TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012883.2.1
(1189 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN124556.1|CN124556 RHOH1_5_C04.g1_A002 Acid- and alkali... 526 e-150
gb|CN124479.1|CN124479 RHOH1_5_C04.b1_A002 Acid- and alkali... 376 e-110
gb|CD224846.1|CD224846 CCC1_36_C07.g1_A007 Callus culture/c... 387 e-108
gb|CD224152.1|CD224152 CCC1_32_A06.b1_A007 Callus culture/c... 343 3e-095
gb|BE355291.1|BE355291 DG1_114_C02.b1_A002 Dark Grown 1 (DG... 341 9e-093
gb|BE355369.1|BE355369 DG1_114_C02.b2_A002 Dark Grown 1 (DG... 341 9e-093
gb|BE355453.1|BE355453 DG1_114_C02.g1_A002 Dark Grown 1 (DG... 274 5e-080
gb|CD224173.1|CD224173 CCC1_32_A06.g1_A007 Callus culture/c... 290 2e-079
gb|BF422269.1|BF422269 FM1_13_D07.b1_A003 Floral-Induced Me... 288 9e-077
gb|BF422211.1|BF422211 FM1_13_D07.g1_A003 Floral-Induced Me... 268 2e-075
gb|CD224745.1|CD224745 CCC1_36_C07.b1_A007 Callus culture/c... 257 2e-074
gb|CW285864.1|CW285864 104_763_11410565_148_35505_025 Sorgh... 122 2e-046
gb|CD219759.1|CD219759 CCC1_58_B12.g1_A007 Callus culture/c... 187 3e-046
gb|BE918387.1|BE918387 OV1_3_A02.g1_A002 Ovary 1 (OV1) Sorg... 183 4e-045
gb|CW028654.1|CW028654 104_255_10499222_116_30393 Sorghum m... 182 1e-044
gb|CW273362.1|CW273362 104_745_11403854_148_35717_049 Sorgh... 173 4e-042
gb|CW273361.1|CW273361 104_745_11403854_148_35359_049 Sorgh... 173 5e-042
gb|BG933290.1|BG933290 WS1_92_F03.g1_A002 Water-stressed 1 ... 155 2e-036
gb|CN126431.1|CN126431 RHOH1_17_D03.b1_A002 Acid- and alkal... 152 8e-036
gb|CD429977.1|CD429977 ETH1_16_D08.g1_A002 Ethylene-treated... 134 4e-033
gb|BF587811.1|BF587811 FM1_40_G12.g1_A003 Floral-Induced Me... 141 2e-032
gb|BF588366.1|BF588366 FM1_40_G12.b1_A003 Floral-Induced Me... 141 2e-032
gb|CN126515.1|CN126515 RHOH1_17_D03.g1_A002 Acid- and alkal... 132 1e-029
gb|CW217465.1|CW217465 104_650_11195670_148_37131_019 Sorgh... 115 2e-029
gb|CW288695.1|CW288695 104_767_11412087_116_35543_060 Sorgh... 118 1e-025
gb|CX610629.1|CX610629 ANR1_19_H04.g1_A002 Anaerobic roots ... 115 1e-024
gb|CW060871.1|CW060871 104_304_10520092_114_30143 Sorghum m... 115 2e-024
gb|CW217464.1|CW217464 104_650_11195670_116_37132_019 Sorgh... 115 2e-024
gb|CW471098.1|CW471098 fsbb001f224m06k0 Sorghum methylation... 115 2e-024
gb|CW095235.1|CW095235 104_460_11001185_116_34421_075 Sorgh... 87 4e-022
gb|CW206373.1|CW206373 104_635_11187557_148_36963_029 Sorgh... 106 5e-022
gb|CW098069.1|CW098069 104_464_11002806_116_34361_023 Sorgh... 106 7e-022
gb|CW285863.1|CW285863 104_763_11410565_116_35509_025 Sorgh... 106 7e-022
gb|BZ368144.1|BZ368144 id11f06.b1 WGS-SbicolorF (JM107 adap... 53 8e-022
gb|CW108236.1|CW108236 104_478_11097033_116_34485_033 Sorgh... 52 1e-021
gb|BZ367867.1|BZ367867 id07a07.b1 WGS-SbicolorF (JM107 adap... 52 1e-021
gb|CW496502.1|CW496502 fsbb001f288m17k0 Sorghum methylation... 52 1e-021
>gb|CN124556.1|CN124556 RHOH1_5_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_C04_A002 5', mRNA sequence
Length = 843
Score = 526 bits (1142), Expect(2) = e-150
Identities = 233/258 (90%), Positives = 238/258 (92%)
Frame = +1 / +2
Query: 64 RRPPACXSLLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESI 243
R P + S LAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIES+
Sbjct: 68 RPPASLSSPLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESL 247
Query: 244 IAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNL 423
IAKL+NLLNKL TANEES VTKASSMKAIKQRMEKDIDEVGKIA QAKTKVDELE+DNL
Sbjct: 248 IAKLTNLLNKLQTANEESKAVTKASSMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNL 427
Query: 424 SNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTG 603
NRQKPGCGKGSAVDRSREQTTGAV+KKLKERMDDFQTLREAIRQ FTVTG
Sbjct: 428 LNRQKPGCGKGSAVDRSREQTTGAVEKKLKERMDDFQTLREAIRQEYREVVERRVFTVTG 607
Query: 604 NRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQI 783
NRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQI
Sbjct: 608 NRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQI 787
Query: 784 FMDMAVLVEAQGDMINNI 837
FMDMAVLVEAQGDMINNI
Sbjct: 788 FMDMAVLVEAQGDMINNI 841
Score = 483 bits (1049), Expect = e-135
Identities = 208/246 (84%), Positives = 214/246 (86%)
Frame = -2 / -3
Query: 837 DVVDHVSLRLNKNCHVHEYXXXXXXXXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYL 658
DVVDHVSL LNKNCHVHEY *IPYSIMSLLYFSN V YLASSLMLDSIFEYL
Sbjct: 841 DVVDHVSLSLNKNCHVHEYLLQLQKLPL*IPYSIMSLLYFSNCVQYLASSLMLDSIFEYL 662
Query: 657 LTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXX 478
LTFS LYQ+INCLFIRTITSYSKNPSF+NL ILLPDCFSQGLKIIHP LQFLF+C
Sbjct: 661 LTFSSLYQIINCLFIRTITSYSKNPSFNNLPILLPDCFSQGLKIIHPLLQFLFYCSSSLL 482
Query: 477 XXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXX 298
SVHGRTLSTSRFLPI+*VI FQFINFCLCL SNFPHFINIFLHPLLNCFHGTCFCN
Sbjct: 481 S*SVHGRTLSTSRFLPIQ*VIFFQFINFCLCLTSNFPHFINIFLHPLLNCFHGTCFCNCF 302
Query: 297 GFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGI 118
GFLICS ELIQ*I QLCN TLNCIDLLQEI VV*SISLMHSHFN+ +S*GVPPRELKGI
Sbjct: 301 GFLICSLELIQ*ICQLCN*TLNCIDLLQEIL*VV*SISLMHSHFNVRIS*GVPPRELKGI 122
Query: 117 REEVVH 100
REEVVH
Sbjct: 121 REEVVH 104
Score = 470 bits (1021), Expect = e-131
Identities = 212/247 (85%), Positives = 215/247 (87%)
Frame = -3 / -1
Query: 839 SMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNI 660
SMLLIMSP ASTRTAMSMNICCNS+SFLSRSLTASCRSCISATVSSIWPLP*CWIASLNI
Sbjct: 843 SMLLIMSP*ASTRTAMSMNICCNSKSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNI 664
Query: 659 CSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVC 480
CSLFP SGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFF TAPVVC
Sbjct: 663 CSLFPVSIKSSIVSSSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFSTAPVVC 484
Query: 479 SLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTX 300
SLDRSTAEPFPHPGFCLF++LS SSSSTFVFA* AIFPTSSISFSIRCLIAFMELAFVT
Sbjct: 483 SLDRSTAEPFPHPGFCLFNKLSFSSSSTFVFA*RAIFPTSSISFSIRCLIAFMELAFVTA 304
Query: 299 XDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKE 120
DSSFAVWSLFNRF SFAI LSIASTFFKKSFKL SLEESRRGSSKE
Sbjct: 303 LDSSFAVWSLFNRFVSFAIKLSIASTFFKKSFKLSEASA*CIPISMSASLEESRRGSSKE 124
Query: 119 SVRRLFM 99
SVRRLFM
Sbjct: 123 SVRRLFM 103
Score = 343 bits (743), Expect(2) = e-117
Identities = 150/162 (92%), Positives = 154/162 (95%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SSGWRKILMKWGKLL+RQRQKLMNWK+ITY IGKNLDVERVLPWTDQES+LLEQ*KRN*R
Sbjct: 339 SSGWRKILMKWGKLLVRQRQKLMNWKKITY*IGKNLDVERVLPWTDQESRLLEQ*KRN*R 518
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIREE 694
+GWMIFRP*EKQSGKSI RL KEGFLL*LVIVLMKRQLM **R EKVSKYSKMLSNIREE
Sbjct: 519 SGWMIFRP*EKQSGKSIGRLLKEGFLL*LVIVLMKRQLMI**RLEKVSKYSKMLSNIREE 698
Query: 695 ARY*TLLLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLRRKE 820
ARY T LLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLR KE
Sbjct: 699 ARYWTQLLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLRLKE 824
Score = 335 bits (726), Expect(3) = e-131
Identities = 147/175 (84%), Positives = 151/175 (86%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQPPHGFL*APSAGLLKR +*NGNASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*
Sbjct: 97 RRHEQPPHGFL*APSAGLLKRCGH*NGNASG*CFRQLKGFLEEGRCN*EFNCKADKSIE* 276
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWK 452
AP CK*GI SYKSKFHESN*AADGERY**SGENC R* IE*AKTWMWK
Sbjct: 277 APDCK*GIQSSYKSKFHESN*AADGERY**SGENCSSGKDKS**TGKR*LIE*AKTWMWK 456
Query: 453 GFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS** 617
GFCRGPIKRA+YWSS KEIEG DG*FSDLERSNQARVS GC KKGFYCNW*SS**
Sbjct: 457 GFCRGPIKRADYWSSRKEIEGADG*FSDLERSNQARVSGGC*KKGFYCNW*SS** 621
Score = 308 bits (666), Expect(2) = e-113
Identities = 134/156 (85%), Positives = 138/156 (88%)
Frame = -1 / -2
Query: 820 LLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAHFFRX 641
LL PQQELPCP*ISVATP+ASSLDPLQHHVAPVFQQ C VSGLFPDVG*HL*IFAHFF+
Sbjct: 824 LLEPQQELPCP*ISVATPKASSLDPLQHHVAPVFQQLCPVSGLFPDVG*HL*IFAHFFQS 645
Query: 640 XXXXXXXXXQDDYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPR 461
QDDYQLQ*KPFF+QP DTLA*LLLSRSENHPS PSISF LLQ* ALLIGPR
Sbjct: 644 LSNHQLSLHQDDYQLQ*KPFFQQPPDTLA*LLLSRSENHPSAPSISFLLLQ*SALLIGPR 465
Query: 460 QNPFHIQVFAYSIGYLFPVHQLLSLPEEQFSPLHQY 353
QNPFHIQVFAYSI YLFPVHQLLSLP+EQFSPLHQY
Sbjct: 464 QNPFHIQVFAYSISYLFPVHQLLSLPDEQFSPLHQY 357
Score = 150 bits (322), Expect(3) = e-131
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +3 / +1
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
KK*ANIQRCYPTSGKRPDT H C*NTGAT*CCKGSREEA GVATDIHGHGSSC*G+RRHD
Sbjct: 652 KK*ANIQRCYPTSGKRPDTGHSC*NTGAT*CCKGSREEAFGVATDIHGHGSSC*GSRRHD 831
Query: 828 QQHR 839
QQHR
Sbjct: 832 QQHR 843
Score = 123 bits (264), Expect(2) = e-113
Identities = 53/61 (86%), Positives = 54/61 (88%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRNP 116
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDAFPFQ LLRSPAEGAQRNP
Sbjct: 299 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDAFPFQCPHLLRSPAEGAQRNP 120
Query: 115 * 113
*
Sbjct: 119 * 117
Score = 101 bits (216), Expect(2) = e-117
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GGTPQE + LKWECIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 141 GGTPQEMRTLKWECIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 299
Score = 28.1 bits (55), Expect(2) = e-150
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1 / +3
Query: 13 HLPRSRXRLCPAGLRSPRRPPA 78
H R GLRSPRRPPA
Sbjct: 6 HPLRRNGHTSSPGLRSPRRPPA 71
Score = 23.5 bits (45), Expect(3) = e-131
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1 / +1
Query: 43 PAGLRSPRRPPACXSLLAA 99
PA + RPPA SLLAA
Sbjct: 40 PASVLLAARPPARLSLLAA 96
>gb|CN124479.1|CN124479 RHOH1_5_C04.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_5_C04_A002 3', mRNA sequence
Length = 850
Score = 376 bits (816), Expect(3) = e-110
Identities = 162/193 (83%), Positives = 166/193 (86%)
Frame = +1 / +2
Query: 430 RQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNR 609
RQKPGCGKGSAVDRSREQTTGAV+KKLKERMDDFQTLREAIRQ FTVTGNR
Sbjct: 2 RQKPGCGKGSAVDRSREQTTGAVEKKLKERMDDFQTLREAIRQEYREVVERRVFTVTGNR 181
Query: 610 PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFM 789
PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFM
Sbjct: 182 PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFM 361
Query: 790 DMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXXXX 969
DMAVLVEAQGDMINNIETHVSNATNHIQQGV+ALQ+AKKLQ+NSRKWMCY
Sbjct: 362 DMAVLVEAQGDMINNIETHVSNATNHIQQGVTALQSAKKLQKNSRKWMCYAIILLLVIVV 541
Query: 970 XXXXXXXQPWKKG 1008
QPWKKG
Sbjct: 542 VIVVAVIQPWKKG 580
Score = 362 bits (785), Expect(3) = e-107
Identities = 155/193 (80%), Positives = 157/193 (81%)
Frame = -3 / -2
Query: 1007 PFFHGWXXXXXXXXXXXXXXXXXXXXHFLEFLCSFFAFWSALTPCCMWLVAFETWVSMLL 828
PFFHGW HFLEF CSFFA WSA+TPCCM LVAFET VSMLL
Sbjct: 579 PFFHGWMTATTMTTTITSSRMMA*HIHFLEFFCSFFALWSAVTPCCM*LVAFETCVSMLL 400
Query: 827 IMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 648
IMSP ASTRTAMSMNICCNS+SFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF
Sbjct: 399 IMSP*ASTRTAMSMNICCNSKSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 220
Query: 647 PXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDR 468
P SGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFF TAPVVCSLDR
Sbjct: 219 PVSIKSSIVSSSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFSTAPVVCSLDR 40
Query: 467 STAEPFPHPGFCL 429
STAEPFPHPGFCL
Sbjct: 39 STAEPFPHPGFCL 1
Score = 320 bits (694), Expect(3) = 3e-092
Identities = 139/171 (81%), Positives = 144/171 (84%)
Frame = -2 / -1
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G+AHPLPRI LQFLR LE HTLLYV+GGVRDM LDVVDHVSL LNKNCHVHEY
Sbjct: 514 GIAHPLPRILLQFLRALECGHTLLYVIGGVRDMCLDVVDHVSLSLNKNCHVHEYLLQLQK 335
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNP 583
*IPYSIMSLLYFSN V YLASSLMLDSIFEYLLTFS LYQ+INCLFIRTITSYSKNP
Sbjct: 334 LPL*IPYSIMSLLYFSNCVQYLASSLMLDSIFEYLLTFSSLYQIINCLFIRTITSYSKNP 155
Query: 582 SFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLP 430
SF+NL ILLPDCFSQGLKIIHP LQFLF+C SVHGRTLSTSRFLP
Sbjct: 154 SFNNLPILLPDCFSQGLKIIHPLLQFLFYCSSSLLS*SVHGRTLSTSRFLP 2
Score = 311 bits (674), Expect(4) = e-101
Identities = 141/171 (82%), Positives = 143/171 (83%)
Frame = +2 / +3
Query: 431 GKNLDVERVLPWTDQESKLLEQ*KRN*RNGWMIFRP*EKQSGKSIERLSKEGFLL*LVIV 610
GKNLDVERVLPWTDQES+LLEQ*KRN*R+GWMIFRP*EKQSGKSI RL KEGFLL*LVIV
Sbjct: 3 GKNLDVERVLPWTDQESRLLEQ*KRN*RSGWMIFRP*EKQSGKSIGRLLKEGFLL*LVIV 182
Query: 611 LMKRQLMT**RPEKVSKYSKMLSNIREEARY*TLLLKYRSDMML*GI*RGSFWSCNRYSW 790
LMKRQLM **R EKVSKYSKMLSNIREEARY T LLKYRSDMML*GI*RGSFWSCNRYSW
Sbjct: 183 LMKRQLMI**RLEKVSKYSKMLSNIREEARYWTQLLKYRSDMML*GI*RGSFWSCNRYSW 362
Query: 791 TWQFLLRRKEXXXXXXXXXXXXXXXXYSKV*ARSRTRRNCRGIRGSGCATP 943
TWQFLLR KE YSKV* SR RRNCR IRGSGCA P
Sbjct: 363 TWQFLLRLKET*STTSRHMSRTPPITYSKV*PHSRARRNCRRIRGSGCAMP 515
Score = 297 bits (642), Expect = 3e-079
Identities = 138/192 (71%), Positives = 141/192 (73%)
Frame = -1 / -3
Query: 1006 PSSMAG*LRRQ*PRLSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGWWXXXXXXXXXX 827
PSSMAG* RRQ*P LSPAV *W SHLAVC WW
Sbjct: 578 PSSMAG*PRRQ*PPLSPAVG*WHSTSTSSNSSAVSSRSGVRSHLAVCDWWRSRHVSRCC* 399
Query: 826 XCLLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAHFF 647
CLL PQQELPCP*ISVATP+ASSLDPLQHHVAPVFQQ C VSGLFPDVG*HL*IFAHFF
Sbjct: 398 SCLLEPQQELPCP*ISVATPKASSLDPLQHHVAPVFQQLCPVSGLFPDVG*HL*IFAHFF 219
Query: 646 RXXXXXXXXXXQDDYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIG 467
+ QDDYQLQ*KPFF+QP DTLA*LLLSRSENHPS PSISF LLQ* ALLIG
Sbjct: 218 QSLSNHQLSLHQDDYQLQ*KPFFQQPPDTLA*LLLSRSENHPSAPSISFLLLQ*SALLIG 39
Query: 466 PRQNPFHIQVFA 431
PRQNPFHIQVFA
Sbjct: 38 PRQNPFHIQVFA 3
Score = 174 bits (375), Expect(3) = 3e-079
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3 / +1
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
KK*ANIQRCYPTSGKRPDT H C*NTGAT*CCKGSREEA GVATDIHGHGSSC*G+RRHD
Sbjct: 220 KK*ANIQRCYPTSGKRPDTGHSC*NTGAT*CCKGSREEAFGVATDIHGHGSSC*GSRRHD 399
Query: 828 QQHRDPCLERHQPHT 872
QQHRD CLERHQ HT
Sbjct: 400 QQHRDTCLERHQSHT 444
Score = 143 bits (306), Expect(3) = 3e-079
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3 / +1
Query: 429 *AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*S 608
*AKTWMWKGFCRGPIKRA+YWSS KEIEG DG*FSDLERSNQARVS GC KKGFYCNW*S
Sbjct: 1 *AKTWMWKGFCRGPIKRADYWSSRKEIEGADG*FSDLERSNQARVSGGC*KKGFYCNW*S 180
Query: 609 S** 617
S**
Sbjct: 181 S** 189
Score = 60.2 bits (125), Expect(4) = e-101
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3 / +1
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEEG 1007
VDVL HH TAGDS GHCRR HPAMEEG
Sbjct: 499 VDVLCHHPTAGDSGGHCRRGHPAMEEG 579
Score = 37.3 bits (75), Expect(3) = e-110
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +2
Query: 1088 LYL*STQQELWHFDSFCLVKG 1150
LYL ST Q+LWHF SFC+ G
Sbjct: 698 LYLWSTHQKLWHFYSFCVCGG 760
Score = 34.5 bits (69), Expect(3) = e-107
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 1137 QNESKCQSSCCVDYRYNN 1084
QNE KCQS CVD+RYN+
Sbjct: 747 QNE*KCQSF*CVDHRYND 694
Score = 34.1 bits (68), Expect(3) = e-107
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 1069 PQKKLHTYYTNRKK 1028
P KKLHTYYTN KK
Sbjct: 675 PHKKLHTYYTNSKK 634
Score = 32.2 bits (64), Expect(4) = e-101
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 1089 CTYSRRNRSSGISIHSV 1139
CTY R RS GISIHSV
Sbjct: 699 CTYGRHIRSFGISIHSV 749
Score = 31.3 bits (62), Expect(3) = 3e-092
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 1136 RMNRNARAPVASTIGTT 1086
RMNRNA+A STIGTT
Sbjct: 746 RMNRNAKASDVSTIGTT 696
Score = 28.6 bits (56), Expect(3) = 3e-092
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 1064 KKTAHILHKQEK 1029
+KTAHILHKQ+K
Sbjct: 670 QKTAHILHKQQK 635
Score = 28.1 bits (55), Expect(3) = e-110
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 1029 FFLFV*YVCSFFCG 1070
F LFV*YVCSF G
Sbjct: 635 FLLFV*YVCSFLWG 676
Score = 26.3 bits (51), Expect(4) = e-101
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 1030 FSCLCNMCA 1056
F CLCNMCA
Sbjct: 636 FCCLCNMCA 662
Score = 24.4 bits (47), Expect(3) = 3e-079
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 1093 PIVDATGALAFRFIL 1137
P+VD + ALAF FIL
Sbjct: 703 PMVDTSEALAFLFIL 747
>gb|CD224846.1|CD224846 CCC1_36_C07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_C07_A007 5', mRNA sequence
Length = 671
Score = 387 bits (840), Expect(2) = e-108
Identities = 172/191 (90%), Positives = 175/191 (91%)
Frame = +1 / +1
Query: 85 SLLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNL 264
S LAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIES+IAKL+NL
Sbjct: 97 SPLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESLIAKLTNL 276
Query: 265 LNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPG 444
LNKL TANEES VTKASSMKAIKQRMEKDIDEVGKIA QAKTKVDELE+DNL NRQKPG
Sbjct: 277 LNKLQTANEESKAVTKASSMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLLNRQKPG 456
Query: 445 CGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEET 624
CGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ FTVTGNRPDEET
Sbjct: 457 CGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQEYREVVERRVFTVTGNRPDEET 636
Query: 625 IDDLIETGKSE 657
IDDLIETGKSE
Sbjct: 637 IDDLIETGKSE 669
Score = 380 bits (825), Expect = e-104
Identities = 160/186 (86%), Positives = 166/186 (89%)
Frame = -2 / -3
Query: 657 LTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXX 478
LTFS LYQ+INCLFIRTITSYSKNPSF+NL ILLPDCFSQGLKIIHP LQFLF+C
Sbjct: 669 LTFSSLYQIINCLFIRTITSYSKNPSFNNLPILLPDCFSQGLKIIHPLLQFLFYCSSSLL 490
Query: 477 XXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXX 298
SVHGRTLSTSRFLPI+*VI FQFINFCLCL SNFPHFINIFLHPLLNCFHGTCFCN
Sbjct: 489 S*SVHGRTLSTSRFLPIQ*VIFFQFINFCLCLTSNFPHFINIFLHPLLNCFHGTCFCNCF 310
Query: 297 GFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGI 118
GFLICS ELIQ*I QLCN TLNCIDLLQEI VV*SISLMHSHFN+ +S*GVPPRELKGI
Sbjct: 309 GFLICSLELIQ*ICQLCN*TLNCIDLLQEIL*VV*SISLMHSHFNVRIS*GVPPRELKGI 130
Query: 117 REEVVH 100
REEVVH
Sbjct: 129 REEVVH 112
Score = 339 bits (735), Expect = 4e-092
Identities = 155/187 (82%), Positives = 157/187 (83%)
Frame = -3 / -1
Query: 659 CSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVC 480
CSLFP SGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVC
Sbjct: 671 CSLFPVSIKSSIVSSSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVC 492
Query: 479 SLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTX 300
SLDRSTAEPFPHPGFCLF++LS SSSSTFVFA* AIFPTSSISFSIRCLIAFMELAFVT
Sbjct: 491 SLDRSTAEPFPHPGFCLFNKLSFSSSSTFVFA*RAIFPTSSISFSIRCLIAFMELAFVTA 312
Query: 299 XDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKE 120
DSSFAVWSLFNRF SFAI LSIASTFFKKSFKL SLEESRRGSSKE
Sbjct: 311 LDSSFAVWSLFNRFVSFAIKLSIASTFFKKSFKLSEASA*CIPISMSASLEESRRGSSKE 132
Query: 119 SVRRLFM 99
SVRRLFM
Sbjct: 131 SVRRLFM 111
Score = 336 bits (727), Expect(2) = 2e-091
Identities = 147/175 (84%), Positives = 152/175 (86%)
Frame = +3 / +3
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQPPHGFL*APSAGLLKR +*NGNASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*
Sbjct: 105 RRHEQPPHGFL*APSAGLLKRCGH*NGNASG*CFRQLKGFLEEGRCN*EFNCKADKSIE* 284
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWK 452
AP CK*GI SYKSKFHESN*AADGERY**SGENC R* IE*AKTWMWK
Sbjct: 285 APDCK*GIQSSYKSKFHESN*AADGERY**SGENCSSGKDKS**TGKR*LIE*AKTWMWK 464
Query: 453 GFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS** 617
GFCRGPIKRA+YWSS+KEIEG DG*FSDLERSNQARVS GC KKGFYCNW*SS**
Sbjct: 465 GFCRGPIKRADYWSSKKEIEGADG*FSDLERSNQARVSGGC*KKGFYCNW*SS** 629
Score = 223 bits (482), Expect(2) = 2e-081
Identities = 99/108 (91%), Positives = 103/108 (95%)
Frame = +2 / +2
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SSGWRKILMKWGKLL+RQRQKLMNWK+ITY IGKNLDVERVLPWTDQES+LLEQ*KRN*R
Sbjct: 347 SSGWRKILMKWGKLLVRQRQKLMNWKKITY*IGKNLDVERVLPWTDQESRLLEQ*KRN*R 526
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVS 658
+GWMIFRP*EKQSGKSI RL KEGFLL*LVIVLMKRQLM **R EKVS
Sbjct: 527 SGWMIFRP*EKQSGKSIGRLLKEGFLL*LVIVLMKRQLMI**RLEKVS 670
Score = 193 bits (416), Expect(2) = 5e-079
Identities = 84/102 (82%), Positives = 87/102 (85%)
Frame = -1 / -2
Query: 658 AHFFRXXXXXXXXXXQDDYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FA 479
AHFF+ QDDYQLQ*KPFF+QP DTLA*LLLSRSENHPS PSISF LLQ* A
Sbjct: 670 AHFFQSLSNHQLSLHQDDYQLQ*KPFFQQPPDTLA*LLLSRSENHPSAPSISFLLLQ*SA 491
Query: 478 LLIGPRQNPFHIQVFAYSIGYLFPVHQLLSLPEEQFSPLHQY 353
LLIGPRQNPFHIQVFAYSI YLFPVHQLLSLP+EQFSPLHQY
Sbjct: 490 LLIGPRQNPFHIQVFAYSISYLFPVHQLLSLPDEQFSPLHQY 365
Score = 123 bits (264), Expect(2) = 5e-079
Identities = 53/61 (86%), Positives = 54/61 (88%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRNP 116
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDAFPFQ LLRSPAEGAQRNP
Sbjct: 307 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDAFPFQCPHLLRSPAEGAQRNP 128
Query: 115 * 113
*
Sbjct: 127 * 125
Score = 101 bits (216), Expect(2) = 2e-081
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +2 / +2
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GGTPQE + LKWECIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 149 GGTPQEMRTLKWECIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 307
Score = 27.6 bits (54), Expect(2) = e-108
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 49 GLRSPRRPPA 78
GLRSPRRPPA
Sbjct: 43 GLRSPRRPPA 72
Score = 22.6 bits (43), Expect(2) = 2e-091
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 43 PAGLRSPRRPPACXSLLAA 99
PA RPPA SLLAA
Sbjct: 41 PASALLAARPPARLSLLAA 97
>gb|CD224152.1|CD224152 CCC1_32_A06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_A06_A007 3', mRNA sequence
Length = 672
Score = 343 bits (743), Expect(2) = 3e-095
Identities = 149/179 (83%), Positives = 152/179 (84%)
Frame = +1 / +3
Query: 472 SREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGK 651
SREQTTGAVKKKLKERMDDFQTLREAIRQ FTVTGNRPDEETIDDLIETGK
Sbjct: 3 SREQTTGAVKKKLKERMDDFQTLREAIRQEYREVVERRVFTVTGNRPDEETIDDLIETGK 182
Query: 652 SEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMIN 831
SEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMIN
Sbjct: 183 SEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMIN 362
Query: 832 NIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXXXXXXXXXXXQPWKKG 1008
NIETHVSNATNHIQQGV+ALQ+AKKLQ+NSRKWMCY QPWKKG
Sbjct: 363 NIETHVSNATNHIQQGVTALQSAKKLQKNSRKWMCYAIILLLVIVVVIVVAVIQPWKKG 539
Score = 328 bits (710), Expect(2) = 2e-092
Identities = 142/179 (79%), Positives = 144/179 (80%)
Frame = -3 / -3
Query: 1007 PFFHGWXXXXXXXXXXXXXXXXXXXXHFLEFLCSFFAFWSALTPCCMWLVAFETWVSMLL 828
PFFHGW HFLEF CSFFA WSA+TPCCM LVAFET VSMLL
Sbjct: 538 PFFHGWMTATTMTTTITSSRMMA*HIHFLEFFCSFFALWSAVTPCCM*LVAFETCVSMLL 359
Query: 827 IMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 648
IMSP ASTRTAMSMNICCNS+SFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF
Sbjct: 358 IMSP*ASTRTAMSMNICCNSKSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 179
Query: 647 PXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLD 471
P SGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLD
Sbjct: 178 PVSIKSSIVSSSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLD 2
Score = 292 bits (633), Expect(2) = 3e-080
Identities = 125/150 (83%), Positives = 130/150 (86%)
Frame = -2 / -2
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G+AHPLPRI LQFLR LE HTLLYV+GGVRDM LDVVDHVSL LNKNCHVHEY
Sbjct: 473 GIAHPLPRILLQFLRALECGHTLLYVIGGVRDMCLDVVDHVSLSLNKNCHVHEYLLQLQK 294
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNP 583
*IPYSIMSLLYFSN V YLASSLMLDSIFEYLLTFS LYQ+INCLFIRTITSYSKNP
Sbjct: 293 LPL*IPYSIMSLLYFSNCVQYLASSLMLDSIFEYLLTFSSLYQIINCLFIRTITSYSKNP 114
Query: 582 SFDNLSILLPDCFSQGLKIIHPFLQFLFHC 493
SF+NL ILLPDCFSQGLKIIHP LQFLF+C
Sbjct: 113 SFNNLPILLPDCFSQGLKIIHPLLQFLFYC 24
Score = 278 bits (602), Expect(3) = 1e-087
Identities = 128/158 (81%), Positives = 130/158 (82%)
Frame = +2 / +1
Query: 470 DQESKLLEQ*KRN*RNGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPE 649
DQES+LLEQ*KRN*R+GWMIFRP*EKQSGKSI RL KEGFLL*LVIVLMKRQLM **R E
Sbjct: 1 DQESRLLEQ*KRN*RSGWMIFRP*EKQSGKSIGRLLKEGFLL*LVIVLMKRQLMI**RLE 180
Query: 650 KVSKYSKMLSNIREEARY*TLLLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLRRKEXXX 829
KVSKYSKMLSNIREEARY T LLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLR KE
Sbjct: 181 KVSKYSKMLSNIREEARYWTQLLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLRLKET*S 360
Query: 830 XXXXXXXXXXXXXYSKV*ARSRTRRNCRGIRGSGCATP 943
YSKV* SR RRNCR IRGSGCA P
Sbjct: 361 TTSRHMSRTPPITYSKV*PHSRARRNCRRIRGSGCAMP 474
Score = 263 bits (569), Expect = 4e-069
Identities = 125/179 (69%), Positives = 128/179 (71%)
Frame = -1 / -1
Query: 1006 PSSMAG*LRRQ*PRLSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGWWXXXXXXXXXX 827
PSSMAG* RRQ*P LSPAV *W SHLAVC WW
Sbjct: 537 PSSMAG*PRRQ*PPLSPAVG*WHSTSTSSNSSAVSSRSGVRSHLAVCDWWRSRHVSRCC* 358
Query: 826 XCLLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAHFF 647
CLL PQQELPCP*ISVATP+ASSLDPLQHHVAPVFQQ C VSGLFPDVG*HL*IFAHFF
Sbjct: 357 SCLLEPQQELPCP*ISVATPKASSLDPLQHHVAPVFQQLCPVSGLFPDVG*HL*IFAHFF 178
Query: 646 RXXXXXXXXXXQDDYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLI 470
+ QDDYQLQ*KPFF+QP DTLA*LLLSRSENHPS PSISF LLQ* ALLI
Sbjct: 177 QSLSNHQLSLHQDDYQLQ*KPFFQQPPDTLA*LLLSRSENHPSAPSISFLLLQ*SALLI 1
Score = 174 bits (375), Expect(2) = 2e-067
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
KK*ANIQRCYPTSGKRPDT H C*NTGAT*CCKGSREEA GVATDIHGHGSSC*G+RRHD
Sbjct: 179 KK*ANIQRCYPTSGKRPDTGHSC*NTGAT*CCKGSREEAFGVATDIHGHGSSC*GSRRHD 358
Query: 828 QQHRDPCLERHQPHT 872
QQHRD CLERHQ HT
Sbjct: 359 QQHRDTCLERHQSHT 403
Score = 104 bits (221), Expect(2) = 2e-067
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +3 / +2
Query: 471 IKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS** 617
IKRA+YWSS+KEIEG DG*FSDLERSNQARVS GC KKGFYCNW*SS**
Sbjct: 2 IKRADYWSSKKEIEGADG*FSDLERSNQARVSGGC*KKGFYCNW*SS** 148
Score = 60.2 bits (125), Expect(3) = 1e-087
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEEG 1007
VDVL HH TAGDS GHCRR HPAMEEG
Sbjct: 458 VDVLCHHPTAGDSGGHCRRGHPAMEEG 538
Score = 34.1 bits (68), Expect(2) = 2e-092
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 1069 PQKKLHTYYTNRKK 1028
P KKLHTYYTN KK
Sbjct: 634 PHKKLHTYYTNSKK 593
Score = 28.6 bits (56), Expect(2) = 3e-080
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -2
Query: 1064 KKTAHILHKQEK 1029
+KTAHILHKQ+K
Sbjct: 629 QKTAHILHKQQK 594
Score = 28.1 bits (55), Expect(2) = 3e-095
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 1029 FFLFV*YVCSFFCG 1070
F LFV*YVCSF G
Sbjct: 594 FLLFV*YVCSFLWG 635
Score = 26.3 bits (51), Expect(3) = 1e-087
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1030 FSCLCNMCA 1056
F CLCNMCA
Sbjct: 595 FCCLCNMCA 621
>gb|BE355291.1|BE355291 DG1_114_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 341 bits (740), Expect = 9e-093
Identities = 151/165 (91%), Positives = 155/165 (93%)
Frame = +1 / +2
Query: 64 RRPPACXSLLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESI 243
R P + S LAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIES+
Sbjct: 14 RPPASLSSPLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESL 193
Query: 244 IAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNL 423
IAKL+NLLNKL TANEES VTKASSMKAIKQRMEKDIDEVGKIA QAKTKVDELE+DNL
Sbjct: 194 IAKLTNLLNKLQTANEESKAVTKASSMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNL 373
Query: 424 SNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
NRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ
Sbjct: 374 LNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 508
Score = 319 bits (691), Expect = 5e-086
Identities = 135/158 (85%), Positives = 139/158 (87%)
Frame = -2 / -1
Query: 573 NLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINF 394
NL ILLPDCFSQGLKIIHP LQFLF+C SVHGRTLSTSRFLPI+*VI FQFINF
Sbjct: 523 NLPILLPDCFSQGLKIIHPLLQFLFYCSSSLLS*SVHGRTLSTSRFLPIQ*VIFFQFINF 344
Query: 393 CLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQ 214
CLCL SNFPHFINIFLHPLLNCFHGTCFCN GFLICS ELIQ*I QLCN TLNCIDLLQ
Sbjct: 343 CLCLTSNFPHFINIFLHPLLNCFHGTCFCNCFGFLICSLELIQ*ICQLCN*TLNCIDLLQ 164
Query: 213 EIFQVV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
EI VV*SISLMHSHFN+ +S*GVPPRELKGIREEVVH
Sbjct: 163 EIL*VV*SISLMHSHFNVRIS*GVPPRELKGIREEVVH 50
Score = 303 bits (656), Expect = 4e-081
Identities = 133/160 (83%), Positives = 138/160 (86%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQPPHGFL*APSAGLLKR +*NGNASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*
Sbjct: 43 RRHEQPPHGFL*APSAGLLKRCGH*NGNASG*CFRQLKGFLEEGRCN*EFNCKADKSIE* 222
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWK 452
AP CK*GI SYKSKFHESN*AADGERY**SGENC R* IE*AKTWMWK
Sbjct: 223 APDCK*GIQSSYKSKFHESN*AADGERY**SGENCSSGKDKS**TGKR*LIE*AKTWMWK 402
Query: 453 GFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRG 572
GFCRGPIKRA+YWSS+KEIEG DG*FSDLERSNQARVS G
Sbjct: 403 GFCRGPIKRADYWSSKKEIEGADG*FSDLERSNQARVSGG 522
Score = 299 bits (648), Expect = 4e-080
Identities = 136/158 (86%), Positives = 138/158 (87%)
Frame = -3 / -2
Query: 572 TSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTF 393
TSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLF++LS SSSSTF
Sbjct: 522 TSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFNKLSFSSSSTF 343
Query: 392 VFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFK 213
VFA* AIFPTSSISFSIRCLIAFMELAFVT DSSFAVWSLFNRF SFAI LSIASTFFK
Sbjct: 342 VFA*RAIFPTSSISFSIRCLIAFMELAFVTALDSSFAVWSLFNRFVSFAIKLSIASTFFK 163
Query: 212 KSFKLXXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
KSFKL SLEESRRGSSKESVRRLFM
Sbjct: 162 KSFKLSEASA*CIPISMSASLEESRRGSSKESVRRLFM 49
Score = 176 bits (379), Expect(2) = 2e-067
Identities = 73/79 (92%), Positives = 77/79 (97%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SSGWRKILMKWGKLL+RQRQKLMNWK+ITY IGKNLDVERVLPWTDQES+LLEQ*KRN*R
Sbjct: 285 SSGWRKILMKWGKLLVRQRQKLMNWKKITY*IGKNLDVERVLPWTDQESRLLEQ*KRN*R 464
Query: 515 NGWMIFRP*EKQSGKSIER 571
+GWMIFRP*EKQSGKSI R
Sbjct: 465 SGWMIFRP*EKQSGKSIGR 521
Score = 156 bits (335), Expect(2) = 6e-068
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = -1 / -3
Query: 571 PLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAYSIGYLFPVHQLL 392
P DTLA*LLLSRSENHPS PSISF LLQ* ALLIGPRQNPFHIQVFAYSI YLFPVHQLL
Sbjct: 521 PPDTLA*LLLSRSENHPSAPSISFLLLQ*SALLIGPRQNPFHIQVFAYSISYLFPVHQLL 342
Query: 391 SLPEEQFSPLHQY 353
SLP+EQFSPLHQY
Sbjct: 341 SLPDEQFSPLHQY 303
Score = 123 bits (264), Expect(2) = 6e-068
Identities = 53/61 (86%), Positives = 54/61 (88%)
Frame = -1 / -3
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRNP 116
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDAFPFQ LLRSPAEGAQRNP
Sbjct: 245 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDAFPFQCPHLLRSPAEGAQRNP 66
Query: 115 * 113
*
Sbjct: 65 * 63
Score = 101 bits (216), Expect(2) = 2e-067
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GGTPQE + LKWECIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 87 GGTPQEMRTLKWECIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 245
>gb|BE355369.1|BE355369 DG1_114_C02.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 511
Score = 341 bits (740), Expect = 9e-093
Identities = 151/165 (91%), Positives = 155/165 (93%)
Frame = +1 / +2
Query: 64 RRPPACXSLLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESI 243
R P + S LAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIES+
Sbjct: 14 RPPASLSSPLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESL 193
Query: 244 IAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNL 423
IAKL+NLLNKL TANEES VTKASSMKAIKQRMEKDIDEVGKIA QAKTKVDELE+DNL
Sbjct: 194 IAKLTNLLNKLQTANEESKAVTKASSMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNL 373
Query: 424 SNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
NRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ
Sbjct: 374 LNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 508
Score = 313 bits (678), Expect = 3e-084
Identities = 132/154 (85%), Positives = 136/154 (88%)
Frame = -2 / -1
Query: 561 LLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCL 382
LLPDCFSQGLKIIHP LQFLF+C SVHGRTLSTSRFLPI+*VI FQFINFCLCL
Sbjct: 511 LLPDCFSQGLKIIHPLLQFLFYCSSSLLS*SVHGRTLSTSRFLPIQ*VIFFQFINFCLCL 332
Query: 381 RSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQ 202
SNFPHFINIFLHPLLNCFHGTCFCN GFLICS ELIQ*I QLCN TLNCIDLLQEI
Sbjct: 331 TSNFPHFINIFLHPLLNCFHGTCFCNCFGFLICSLELIQ*ICQLCN*TLNCIDLLQEIL* 152
Query: 201 VV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
VV*SISLMHSHFN+ +S*GVPPRELKGIREEVVH
Sbjct: 151 VV*SISLMHSHFNVRIS*GVPPRELKGIREEVVH 50
Score = 297 bits (644), Expect = 2e-079
Identities = 130/156 (83%), Positives = 135/156 (86%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQPPHGFL*APSAGLLKR +*NGNASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*
Sbjct: 43 RRHEQPPHGFL*APSAGLLKRCGH*NGNASG*CFRQLKGFLEEGRCN*EFNCKADKSIE* 222
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWK 452
AP CK*GI SYKSKFHESN*AADGERY**SGENC R* IE*AKTWMWK
Sbjct: 223 APDCK*GIQSSYKSKFHESN*AADGERY**SGENCSSGKDKS**TGKR*LIE*AKTWMWK 402
Query: 453 GFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQAR 560
GFCRGPIKRA+YWSS+KEIEG DG*FSDLERSNQAR
Sbjct: 403 GFCRGPIKRADYWSSKKEIEGADG*FSDLERSNQAR 510
Score = 290 bits (627), Expect = 4e-077
Identities = 132/154 (85%), Positives = 134/154 (87%)
Frame = -3 / -2
Query: 560 SCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA* 381
SCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLF++LS SSSSTFVFA*
Sbjct: 510 SCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFNKLSFSSSSTFVFA* 331
Query: 380 GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFK 201
AIFPTSSISFSIRCLIAFMELAFVT DSSFAVWSLFNRF SFAI LSIASTFFKKSFK
Sbjct: 330 RAIFPTSSISFSIRCLIAFMELAFVTALDSSFAVWSLFNRFVSFAIKLSIASTFFKKSFK 151
Query: 200 LXXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
L SLEESRRGSSKESVRRLFM
Sbjct: 150 LSEASA*CIPISMSASLEESRRGSSKESVRRLFM 49
Score = 171 bits (368), Expect(2) = 7e-066
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SSGWRKILMKWGKLL+RQRQKLMNWK+ITY IGKNLDVERVLPWTDQES+LLEQ*KRN*R
Sbjct: 285 SSGWRKILMKWGKLLVRQRQKLMNWKKITY*IGKNLDVERVLPWTDQESRLLEQ*KRN*R 464
Query: 515 NGWMIFRP*EKQSGK 559
+GWMIFRP*EKQSGK
Sbjct: 465 SGWMIFRP*EKQSGK 509
Score = 149 bits (320), Expect(2) = 7e-066
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = -1 / -3
Query: 559 LA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAYSIGYLFPVHQLLSLPE 380
LA*LLLSRSENHPS PSISF LLQ* ALLIGPRQNPFHIQVFAYSI YLFPVHQLLSLP+
Sbjct: 509 LA*LLLSRSENHPSAPSISFLLLQ*SALLIGPRQNPFHIQVFAYSISYLFPVHQLLSLPD 330
Query: 379 EQFSPLHQY 353
EQFSPLHQY
Sbjct: 329 EQFSPLHQY 303
Score = 123 bits (264), Expect(2) = 7e-066
Identities = 53/61 (86%), Positives = 54/61 (88%)
Frame = -1 / -3
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRNP 116
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDAFPFQ LLRSPAEGAQRNP
Sbjct: 245 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDAFPFQCPHLLRSPAEGAQRNP 66
Query: 115 * 113
*
Sbjct: 65 * 63
Score = 101 bits (216), Expect(2) = 7e-066
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GGTPQE + LKWECIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 87 GGTPQEMRTLKWECIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 245
>gb|BE355453.1|BE355453 DG1_114_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 693
Score = 274 bits (592), Expect(3) = 5e-080
Identities = 118/140 (84%), Positives = 121/140 (86%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTGNR DEETIDDLIETGKSEQIFKDAIQHQGRGQIL TVAEIQERHDAVRDLERKLL
Sbjct: 7 FTVTGNRLDEETIDDLIETGKSEQIFKDAIQHQGRGQILYTVAEIQERHDAVRDLERKLL 186
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXX 948
ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGV+ALQ+AKKLQ+NSRKWMCY
Sbjct: 187 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVTALQSAKKLQKNSRKWMCYAII 366
Query: 949 XXXXXXXXXXXXXXQPWKKG 1008
QPWKKG
Sbjct: 367 LLLVIVVVIVVAVIQPWKKG 426
Score = 237 bits (512), Expect(3) = 5e-070
Identities = 102/141 (72%), Positives = 104/141 (73%)
Frame = -3 / -2
Query: 1007 PFFHGWXXXXXXXXXXXXXXXXXXXXHFLEFLCSFFAFWSALTPCCMWLVAFETWVSMLL 828
PFFHGW HFLEF CSFFA WSA+TPCCM LVAFET VSMLL
Sbjct: 425 PFFHGWMTATTMTTTITSSRMMA*HIHFLEFFCSFFALWSAVTPCCM*LVAFETCVSMLL 246
Query: 827 IMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 648
IMSP ASTRTAMSMNICCNS+SFLSRSLTASCRSCISATV SIWPLP*CWIASLNICSLF
Sbjct: 245 IMSP*ASTRTAMSMNICCNSKSFLSRSLTASCRSCISATVYSIWPLP*CWIASLNICSLF 66
Query: 647 PXXXXXXXXXXSGRLPVTVKT 585
P S RLPVTVKT
Sbjct: 65 PVSIKSSIVSSSRRLPVTVKT 3
Score = 226 bits (487), Expect(3) = 5e-064
Identities = 98/120 (81%), Positives = 102/120 (85%)
Frame = -2 / -1
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G+AHPLPRI LQFLR LE HTLLYV+GGVRDM LDVVDHVSL LNKNCHVHEY
Sbjct: 360 GIAHPLPRILLQFLRALECGHTLLYVIGGVRDMCLDVVDHVSLSLNKNCHVHEYLLQLQK 181
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNP 583
*IPYSIMSLLYFSN V YLASSLMLDSIFEYLLTFS LYQ+INCLFI+TITSYSKNP
Sbjct: 180 LPL*IPYSIMSLLYFSNCVQYLASSLMLDSIFEYLLTFSSLYQIINCLFIKTITSYSKNP 1
Score = 204 bits (440), Expect(4) = 1e-069
Identities = 94/120 (78%), Positives = 94/120 (78%)
Frame = +2 / +2
Query: 584 GFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIREEARY*TLLLKYRSDMML*GI*RGS 763
GFLL*LVIVLMKRQLM **R EKVSKYSKMLSNIREEARY T LLKYRSDMML*GI*RGS
Sbjct: 2 GFLL*LVIVLMKRQLMI**RLEKVSKYSKMLSNIREEARYCTQLLKYRSDMML*GI*RGS 181
Query: 764 FWSCNRYSWTWQFLLRRKEXXXXXXXXXXXXXXXXYSKV*ARSRTRRNCRGIRGSGCATP 943
FWSCNRYSWTWQFLLR KE YSKV* SR RRNCR IRGSGCA P
Sbjct: 182 FWSCNRYSWTWQFLLRLKET*STTSRHMSRTPPITYSKV*PHSRARRNCRRIRGSGCAMP 361
Score = 196 bits (423), Expect = 5e-049
Identities = 92/141 (65%), Positives = 94/141 (66%)
Frame = -1 / -3
Query: 1006 PSSMAG*LRRQ*PRLSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGWWXXXXXXXXXX 827
PSSMAG* RRQ*P LSPAV *W SHLAVC WW
Sbjct: 424 PSSMAG*PRRQ*PPLSPAVG*WHSTSTSSNSSAVSSRSGVRSHLAVCDWWRSRHVSRCC* 245
Query: 826 XCLLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAHFF 647
CLL PQQELPCP*ISVATP+ASSLDPLQHHVAPVFQQ C VSGLFPDVG*HL*IFAHFF
Sbjct: 244 SCLLEPQQELPCP*ISVATPKASSLDPLQHHVAPVFQQLCTVSGLFPDVG*HL*IFAHFF 65
Query: 646 RXXXXXXXXXXQDDYQLQ*KP 584
+ QDDYQLQ*KP
Sbjct: 64 QSLSNHQLSLHQDDYQLQ*KP 2
Score = 174 bits (374), Expect(3) = 3e-045
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3 / +3
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
KK*ANIQRCYPTSGKRPDT H C*NTGAT*CCKGSREEA GVATDIHGHGSSC*G+RRHD
Sbjct: 66 KK*ANIQRCYPTSGKRPDTVHSC*NTGAT*CCKGSREEAFGVATDIHGHGSSC*GSRRHD 245
Query: 828 QQHRDPCLERHQPHT 872
QQHRD CLERHQ HT
Sbjct: 246 QQHRDTCLERHQSHT 290
Score = 60.2 bits (125), Expect(4) = 1e-069
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3 / +3
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEEG 1007
VDVL HH TAGDS GHCRR HPAMEEG
Sbjct: 345 VDVLCHHPTAGDSGGHCRRGHPAMEEG 425
Score = 37.3 bits (75), Expect(3) = 5e-080
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 1088 LYL*STQQELWHFDSFCLVKG 1150
LYL ST Q+LWHF SFC+ G
Sbjct: 544 LYLWSTHQKLWHFYSFCVCGG 606
Score = 34.5 bits (69), Expect(3) = 5e-070
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 1137 QNESKCQSSCCVDYRYNN 1084
QNE KCQS CVD+RYN+
Sbjct: 593 QNE*KCQSF*CVDHRYND 540
Score = 34.1 bits (68), Expect(3) = 5e-070
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 1069 PQKKLHTYYTNRKK 1028
P KKLHTYYTN KK
Sbjct: 521 PHKKLHTYYTNSKK 480
Score = 32.2 bits (64), Expect(4) = 1e-069
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 1089 CTYSRRNRSSGISIHSV 1139
CTY R RS GISIHSV
Sbjct: 545 CTYGRHIRSFGISIHSV 595
Score = 31.3 bits (62), Expect(3) = 5e-064
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 1136 RMNRNARAPVASTIGTT 1086
RMNRNA+A STIGTT
Sbjct: 592 RMNRNAKASDVSTIGTT 542
Score = 28.6 bits (56), Expect(3) = 5e-064
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 1064 KKTAHILHKQEK 1029
+KTAHILHKQ+K
Sbjct: 516 QKTAHILHKQQK 481
Score = 28.6 bits (56), Expect(3) = 3e-045
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 585 GFYCNW*SS** 617
GFYCNW*SS**
Sbjct: 3 GFYCNW*SS** 35
Score = 28.1 bits (55), Expect(3) = 5e-080
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 1029 FFLFV*YVCSFFCG 1070
F LFV*YVCSF G
Sbjct: 481 FLLFV*YVCSFLWG 522
Score = 26.3 bits (51), Expect(4) = 1e-069
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 1030 FSCLCNMCA 1056
F CLCNMCA
Sbjct: 482 FCCLCNMCA 508
Score = 24.4 bits (47), Expect(3) = 3e-045
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 1093 PIVDATGALAFRFIL 1137
P+VD + ALAF FIL
Sbjct: 549 PMVDTSEALAFLFIL 593
>gb|CD224173.1|CD224173 CCC1_32_A06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_A06_A007 5', mRNA sequence
Length = 483
Score = 290 bits (628), Expect(2) = 2e-079
Identities = 128/137 (93%), Positives = 131/137 (95%)
Frame = +1 / +1
Query: 85 SLLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNL 264
S LAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIES+IAKL+NL
Sbjct: 73 SPLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESLIAKLTNL 252
Query: 265 LNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPG 444
LNKL TANEES VTKASSMKAIKQRMEKDIDEVGKIA QAKTKVDELE+DNL NRQKPG
Sbjct: 253 LNKLQTANEESKAVTKASSMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLLNRQKPG 432
Query: 445 CGKGSAVDRSREQTTGA 495
CGKGSAVDRSREQTTGA
Sbjct: 433 CGKGSAVDRSREQTTGA 483
Score = 263 bits (568), Expect = 5e-069
Identities = 112/132 (84%), Positives = 115/132 (87%)
Frame = -2 / -1
Query: 495 CXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGT 316
C SVHGRTLSTSRFLPI+*VI FQFINFCLCL SNFPHFINIFLHPLLNCFHGT
Sbjct: 483 CSSSLLS*SVHGRTLSTSRFLPIQ*VIFFQFINFCLCLTSNFPHFINIFLHPLLNCFHGT 304
Query: 315 CFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPP 136
CFCN GFLICS ELIQ*I QLCN TLNCIDLLQEI VV*SISLMHSHFN+ +S*GVPP
Sbjct: 303 CFCNCFGFLICSLELIQ*ICQLCN*TLNCIDLLQEIL*VV*SISLMHSHFNVRIS*GVPP 124
Query: 135 RELKGIREEVVH 100
RELKGIREEVVH
Sbjct: 123 RELKGIREEVVH 88
Score = 253 bits (547), Expect(2) = 1e-066
Identities = 110/134 (82%), Positives = 114/134 (85%)
Frame = +3 / +3
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQPPHGFL*APSAGLLKR +*NGNASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*
Sbjct: 81 RRHEQPPHGFL*APSAGLLKRCGH*NGNASG*CFRQLKGFLEEGRCN*EFNCKADKSIE* 260
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWK 452
AP CK*GI SYKSKFHESN*AADGERY**SGENC R* IE*AKTWMWK
Sbjct: 261 APDCK*GIQSSYKSKFHESN*AADGERY**SGENCSSGKDKS**TGKR*LIE*AKTWMWK 440
Query: 453 GFCRGPIKRANYWS 494
GFCRGPIKRA+YWS
Sbjct: 441 GFCRGPIKRADYWS 482
Score = 242 bits (523), Expect = 8e-063
Identities = 110/132 (83%), Positives = 112/132 (84%)
Frame = -3 / -2
Query: 494 APVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMEL 315
APVVCSLDRSTAEPFPHPGFCLF++LS SSSSTFVFA* AIFPTSSISFSIRCLIAFMEL
Sbjct: 482 APVVCSLDRSTAEPFPHPGFCLFNKLSFSSSSTFVFA*RAIFPTSSISFSIRCLIAFMEL 303
Query: 314 AFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRR 135
AFVT DSSFAVWSLFNRF SFAI LSIASTFFKKSFKL SLEESRR
Sbjct: 302 AFVTALDSSFAVWSLFNRFVSFAIKLSIASTFFKKSFKLSEASA*CIPISMSASLEESRR 123
Query: 134 GSSKESVRRLFM 99
GSSKESVRRLFM
Sbjct: 122 GSSKESVRRLFM 87
Score = 123 bits (264), Expect(2) = 1e-051
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +2 / +2
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLE 493
SSGWRKILMKWGKLL+RQRQKLMNWK+ITY IGKNLDVERVLPWTDQES+LLE
Sbjct: 323 SSGWRKILMKWGKLLVRQRQKLMNWKKITY*IGKNLDVERVLPWTDQESRLLE 481
Score = 123 bits (264), Expect(2) = 2e-053
Identities = 53/61 (86%), Positives = 54/61 (88%)
Frame = -1 / -3
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRNP 116
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDAFPFQ LLRSPAEGAQRNP
Sbjct: 283 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDAFPFQCPHLLRSPAEGAQRNP 104
Query: 115 * 113
*
Sbjct: 103 * 101
Score = 107 bits (229), Expect(2) = 2e-053
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -1 / -3
Query: 493 LQ*FALLIGPRQNPFHIQVFAYSIGYLFPVHQLLSLPEEQFSPLHQY 353
LQ* ALLIGPRQNPFHIQVFAYSI YLFPVHQLLSLP+EQFSPLHQY
Sbjct: 481 LQ*SALLIGPRQNPFHIQVFAYSISYLFPVHQLLSLPDEQFSPLHQY 341
Score = 101 bits (216), Expect(2) = 1e-051
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +2 / +2
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GGTPQE + LKWECIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 125 GGTPQEMRTLKWECIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 283
Score = 27.6 bits (54), Expect(2) = 2e-079
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 49 GLRSPRRPPA 78
GLRSPRRPPA
Sbjct: 19 GLRSPRRPPA 48
Score = 22.6 bits (43), Expect(2) = 1e-066
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 43 PAGLRSPRRPPACXSLLAA 99
PA RPPA SLLAA
Sbjct: 17 PASALLAARPPARLSLLAA 73
>gb|BF422269.1|BF422269 FM1_13_D07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 448
Score = 288 bits (624), Expect = 9e-077
Identities = 127/136 (93%), Positives = 130/136 (95%)
Frame = +1 / +3
Query: 85 SLLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNL 264
S LAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIES+IAKL+NL
Sbjct: 39 SPLAAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESLIAKLTNL 218
Query: 265 LNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPG 444
LNKL TANEES VTKASSMKAIKQRMEKDIDEVGKIA QAKTKVDELE+DNL NRQKPG
Sbjct: 219 LNKLQTANEESKAVTKASSMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLLNRQKPG 398
Query: 445 CGKGSAVDRSREQTTG 492
CGKGSAVDRSREQTTG
Sbjct: 399 CGKGSAVDRSREQTTG 446
Score = 267 bits (577), Expect = 3e-070
Identities = 111/123 (90%), Positives = 114/123 (92%)
Frame = -2 / -3
Query: 468 VHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFL 289
VHGRTLSTSRFLPI+*VI FQFINFCLCL SNFPHFINIFLHPLLNCFHGTCFCN GFL
Sbjct: 422 VHGRTLSTSRFLPIQ*VIFFQFINFCLCLTSNFPHFINIFLHPLLNCFHGTCFCNCFGFL 243
Query: 288 ICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGIREE 109
ICS ELIQ*I QLCN TLNCIDLLQEI VV*SISLMHSHFN+C+S*GVPPRELKGIREE
Sbjct: 242 ICSLELIQ*ICQLCN*TLNCIDLLQEIL*VV*SISLMHSHFNVCIS*GVPPRELKGIREE 63
Query: 108 VVH 100
VVH
Sbjct: 62 VVH 54
Score = 254 bits (550), Expect = 1e-066
Identities = 110/133 (82%), Positives = 114/133 (85%)
Frame = +3 / +2
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQPPHGFL*APSAGLLKR R+*NGNASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*
Sbjct: 47 RRHEQPPHGFL*APSAGLLKRCRH*NGNASG*CFRQLKGFLEEGRCN*EFNCKADKSIE* 226
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWK 452
AP CK*GI SYKSKFHESN*AADGERY**SGENC R* IE*AKTWMWK
Sbjct: 227 APDCK*GIQSSYKSKFHESN*AADGERY**SGENCSSGKDKS**TGKR*LIE*AKTWMWK 406
Query: 453 GFCRGPIKRANYW 491
GFCRGPIKRA+YW
Sbjct: 407 GFCRGPIKRADYW 445
Score = 240 bits (519), Expect = 3e-062
Identities = 109/131 (83%), Positives = 111/131 (84%)
Frame = -3 / -1
Query: 491 PVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELA 312
PVVCSLDRSTAEPFPHPGFCLF++LS SSSSTFVFA* AIFPTSSISFSIRCLIAFMELA
Sbjct: 445 PVVCSLDRSTAEPFPHPGFCLFNKLSFSSSSTFVFA*RAIFPTSSISFSIRCLIAFMELA 266
Query: 311 FVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRG 132
FVT DSSFAVWSLFNRF SFAI LSIASTFFKKSFKL SLEESRRG
Sbjct: 265 FVTALDSSFAVWSLFNRFVSFAIKLSIASTFFKKSFKLSEASA*CIPISMSASLEESRRG 86
Query: 131 SSKESVRRLFM 99
SSKESVRRLFM
Sbjct: 85 SSKESVRRLFM 53
Score = 127 bits (271), Expect(2) = 2e-054
Identities = 54/61 (88%), Positives = 55/61 (90%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRNP 116
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDAFPFQ L LLRSPAEGAQRNP
Sbjct: 249 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDAFPFQCLHLLRSPAEGAQRNP 70
Query: 115 * 113
*
Sbjct: 69 * 67
Score = 123 bits (264), Expect(2) = 3e-052
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +2 / +1
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLE 493
SSGWRKILMKWGKLL+RQRQKLMNWK+ITY IGKNLDVERVLPWTDQES+LLE
Sbjct: 289 SSGWRKILMKWGKLLVRQRQKLMNWKKITY*IGKNLDVERVLPWTDQESRLLE 447
Score = 107 bits (229), Expect(2) = 2e-054
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -1 / -2
Query: 493 LQ*FALLIGPRQNPFHIQVFAYSIGYLFPVHQLLSLPEEQFSPLHQY 353
LQ* ALLIGPRQNPFHIQVFAYSI YLFPVHQLLSLP+EQFSPLHQY
Sbjct: 447 LQ*SALLIGPRQNPFHIQVFAYSISYLFPVHQLLSLPDEQFSPLHQY 307
Score = 103 bits (220), Expect(2) = 3e-052
Identities = 48/53 (90%), Positives = 49/53 (92%)
Frame = +2 / +1
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GGTPQE Q LKWECIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 91 GGTPQEMQTLKWECIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 249
>gb|BF422211.1|BF422211 FM1_13_D07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 585
Score = 268 bits (579), Expect(3) = 2e-075
Identities = 114/135 (84%), Positives = 117/135 (86%)
Frame = +1 / +3
Query: 604 NRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQI 783
NRPDEETIDDLIETG SEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQI
Sbjct: 3 NRPDEETIDDLIETGXSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQI 182
Query: 784 FMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXX 963
FMDMAVLVEAQGDMINNIETHVSNATNHIQQGV+ALQ+AKKLQ+NSRKWMCY
Sbjct: 183 FMDMAVLVEAQGDMINNIETHVSNATNHIQQGVTALQSAKKLQKNSRKWMCYAIILLLVI 362
Query: 964 XXXXXXXXXQPWKKG 1008
QPWKKG
Sbjct: 363 VVVIVVAVIQPWKKG 407
Score = 230 bits (496), Expect(3) = 2e-068
Identities = 98/135 (72%), Positives = 100/135 (74%)
Frame = -3 / -3
Query: 1007 PFFHGWXXXXXXXXXXXXXXXXXXXXHFLEFLCSFFAFWSALTPCCMWLVAFETWVSMLL 828
PFFHGW HFLEF CSFFA WSA+TPCCM LVAFET VSMLL
Sbjct: 406 PFFHGWMTATTMTTTITSSRMMA*HIHFLEFFCSFFALWSAVTPCCM*LVAFETCVSMLL 227
Query: 827 IMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 648
IMSP ASTRTAMSMNICCNS+SFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF
Sbjct: 226 IMSP*ASTRTAMSMNICCNSKSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 47
Query: 647 PXXXXXXXXXXSGRL 603
P SGRL
Sbjct: 46 PVSIKSSIVSSSGRL 2
Score = 206 bits (445), Expect(3) = 4e-057
Identities = 91/113 (80%), Positives = 94/113 (83%)
Frame = -2 / -2
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G+AHPLPRI LQFLR LE HTLLYV+GGVRDM LDVVDHVSL LNKNCHVHEY
Sbjct: 341 GIAHPLPRILLQFLRALECGHTLLYVIGGVRDMCLDVVDHVSLSLNKNCHVHEYLLQLQK 162
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTI 604
*IPYSIMSLLYFSN V YLASSLMLDSIFEYLLT S LYQ+INCLFIRTI
Sbjct: 161 LPL*IPYSIMSLLYFSNCVQYLASSLMLDSIFEYLLTXSSLYQIINCLFIRTI 3
Score = 188 bits (404), Expect(4) = 7e-063
Identities = 86/114 (75%), Positives = 87/114 (76%)
Frame = +2 / +1
Query: 602 VIVLMKRQLMT**RPEKVSKYSKMLSNIREEARY*TLLLKYRSDMML*GI*RGSFWSCNR 781
VIVLMKRQLM **R E VSKYSKMLS+IREEARY T LLKYRSDMML*GI*RGSFWSCNR
Sbjct: 1 VIVLMKRQLMI**RLEXVSKYSKMLSSIREEARYWTQLLKYRSDMML*GI*RGSFWSCNR 180
Query: 782 YSWTWQFLLRRKEXXXXXXXXXXXXXXXXYSKV*ARSRTRRNCRGIRGSGCATP 943
YSWTWQFLLR KE YSKV* SR RRNCR IRGSGCA P
Sbjct: 181 YSWTWQFLLRLKET*STTSRHMSRTPPITYSKV*PHSRARRNCRRIRGSGCAMP 342
Score = 178 bits (383), Expect = 2e-043
Identities = 84/135 (62%), Positives = 86/135 (63%)
Frame = -1 / -1
Query: 1006 PSSMAG*LRRQ*PRLSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGWWXXXXXXXXXX 827
PSSMAG* RRQ*P LSPAV *W SHLAVC WW
Sbjct: 405 PSSMAG*PRRQ*PPLSPAVG*WHSTSTSSNSSAVSSRSGVRSHLAVCDWWRSRHVSRCC* 226
Query: 826 XCLLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAHFF 647
CLL PQQELPCP*ISVATP+ASSLDPLQHHVAPVFQQ C VSGLFPD G*HL*IFAH F
Sbjct: 225 SCLLEPQQELPCP*ISVATPKASSLDPLQHHVAPVFQQLCPVSGLFPDAG*HL*IFAHXF 46
Query: 646 RXXXXXXXXXXQDDY 602
+ QDDY
Sbjct: 45 QSLSNHQLSLHQDDY 1
Score = 169 bits (364), Expect = 7e-041
Identities = 67/75 (89%), Positives = 68/75 (90%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
K *ANIQRCYP SGKRPDT H C*NTGAT*CCKGSREEA GVATDIHGHGSSC*G+RRHD
Sbjct: 47 KX*ANIQRCYPASGKRPDTGHSC*NTGAT*CCKGSREEAFGVATDIHGHGSSC*GSRRHD 226
Query: 828 QQHRDPCLERHQPHT 872
QQHRD CLERHQ HT
Sbjct: 227 QQHRDTCLERHQSHT 271
Score = 60.2 bits (125), Expect(4) = 7e-063
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEEG 1007
VDVL HH TAGDS GHCRR HPAMEEG
Sbjct: 326 VDVLCHHPTAGDSGGHCRRGHPAMEEG 406
Score = 36.8 bits (74), Expect(3) = 2e-068
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / -3
Query: 1134 NESKCQSSCCVDYRYNN 1084
N S+CQS CCVD+RYN+
Sbjct: 571 NYSQCQSFCCVDHRYND 521
Score = 34.1 bits (68), Expect(3) = 2e-068
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 1069 PQKKLHTYYTNRKK 1028
P KKLHTYYTN KK
Sbjct: 502 PHKKLHTYYTNSKK 461
Score = 28.6 bits (56), Expect(3) = 4e-057
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -2
Query: 1064 KKTAHILHKQEK 1029
+KTAHILHKQ+K
Sbjct: 497 QKTAHILHKQQK 462
Score = 28.1 bits (55), Expect(3) = 2e-075
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 1029 FFLFV*YVCSFFCG 1070
F LFV*YVCSF G
Sbjct: 462 FLLFV*YVCSFLWG 503
Score = 27.6 bits (54), Expect(3) = 2e-075
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 1088 LYL*STQQELWH 1123
LYL STQQ+LWH
Sbjct: 525 LYLWSTQQKLWH 560
Score = 27.2 bits (53), Expect(3) = 4e-057
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -1
Query: 1127 RNARAPVASTIGTT 1086
RNA+A V STIGTT
Sbjct: 564 RNAKASVVSTIGTT 523
Score = 26.3 bits (51), Expect(4) = 7e-063
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1030 FSCLCNMCA 1056
F CLCNMCA
Sbjct: 463 FCCLCNMCA 489
Score = 25.8 bits (50), Expect(4) = 7e-063
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 1089 CTYSRRNRSSGIS 1127
CTY R NRS GI+
Sbjct: 526 CTYGRHNRSFGIA 564
>gb|CD224745.1|CD224745 CCC1_36_C07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_C07_A007 3', mRNA sequence
Length = 649
Score = 257 bits (555), Expect(3) = 2e-074
Identities = 110/131 (83%), Positives = 113/131 (86%)
Frame = +1 / +3
Query: 616 EETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDM 795
EETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDM
Sbjct: 3 EETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDM 182
Query: 796 AVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXXXXXX 975
AVLVEAQGDMINNIETHVSNA NHIQQGV+ALQ+AKKLQ+NSRKWMCY
Sbjct: 183 AVLVEAQGDMINNIETHVSNAPNHIQQGVAALQSAKKLQKNSRKWMCYAIILLLVIVVVI 362
Query: 976 XXXXXQPWKKG 1008
QPWKKG
Sbjct: 363 VVTVIQPWKKG 395
Score = 221 bits (476), Expect(3) = 4e-065
Identities = 93/121 (76%), Positives = 94/121 (77%)
Frame = -3 / -1
Query: 1007 PFFHGWXXXXXXXXXXXXXXXXXXXXHFLEFLCSFFAFWSALTPCCMWLVAFETWVSMLL 828
PFFHGW HFLEF CSFFA WSA TPCCM L AFET VSMLL
Sbjct: 394 PFFHGWMTVTTMTTTITSSRMMA*HIHFLEFFCSFFALWSAATPCCM*LGAFETCVSMLL 215
Query: 827 IMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 648
IMSP ASTRTAMSMNICCNS+SFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF
Sbjct: 214 IMSP*ASTRTAMSMNICCNSKSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 35
Query: 647 P 645
P
Sbjct: 34 P 32
Score = 201 bits (434), Expect(3) = 8e-057
Identities = 88/109 (80%), Positives = 91/109 (83%)
Frame = -2 / -3
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G+AHPLPRI LQFLR LE HTLLYV+GGVRDM LDVVDHVSL LNKNCHVHEY
Sbjct: 329 GIAHPLPRILLQFLRALECGHTLLYVIGGVRDMCLDVVDHVSLSLNKNCHVHEYLLQLQK 150
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLF 616
*IPYSIMSLLYFSN V YLASSLMLDSIFEYLLTFS LYQ+INCLF
Sbjct: 149 LPL*IPYSIMSLLYFSNCVQYLASSLMLDSIFEYLLTFSSLYQIINCLF 3
Score = 183 bits (394), Expect(4) = 9e-063
Identities = 83/110 (75%), Positives = 83/110 (75%)
Frame = +2 / +1
Query: 614 MKRQLMT**RPEKVSKYSKMLSNIREEARY*TLLLKYRSDMML*GI*RGSFWSCNRYSWT 793
MKRQLM **R EKVSKYSKMLSNIREEARY T LLKYRSDMML*GI*RGSFWSCNRYSWT
Sbjct: 1 MKRQLMI**RLEKVSKYSKMLSNIREEARYWTQLLKYRSDMML*GI*RGSFWSCNRYSWT 180
Query: 794 WQFLLRRKEXXXXXXXXXXXXXXXXYSKV*ARSRTRRNCRGIRGSGCATP 943
WQFLLR KE YSKV SR RRNCR IRGSGCA P
Sbjct: 181 WQFLLRLKET*STTSRHMSRTPPITYSKVWPHSRARRNCRRIRGSGCAMP 330
Score = 170 bits (365), Expect(2) = 2e-041
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
KK*ANIQRCYPTSGKRPDT H C*NTGAT*CCKGSREEA GVATDIHGHGSSC*G+RRHD
Sbjct: 35 KK*ANIQRCYPTSGKRPDTGHSC*NTGAT*CCKGSREEAFGVATDIHGHGSSC*GSRRHD 214
Query: 828 QQHRDPCLERHQPHT 872
QQHRD CLER Q HT
Sbjct: 215 QQHRDTCLERPQSHT 259
Score = 128 bits (275), Expect(2) = 2e-037
Identities = 54/59 (91%), Positives = 56/59 (94%)
Frame = -1 / -2
Query: 820 LLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAHFFR 644
LL PQQELPCP*ISVATP+ASSLDPLQHHVAPVFQQ C VSGLFPDVG*HL*IFAHFF+
Sbjct: 207 LLEPQQELPCP*ISVATPKASSLDPLQHHVAPVFQQLCPVSGLFPDVG*HL*IFAHFFQ 31
Score = 57.9 bits (120), Expect(4) = 9e-063
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +3 / +2
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEEG 1007
VDVL HH TAGDS GHCR HPAMEEG
Sbjct: 314 VDVLCHHPTAGDSGGHCRHGHPAMEEG 394
Score = 49.2 bits (101), Expect(2) = 2e-037
Identities = 24/49 (48%), Positives = 24/49 (48%)
Frame = -1 / -2
Query: 1006 PSSMAG*LRRQ*PRLSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGW 860
PSSMAG* RQ*P LSPAV *W HLAVC W
Sbjct: 393 PSSMAG*P*RQ*PPLSPAVG*WHSTSTSSNSSAVSSRSGVRPHLAVCDW 247
Score = 35.9 bits (72), Expect(3) = 2e-074
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 1088 LYL*STQQELWHFDSFCL 1141
LYL ST Q+LWHF SFC+
Sbjct: 513 LYLWSTHQKLWHFYSFCV 566
Score = 34.5 bits (69), Expect(3) = 4e-065
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 1137 QNESKCQSSCCVDYRYNN 1084
QNE KCQS CVD+RYN+
Sbjct: 562 QNE*KCQSF*CVDHRYND 509
Score = 34.1 bits (68), Expect(3) = 4e-065
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 1069 PQKKLHTYYTNRKK 1028
P KKLHTYYTN KK
Sbjct: 490 PHKKLHTYYTNSKK 449
Score = 32.2 bits (64), Expect(4) = 9e-063
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 1089 CTYSRRNRSSGISIHSV 1139
CTY R RS GISIHSV
Sbjct: 514 CTYGRHIRSFGISIHSV 564
Score = 31.3 bits (62), Expect(3) = 8e-057
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 1136 RMNRNARAPVASTIGTT 1086
RMNRNA+A STIGTT
Sbjct: 561 RMNRNAKASDVSTIGTT 511
Score = 28.6 bits (56), Expect(3) = 8e-057
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 1064 KKTAHILHKQEK 1029
+KTAHILHKQ+K
Sbjct: 485 QKTAHILHKQQK 450
Score = 28.1 bits (55), Expect(3) = 2e-074
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 1029 FFLFV*YVCSFFCG 1070
F LFV*YVCSF G
Sbjct: 450 FLLFV*YVCSFLWG 491
Score = 26.3 bits (51), Expect(4) = 9e-063
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1030 FSCLCNMCA 1056
F CLCNMCA
Sbjct: 451 FCCLCNMCA 477
Score = 24.4 bits (47), Expect(2) = 2e-041
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 1093 PIVDATGALAFRFIL 1137
P+VD + ALAF FIL
Sbjct: 518 PMVDTSEALAFLFIL 562
>gb|CW285864.1|CW285864 104_763_11410565_148_35505_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410565, DNA
sequence
Length = 619
Score = 122 bits (262), Expect(2) = 2e-046
Identities = 49/95 (51%), Positives = 68/95 (71%)
Frame = +1 / -3
Query: 532 QTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDT 711
Q LR + +TVTG +P++ TI+ LI +G+SE + AIQ QGRGQ++DT
Sbjct: 287 QGLRARMAAEYKETVARRYYTVTGEKPEDSTIEALISSGESESFLQKAIQEQGRGQVMDT 108
Query: 712 VAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQ 816
++EIQERHDAV+D+ER L++L Q+F+DMA LVEAQ
Sbjct: 107 ISEIQERHDAVKDIERSLMDLHQVFLDMAALVEAQ 3
Score = 85.4 bits (180), Expect(2) = 2e-046
Identities = 32/72 (44%), Positives = 52/72 (72%)
Frame = +1 / -3
Query: 319 SMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAV 498
++K+++ RM+KD+++V + A K K++EL+R N ++R+ PGCG GS+ DR+R +
Sbjct: 614 TVKSLRSRMDKDVEQVLRRAKAIKGKLEELDRSNATSRKVPGCGPGSSTDRTRTSVVAGL 435
Query: 499 KKKLKERMDDFQ 534
KKLK+ MDDFQ
Sbjct: 434 GKKLKDLMDDFQ 399
>gb|CD219759.1|CD219759 CCC1_58_B12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_58_B12_A007 5', mRNA sequence
Length = 649
Score = 187 bits (403), Expect = 3e-046
Identities = 77/89 (86%), Positives = 79/89 (88%)
Frame = -2 / -2
Query: 411 FQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLN 232
FQFINFCLCL SNFPHFINIFLHPLLNCFHGTCFCN GFLICS ELIQ*I QLCN TLN
Sbjct: 645 FQFINFCLCLTSNFPHFINIFLHPLLNCFHGTCFCNCFGFLICSLELIQ*ICQLCN*TLN 466
Query: 231 CIDLLQEIFQVV*SISLMHSHFNICVS*G 145
CIDLLQEI VV*SISLMH HFN+ +S*G
Sbjct: 465 CIDLLQEIL*VV*SISLMHPHFNVRIS*G 379
Score = 186 bits (401), Expect = 5e-046
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = +1 / +1
Query: 145 SSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSM 324
SSRDADIEMGMHQADASDNLKDFLKKVDAIES+IAKL+NLLNKL TANEES VTKASSM
Sbjct: 379 SSRDADIEMGMHQADASDNLKDFLKKVDAIESLIAKLTNLLNKLQTANEESKAVTKASSM 558
Query: 325 KAIKQRMEKDIDEVGKIAPQAKTKVDELER 414
KAIKQRMEKDIDEVGKIA QAKTKVDELE+
Sbjct: 559 KAIKQRMEKDIDEVGKIARQAKTKVDELEK 648
Score = 151 bits (325), Expect = 2e-035
Identities = 67/78 (85%), Positives = 71/78 (91%)
Frame = +3 / +3
Query: 144 LLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE*APXCK*GIXXSYKSKFH 323
LLKR +*NG+ASG*CFRQL+ FLEEGRCN*E+NCKA KSIE*AP CK*GI SYKSKFH
Sbjct: 378 LLKRCGH*NGDASG*CFRQLKGFLEEGRCN*EFNCKADKSIE*APDCK*GIQSSYKSKFH 557
Query: 324 ESN*AADGERY**SGENC 377
ESN*AADGERY**SGENC
Sbjct: 558 ESN*AADGERY**SGENC 611
Score = 144 bits (310), Expect = 2e-033
Identities = 70/89 (78%), Positives = 70/89 (78%)
Frame = -3 / -3
Query: 410 SSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSI 231
SSSSTFVFA* AIFPTSSISFSIRCLIAFMELAFVT DSSFAVWSLFNRF SFAI LSI
Sbjct: 644 SSSSTFVFA*RAIFPTSSISFSIRCLIAFMELAFVTALDSSFAVWSLFNRFVSFAIKLSI 465
Query: 230 ASTFFKKSFKLXXXXXXXXXXXXXXSLEE 144
ASTFFKKSFKL SLEE
Sbjct: 464 ASTFFKKSFKLSEASA*CIPISMSASLEE 378
Score = 95.5 bits (202), Expect(2) = 1e-028
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = -1 / -1
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLR 146
IPHLQ GAYSIDL+ALQL SQLHRPSSRN SCLKHQPDA PFQ LLR
Sbjct: 529 IPHLQSGAYSIDLSALQLNSQLHRPSSRNPLSCLKHQPDASPFQCPHLLR 380
Score = 90.9 bits (192), Expect(2) = 2e-031
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = +2 / +2
Query: 146 PQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
PQE + LKW CIRLMLQTT*+IS*RRSMQLRV*LQS QIY*ISS LQMRN
Sbjct: 380 PQEMRTLKWGCIRLMLQTT*RIS*RRSMQLRV*LQS*QIY*ISSRLQMRN 529
Score = 67.5 bits (141), Expect(2) = 2e-031
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2 / +2
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKE 415
SSGWRKILMKWGKLL+RQRQKLMNWK+
Sbjct: 569 SSGWRKILMKWGKLLVRQRQKLMNWKK 649
Score = 53.3 bits (110), Expect(2) = 1e-028
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 415 LFPVHQLLSLPEEQFSPLHQY 353
LFPVHQLLSLP+EQFSPLHQY
Sbjct: 649 LFPVHQLLSLPDEQFSPLHQY 587
>gb|BE918387.1|BE918387 OV1_3_A02.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 680
Score = 183 bits (395), Expect = 4e-045
Identities = 74/169 (43%), Positives = 113/169 (66%)
Frame = +1 / +2
Query: 430 RQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNR 609
R GC +G+ +DR+R T ++KKLK+ M DFQ LR+ + +T+TG
Sbjct: 26 RLSAGCREGTPLDRTRTAVTAGLRKKLKDLMLDFQALRQRMMSEYKETVERRYYTLTGEV 205
Query: 610 PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFM 789
P+EE I+ +I G+ E++ A+ G+G +L V EIQ+RHDA R++ER LLEL Q+F+
Sbjct: 206 PEEEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVFL 385
Query: 790 DMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
DMAV+VE QG+ +++IE+HV+NA++++Q G L AK+ QR+SRK +C
Sbjct: 386 DMAVMVEMQGEKLDDIESHVANASHYVQSGNKELGKAKEYQRSSRKCLC 532
>gb|CW028654.1|CW028654 104_255_10499222_116_30393 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499222, DNA
sequence
Length = 830
Score = 182 bits (391), Expect = 1e-044
Identities = 73/169 (43%), Positives = 113/169 (66%)
Frame = +1 / +2
Query: 430 RQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNR 609
R GC +G+ +DR+R T ++KKLK+ M DFQ LR+ + +T+TG
Sbjct: 302 RLSAGCREGTPLDRTRTAVTAGLRKKLKDLMLDFQALRQRMMSEYKETVERRYYTLTGEV 481
Query: 610 PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFM 789
P+EE I+ +I G+ E++ A+ G+G +L V EIQ+RHDA R++ER LLEL Q+F+
Sbjct: 482 PEEEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVFL 661
Query: 790 DMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
DMAV+VE QG+ +++IE+HV+NA++++Q G L A++ QR+SRK +C
Sbjct: 662 DMAVMVEMQGEKLDDIESHVANASHYVQSGNKELGKAQEYQRSSRKCLC 808
>gb|CW273362.1|CW273362 104_745_11403854_148_35717_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403854, DNA
sequence
Length = 641
Score = 173 bits (373), Expect = 4e-042
Identities = 66/135 (48%), Positives = 101/135 (74%)
Frame = +1 / -3
Query: 532 QTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDT 711
Q LR + +TVTG +P++ TI+ LI +G+SE + AIQ QGRGQ++DT
Sbjct: 564 QGLRARMAAEYKETVARRYYTVTGEKPEDSTIEALISSGESESFLQKAIQEQGRGQVMDT 385
Query: 712 VAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSAL 891
++EIQERHDAV+D+ER L++L Q+F+DMA LVEAQG +N+IE+HV++A++ +++G L
Sbjct: 384 ISEIQERHDAVKDIERSLMDLHQVFLDMAALVEAQGHQLNDIESHVAHASSFVRRGTVEL 205
Query: 892 QNAKKLQRNSRKWMC 936
++A++ Q++SRKWMC
Sbjct: 204 ESAREYQKSSRKWMC 160
>gb|CW273361.1|CW273361 104_745_11403854_148_35359_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403854, DNA
sequence
Length = 517
Score = 173 bits (372), Expect = 5e-042
Identities = 63/116 (54%), Positives = 97/116 (83%)
Frame = +1 / -2
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
+TVTG +P++ TI+ LI +G+SE + AIQ QGRGQ++DT++EIQERHDAV+D+ER L+
Sbjct: 507 YTVTGEKPEDSTIEALISSGESESFLQKAIQEQGRGQVMDTISEIQERHDAVKDIERSLM 328
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
+L Q+F+DMA LVEAQG +N+IE+HV++A++ +++G L++A++ Q++SRKWMC
Sbjct: 327 DLHQVFLDMAALVEAQGHQLNDIESHVAHASSFVRRGTVELESAREYQKSSRKWMC 160
>gb|BG933290.1|BG933290 WS1_92_F03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 724
Score = 155 bits (332), Expect = 2e-036
Identities = 65/116 (56%), Positives = 86/116 (74%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG +PDE T+D L E+G+ E+ + AI QGRGQ+L VAEIQERH AV +LER LL
Sbjct: 40 FTVTGTQPDEATLDALAESGEGERFLQRAIAEQGRGQVLGVVAEIQERHGAVAELERSLL 219
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
ELQQ+F DMAVLV AQG+ +++IE +V A + + +G LQ A+K Q+++RKW C
Sbjct: 220 ELQQVFNDMAVLVAAQGEQLDDIEGNVGRARSFVDRGREQLQVARKHQKSTRKWTC 387
>gb|CN126431.1|CN126431 RHOH1_17_D03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_17_D03_A002 3', mRNA sequence
Length = 726
Score = 152 bits (327), Expect = 8e-036
Identities = 64/116 (55%), Positives = 85/116 (73%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG +PDE T+D L E+G+ E+ + AI QGRGQ+L VAEIQERH AV +LER LL
Sbjct: 31 FTVTGTQPDEATLDALAESGEGERFLQRAIAEQGRGQVLGVVAEIQERHGAVAELERSLL 210
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
ELQQ+F DM VLV AQG+ +++IE +V A + + +G LQ A+K Q+++RKW C
Sbjct: 211 ELQQVFNDMPVLVAAQGEQLDDIEGNVGRARSFVDRGREQLQVARKPQKSTRKWTC 378
>gb|CD429977.1|CD429977 ETH1_16_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_D08_A002 5', mRNA sequence
Length = 613
Score = 134 bits (288), Expect(2) = 4e-033
Identities = 59/111 (53%), Positives = 80/111 (72%)
Frame = +1 / +1
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
+ A + F ++V IE+++ L+ LL L NEES VTKAS+MK +K+RMEKD++E
Sbjct: 280 SSAQPGFEGFYEQVKEIENLLNTLTKLLKDLQNPNEESKVVTKASAMKEVKKRMEKDVNE 459
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKE 516
V KIA AK+KV++L +DN +NR+KPG GKGS VDRSR TT A+ KKL+E
Sbjct: 460 VTKIARLAKSKVEQLNKDNAANREKPGFGKGSGVDRSRTTTTVALTKKLRE 612
Score = 29.0 bits (57), Expect(2) = 4e-033
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 100 MNNLLTDSFELPRRDSS 150
M NLLTDSFEL +R+ +
Sbjct: 184 MRNLLTDSFELGKREQA 234
>gb|BF587811.1|BF587811 FM1_40_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 654
Score = 141 bits (303), Expect = 2e-032
Identities = 55/116 (47%), Positives = 85/116 (73%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
+T+TG P+EE I+ +I G+ E++ A+ G+G +L V EIQ+ HDA R++ER LL
Sbjct: 34 YTLTGEVPEEEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDCHDAAREVERSLL 213
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
EL Q+F+DMAV+VE QG+ +++IE+HV+NA++++Q G L AK+ QR+SRK +C
Sbjct: 214 ELHQVFLDMAVMVEMQGEKLDDIESHVANASHYVQSGNKELGKAKEYQRSSRKCLC 381
>gb|BF588366.1|BF588366 FM1_40_G12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 552
Score = 141 bits (303), Expect = 2e-032
Identities = 55/116 (47%), Positives = 85/116 (73%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
+T+TG P+EE I+ +I G+ E++ A+ G+G +L V EIQ+ HDA R++ER LL
Sbjct: 34 YTLTGEVPEEEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDCHDAAREVERSLL 213
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
EL Q+F+DMAV+VE QG+ +++IE+HV+NA++++Q G L AK+ QR+SRK +C
Sbjct: 214 ELHQVFLDMAVMVEMQGEKLDDIESHVANASHYVQSGNKELGKAKEYQRSSRKCLC 381
>gb|CN126515.1|CN126515 RHOH1_17_D03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_17_D03_A002 5', mRNA sequence
Length = 713
Score = 132 bits (283), Expect = 1e-029
Identities = 58/171 (33%), Positives = 92/171 (53%)
Frame = +1 / +3
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A A +L F + V++I+ + L + L NE + AS+++ ++ RM+ D+
Sbjct: 198 AAAGASLDRFFEDVESIKDELRDLERIQRSLHDGNEAGKSLHDASAVRDLRARMDADVSA 377
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N +NR PGCG GS+ DR+R ++KKL++ M+ F +LR
Sbjct: 378 AIKKAKVVKLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLR 557
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRG 696
+ FTVTG +PDE T+D L E G+ E+ + A QGRG
Sbjct: 558 SRVASEYRDTVARRYFTVTGTQPDEATLDALAEYGEGERFLQRANAEQGRG 710
>gb|CW217465.1|CW217465 104_650_11195670_148_37131_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195670, DNA
sequence
Length = 720
Score = 115 bits (245), Expect(2) = 2e-029
Identities = 45/83 (54%), Positives = 64/83 (77%)
Frame = +1 / +1
Query: 688 GRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNH 867
GR Q++DTV+EIQER DAV ++ER L EL Q+F+DMA LVEAQG +N+IE+HV+ A++
Sbjct: 202 GRAQVVDTVSEIQERRDAVVEVERSLRELHQVFLDMAALVEAQGHQLNDIESHVARASSF 381
Query: 868 IQQGVSALQNAKKLQRNSRKWMC 936
+ +G L+ A++ QR+ RKW C
Sbjct: 382 VLRGAVELEAAREYQRSGRKWAC 450
Score = 36.3 bits (73), Expect(2) = 2e-029
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1 / +1
Query: 532 QTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQ 687
Q LR + +TVTG E T++ LI +G+SE + AIQ Q
Sbjct: 34 QGLRTRMAAEYKETVARRYYTVTGEEAAEGTVEALIASGQSETFLQKAIQEQ 189
>gb|CW288695.1|CW288695 104_767_11412087_116_35543_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412087, DNA
sequence
Length = 499
Score = 118 bits (253), Expect = 1e-025
Identities = 46/88 (52%), Positives = 68/88 (77%)
Frame = +1 / -2
Query: 673 AIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVS 852
A+ G+G +L V EIQ+RHDA R++ER LLEL Q+F+DMAV+VE QG+ +++IE+HV+
Sbjct: 489 AVAEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVFLDMAVMVEMQGEKLDDIESHVA 310
Query: 853 NATNHIQQGVSALQNAKKLQRNSRKWMC 936
NA++++Q G L AK+ QR+SRK +C
Sbjct: 309 NASHYVQSGNKELGKAKEYQRSSRKCLC 226
>gb|CX610629.1|CX610629 ANR1_19_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_H04_A002 5', mRNA sequence
Length = 705
Score = 115 bits (246), Expect = 1e-024
Identities = 50/151 (33%), Positives = 81/151 (53%)
Frame = +1 / +3
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A A +L F + V++I+ + L + L NE + AS+++ ++ RM+ D+
Sbjct: 249 AAAGASLDRFFEDVESIKDELRDLERIQRSLHDGNEAGKSLHDASAVRDLRARMDADVSA 428
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N +NR PGCG GS+ DR+R ++KKL++ M+ F +LR
Sbjct: 429 AIKKARVVKLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLR 608
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDL 636
+ FTVTG +PDE T+D L
Sbjct: 609 SRVASEYRDTVARRYFTVTGTQPDEATLDAL 701
>gb|CW060871.1|CW060871 104_304_10520092_114_30143 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10520092, DNA
sequence
Length = 487
Score = 115 bits (245), Expect = 2e-024
Identities = 45/83 (54%), Positives = 64/83 (77%)
Frame = +1 / +2
Query: 688 GRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNH 867
GR Q++DTV+EIQER DAV ++ER L EL Q+F+DMA LVEAQG +N+IE+HV+ A++
Sbjct: 23 GRAQVVDTVSEIQERRDAVVEVERSLRELHQVFLDMAALVEAQGHQLNDIESHVARASSF 202
Query: 868 IQQGVSALQNAKKLQRNSRKWMC 936
+ +G L+ A++ QR+ RKW C
Sbjct: 203 VLRGAVELEAAREYQRSGRKWAC 271
>gb|CW217464.1|CW217464 104_650_11195670_116_37132_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195670, DNA
sequence
Length = 638
Score = 115 bits (245), Expect = 2e-024
Identities = 45/83 (54%), Positives = 64/83 (77%)
Frame = +1 / -1
Query: 688 GRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNH 867
GR Q++DTV+EIQER DAV ++ER L EL Q+F+DMA LVEAQG +N+IE+HV+ A++
Sbjct: 587 GRAQVVDTVSEIQERRDAVVEVERSLRELHQVFLDMAALVEAQGHQLNDIESHVARASSF 408
Query: 868 IQQGVSALQNAKKLQRNSRKWMC 936
+ +G L+ A++ QR+ RKW C
Sbjct: 407 VLRGAVELEAAREYQRSGRKWAC 339
>gb|CW471098.1|CW471098 fsbb001f224m06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f224m06, DNA
sequence
Length = 505
Score = 115 bits (245), Expect = 2e-024
Identities = 45/83 (54%), Positives = 64/83 (77%)
Frame = +1 / -3
Query: 688 GRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNH 867
GR Q++DTV+EIQER DAV ++ER L EL Q+F+DMA LVEAQG +N+IE+HV+ A++
Sbjct: 407 GRAQVVDTVSEIQERRDAVVEVERSLRELHQVFLDMAALVEAQGHQLNDIESHVARASSF 228
Query: 868 IQQGVSALQNAKKLQRNSRKWMC 936
+ +G L+ A++ QR+ RKW C
Sbjct: 227 VLRGAVELEAAREYQRSGRKWAC 159
>gb|CW095235.1|CW095235 104_460_11001185_116_34421_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001185, DNA
sequence
Length = 658
Score = 87.2 bits (184), Expect(2) = 4e-022
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +1 / +1
Query: 118 DSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKV 225
DSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKV
Sbjct: 247 DSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKV 354
Score = 42.3 bits (86), Expect(2) = 4e-022
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +1
Query: 222 GRCN*EYNCKAVKSIE*AP 278
GRCN*E+NCKA KSIE*AP
Sbjct: 499 GRCN*EFNCKADKSIE*AP 555
>gb|CW206373.1|CW206373 104_635_11187557_148_36963_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187557, DNA
sequence
Length = 561
Score = 106 bits (227), Expect = 5e-022
Identities = 41/73 (56%), Positives = 60/73 (82%)
Frame = +1 / +2
Query: 718 EIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQN 897
EIQ+RHDA R++ER LLEL Q+F+DMAV+VE QG+ +++IE+HV+NA++++Q G L
Sbjct: 32 EIQDRHDAAREVERSLLELHQVFLDMAVMVEMQGEKLDDIESHVANASHYVQSGNKELGK 211
Query: 898 AKKLQRNSRKWMC 936
AK+ QR+SRK +C
Sbjct: 212 AKEYQRSSRKCLC 250
>gb|CW098069.1|CW098069 104_464_11002806_116_34361_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002806, DNA
sequence
Length = 676
Score = 106 bits (226), Expect = 7e-022
Identities = 43/112 (38%), Positives = 71/112 (63%)
Frame = +1 / -2
Query: 199 NLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIA 378
NL F + V+A++ + L + L + NEE+ A ++K+++ RM+KD+++V + A
Sbjct: 540 NLDKFFEDVEAVKEDMRGLEGMYKGLQSTNEETKTAHDARTVKSLRSRMDKDVEQVLRRA 361
Query: 379 PQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQ 534
K K++EL+R N ++R+ PGCG GS+ DR+R + KKLK+ MDDFQ
Sbjct: 360 KAIKGKLEELDRSNATSRKVPGCGPGSSTDRTRTSVVAGLGKKLKDLMDDFQ 205
>gb|CW285863.1|CW285863 104_763_11410565_116_35509_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410565, DNA
sequence
Length = 490
Score = 106 bits (226), Expect = 7e-022
Identities = 43/112 (38%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 199 NLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIA 378
NL F + V+A++ + L + L + NEE+ A ++K+++ RM+KD+++V + A
Sbjct: 76 NLDKFFQDVEAVKEDMRGLEGMYQGLQSTNEETKTAHDARTVKSLRSRMDKDVEQVLRRA 255
Query: 379 PQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQ 534
K K++EL+R N ++R+ PGCG GS+ DR+R + KKLK+ MDDFQ
Sbjct: 256 KAIKGKLEELDRSNATSRKVPGCGPGSSTDRTRTSVVAGLGKKLKDLMDDFQ 411
>gb|BZ368144.1|BZ368144 id11f06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id11f06 5', DNA sequence
Length = 672
Score = 52.8 bits (109), Expect(3) = 8e-022
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +1 / -1
Query: 697 QILDTVAEIQERHDAVRDLERKLLELQQI 783
++LDT+ EIQERHD V+++ERKLL+LQQ+
Sbjct: 666 RVLDTLQEIQERHDTVKEIERKLLDLQQV 580
Score = 48.3 bits (99), Expect(3) = 8e-022
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1 / -1
Query: 841 THVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
T V+ A HI+ G LQ+AKKLQ+N+RKW C
Sbjct: 204 TQVTGAAEHIKTGTIHLQDAKKLQKNTRKWTC 109
Score = 46.4 bits (95), Expect(3) = 8e-022
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1 / -3
Query: 766 LELQQIFMDMAVLVEAQGDMINNIETHV 849
L QIF D+AVLVEAQG+M++NIET V
Sbjct: 517 LPCMQIFQDLAVLVEAQGEMLDNIETQV 434
>gb|CW108236.1|CW108236 104_478_11097033_116_34485_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11097033, DNA
sequence
Length = 711
Score = 52.4 bits (108), Expect(3) = 1e-021
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +1 / +1
Query: 700 ILDTVAEIQERHDAVRDLERKLLELQQI 783
+LDT+ EIQERHD V+++ERKLL+LQQ+
Sbjct: 43 VLDTLQEIQERHDTVKEIERKLLDLQQV 126
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1 / +1
Query: 841 THVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
T V+ A HI+ G LQ+AKKLQ+N+RKW C
Sbjct: 502 TQVTGAAEHIKTGTIHLQDAKKLQKNTRKWTC 597
Score = 46.4 bits (95), Expect(3) = 1e-021
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 766 LELQQIFMDMAVLVEAQGDMINNIETHV 849
L QIF D+AVLVEAQG+M++NIET V
Sbjct: 189 LPCMQIFQDLAVLVEAQGEMLDNIETQV 272
>gb|BZ367867.1|BZ367867 id07a07.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id07a07 5', DNA sequence
Length = 723
Score = 52.4 bits (108), Expect(3) = 1e-021
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +1 / -2
Query: 700 ILDTVAEIQERHDAVRDLERKLLELQQI 783
+LDT+ EIQERHD V+++ERKLL+LQQ+
Sbjct: 653 VLDTLQEIQERHDTVKEIERKLLDLQQV 570
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1 / -2
Query: 841 THVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
T V+ A HI+ G LQ+AKKLQ+N+RKW C
Sbjct: 194 TQVTGAAEHIKTGTIHLQDAKKLQKNTRKWTC 99
Score = 46.4 bits (95), Expect(3) = 1e-021
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1 / -1
Query: 766 LELQQIFMDMAVLVEAQGDMINNIETHV 849
L QIF D+AVLVEAQG+M++NIET V
Sbjct: 507 LPCMQIFQDLAVLVEAQGEMLDNIETQV 424
>gb|CW496502.1|CW496502 fsbb001f288m17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288m17, DNA
sequence
Length = 738
Score = 52.4 bits (108), Expect(3) = 1e-021
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +1 / -3
Query: 700 ILDTVAEIQERHDAVRDLERKLLELQQI 783
+LDT+ EIQERHD V+++ERKLL+LQQ+
Sbjct: 655 VLDTLQEIQERHDTVKEIERKLLDLQQV 572
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1 / -3
Query: 841 THVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
T V+ A HI+ G LQ+AKKLQ+N+RKW C
Sbjct: 196 TQVTGAAEHIKTGTIHLQDAKKLQKNTRKWTC 101
Score = 46.4 bits (95), Expect(3) = 1e-021
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1 / -2
Query: 766 LELQQIFMDMAVLVEAQGDMINNIETHV 849
L QIF D+AVLVEAQG+M++NIET V
Sbjct: 509 LPCMQIFQDLAVLVEAQGEMLDNIETQV 426
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,260,993,802
Number of Sequences: 832831
Number of extensions: 17206364
Number of successful extensions: 121714
Number of sequences better than 1.0e-020: 41
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 40113489340
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)