+V+L+
Sbjct: 2 KQISAAISPDQSSRAFKEVVIIRHPRIGEYALGFITSTVALR 127
Score = 75.3 bits (158), Expect(2) = 4e-025
Identities = 36/61 (59%), Positives = 41/61 (67%)
Frame = +1 / -3
Query: 268 SPRIICGSRVDRIWGIDIPPDTTISMPSRTERFGLMTSFEFTMKISPM*RWFVGT*TQ*R 447
SPR S D I+G D+PP+ TISM SRTER G+MTS K+SP *R VGT*TQ R
Sbjct: 336 SPRPTAPSTADMIFGTDMPPERTISMASRTERSGIMTSARLMRKMSPR*RLLVGT*TQAR 157
Query: 448 S 450
S
Sbjct: 156 S 154
Score = 61.1 bits (127), Expect(2) = 4e-025
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1 / -3
Query: 478 TDDVMKPNAYSPTRGCLMMTTSLNACLF*SGDIAALIC 591
T DVMKP+AYSP GC M+TTSL A SGDIAALIC
Sbjct: 117 TVDVMKPSAYSPILGCRMITTSLKALELWSGDIAALIC 4
>gb|AW564073.1|AW564073 LG1_282_A07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 490
Score = 159 bits (342), Expect = 5e-038
Identities = 58/90 (64%), Positives = 77/90 (85%)
Frame = -2 / +3
Query: 914 GRVDREAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIF 735
G R+A V++SW S+KFMTGCV+LFPIA+TF+ITWWFI FVDGFFSP+YA+LG +IF
Sbjct: 219 GTSTRKACFAVLQSWVSRKFMTGCVVLFPIAVTFFITWWFIQFVDGFFSPLYAKLGFDIF 398
Query: 734 GLGFVTSVTFIFLIGVFMSSWLGASVLSLG 645
GLGF+TS+ FI L+G+F+SSW+G++V +G
Sbjct: 399 GLGFLTSLLFILLVGIFVSSWVGSTVFWVG 488
>gb|CW070747.1|CW070747 104_322_10590981_116_30543 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10590981, DNA
sequence
Length = 656
Score = 85.8 bits (181), Expect(2) = 2e-029
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = -2 / +3
Query: 473 LQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVV 330
LQ+ G E+L VYVPTNHLYIGDIF+VNS+++IRPNLS+REGI +VV
Sbjct: 393 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIGMVV 536
Score = 67.0 bits (140), Expect(2) = 2e-029
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -2 / +3
Query: 566 DQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQ 468
DQN AFKEV IIRHPR+GEYAFGFITS+V LQ
Sbjct: 57 DQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQ 155
>gb|BM328755.1|BM328755 PIC1_26_B07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 574
Score = 129 bits (277), Expect = 5e-029
Identities = 50/71 (70%), Positives = 65/71 (91%)
Frame = -2 / +2
Query: 497 GFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGM 318
GFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS+++IRPNLS+REGIEI+VSGGM
Sbjct: 2 GFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGM 181
Query: 317 SMPQILSTLDP 285
+MPQ++++L+P
Sbjct: 182 TMPQVIASLEP 214
>gb|CX608084.1|CX608084 ANR1_32_C02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_C02_A002 5', mRNA sequence
Length = 610
Score = 128 bits (274), Expect = 1e-028
Identities = 51/78 (65%), Positives = 60/78 (76%)
Frame = -2 / +3
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 723
REAFH VV SWAS KFMTGCVILFPIA+TFY+TWWF FVDGFFSPIYA+LGI IFG+
Sbjct: 294 REAFHMVVHSWAS*KFMTGCVILFPIAVTFYVTWWFFRFVDGFFSPIYARLGIKIFGMYE 473
Query: 722 VTSVTFIFLIGVFMSSWL 669
+ S +L+ ++ L
Sbjct: 474 MHSDCCCYLLSRILAGTL 527
>gb|CW098783.1|CW098783 104_465_11003193_148_34368_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003193, DNA
sequence
Length = 662
Score = 67.0 bits (140), Expect(3) = 6e-028
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -2 / +3
Query: 455 QEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 342
Q+DL CVYVPTN+LY+GDIF+++ DVI P+LSVRE I
Sbjct: 186 QQDLACVYVPTNNLYLGDIFLMSRADVIIPDLSVREAI 299
Score = 64.8 bits (135), Expect(3) = 6e-028
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -2 / +3
Query: 566 DQNKQAFKEVVIIRHPRVGEYAFGFITSSVSLQ 468
DQ+ +AFKEVVIIRHPR+GEYA GFITS+V+L+
Sbjct: 66 DQSSRAFKEVVIIRHPRIGEYALGFITSTVALR 164
Score = 35.4 bits (71), Expect(3) = 6e-028
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -2 / +3
Query: 341 EIVVSGGMSMPQILSTLDPQMILGD 267
EIV+SGGMS+P+I+S ++ + LGD
Sbjct: 453 EIVLSGGMSVPKIISAVEGAVGLGD 527
>gb|BG465944.1|BG465944 RHIZ2_46_E09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 602
Score = 116 bits (249), Expect = 4e-025
Identities = 44/63 (69%), Positives = 58/63 (92%)
Frame = -2 / +2
Query: 473 LQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILST 294
LQ+ G E+L VYVPTNHLYIGDIF+VNS+++IRPNLS+REGIEI+VSGGM+MPQ++++
Sbjct: 5 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIAS 184
Query: 293 LDP 285
L+P
Sbjct: 185 LEP 193
>gb|BG101804.1|BG101804 RHIZ2_22_F05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 290
Score = 116 bits (247), Expect = 7e-025
Identities = 44/63 (69%), Positives = 57/63 (90%)
Frame = -2 / +3
Query: 473 LQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILST 294
LQ+ G E+L VYVPTNHLYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQ++++
Sbjct: 6 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVITS 185
Query: 293 LDP 285
L+P
Sbjct: 186 LEP 194
>gb|BG102344.1|BG102344 RHIZ2_22_F05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 456
Score = 115 bits (245), Expect = 1e-024
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = -2 / +3
Query: 914 GRVDREAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIF 735
G R+A V++SW S+KFMTGCV+LFPIA+TF+ITWWFI FVDG FSP+YA+LG +IF
Sbjct: 270 GTSTRKACFAVLQSWVSRKFMTGCVVLFPIAVTFFITWWFIQFVDGLFSPLYAKLGFDIF 449
Query: 734 GL 729
GL
Sbjct: 450 GL 455
>gb|CD228545.1|CD228545 CCC1_8_A06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_A06_A007 3', mRNA sequence
Length = 652
Score = 114 bits (244), Expect = 2e-024
Identities = 43/63 (68%), Positives = 58/63 (92%)
Frame = -2 / +3
Query: 473 LQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILST 294
LQ+ G E+L VYVPTNHLYIGDIF+V+S+++IRPNLS+REGIEI+VSGGM+MPQ++++
Sbjct: 3 LQTDKGDEELCSVYVPTNHLYIGDIFLVDSEEIIRPNLSIREGIEIIVSGGMTMPQVIAS 182
Query: 293 LDP 285
L+P
Sbjct: 183 LEP 191
>gb|CN140055.1|CN140055 OX1_33_F07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_F07_A002 5', mRNA sequence
Length = 431
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -2 / +2
Query: 884 VVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQL 750
V++SW +KFMTGCV+L P+A+TF+ITWWFI FVDGFF + ++
Sbjct: 248 VLQSWVPRKFMTGCVVLVPVAVTFFITWWFIQFVDGFFQSLICEI 382
Score = 48.3 bits (99), Expect(2) = 5e-024
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -2 / +3
Query: 776 FFSPIYAQLGINIFGLGFVTSVTFI 702
FFSP+YA+ G+++FGLGF+TS+ FI
Sbjct: 357 FFSPLYAKFGVDVFGLGFLTSLVFI 431
>gb|CW432657.1|CW432657 fsbb001f147h20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147h20, DNA
sequence
Length = 282
Score = 107 bits (229), Expect = 2e-022
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -2 / +1
Query: 734 GLGFVTSVTFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISA 579
GLGFVTS++FIFL+GVFMSSWLGAS+L LGE+ IKRMPLVRHIY+ASKQISA
Sbjct: 127 GLGFVTSISFIFLVGVFMSSWLGASLLGLGEFCIKRMPLVRHIYSASKQISA 282
>gb|BG159615.1|BG159615 OV2_6_G12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 515
Score = 105 bits (225), Expect = 7e-022
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -2 / +2
Query: 902 REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIN 741
R+A V++SW S+KFMTGCV+LFP+A+TF+ITWWFI FVDGFFSP+YA+ G++
Sbjct: 353 RKACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKFGVD 514
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,164,715,055
Number of Sequences: 832831
Number of extensions: 17257296
Number of successful extensions: 91905
Number of sequences better than 1.0e-020: 32
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 29731174452
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)